Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
19:57:23 (3057553): wrapper (7.7.26015): starting
19:57:23 (3057553): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 19:57:23] Arguments: --nthreads 4
[2024-05-18 19:57:23] Threads: 4
[2024-05-18 19:57:23] Checking for CVMFS
[2024-05-18 19:57:23] No cvmfs_config command found, will try listing directly
[2024-05-18 19:57:23] CVMFS is ok
[2024-05-18 19:57:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 19:57:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 19:57:23] Further information can be found at the LHC@home message board.
[2024-05-18 19:57:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 19:57:23] Checking for apptainer binary...
[2024-05-18 19:57:23] which: no apptainer in ((null))
[2024-05-18 19:57:23] apptainer is not installed, using version from CVMFS
[2024-05-18 19:57:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 19:57:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-18 19:57:24] apptainer works
[2024-05-18 19:57:24] Set ATHENA_PROC_NUMBER=4
[2024-05-18 19:57:24] Set ATHENA_CORE_NUMBER=4
[2024-05-18 19:57:24] Starting ATLAS job with PandaID=6205818393
[2024-05-18 19:57:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:34:22 (480593): wrapper (7.7.26015): starting
01:34:22 (480593): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 01:34:22] Arguments: --nthreads 4
[2024-05-19 01:34:22] Threads: 4
[2024-05-19 01:34:22] This job has been restarted, cleaning up previous attempt
[2024-05-19 01:34:22] Checking for CVMFS
[2024-05-19 01:34:22] No cvmfs_config command found, will try listing directly
[2024-05-19 01:34:22] CVMFS is ok
[2024-05-19 01:34:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 01:34:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 01:34:22] Further information can be found at the LHC@home message board.
[2024-05-19 01:34:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 01:34:22] Checking for apptainer binary...
[2024-05-19 01:34:22] which: no apptainer in ((null))
[2024-05-19 01:34:22] apptainer is not installed, using version from CVMFS
[2024-05-19 01:34:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 01:34:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-19 01:34:23] apptainer works
[2024-05-19 01:34:23] Set ATHENA_PROC_NUMBER=4
[2024-05-19 01:34:23] Set ATHENA_CORE_NUMBER=4
[2024-05-19 01:34:23] Starting ATLAS job with PandaID=6205818393
[2024-05-19 01:34:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 01:37:31] Job failed
[2024-05-19 01:37:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-19 01:37:31] ++ pwd
[2024-05-19 01:37:31] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot56/slots/1/
[2024-05-19 01:37:31] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot56/slots/1/
[2024-05-19 01:37:31] + mv ATLAS.root_0 EVNT.38776140._000025.pool.root.1
[2024-05-19 01:37:31] mv: 'ATLAS.root_0' and 'EVNT.38776140._000025.pool.root.1' are the same file
[2024-05-19 01:37:31] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-19 01:37:31] + umask 077
[2024-05-19 01:37:31] ++ date +%s
[2024-05-19 01:37:31] + ACCOUNTING_STARTTIME=1716075263
[2024-05-19 01:37:31] + echo 'Detecting resource accounting method available for the job.'
[2024-05-19 01:37:31] Detecting resource accounting method available for the job.
[2024-05-19 01:37:31] + JOB_ACCOUNTING=
[2024-05-19 01:37:31] + command -v arc-job-cgroup
[2024-05-19 01:37:31] + '[' -z '' ']'
[2024-05-19 01:37:31] + GNU_TIME=/usr/bin/time
[2024-05-19 01:37:31] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-19 01:37:31] Looking for /usr/bin/time tool for accounting measurements
[2024-05-19 01:37:31] + '[' '!' -z /usr/bin/time ']'
[2024-05-19 01:37:31] + /usr/bin/time --version
[2024-05-19 01:37:31] + echo 'GNU time found and will be used for job accounting.'
[2024-05-19 01:37:31] GNU time found and will be used for job accounting.
