Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
05:14:15 (21641): wrapper (7.7.26015): starting
05:14:15 (21641): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 05:14:15] Arguments: --nthreads 12
[2024-05-17 05:14:15] Threads: 12
[2024-05-17 05:14:15] Checking for CVMFS
[2024-05-17 05:14:16] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 05:14:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 05:14:16] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 05:14:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 05:14:16] 2.10.1.0 127188 183462 154364 132840 1 124 33181622 45568001 11842 130560 0 1090717577 99.763 678425085 18170 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-17 05:14:16] CVMFS is ok
[2024-05-17 05:14:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 05:14:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 05:14:16] Further information can be found at the LHC@home message board.
[2024-05-17 05:14:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 05:14:16] Checking for apptainer binary...
[2024-05-17 05:14:16] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 05:14:16] Running /usr/bin/apptainer --version
[2024-05-17 05:14:16] apptainer version 1.1.8-1.el7
[2024-05-17 05:14:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 05:14:17] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0158.triumf.lcg
[2024-05-17 05:14:17] apptainer works
[2024-05-17 05:14:17] Set ATHENA_PROC_NUMBER=12
[2024-05-17 05:14:17] Set ATHENA_CORE_NUMBER=12
[2024-05-17 05:14:17] Starting ATLAS job with PandaID=6205810816
[2024-05-17 05:14:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 06:33:28]  *** The last 200 lines of the pilot log: ***
[2024-05-17 06:33:28]  domain=
[2024-05-17 06:33:28]  filesize=356019
[2024-05-17 06:33:28]  filetype=log
[2024-05-17 06:33:28]  guid=55d2e796-6ee8-4aa9-b02a-31a6500f4ec4
[2024-05-17 06:33:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 06:33:28]  is_tar=False
[2024-05-17 06:33:28]  lfn=log.38776125._002921.job.log.tgz.1
[2024-05-17 06:33:28]  mtime=0
[2024-05-17 06:33:28]  protocol_id=None
[2024-05-17 06:33:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 06:33:28]  replicas=None
[2024-05-17 06:33:28]  scope=mc23_13p6TeV
[2024-05-17 06:33:28]  status=None
[2024-05-17 06:33:28]  status_code=0
[2024-05-17 06:33:28]  storage_token=
[2024-05-17 06:33:28]  surl=/home/boinc/slots/0/PanDA_Pilot-6205810816/log.38776125._002921.job.log.tgz.1
[2024-05-17 06:33:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/ce/log.38776125._002921.job.log.tgz.1
[2024-05-17 06:33:28]  workdir=None
[2024-05-17 06:33:28] ]
[2024-05-17 06:33:28] 2024-05-17 13:33:04,029 | INFO     | transferring file log.38776125._002921.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6205810816/log.38776125._002921.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 06:33:28] 2024-05-17 13:33:04,029 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6205810816/log.38776125._002921.job.log.tgz.1 /home/boinc/slots/0/log.38776125._002921.job.log.t
[2024-05-17 06:33:28] 2024-05-17 13:33:04,051 | INFO     | adding to output.list: log.38776125._002921.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6e/ce/log.38776125._002921.job.log.tg
[2024-05-17 06:33:28] 2024-05-17 13:33:04,052 | INFO     | summary of transferred files:
[2024-05-17 06:33:28] 2024-05-17 13:33:04,052 | INFO     |  -- lfn=log.38776125._002921.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 06:33:28] 2024-05-17 13:33:04,052 | INFO     | stage-out finished correctly
