Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:06:53 (859834): wrapper (7.7.26015): starting
18:06:53 (859834): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 18:06:53] Arguments: --nthreads 4
[2024-05-18 18:06:53] Threads: 4
[2024-05-18 18:06:53] Checking for CVMFS
[2024-05-18 18:06:53] No cvmfs_config command found, will try listing directly
[2024-05-18 18:06:53] CVMFS is ok
[2024-05-18 18:06:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 18:06:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 18:06:53] Further information can be found at the LHC@home message board.
[2024-05-18 18:06:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 18:06:53] Checking for apptainer binary...
[2024-05-18 18:06:53] which: no apptainer in ((null))
[2024-05-18 18:06:53] apptainer is not installed, using version from CVMFS
[2024-05-18 18:06:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 18:06:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-18 18:06:54] apptainer works
[2024-05-18 18:06:54] Set ATHENA_PROC_NUMBER=4
[2024-05-18 18:06:54] Set ATHENA_CORE_NUMBER=4
[2024-05-18 18:06:54] Starting ATLAS job with PandaID=6205812248
[2024-05-18 18:06:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 20:38:13]  *** The last 200 lines of the pilot log: ***
[2024-05-18 20:38:13] 2024-05-18 18:37:51,774 | INFO     | right removable region: 142
[2024-05-18 20:38:13] 2024-05-18 18:37:51,774 | INFO     | model: linear, x: [1716048751.0, 1716048812.0, 1716048873.0, 1716048934.0, 1716048995.0, 1716049056.0, 1716049117.0, 1716049178.0, 1716049239.0, 1716049300.0, 1716
[2024-05-18 20:38:13] 2024-05-18 18:37:51,775 | INFO     | sum of square deviations: 906703512.0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,775 | INFO     | sum of deviations: 30387196116.000008
[2024-05-18 20:38:13] 2024-05-18 18:37:51,775 | INFO     | mean x: 1716053082.0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,775 | INFO     | mean y: 2303051.286713287
[2024-05-18 20:38:13] 2024-05-18 18:37:51,775 | INFO     | -- intersect: -57509376189.016304
[2024-05-18 20:38:13] 2024-05-18 18:37:51,775 | INFO     | intersect: -57509376189.016304
[2024-05-18 20:38:13] 2024-05-18 18:37:51,775 | INFO     | chi2: 1.5788660975398074
[2024-05-18 20:38:13] 2024-05-18 18:37:51,776 | INFO     | current chi2=1.5788660975398074 (change=61.21577106342823 %)
[2024-05-18 20:38:13] 2024-05-18 18:37:51,776 | INFO     | model: linear, x: [1716049056.0, 1716049117.0, 1716049178.0, 1716049239.0, 1716049300.0, 1716049361.0, 1716049422.0, 1716049483.0, 1716049544.0, 1716049605.0, 1716
[2024-05-18 20:38:13] 2024-05-18 18:37:51,776 | INFO     | sum of square deviations: 814878534.5
[2024-05-18 20:38:13] 2024-05-18 18:37:51,776 | INFO     | sum of deviations: 3101077709.5
[2024-05-18 20:38:13] 2024-05-18 18:37:51,776 | INFO     | mean x: 1716053234.5
[2024-05-18 20:38:13] 2024-05-18 18:37:51,776 | INFO     | mean y: 2348399.1231884058
[2024-05-18 20:38:13] 2024-05-18 18:37:51,776 | INFO     | -- intersect: -6528213161.304474
[2024-05-18 20:38:13] 2024-05-18 18:37:51,776 | INFO     | intersect: -6528213161.304474
[2024-05-18 20:38:13] 2024-05-18 18:37:51,777 | INFO     | chi2: 0.06462140787684645
[2024-05-18 20:38:13] 2024-05-18 18:37:51,777 | INFO     | current chi2=0.06462140787684645 (change=95.90710016653473 %)
[2024-05-18 20:38:13] 2024-05-18 18:37:51,777 | INFO     | model: linear, x: [1716049361.0, 1716049422.0, 1716049483.0, 1716049544.0, 1716049605.0, 1716049666.0, 1716049727.0, 1716049788.0, 1716049849.0, 1716049910.0, 1716
[2024-05-18 20:38:13] 2024-05-18 18:37:51,777 | INFO     | sum of square deviations: 729472282.0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,777 | INFO     | sum of deviations: -907877639.9999998