[2024-05-19 01:37:31] + JOB_ACCOUNTING=gnutime
[2024-05-19 01:37:31] + '[' -z gnutime ']'
[2024-05-19 01:37:31] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-19 01:37:31] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-19 01:37:31] + export GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-13/BOINC_MCORE/6205818393.out
[2024-05-19 01:37:31] + GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-13/BOINC_MCORE/6205818393.out
[2024-05-19 01:37:31] + export PILOT_NOKILL=YES
[2024-05-19 01:37:31] + PILOT_NOKILL=YES
[2024-05-19 01:37:31] + export GRID_GLOBAL_JOBID=3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm
[2024-05-19 01:37:31] + GRID_GLOBAL_JOBID=3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm
[2024-05-19 01:37:31] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm
[2024-05-19 01:37:31] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm
[2024-05-19 01:37:31] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-19 01:37:31] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-19 01:37:31] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-19 01:37:31] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-19 01:37:31] ++ pwd
[2024-05-19 01:37:31] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot56/slots/1
[2024-05-19 01:37:31] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-19 01:37:31] ++ pwd
[2024-05-19 01:37:31] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot56/slots/1/log.38776146._000608.job.log.1
[2024-05-19 01:37:31] ++ pwd
[2024-05-19 01:37:31] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot56/slots/1/log.38776146._000608.job.log.1
[2024-05-19 01:37:31] ++ pwd
[2024-05-19 01:37:31] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot56/slots/1.diag
[2024-05-19 01:37:31] + '[' '!' -z '' ']'
[2024-05-19 01:37:31] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-19 01:37:31] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-19 01:37:31] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-19 01:37:31] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-19 01:37:31] + '[' '!' -z '' ']'
[2024-05-19 01:37:31] + '[' -z yes ']'
[2024-05-19 01:37:31] ++ pwd
[2024-05-19 01:37:31] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot56/slots/1/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm.diag
[2024-05-19 01:37:31] + runtimeenvironments=
[2024-05-19 01:37:31] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-19 01:37:31] + RTE_function_0 1
[2024-05-19 01:37:31] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 01:37:31] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 01:37:31] + export BOINC_APP=ATLAS
[2024-05-19 01:37:31] + BOINC_APP=ATLAS
[2024-05-19 01:37:31] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 01:37:31] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 01:37:31] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 01:37:31] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 01:37:31] + '[' -z 1 ']'
[2024-05-19 01:37:31] + '[' 1 == 1 ']'
[2024-05-19 01:37:31] + shift
[2024-05-19 01:37:31] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-19 01:37:31] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 01:37:31] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-19 01:37:31] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot56/slots/1/
[2024-05-19 01:37:31] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot56/slots/1/
[2024-05-19 01:37:31] + '[' -e /scratch/boinc/var/slot56/slots/1/init_data.xml ']'
[2024-05-19 01:37:31] + grep '<use_http_proxy/>' /scratch/boinc/var/slot56/slots/1/init_data.xml
[2024-05-19 01:37:31] + '[' -e /scratch/boinc/var/slot56/slots/1/init_data.xml ']'
[2024-05-19 01:37:31] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot56/slots/1/init_data.xml
[2024-05-19 01:37:31] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-19 01:37:31] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 01:37:31] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-19 01:37:31] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 01:37:31] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 01:37:31] + '[' 0 -ne 0 ']'
[2024-05-19 01:37:31] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-19 01:37:31] + '[' -f /etc/os-release ']'
[2024-05-19 01:37:31] +++ cat /etc/os-release
[2024-05-19 01:37:31] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-19 01:37:31] +++ NAME='CentOS Linux'
[2024-05-19 01:37:31] +++ VERSION='7 (Core)'