[2024-05-17 06:33:28] 2024-05-17 13:33:05,257 | WARNING  | process 32433 is no longer using CPU - aborting
[2024-05-17 06:33:28] 2024-05-17 13:33:05,257 | INFO     | will not send any job update
[2024-05-17 06:33:28] 2024-05-17 13:33:05,685 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 06:33:28] 2024-05-17 13:33:06,385 | INFO     | job 6205810816 has state=finished
[2024-05-17 06:33:28] 2024-05-17 13:33:06,386 | INFO     | preparing for final server update for job 6205810816 in state='finished'
[2024-05-17 06:33:28] 2024-05-17 13:33:06,386 | INFO     | this job has now completed (state=finished)
[2024-05-17 06:33:28] 2024-05-17 13:33:06,387 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 06:33:28] 2024-05-17 13:33:06,387 | INFO     | job 6205810816 has finished - writing final server update
[2024-05-17 06:33:28] 2024-05-17 13:33:06,387 | INFO     | total number of processed events: 400 (read)
[2024-05-17 06:33:28] 2024-05-17 13:33:06,393 | INFO     | executing command: lscpu
[2024-05-17 06:33:28] 2024-05-17 13:33:06,459 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 06:33:28] 2024-05-17 13:33:06,460 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 06:33:28] 2024-05-17 13:33:06,510 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 06:33:28] 2024-05-17 13:33:07,760 | INFO     | monitor loop #359: job 0:6205810816 is in state 'finished'
[2024-05-17 06:33:28] 2024-05-17 13:33:07,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 06:33:28] 2024-05-17 13:33:10,261 | INFO     | monitor loop #360: job 0:6205810816 is in state 'finished'
[2024-05-17 06:33:28] 2024-05-17 13:33:10,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 06:33:28] 2024-05-17 13:33:10,306 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 06:33:28] 2024-05-17 13:33:10,306 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6205810816/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 06:33:28] 2024-05-17 13:33:10,307 | INFO     | extracted standard info from prmon json
[2024-05-17 06:33:28] 2024-05-17 13:33:10,307 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 06:33:28] 2024-05-17 13:33:10,307 | WARNING  | GPU info not found in prmon json
[2024-05-17 06:33:28] 2024-05-17 13:33:10,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 06:33:28] 2024-05-17 13:33:10,307 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 06:33:28] 2024-05-17 13:33:10,309 | INFO     | fitting pss+swap vs Time
[2024-05-17 06:33:28] 2024-05-17 13:33:10,309 | INFO     | model: linear, x: [1715948398.0, 1715948459.0, 1715948520.0, 1715948581.0, 1715948642.0, 1715948703.0, 1715948764.0, 1715948825.0, 1715948886.0, 1715948947.0, 1715
[2024-05-17 06:33:28] 2024-05-17 13:33:10,309 | INFO     | sum of square deviations: 106336877.5
[2024-05-17 06:33:28] 2024-05-17 13:33:10,309 | INFO     | sum of deviations: 24598249603.499996
[2024-05-17 06:33:28] 2024-05-17 13:33:10,309 | INFO     | mean x: 1715950502.5
[2024-05-17 06:33:28] 2024-05-17 13:33:10,310 | INFO     | mean y: 2668214.814285714
[2024-05-17 06:33:28] 2024-05-17 13:33:10,310 | INFO     | -- intersect: -396937506822.263
[2024-05-17 06:33:28] 2024-05-17 13:33:10,310 | INFO     | intersect: -396937506822.263
[2024-05-17 06:33:28] 2024-05-17 13:33:10,310 | INFO     | chi2: 2.5941553012326612
[2024-05-17 06:33:28] 2024-05-17 13:33:10,310 | INFO     | -- intersect: -396937506822.263
[2024-05-17 06:33:28] 2024-05-17 13:33:10,310 | INFO     | current memory leak: 231.32 B/s (using 70 data points, chi2=2.59)
[2024-05-17 06:33:28] 2024-05-17 13:33:10,310 | INFO     | ..............................