[2024-05-18 20:38:13] 2024-05-18 18:37:51,777 | INFO     | mean x: 1716053387.0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,778 | INFO     | mean y: 2355436.1954887216
[2024-05-18 20:38:13] 2024-05-18 18:37:51,778 | INFO     | -- intersect: 2138100052.607886
[2024-05-18 20:38:13] 2024-05-18 18:37:51,778 | INFO     | intersect: 2138100052.607886
[2024-05-18 20:38:13] 2024-05-18 18:37:51,778 | INFO     | chi2: 0.0021411576628091854
[2024-05-18 20:38:13] 2024-05-18 18:37:51,778 | INFO     | current chi2=0.0021411576628091854 (change=96.68661248159474 %)
[2024-05-18 20:38:13] 2024-05-18 18:37:51,778 | INFO     | model: linear, x: [1716049666.0, 1716049727.0, 1716049788.0, 1716049849.0, 1716049910.0, 1716049971.0, 1716050032.0, 1716050093.0, 1716050154.0, 1716050215.0, 1716
[2024-05-18 20:38:13] 2024-05-18 18:37:51,778 | INFO     | sum of square deviations: 650252192.0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,779 | INFO     | sum of deviations: -1459404504.0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,779 | INFO     | mean x: 1716053539.5
[2024-05-18 20:38:13] 2024-05-18 18:37:51,779 | INFO     | mean y: 2356491.40625
[2024-05-18 20:38:13] 2024-05-18 18:37:51,779 | INFO     | -- intersect: 3853810274.204789
[2024-05-18 20:38:13] 2024-05-18 18:37:51,779 | INFO     | intersect: 3853810274.204789
[2024-05-18 20:38:13] 2024-05-18 18:37:51,779 | INFO     | chi2: 0.0010079937482860347
[2024-05-18 20:38:13] 2024-05-18 18:37:51,779 | INFO     | current chi2=0.0010079937482860347 (change=52.92295538089646 %)
[2024-05-18 20:38:13] 2024-05-18 18:37:51,779 | INFO     | model: linear, x: [1716049971.0, 1716050032.0, 1716050093.0, 1716050154.0, 1716050215.0, 1716050276.0, 1716050337.0, 1716050398.0, 1716050459.0, 1716050520.0, 1716
[2024-05-18 20:38:13] 2024-05-18 18:37:51,779 | INFO     | sum of square deviations: 576985702.0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,780 | INFO     | sum of deviations: -1494156204.0000005
[2024-05-18 20:38:13] 2024-05-18 18:37:51,780 | INFO     | mean x: 1716053692.0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,780 | INFO     | mean y: 2356564.5447154474
[2024-05-18 20:38:13] 2024-05-18 18:37:51,780 | INFO     | -- intersect: 4446231449.851503
[2024-05-18 20:38:13] 2024-05-18 18:37:51,780 | INFO     | intersect: 4446231449.851503
[2024-05-18 20:38:13] 2024-05-18 18:37:51,780 | INFO     | chi2: 0.000897082396204727
[2024-05-18 20:38:13] 2024-05-18 18:37:51,780 | INFO     | current chi2=0.000897082396204727 (change=11.003178568309412 %)
[2024-05-18 20:38:13] 2024-05-18 18:37:51,780 | INFO     | left removable region: 50
[2024-05-18 20:38:13] 2024-05-18 18:37:51,780 | INFO     | model: linear, x: [1716051496.0, 1716051557.0, 1716051618.0, 1716051679.0, 1716051740.0, 1716051801.0, 1716051862.0, 1716051923.0, 1716051984.0, 1716052045.0, 1716
[2024-05-18 20:38:13] 2024-05-18 18:37:51,780 | INFO     | sum of square deviations: 241429643.0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,781 | INFO     | sum of deviations: -537080904.9999999
[2024-05-18 20:38:13] 2024-05-18 18:37:51,781 | INFO     | mean x: 1716054271.5
[2024-05-18 20:38:13] 2024-05-18 18:37:51,781 | INFO     | mean y: 2354002.9782608696
[2024-05-18 20:38:13] 2024-05-18 18:37:51,781 | INFO     | -- intersect: 3819863608.3183784
[2024-05-18 20:38:13] 2024-05-18 18:37:51,781 | INFO     | intersect: 3819863608.3183784
[2024-05-18 20:38:13] 2024-05-18 18:37:51,781 | INFO     | chi2: 0.0004893883025500064
[2024-05-18 20:38:13] 2024-05-18 18:37:51,781 | INFO     | -- intersect: 3819863608.3183784
[2024-05-18 20:38:13] 2024-05-18 18:37:51,781 | INFO     | current memory leak: -2.22 B/s (using 92 data points, chi2=0.00)
[2024-05-18 20:38:13] 2024-05-18 18:37:51,781 | INFO     | ..............................