[2024-05-19 01:37:31] +++ ID=centos
[2024-05-19 01:37:31] +++ ID_LIKE='rhel fedora'
[2024-05-19 01:37:31] +++ VERSION_ID=7
[2024-05-19 01:37:31] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-19 01:37:31] +++ ANSI_COLOR='0;31'
[2024-05-19 01:37:31] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-19 01:37:31] +++ HOME_URL=https://www.centos.org/
[2024-05-19 01:37:31] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-19 01:37:31] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-19 01:37:31] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-19 01:37:31] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-19 01:37:31] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-19 01:37:31] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-19 01:37:31] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-19 01:37:31] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-19 01:37:31] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-19 01:37:31] + HOME=/scratch/boinc/var/slot56/slots/1
[2024-05-19 01:37:31] + export HOME
[2024-05-19 01:37:31] + cd /scratch/boinc/var/slot56/slots/1
[2024-05-19 01:37:31] + '[' '!' -z '' ']'
[2024-05-19 01:37:31] + '[' -z '' ']'
[2024-05-19 01:37:31] ++ /bin/hostname -f
[2024-05-19 01:37:31] + nodename=skurut14.grid.cesnet.cz
[2024-05-19 01:37:31] + echo nodename=skurut14.grid.cesnet.cz
[2024-05-19 01:37:31] + echo Processors=1
[2024-05-19 01:37:31] + echo Benchmark=HEPSPEC:1.0
[2024-05-19 01:37:31] + executable=./runpilot2-wrapper.sh
[2024-05-19 01:37:31] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-19 01:37:31] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-19 01:37:31] ++ head -n 1
[2024-05-19 01:37:31] ++ tr -d '\0'
[2024-05-19 01:37:31] + line1='#!/bin/bash'
[2024-05-19 01:37:31] ++ echo '#!/bin/bash'
[2024-05-19 01:37:31] ++ sed -n 's/^#! *//p'
[2024-05-19 01:37:31] + shebang=/bin/bash
[2024-05-19 01:37:31] ++ echo /bin/bash
[2024-05-19 01:37:31] ++ awk '{print $1}'
[2024-05-19 01:37:31] + interpreter=/bin/bash
[2024-05-19 01:37:31] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-19 01:37:31] + '[' x/bin/bash = x ']'
[2024-05-19 01:37:31] + type /bin/bash
[2024-05-19 01:37:31] + '[' xgnutime = xgnutime ']'
[2024-05-19 01:37:31] + /usr/bin/time -o /scratch/boinc/var/slot56/slots/1/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-19 01:37:31] + RESULT=2
[2024-05-19 01:37:31] + sed -i -e /nodename=/d /scratch/boinc/var/slot56/slots/1/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm.diag
[2024-05-19 01:37:31] ++ grep domain_name init_data.xml
[2024-05-19 01:37:31] ++ awk -F '>' '{print $2}'
[2024-05-19 01:37:31] ++ awk -F '<' '{print $1}'
[2024-05-19 01:37:31] ++ sed -e 's# #_#g'
[2024-05-19 01:37:31] + hostname=skurut14.grid.cesnet.cz
[2024-05-19 01:37:31] ++ grep user_name init_data.xml
[2024-05-19 01:37:31] ++ awk -F '>' '{print $2}'
[2024-05-19 01:37:31] ++ awk -F '<' '{print $1}'
[2024-05-19 01:37:31] ++ sed -e 's# #_#g'
[2024-05-19 01:37:31] + username=praguelcg2
[2024-05-19 01:37:31] + nodename=praguelcg2@skurut14.grid.cesnet.cz
[2024-05-19 01:37:31] + echo nodename=praguelcg2@skurut14.grid.cesnet.cz
[2024-05-19 01:37:31] + '[' -n 4 ']'
[2024-05-19 01:37:31] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot56/slots/1/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm.diag
[2024-05-19 01:37:31] + echo exitcode=2
[2024-05-19 01:37:31] + runtimeenvironments=
[2024-05-19 01:37:31] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-19 01:37:31] + RTE_function_0 2
[2024-05-19 01:37:31] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 01:37:31] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 01:37:31] + export BOINC_APP=ATLAS
[2024-05-19 01:37:31] + BOINC_APP=ATLAS
[2024-05-19 01:37:31] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 01:37:31] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 01:37:31] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 01:37:31] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 01:37:31] + '[' -z 2 ']'
[2024-05-19 01:37:31] + '[' 2 == 1 ']'
[2024-05-19 01:37:31] + '[' 0 -ne 0 ']'
[2024-05-19 01:37:31] + echo 'zip all output files'
[2024-05-19 01:37:31] + flist='*.diag '
[2024-05-19 01:37:31] + for f in ./heartbeat.json ./output.list ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1 ./gmlog/
[2024-05-19 01:37:31] + '[' -e ./heartbeat.json ']'
[2024-05-19 01:37:31] + flist='*.diag  ./heartbeat.json'