[2024-05-17 06:33:28] 2024-05-17 13:33:10,310 | INFO     | . Timing measurements:
[2024-05-17 06:33:28] 2024-05-17 13:33:10,310 | INFO     | . get job = 0 s
[2024-05-17 06:33:28] 2024-05-17 13:33:10,310 | INFO     | . initial setup = 1 s
[2024-05-17 06:33:28] 2024-05-17 13:33:10,311 | INFO     | . payload setup = 5 s
[2024-05-17 06:33:28] 2024-05-17 13:33:10,311 | INFO     | . stage-in = 0 s
[2024-05-17 06:33:28] 2024-05-17 13:33:10,311 | INFO     | . payload execution = 4691 s
[2024-05-17 06:33:28] 2024-05-17 13:33:10,311 | INFO     | . stage-out = 0 s
[2024-05-17 06:33:28] 2024-05-17 13:33:10,311 | INFO     | . log creation = 0 s
[2024-05-17 06:33:28] 2024-05-17 13:33:10,311 | INFO     | ..............................
[2024-05-17 06:33:28] 2024-05-17 13:33:10,377 | INFO     | 
[2024-05-17 06:33:28] 2024-05-17 13:33:10,377 | INFO     | job summary report
[2024-05-17 06:33:28] 2024-05-17 13:33:10,378 | INFO     | --------------------------------------------------
[2024-05-17 06:33:28] 2024-05-17 13:33:10,378 | INFO     | PanDA job id: 6205810816
[2024-05-17 06:33:28] 2024-05-17 13:33:10,378 | INFO     | task id: 38776125
[2024-05-17 06:33:28] 2024-05-17 13:33:10,378 | INFO     | errors: (none)
[2024-05-17 06:33:28] 2024-05-17 13:33:10,378 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 06:33:28] 2024-05-17 13:33:10,378 | INFO     | pilot state: finished 
[2024-05-17 06:33:28] 2024-05-17 13:33:10,378 | INFO     | transexitcode: 0
[2024-05-17 06:33:28] 2024-05-17 13:33:10,378 | INFO     | exeerrorcode: 0
[2024-05-17 06:33:28] 2024-05-17 13:33:10,379 | INFO     | exeerrordiag: 
[2024-05-17 06:33:28] 2024-05-17 13:33:10,379 | INFO     | exitcode: 0
[2024-05-17 06:33:28] 2024-05-17 13:33:10,379 | INFO     | exitmsg: OK
[2024-05-17 06:33:28] 2024-05-17 13:33:10,379 | INFO     | cpuconsumptiontime: 42130 s
[2024-05-17 06:33:28] 2024-05-17 13:33:10,379 | INFO     | nevents: 400
[2024-05-17 06:33:28] 2024-05-17 13:33:10,379 | INFO     | neventsw: 0
[2024-05-17 06:33:28] 2024-05-17 13:33:10,379 | INFO     | pid: 32433
[2024-05-17 06:33:28] 2024-05-17 13:33:10,379 | INFO     | pgrp: 32433
[2024-05-17 06:33:28] 2024-05-17 13:33:10,379 | INFO     | corecount: 12
[2024-05-17 06:33:28] 2024-05-17 13:33:10,380 | INFO     | event service: False
[2024-05-17 06:33:28] 2024-05-17 13:33:10,380 | INFO     | sizes: {0: 2392021, 1: 2392220, 5: 2392426, 11: 2392482, 4700: 2418635, 4701: 2427589, 4703: 2427773, 4708: 2427943}
[2024-05-17 06:33:28] 2024-05-17 13:33:10,380 | INFO     | --------------------------------------------------
[2024-05-17 06:33:28] 2024-05-17 13:33:10,380 | INFO     | 
[2024-05-17 06:33:28] 2024-05-17 13:33:10,380 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 06:33:28] 2024-05-17 13:33:10,403 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,404 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,404 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,404 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,406 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 06:33:28] 2024-05-17 13:33:10,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,406 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 06:33:28] 2024-05-17 13:33:10,406 | INFO     | job 6205810816 has completed (purged errors)
[2024-05-17 06:33:28] 2024-05-17 13:33:10,406 | INFO     | overall cleanup function is called
[2024-05-17 06:33:28] 2024-05-17 13:33:11,415 | INFO     | --- collectZombieJob: --- 10, [32433]
[2024-05-17 06:33:28] 2024-05-17 13:33:11,415 | INFO     | zombie collector waiting for pid 32433