[2024-05-18 20:38:13] 2024-05-18 18:37:51,781 | INFO     | . Timing measurements:
[2024-05-18 20:38:13] 2024-05-18 18:37:51,781 | INFO     | . get job = 0 s
[2024-05-18 20:38:13] 2024-05-18 18:37:51,782 | INFO     | . initial setup = 1 s
[2024-05-18 20:38:13] 2024-05-18 18:37:51,782 | INFO     | . payload setup = 4 s
[2024-05-18 20:38:13] 2024-05-18 18:37:51,782 | INFO     | . stage-in = 0 s
[2024-05-18 20:38:13] 2024-05-18 18:37:51,782 | INFO     | . payload execution = 9020 s
[2024-05-18 20:38:13] 2024-05-18 18:37:51,782 | INFO     | . stage-out = 0 s
[2024-05-18 20:38:13] 2024-05-18 18:37:51,782 | INFO     | . log creation = 0 s
[2024-05-18 20:38:13] 2024-05-18 18:37:51,782 | INFO     | ..............................
[2024-05-18 20:38:13] 2024-05-18 18:37:51,835 | INFO     | 
[2024-05-18 20:38:13] 2024-05-18 18:37:51,836 | INFO     | job summary report
[2024-05-18 20:38:13] 2024-05-18 18:37:51,836 | INFO     | --------------------------------------------------
[2024-05-18 20:38:13] 2024-05-18 18:37:51,836 | INFO     | PanDA job id: 6205812248
[2024-05-18 20:38:13] 2024-05-18 18:37:51,836 | INFO     | task id: 38776125
[2024-05-18 20:38:13] 2024-05-18 18:37:51,836 | INFO     | errors: (none)
[2024-05-18 20:38:13] 2024-05-18 18:37:51,836 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 20:38:13] 2024-05-18 18:37:51,836 | INFO     | pilot state: finished 
[2024-05-18 20:38:13] 2024-05-18 18:37:51,836 | INFO     | transexitcode: 0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,836 | INFO     | exeerrorcode: 0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,836 | INFO     | exeerrordiag: 
[2024-05-18 20:38:13] 2024-05-18 18:37:51,836 | INFO     | exitcode: 0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | exitmsg: OK
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | cpuconsumptiontime: 33242 s
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | nevents: 400
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | neventsw: 0
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | pid: 873430
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | pgrp: 873430
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | corecount: 4
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | event service: False
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | sizes: {0: 2391299, 1: 2392234, 4: 2392440, 11: 2392468, 9028: 2420740, 9029: 2420739, 9030: 2429961, 9035: 2430075}
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | --------------------------------------------------
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | 
[2024-05-18 20:38:13] 2024-05-18 18:37:51,837 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/2
[2024-05-18 20:38:13] 2024-05-18 18:37:51,901 | WARNING  | process 873430 is no longer using CPU - aborting
[2024-05-18 20:38:13] 2024-05-18 18:37:51,901 | INFO     | aborting job monitoring since job object (job id=6205812248) has expired
[2024-05-18 20:38:13] 2024-05-18 18:37:51,918 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 20:38:13] 2024-05-18 18:37:51,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,920 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 20:38:13] 2024-05-18 18:37:51,920 | INFO     | job 6205812248 has completed (purged errors)
[2024-05-18 20:38:13] 2024-05-18 18:37:51,920 | INFO     | overall cleanup function is called
[2024-05-18 20:38:13] 2024-05-18 18:37:52,926 | INFO     | --- collectZombieJob: --- 10, [873430]
[2024-05-18 20:38:13] 2024-05-18 18:37:52,926 | INFO     | zombie collector waiting for pid 873430
[2024-05-18 20:38:13] 2024-05-18 18:37:52,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 20:38:13] 2024-05-18 18:37:53,932 | INFO     | collected zombie processes
[2024-05-18 20:38:13] 2024-05-18 18:37:53,932 | INFO     | will now attempt to kill all subprocesses of pid=873430