[2024-05-19 01:37:31] + for f in ./heartbeat.json ./output.list ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1 ./gmlog/
[2024-05-19 01:37:31] + '[' -e ./output.list ']'
[2024-05-19 01:37:31] + for f in ./heartbeat.json ./output.list ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1 ./gmlog/
[2024-05-19 01:37:31] + '[' -e ./log.38776146._000608.job.log.1 ']'
[2024-05-19 01:37:31] + flist='*.diag  ./heartbeat.json ./log.38776146._000608.job.log.1'
[2024-05-19 01:37:31] + for f in ./heartbeat.json ./output.list ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1 ./gmlog/
[2024-05-19 01:37:31] + '[' -e ./log.38776146._000608.job.log.1 ']'
[2024-05-19 01:37:31] + flist='*.diag  ./heartbeat.json ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1'
[2024-05-19 01:37:31] + for f in ./heartbeat.json ./output.list ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1 ./gmlog/
[2024-05-19 01:37:31] + '[' -e ./gmlog/ ']'
[2024-05-19 01:37:31] + '[' -f output.list ']'
[2024-05-19 01:37:31] + tar cvf result.tar.gz 3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm.diag ./heartbeat.json ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1
[2024-05-19 01:37:31] + '[' xgnutime = xcgroup ']'
[2024-05-19 01:37:31] + '[' -n '' ']'
[2024-05-19 01:37:31] + '[' -n '' ']'
[2024-05-19 01:37:31] ++ date +%s
[2024-05-19 01:37:31] + ACCOUNTING_ENDTIME=1716075451
[2024-05-19 01:37:31] ++ date -d '1970-01-01 UTC 1716075263 seconds' +%Y%m%d%H%M%SZ
[2024-05-19 01:37:31] + echo LRMSStartTime=20240519013423Z
[2024-05-19 01:37:31] ++ date -d '1970-01-01 UTC 1716075451 seconds' +%Y%m%d%H%M%SZ
[2024-05-19 01:37:31] + echo LRMSEndTime=20240519013731Z
[2024-05-19 01:37:31] + echo walltime=188
[2024-05-19 01:37:31] + echo exitcode=2
[2024-05-19 01:37:31] + exit 2
[2024-05-19 01:37:31] ./runtime_log
[2024-05-19 01:37:31] ./runtime_log.err
[2024-05-19 01:37:31] ./PanDA_Pilot-6205818393/log.EVNTtoHITS
[2024-05-19 01:37:31] ./PanDA_Pilot-6205818393/prmon.log
[2024-05-19 01:37:31] ./PanDA_Pilot-6205818393/PoolFileCatalog.xml
[2024-05-19 01:37:31] ./PanDA_Pilot-6205818393/pilotlog.txt
[2024-05-19 01:37:31] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-19 01:37:31] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-19 01:37:31] ./pilot3/pilot/util/realtimelogger.py
[2024-05-19 01:37:31] ./pilot3/pilot/util/loggingsupport.py
[2024-05-19 01:37:31] ./pilotlog.txt
[2024-05-19 01:37:31] ./log.38776146._000608.job.log.1
09:35:12 (2244779): wrapper (7.7.26015): starting
09:35:12 (2244779): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 09:35:12] Arguments: --nthreads 4
[2024-05-19 09:35:12] Threads: 4
[2024-05-19 09:35:12] This job has been restarted, cleaning up previous attempt
[2024-05-19 09:35:12] Checking for CVMFS
[2024-05-19 09:35:12] No cvmfs_config command found, will try listing directly
[2024-05-19 09:35:12] CVMFS is ok
[2024-05-19 09:35:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 09:35:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 09:35:12] Further information can be found at the LHC@home message board.
[2024-05-19 09:35:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 09:35:12] Checking for apptainer binary...
[2024-05-19 09:35:12] which: no apptainer in ((null))
[2024-05-19 09:35:12] apptainer is not installed, using version from CVMFS
[2024-05-19 09:35:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 09:35:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-19 09:35:13] apptainer works
[2024-05-19 09:35:13] Set ATHENA_PROC_NUMBER=4
[2024-05-19 09:35:13] Set ATHENA_CORE_NUMBER=4
[2024-05-19 09:35:13] Starting ATLAS job with PandaID=6205818393
[2024-05-19 09:35:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 09:38:21] Job failed
[2024-05-19 09:38:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-19 09:38:21] ++ pwd
[2024-05-19 09:38:21] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot56/slots/1/
[2024-05-19 09:38:21] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot56/slots/1/
[2024-05-19 09:38:21] + mv ATLAS.root_0 EVNT.38776140._000025.pool.root.1
[2024-05-19 09:38:21] mv: 'ATLAS.root_0' and 'EVNT.38776140._000025.pool.root.1' are the same file
[2024-05-19 09:38:21] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-19 09:38:21] + umask 077
[2024-05-19 09:38:21] ++ date +%s
[2024-05-19 09:38:21] + ACCOUNTING_STARTTIME=1716104114
[2024-05-19 09:38:21] + echo 'Detecting resource accounting method available for the job.'