[2024-05-17 06:33:28] 2024-05-17 13:33:11,415 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 06:33:28] 2024-05-17 13:33:12,421 | INFO     | collected zombie processes
[2024-05-17 06:33:28] 2024-05-17 13:33:12,421 | INFO     | will now attempt to kill all subprocesses of pid=32433
[2024-05-17 06:33:28] 2024-05-17 13:33:12,682 | INFO     | process IDs to be killed: [32433] (in reverse order)
[2024-05-17 06:33:28] 2024-05-17 13:33:12,827 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 06:33:28] 2024-05-17 13:33:12,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 06:33:28] 2024-05-17 13:33:12,840 | INFO     | did not find any defunct processes belonging to 32433
[2024-05-17 06:33:28] 2024-05-17 13:33:12,851 | INFO     | did not find any defunct processes belonging to 32433
[2024-05-17 06:33:28] 2024-05-17 13:33:12,851 | INFO     | ready for new job
[2024-05-17 06:33:28] 2024-05-17 13:33:12,851 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 06:33:28] 2024-05-17 13:33:12,853 | INFO     | *************************************
[2024-05-17 06:33:28] 2024-05-17 13:33:12,853 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 06:33:28] 2024-05-17 13:33:12,853 | INFO     | *************************************
[2024-05-17 06:33:28] 2024-05-17 13:33:12,853 | INFO     | 
[2024-05-17 06:33:28] 2024-05-17 13:33:12,857 | INFO     | architecture information:
[2024-05-17 06:33:28] 2024-05-17 13:33:12,857 | INFO     | executing command: cat /etc/os-release
[2024-05-17 06:33:28] 2024-05-17 13:33:12,879 | INFO     | cat /etc/os-release:
[2024-05-17 06:33:28] NAME="CentOS Linux"
[2024-05-17 06:33:28] VERSION="7 (Core)"
[2024-05-17 06:33:28] ID="centos"
[2024-05-17 06:33:28] ID_LIKE="rhel fedora"
[2024-05-17 06:33:28] VERSION_ID="7"
[2024-05-17 06:33:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 06:33:28] ANSI_COLOR="0;31"
[2024-05-17 06:33:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 06:33:28] HOME_URL="https://www.centos.org/"
[2024-05-17 06:33:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 06:33:28] 
[2024-05-17 06:33:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 06:33:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 06:33:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 06:33:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 06:33:28] 
[2024-05-17 06:33:28] 2024-05-17 13:33:12,880 | INFO     | *************************************
[2024-05-17 06:33:28] 2024-05-17 13:33:13,383 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 06:33:28] 2024-05-17 13:33:13,407 | INFO     | sufficient remaining disk space (2082706817024 B)
[2024-05-17 06:33:28] 2024-05-17 13:33:13,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 06:33:28] 2024-05-17 13:33:13,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 06:33:28] 2024-05-17 13:33:13,587 | INFO     | all payload control threads have been joined
[2024-05-17 06:33:28] 2024-05-17 13:33:13,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 06:33:28] 2024-05-17 13:33:13,769 | INFO     | aborting loop
[2024-05-17 06:33:28] 2024-05-17 13:33:13,788 | INFO     | all data control threads have been joined
[2024-05-17 06:33:28] 2024-05-17 13:33:14,218 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 06:33:28] 2024-05-17 13:33:14,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 06:33:28] 2024-05-17 13:33:14,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 06:33:28] 2024-05-17 13:33:14,414 | INFO     | [job] retrieve thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:14,417 | INFO     | all job control threads have been joined