[2024-05-18 20:38:13] 2024-05-18 18:37:54,114 | INFO     | process IDs to be killed: [873430] (in reverse order)
[2024-05-18 20:38:13] 2024-05-18 18:37:54,233 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 20:38:13] 2024-05-18 18:37:54,233 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 20:38:13] 2024-05-18 18:37:54,240 | INFO     | did not find any defunct processes belonging to 873430
[2024-05-18 20:38:13] 2024-05-18 18:37:54,246 | INFO     | did not find any defunct processes belonging to 873430
[2024-05-18 20:38:13] 2024-05-18 18:37:54,246 | INFO     | ready for new job
[2024-05-18 20:38:13] 2024-05-18 18:37:54,246 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 20:38:13] 2024-05-18 18:37:54,247 | INFO     | *************************************
[2024-05-18 20:38:13] 2024-05-18 18:37:54,247 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 20:38:13] 2024-05-18 18:37:54,247 | INFO     | *************************************
[2024-05-18 20:38:13] 2024-05-18 18:37:54,247 | INFO     | 
[2024-05-18 20:38:13] 2024-05-18 18:37:54,250 | INFO     | architecture information:
[2024-05-18 20:38:13] 2024-05-18 18:37:54,250 | INFO     | executing command: cat /etc/os-release
[2024-05-18 20:38:13] 2024-05-18 18:37:54,265 | INFO     | cat /etc/os-release:
[2024-05-18 20:38:13] NAME="CentOS Linux"
[2024-05-18 20:38:13] VERSION="7 (Core)"
[2024-05-18 20:38:13] ID="centos"
[2024-05-18 20:38:13] ID_LIKE="rhel fedora"
[2024-05-18 20:38:13] VERSION_ID="7"
[2024-05-18 20:38:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 20:38:13] ANSI_COLOR="0;31"
[2024-05-18 20:38:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 20:38:13] HOME_URL="https://www.centos.org/"
[2024-05-18 20:38:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 20:38:13] 
[2024-05-18 20:38:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 20:38:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 20:38:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 20:38:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 20:38:13] 
[2024-05-18 20:38:13] 2024-05-18 18:37:54,265 | INFO     | *************************************
[2024-05-18 20:38:13] 2024-05-18 18:37:54,768 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/2
[2024-05-18 20:38:13] 2024-05-18 18:37:54,786 | INFO     | sufficient remaining disk space (562287345664 B)
[2024-05-18 20:38:13] 2024-05-18 18:37:54,786 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 20:38:13] 2024-05-18 18:37:54,787 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 20:38:13] 2024-05-18 18:37:54,862 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 20:38:13] 2024-05-18 18:37:55,318 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 20:38:13] 2024-05-18 18:37:55,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 20:38:13] 2024-05-18 18:37:55,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 20:38:13] 2024-05-18 18:37:55,367 | INFO     | all payload control threads have been joined
[2024-05-18 20:38:13] 2024-05-18 18:37:55,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 20:38:13] 2024-05-18 18:37:55,413 | INFO     | aborting loop
[2024-05-18 20:38:13] 2024-05-18 18:37:55,491 | INFO     | all data control threads have been joined
[2024-05-18 20:38:13] 2024-05-18 18:37:55,791 | INFO     | [job] retrieve thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:55,878 | INFO     | all job control threads have been joined