[2024-05-19 09:38:21] Detecting resource accounting method available for the job.
[2024-05-19 09:38:21] + JOB_ACCOUNTING=
[2024-05-19 09:38:21] + command -v arc-job-cgroup
[2024-05-19 09:38:21] + '[' -z '' ']'
[2024-05-19 09:38:21] + GNU_TIME=/usr/bin/time
[2024-05-19 09:38:21] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-19 09:38:21] Looking for /usr/bin/time tool for accounting measurements
[2024-05-19 09:38:21] + '[' '!' -z /usr/bin/time ']'
[2024-05-19 09:38:21] + /usr/bin/time --version
[2024-05-19 09:38:21] + echo 'GNU time found and will be used for job accounting.'
[2024-05-19 09:38:21] GNU time found and will be used for job accounting.
[2024-05-19 09:38:21] + JOB_ACCOUNTING=gnutime
[2024-05-19 09:38:21] + '[' -z gnutime ']'
[2024-05-19 09:38:21] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-19 09:38:21] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-19 09:38:21] + export GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-13/BOINC_MCORE/6205818393.out
[2024-05-19 09:38:21] + GTAG=http://aipanda404.cern.ch/data/jobs/2024-05-13/BOINC_MCORE/6205818393.out
[2024-05-19 09:38:21] + export PILOT_NOKILL=YES
[2024-05-19 09:38:21] + PILOT_NOKILL=YES
[2024-05-19 09:38:21] + export GRID_GLOBAL_JOBID=3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm
[2024-05-19 09:38:21] + GRID_GLOBAL_JOBID=3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm
[2024-05-19 09:38:21] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm
[2024-05-19 09:38:21] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm
[2024-05-19 09:38:21] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-19 09:38:21] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-19 09:38:21] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-19 09:38:21] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-19 09:38:21] ++ pwd
[2024-05-19 09:38:21] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot56/slots/1
[2024-05-19 09:38:21] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-19 09:38:21] ++ pwd
[2024-05-19 09:38:21] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot56/slots/1/log.38776146._000608.job.log.1
[2024-05-19 09:38:21] ++ pwd
[2024-05-19 09:38:21] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot56/slots/1/log.38776146._000608.job.log.1
[2024-05-19 09:38:21] ++ pwd
[2024-05-19 09:38:21] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot56/slots/1.diag
[2024-05-19 09:38:21] + '[' '!' -z '' ']'
[2024-05-19 09:38:21] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-19 09:38:21] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-19 09:38:21] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-19 09:38:21] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-19 09:38:21] + '[' '!' -z '' ']'
[2024-05-19 09:38:21] + '[' -z yes ']'
[2024-05-19 09:38:21] ++ pwd
[2024-05-19 09:38:21] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot56/slots/1/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm.diag
[2024-05-19 09:38:21] + runtimeenvironments=
[2024-05-19 09:38:21] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-19 09:38:21] + RTE_function_0 1
[2024-05-19 09:38:21] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 09:38:21] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 09:38:21] + export BOINC_APP=ATLAS
[2024-05-19 09:38:21] + BOINC_APP=ATLAS
[2024-05-19 09:38:21] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 09:38:21] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 09:38:21] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 09:38:21] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 09:38:21] + '[' -z 1 ']'
[2024-05-19 09:38:21] + '[' 1 == 1 ']'
[2024-05-19 09:38:21] + shift
[2024-05-19 09:38:21] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-19 09:38:21] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 09:38:21] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-19 09:38:21] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot56/slots/1/
[2024-05-19 09:38:21] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot56/slots/1/