[2024-05-17 06:33:28] 2024-05-17 13:33:14,593 | INFO     | [payload] control thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:14,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 06:33:28] 2024-05-17 13:33:14,657 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:14,775 | INFO     | [job] job monitor thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:14,793 | INFO     | [data] control thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:15,033 | INFO     | [job] validate thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:15,128 | INFO     | [data] copytool_in thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:15,212 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:15,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 06:33:28] 2024-05-17 13:33:15,420 | INFO     | [job] control thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:15,442 | INFO     | [payload] failed_post thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:15,449 | INFO     | [payload] validate_post thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:15,785 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:15,853 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:16,283 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 06:33:28] 2024-05-17 13:33:16,385 | INFO     | [job] queue monitor thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:16,631 | INFO     | [data] copytool_out thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:20,288 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 06:33:28] 2024-05-17 13:33:22,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140201372424000)>', '<ExcThread(monitor, started 140201168094976)>']
[2024-05-17 06:33:28] 2024-05-17 13:33:22,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 06:33:28] 2024-05-17 13:33:22,252 | INFO     | [monitor] control thread has ended
[2024-05-17 06:33:28] 2024-05-17 13:33:27,254 | INFO     | all workflow threads have been joined
[2024-05-17 06:33:28] 2024-05-17 13:33:27,254 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 06:33:28] 2024-05-17 13:33:27,255 | INFO     | traces error code: 0
[2024-05-17 06:33:28] 2024-05-17 13:33:27,255 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 06:33:28] 2024-05-17 13:33:27,335 [wrapper] ==== pilot stdout END ====
[2024-05-17 06:33:28] 2024-05-17 13:33:27,337 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 06:33:28] 2024-05-17 13:33:27,340 [wrapper] pilotpid: 25840
[2024-05-17 06:33:28] 2024-05-17 13:33:27,342 [wrapper] Pilot exit status: 0
[2024-05-17 06:33:28] 2024-05-17 13:33:27,352 [wrapper] pandaids: 6205810816
[2024-05-17 06:33:28] 2024-05-17 13:33:27,431 [wrapper] cleanup: SIGTERM to supervisor_pilot  55055 25841
[2024-05-17 06:33:28] 2024-05-17 13:33:27,433 [wrapper] Test setup, not cleaning
[2024-05-17 06:33:28] 2024-05-17 13:33:27,435 [wrapper] ==== wrapper stdout END ====
[2024-05-17 06:33:28] 2024-05-17 13:33:27,437 [wrapper] ==== wrapper stderr END ====
[2024-05-17 06:33:28] 2024-05-17 13:33:27,443 [wrapper] apfmon messages muted
[2024-05-17 06:33:28]  *** Error codes and diagnostics ***
[2024-05-17 06:33:28]     "exeErrorCode": 0,
[2024-05-17 06:33:28]     "exeErrorDiag": "",
[2024-05-17 06:33:28]     "pilotErrorCode": 0,
[2024-05-17 06:33:28]     "pilotErrorDiag": "",
[2024-05-17 06:33:28]  *** Listing of results directory ***
[2024-05-17 06:33:28] total 832596
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc    467845 May 12 23:49 pilot3.tar.gz
[2024-05-17 06:33:28] -rwx------ 1 boinc boinc     32251 May 12 23:51 runpilot2-wrapper.sh
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc      5633 May 12 23:57 queuedata.json