[2024-05-18 20:38:13] 2024-05-18 18:37:56,212 | INFO     | [payload] failed_post thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:56,249 | INFO     | [data] copytool_in thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:56,372 | INFO     | [payload] control thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:56,418 | INFO     | [job] job monitor thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:56,497 | INFO     | [data] control thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:56,610 | INFO     | [job] validate thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:56,719 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:56,761 | INFO     | [payload] validate_post thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:56,846 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 20:38:13] 2024-05-18 18:37:56,868 | INFO     | [data] copytool_out thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:56,883 | INFO     | [job] control thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:56,962 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:57,056 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:37:57,564 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 20:38:13] 2024-05-18 18:37:57,851 | INFO     | [job] queue monitor thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:38:01,570 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:38:05,043 | INFO     | job.realtimelogging is not enabled
[2024-05-18 20:38:13] 2024-05-18 18:38:06,048 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 20:38:13] 2024-05-18 18:38:07,170 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47699647714368)>', '<ExcThread(monitor, started 47699823167232)>']
[2024-05-18 20:38:13] 2024-05-18 18:38:07,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 20:38:13] 2024-05-18 18:38:07,375 | INFO     | [monitor] control thread has ended
[2024-05-18 20:38:13] 2024-05-18 18:38:12,195 | INFO     | all workflow threads have been joined
[2024-05-18 20:38:13] 2024-05-18 18:38:12,195 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 20:38:13] 2024-05-18 18:38:12,195 | INFO     | traces error code: 0
[2024-05-18 20:38:13] 2024-05-18 18:38:12,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 20:38:13] 2024-05-18 18:38:12,271 [wrapper] ==== pilot stdout END ====
[2024-05-18 20:38:13] 2024-05-18 18:38:12,274 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 20:38:13] 2024-05-18 18:38:12,276 [wrapper] pilotpid: 866357
[2024-05-18 20:38:13] 2024-05-18 18:38:12,278 [wrapper] Pilot exit status: 0
[2024-05-18 20:38:13] 2024-05-18 18:38:12,287 [wrapper] pandaids: 6205812248
[2024-05-18 20:38:13] 2024-05-18 18:38:12,356 [wrapper] cleanup: SIGTERM to supervisor_pilot 1132423 866358
[2024-05-18 20:38:13] 2024-05-18 18:38:12,358 [wrapper] Test setup, not cleaning
[2024-05-18 20:38:13] 2024-05-18 18:38:12,360 [wrapper] ==== wrapper stdout END ====
[2024-05-18 20:38:13] 2024-05-18 18:38:12,362 [wrapper] ==== wrapper stderr END ====
[2024-05-18 20:38:13] 2024-05-18 18:38:12,366 [wrapper] apfmon messages muted
[2024-05-18 20:38:13]  *** Error codes and diagnostics ***
[2024-05-18 20:38:13]     "exeErrorCode": 0,
[2024-05-18 20:38:13]     "exeErrorDiag": "",
[2024-05-18 20:38:13]     "pilotErrorCode": 0,
[2024-05-18 20:38:13]     "pilotErrorDiag": "",
[2024-05-18 20:38:13]  *** Listing of results directory ***
[2024-05-18 20:38:13] total 871872
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc    467845 May 13 08:49 pilot3.tar.gz
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc      5633 May 13 08:53 queuedata.json
[2024-05-18 20:38:13] -rwx------ 1 boinc boinc     32251 May 13 08:54 runpilot2-wrapper.sh
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc       100 May 18 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 20:38:13] -rwxr-xr-x 1 boinc boinc      7986 May 18 05:23 run_atlas
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc       105 May 18 05:23 job.xml
[2024-05-18 20:38:13] -rw------- 2 boinc boinc  18743296 May 18 05:28 copy_mSou47
[2024-05-18 20:38:13] -rw------- 2 boinc boinc  20119552 May 18 07:43 copy_fvHaev