[2024-05-19 09:38:21] + '[' -e /scratch/boinc/var/slot56/slots/1/init_data.xml ']'
[2024-05-19 09:38:21] + grep '<use_http_proxy/>' /scratch/boinc/var/slot56/slots/1/init_data.xml
[2024-05-19 09:38:21] + '[' -e /scratch/boinc/var/slot56/slots/1/init_data.xml ']'
[2024-05-19 09:38:21] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot56/slots/1/init_data.xml
[2024-05-19 09:38:21] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-19 09:38:21] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 09:38:21] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-19 09:38:21] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 09:38:21] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-19 09:38:21] + '[' 0 -ne 0 ']'
[2024-05-19 09:38:21] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-19 09:38:21] + '[' -f /etc/os-release ']'
[2024-05-19 09:38:21] +++ cat /etc/os-release
[2024-05-19 09:38:21] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-19 09:38:21] +++ NAME='CentOS Linux'
[2024-05-19 09:38:21] +++ VERSION='7 (Core)'
[2024-05-19 09:38:21] +++ ID=centos
[2024-05-19 09:38:21] +++ ID_LIKE='rhel fedora'
[2024-05-19 09:38:21] +++ VERSION_ID=7
[2024-05-19 09:38:21] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-19 09:38:21] +++ ANSI_COLOR='0;31'
[2024-05-19 09:38:21] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-19 09:38:21] +++ HOME_URL=https://www.centos.org/
[2024-05-19 09:38:21] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-19 09:38:21] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-19 09:38:21] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-19 09:38:21] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-19 09:38:21] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-19 09:38:21] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-19 09:38:21] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-19 09:38:21] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-19 09:38:21] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-19 09:38:21] + HOME=/scratch/boinc/var/slot56/slots/1
[2024-05-19 09:38:21] + export HOME
[2024-05-19 09:38:21] + cd /scratch/boinc/var/slot56/slots/1
[2024-05-19 09:38:21] + '[' '!' -z '' ']'
[2024-05-19 09:38:21] + '[' -z '' ']'
[2024-05-19 09:38:21] ++ /bin/hostname -f
[2024-05-19 09:38:21] + nodename=skurut14.grid.cesnet.cz
[2024-05-19 09:38:21] + echo nodename=skurut14.grid.cesnet.cz
[2024-05-19 09:38:21] + echo Processors=1
[2024-05-19 09:38:21] + echo Benchmark=HEPSPEC:1.0
[2024-05-19 09:38:21] + executable=./runpilot2-wrapper.sh
[2024-05-19 09:38:21] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-19 09:38:21] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-19 09:38:21] ++ head -n 1
[2024-05-19 09:38:21] ++ tr -d '\0'
[2024-05-19 09:38:21] + line1='#!/bin/bash'
[2024-05-19 09:38:21] ++ echo '#!/bin/bash'
[2024-05-19 09:38:21] ++ sed -n 's/^#! *//p'
[2024-05-19 09:38:21] + shebang=/bin/bash
[2024-05-19 09:38:21] ++ echo /bin/bash
[2024-05-19 09:38:21] ++ awk '{print $1}'
[2024-05-19 09:38:21] + interpreter=/bin/bash
[2024-05-19 09:38:21] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-19 09:38:21] + '[' x/bin/bash = x ']'
[2024-05-19 09:38:21] + type /bin/bash
[2024-05-19 09:38:21] + '[' xgnutime = xgnutime ']'
[2024-05-19 09:38:21] + /usr/bin/time -o /scratch/boinc/var/slot56/slots/1/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-19 09:38:21] + RESULT=2
[2024-05-19 09:38:21] + sed -i -e /nodename=/d /scratch/boinc/var/slot56/slots/1/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm.diag
[2024-05-19 09:38:21] ++ grep domain_name init_data.xml
[2024-05-19 09:38:21] ++ awk -F '>' '{print $2}'
[2024-05-19 09:38:21] ++ sed -e 's# #_#g'
[2024-05-19 09:38:21] ++ awk -F '<' '{print $1}'
[2024-05-19 09:38:21] + hostname=skurut14.grid.cesnet.cz
[2024-05-19 09:38:21] ++ grep user_name init_data.xml
[2024-05-19 09:38:21] ++ awk -F '>' '{print $2}'
[2024-05-19 09:38:21] ++ awk -F '<' '{print $1}'
[2024-05-19 09:38:21] ++ sed -e 's# #_#g'
[2024-05-19 09:38:21] + username=praguelcg2
[2024-05-19 09:38:21] + nodename=praguelcg2@skurut14.grid.cesnet.cz