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc       100 May 17 05:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 06:33:28] -rwxr-xr-x 1 boinc boinc      7986 May 17 05:14 run_atlas
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc       105 May 17 05:14 job.xml
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc      6622 May 17 05:14 init_data.xml
[2024-05-17 06:33:28] -rw-r--r-- 2 boinc boinc 600401743 May 17 05:14 EVNT.38776119._000135.pool.root.1
[2024-05-17 06:33:28] -rw-r--r-- 2 boinc boinc     17537 May 17 05:14 start_atlas.sh
[2024-05-17 06:33:28] drwxrwx--x 2 boinc boinc      4096 May 17 05:14 shared
[2024-05-17 06:33:28] -rw-r--r-- 2 boinc boinc    480005 May 17 05:14 input.tar.gz
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc         0 May 17 05:14 boinc_lockfile
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc      2634 May 17 05:14 pandaJob.out
[2024-05-17 06:33:28] -rw------- 1 boinc boinc       424 May 17 05:14 setup.sh.local
[2024-05-17 06:33:28] -rw------- 1 boinc boinc   1019378 May 17 05:14 agis_schedconf.cvmfs.json
[2024-05-17 06:33:28] -rw------- 1 boinc boinc         0 May 17 05:14 agis_ddmendpoints.agis.ALL.json
[2024-05-17 06:33:28] -rw------- 1 boinc boinc   1324701 May 17 05:14 cric_ddmendpoints.json
[2024-05-17 06:33:28] drwx------ 4 boinc boinc      4096 May 17 05:14 pilot3
[2024-05-17 06:33:28] -rw------- 1 boinc boinc 247019881 May 17 06:32 HITS.38776125._002921.pool.root.1
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc       530 May 17 06:32 boinc_task_state.xml
[2024-05-17 06:33:28] -rw------- 1 boinc boinc        95 May 17 06:32 pilot_heartbeat.json
[2024-05-17 06:33:28] -rw------- 1 boinc boinc      1070 May 17 06:32 memory_monitor_summary.json
[2024-05-17 06:33:28] -rw------- 1 boinc boinc    356019 May 17 06:33 log.38776125._002921.job.log.tgz.1
[2024-05-17 06:33:28] -rw------- 1 boinc boinc      7769 May 17 06:33 heartbeat.json
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc        27 May 17 06:33 wrapper_checkpoint.txt
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc      8192 May 17 06:33 boinc_mmap_file
[2024-05-17 06:33:28] -rw------- 1 boinc boinc      4210 May 17 06:33 pilotlog.txt
[2024-05-17 06:33:28] -rw------- 1 boinc boinc    455331 May 17 06:33 log.38776125._002921.job.log.1
[2024-05-17 06:33:28] -rw------- 1 boinc boinc       357 May 17 06:33 output.list
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc       620 May 17 06:33 runtime_log
[2024-05-17 06:33:28] -rw------- 1 boinc boinc    829440 May 17 06:33 result.tar.gz
[2024-05-17 06:33:28] -rw------- 1 boinc boinc       654 May 17 06:33 VO7KDm6heQ5n7Olcko1bjSoqABFKDmABFKDmOtvXDm9uWKDmJvovFn.diag
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc     11286 May 17 06:33 runtime_log.err
[2024-05-17 06:33:28] -rw-r--r-- 1 boinc boinc     21487 May 17 06:33 stderr.txt
[2024-05-17 06:33:28] HITS file was successfully produced:
[2024-05-17 06:33:28] -rw------- 1 boinc boinc 247019881 May 17 06:32 shared/HITS.pool.root.1
[2024-05-17 06:33:28]  *** Contents of shared directory: ***
[2024-05-17 06:33:28] total 828876
[2024-05-17 06:33:28] -rw-r--r-- 2 boinc boinc 600401743 May 17 05:14 ATLAS.root_0
[2024-05-17 06:33:28] -rw-r--r-- 2 boinc boinc     17537 May 17 05:14 start_atlas.sh
[2024-05-17 06:33:28] -rw-r--r-- 2 boinc boinc    480005 May 17 05:14 input.tar.gz
[2024-05-17 06:33:28] -rw------- 1 boinc boinc 247019881 May 17 06:32 HITS.pool.root.1
[2024-05-17 06:33:28] -rw------- 1 boinc boinc    829440 May 17 06:33 result.tar.gz
06:33:30 (21641): run_atlas exited; CPU time 41715.500949
06:33:30 (21641): called boinc_finish(0)

</stderr_txt>
]]>

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