[2024-05-18 20:38:13] -rw------- 2 boinc boinc   3080192 May 18 14:00 copy_DT86og
[2024-05-18 20:38:13] -rw-r--r-- 2 boinc boinc 598737227 May 18 18:06 EVNT.38776119._000152.pool.root.1
[2024-05-18 20:38:13] -rw-r--r-- 2 boinc boinc     17537 May 18 18:06 start_atlas.sh
[2024-05-18 20:38:13] drwxrwx--x 2 boinc boinc      4096 May 18 18:06 shared
[2024-05-18 20:38:13] -rw-r--r-- 2 boinc boinc    480009 May 18 18:06 input.tar.gz
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc         0 May 18 18:06 boinc_lockfile
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc      2634 May 18 18:06 pandaJob.out
[2024-05-18 20:38:13] -rw------- 1 boinc boinc       424 May 18 18:06 setup.sh.local
[2024-05-18 20:38:13] -rw------- 1 boinc boinc   1019426 May 18 18:07 agis_schedconf.cvmfs.json
[2024-05-18 20:38:13] -rw------- 1 boinc boinc         0 May 18 18:07 agis_ddmendpoints.agis.ALL.json
[2024-05-18 20:38:13] -rw------- 1 boinc boinc   1324701 May 18 18:07 cric_ddmendpoints.json
[2024-05-18 20:38:13] drwx------ 4 boinc boinc      4096 May 18 18:07 pilot3
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc      6668 May 18 18:54 init_data.xml
[2024-05-18 20:38:13] -rw------- 1 boinc boinc 246077541 May 18 20:37 HITS.38776125._003326.pool.root.1
[2024-05-18 20:38:13] -rw------- 1 boinc boinc        95 May 18 20:37 pilot_heartbeat.json
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc       530 May 18 20:37 boinc_task_state.xml
[2024-05-18 20:38:13] -rw------- 1 boinc boinc      1049 May 18 20:37 memory_monitor_summary.json
[2024-05-18 20:38:13] -rw------- 1 boinc boinc    282727 May 18 20:37 log.38776125._003326.job.log.tgz.1
[2024-05-18 20:38:13] -rw------- 1 boinc boinc      7759 May 18 20:37 heartbeat.json
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc      8192 May 18 20:37 boinc_mmap_file
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc        27 May 18 20:37 wrapper_checkpoint.txt
[2024-05-18 20:38:13] -rw------- 1 boinc boinc      4293 May 18 20:38 pilotlog.txt
[2024-05-18 20:38:13] -rw------- 1 boinc boinc    969553 May 18 20:38 log.38776125._003326.job.log.1
[2024-05-18 20:38:13] -rw------- 1 boinc boinc       357 May 18 20:38 output.list
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc       620 May 18 20:38 runtime_log
[2024-05-18 20:38:13] -rw------- 1 boinc boinc   1269760 May 18 20:38 result.tar.gz
[2024-05-18 20:38:13] -rw------- 1 boinc boinc       655 May 18 20:38 ww6LDmjkeQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmATGKDmBXz2gm.diag
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc     11409 May 18 20:38 runtime_log.err
[2024-05-18 20:38:13] -rw-r--r-- 1 boinc boinc     21360 May 18 20:38 stderr.txt
[2024-05-18 20:38:13] HITS file was successfully produced:
[2024-05-18 20:38:13] -rw------- 1 boinc boinc 246077541 May 18 20:37 shared/HITS.pool.root.1
[2024-05-18 20:38:13]  *** Contents of shared directory: ***
[2024-05-18 20:38:13] total 867720
[2024-05-18 20:38:13] -rw------- 2 boinc boinc  18743296 May 18 05:28 copy_mSou47
[2024-05-18 20:38:13] -rw------- 2 boinc boinc  20119552 May 18 07:43 copy_fvHaev
[2024-05-18 20:38:13] -rw------- 2 boinc boinc   3080192 May 18 14:00 copy_DT86og
[2024-05-18 20:38:13] -rw-r--r-- 2 boinc boinc 598737227 May 18 18:06 ATLAS.root_0
[2024-05-18 20:38:13] -rw-r--r-- 2 boinc boinc     17537 May 18 18:06 start_atlas.sh
[2024-05-18 20:38:13] -rw-r--r-- 2 boinc boinc    480009 May 18 18:06 input.tar.gz
[2024-05-18 20:38:13] -rw------- 1 boinc boinc 246077541 May 18 20:37 HITS.pool.root.1
[2024-05-18 20:38:13] -rw------- 1 boinc boinc   1269760 May 18 20:38 result.tar.gz
20:38:14 (859834): run_atlas exited; CPU time 33027.821176
20:38:14 (859834): called boinc_finish(0)

</stderr_txt>
]]>

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