[2024-05-19 09:38:21] + echo nodename=praguelcg2@skurut14.grid.cesnet.cz
[2024-05-19 09:38:21] + '[' -n 4 ']'
[2024-05-19 09:38:21] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot56/slots/1/3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm.diag
[2024-05-19 09:38:21] + echo exitcode=2
[2024-05-19 09:38:21] + runtimeenvironments=
[2024-05-19 09:38:21] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-19 09:38:21] + RTE_function_0 2
[2024-05-19 09:38:21] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 09:38:21] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-19 09:38:21] + export BOINC_APP=ATLAS
[2024-05-19 09:38:21] + BOINC_APP=ATLAS
[2024-05-19 09:38:21] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 09:38:21] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-19 09:38:21] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 09:38:21] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-19 09:38:21] + '[' -z 2 ']'
[2024-05-19 09:38:21] + '[' 2 == 1 ']'
[2024-05-19 09:38:21] + '[' 0 -ne 0 ']'
[2024-05-19 09:38:21] + echo 'zip all output files'
[2024-05-19 09:38:21] + flist='*.diag '
[2024-05-19 09:38:21] + for f in ./heartbeat.json ./output.list ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1 ./gmlog/
[2024-05-19 09:38:21] + '[' -e ./heartbeat.json ']'
[2024-05-19 09:38:21] + flist='*.diag  ./heartbeat.json'
[2024-05-19 09:38:21] + for f in ./heartbeat.json ./output.list ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1 ./gmlog/
[2024-05-19 09:38:21] + '[' -e ./output.list ']'
[2024-05-19 09:38:21] + for f in ./heartbeat.json ./output.list ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1 ./gmlog/
[2024-05-19 09:38:21] + '[' -e ./log.38776146._000608.job.log.1 ']'
[2024-05-19 09:38:21] + flist='*.diag  ./heartbeat.json ./log.38776146._000608.job.log.1'
[2024-05-19 09:38:21] + for f in ./heartbeat.json ./output.list ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1 ./gmlog/
[2024-05-19 09:38:21] + '[' -e ./log.38776146._000608.job.log.1 ']'
[2024-05-19 09:38:21] + flist='*.diag  ./heartbeat.json ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1'
[2024-05-19 09:38:21] + for f in ./heartbeat.json ./output.list ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1 ./gmlog/
[2024-05-19 09:38:21] + '[' -e ./gmlog/ ']'
[2024-05-19 09:38:21] + '[' -f output.list ']'
[2024-05-19 09:38:21] + tar cvf result.tar.gz 3AbKDmexeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmzeJKDmh1Qdwm.diag ./heartbeat.json ./log.38776146._000608.job.log.1 ./log.38776146._000608.job.log.1
[2024-05-19 09:38:21] + '[' xgnutime = xcgroup ']'
[2024-05-19 09:38:21] + '[' -n '' ']'
[2024-05-19 09:38:21] + '[' -n '' ']'
[2024-05-19 09:38:21] ++ date +%s
[2024-05-19 09:38:21] + ACCOUNTING_ENDTIME=1716104301
[2024-05-19 09:38:21] ++ date -d '1970-01-01 UTC 1716104114 seconds' +%Y%m%d%H%M%SZ
[2024-05-19 09:38:21] + echo LRMSStartTime=20240519093514Z
[2024-05-19 09:38:21] ++ date -d '1970-01-01 UTC 1716104301 seconds' +%Y%m%d%H%M%SZ
[2024-05-19 09:38:21] + echo LRMSEndTime=20240519093821Z
[2024-05-19 09:38:21] + echo walltime=187
[2024-05-19 09:38:21] + echo exitcode=2
[2024-05-19 09:38:21] + exit 2
[2024-05-19 09:38:21] ./runtime_log
[2024-05-19 09:38:21] ./runtime_log.err
[2024-05-19 09:38:21] ./PanDA_Pilot-6205818393/log.EVNTtoHITS
[2024-05-19 09:38:21] ./PanDA_Pilot-6205818393/prmon.log
[2024-05-19 09:38:21] ./PanDA_Pilot-6205818393/PoolFileCatalog.xml
[2024-05-19 09:38:21] ./PanDA_Pilot-6205818393/pilotlog.txt
[2024-05-19 09:38:21] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-19 09:38:21] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-19 09:38:21] ./pilot3/pilot/util/realtimelogger.py
[2024-05-19 09:38:21] ./pilot3/pilot/util/loggingsupport.py
[2024-05-19 09:38:21] ./pilotlog.txt
[2024-05-19 09:38:21] ./log.38776146._000608.job.log.1
09:48:22 (2244779): run_atlas exited; CPU time 12.669390
09:48:22 (2244779): app exit status: 0x1
09:48:22 (2244779): called boinc_finish(195)

</stderr_txt>
]]>

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