Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:03:32 (2478508): wrapper (7.7.26015): starting
10:03:32 (2478508): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 10:03:32] Arguments: --nthreads 4
[2024-05-16 10:03:32] Threads: 4
[2024-05-16 10:03:32] Checking for CVMFS
[2024-05-16 10:03:32] No cvmfs_config command found, will try listing directly
[2024-05-16 10:03:32] CVMFS is ok
[2024-05-16 10:03:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 10:03:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 10:03:32] Further information can be found at the LHC@home message board.
[2024-05-16 10:03:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 10:03:32] Checking for apptainer binary...
[2024-05-16 10:03:32] which: no apptainer in ((null))
[2024-05-16 10:03:32] apptainer is not installed, using version from CVMFS
[2024-05-16 10:03:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 10:03:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot124/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-16 10:03:33] apptainer works
[2024-05-16 10:03:33] Set ATHENA_PROC_NUMBER=4
[2024-05-16 10:03:33] Set ATHENA_CORE_NUMBER=4
[2024-05-16 10:03:33] Starting ATLAS job with PandaID=6205812403
[2024-05-16 10:03:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot124/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 13:04:29]  *** The last 200 lines of the pilot log: ***
[2024-05-16 13:04:29] 2024-05-16 11:04:16,046 | INFO     | -- intersect: -4377027807.0094185
[2024-05-16 13:04:29] 2024-05-16 11:04:16,047 | INFO     | intersect: -4377027807.0094185
[2024-05-16 13:04:29] 2024-05-16 11:04:16,047 | INFO     | chi2: 0.05269394005774449
[2024-05-16 13:04:29] 2024-05-16 11:04:16,047 | INFO     | current chi2=0.05269394005774449 (change=95.67490226301273 %)
[2024-05-16 13:04:29] 2024-05-16 11:04:16,047 | INFO     | model: linear, x: [1715847574.0, 1715847635.0, 1715847696.0, 1715847757.0, 1715847818.0, 1715847879.0, 1715847940.0, 1715848001.0, 1715848062.0, 1715848123.0, 1715
[2024-05-16 13:04:29] 2024-05-16 11:04:16,047 | INFO     | sum of square deviations: 1318277740.5
[2024-05-16 13:04:29] 2024-05-16 11:04:16,047 | INFO     | sum of deviations: 253729926.99999988
[2024-05-16 13:04:29] 2024-05-16 11:04:16,047 | INFO     | mean x: 1715852484.5
[2024-05-16 13:04:29] 2024-05-16 11:04:16,047 | INFO     | mean y: 2342258.592592593
[2024-05-16 13:04:29] 2024-05-16 11:04:16,047 | INFO     | -- intersect: -327909184.07367563
[2024-05-16 13:04:29] 2024-05-16 11:04:16,048 | INFO     | intersect: -327909184.07367563
[2024-05-16 13:04:29] 2024-05-16 11:04:16,048 | INFO     | chi2: 0.001231775475859371
[2024-05-16 13:04:29] 2024-05-16 11:04:16,048 | INFO     | current chi2=0.001231775475859371 (change=97.66239633151453 %)
[2024-05-16 13:04:29] 2024-05-16 11:04:16,048 | INFO     | model: linear, x: [1715847879.0, 1715847940.0, 1715848001.0, 1715848062.0, 1715848123.0, 1715848184.0, 1715848245.0, 1715848306.0, 1715848367.0, 1715848428.0, 1715
[2024-05-16 13:04:29] 2024-05-16 11:04:16,048 | INFO     | sum of square deviations: 1199940638.0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,048 | INFO     | sum of deviations: 949146397.0000004
[2024-05-16 13:04:29] 2024-05-16 11:04:16,048 | INFO     | mean x: 1715852637.0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,048 | INFO     | mean y: 2341358.4904458597
[2024-05-16 13:04:29] 2024-05-16 11:04:16,048 | INFO     | -- intersect: -1354888571.5717275
[2024-05-16 13:04:29] 2024-05-16 11:04:16,049 | INFO     | intersect: -1354888571.5717275
[2024-05-16 13:04:29] 2024-05-16 11:04:16,049 | INFO     | chi2: 0.00029801766237295176
[2024-05-16 13:04:29] 2024-05-16 11:04:16,049 | INFO     | current chi2=0.00029801766237295176 (change=75.80584544719612 %)
[2024-05-16 13:04:29] 2024-05-16 11:04:16,049 | INFO     | model: linear, x: [1715848184.0, 1715848245.0, 1715848306.0, 1715848367.0, 1715848428.0, 1715848489.0, 1715848550.0, 1715848611.0, 1715848672.0, 1715848733.0, 1715
[2024-05-16 13:04:29] 2024-05-16 11:04:16,049 | INFO     | sum of square deviations: 1088905998.0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,049 | INFO     | sum of deviations: 1097936194.0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,049 | INFO     | mean x: 1715852789.5
[2024-05-16 13:04:29] 2024-05-16 11:04:16,049 | INFO     | mean y: 2341152.75
[2024-05-16 13:04:29] 2024-05-16 11:04:16,049 | INFO     | -- intersect: -1727741044.0861619
[2024-05-16 13:04:29] 2024-05-16 11:04:16,049 | INFO     | intersect: -1727741044.0861619
[2024-05-16 13:04:29] 2024-05-16 11:04:16,050 | INFO     | chi2: 0.00018027557789395443
[2024-05-16 13:04:29] 2024-05-16 11:04:16,050 | INFO     | current chi2=0.00018027557789395443 (change=39.508424950884276 %)
[2024-05-16 13:04:29] 2024-05-16 11:04:16,050 | INFO     | model: linear, x: [1715848489.0, 1715848550.0, 1715848611.0, 1715848672.0, 1715848733.0, 1715848794.0, 1715848855.0, 1715848916.0, 1715848977.0, 1715849038.0, 1715
[2024-05-16 13:04:29] 2024-05-16 11:04:16,050 | INFO     | sum of square deviations: 984941258.0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,050 | INFO     | sum of deviations: 1248945537.0000005
[2024-05-16 13:04:29] 2024-05-16 11:04:16,050 | INFO     | mean x: 1715852942.0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,050 | INFO     | mean y: 2340931.9455782315
[2024-05-16 13:04:29] 2024-05-16 11:04:16,050 | INFO     | -- intersect: -2173430320.0484376
[2024-05-16 13:04:29] 2024-05-16 11:04:16,050 | INFO     | intersect: -2173430320.0484376
[2024-05-16 13:04:29] 2024-05-16 11:04:16,051 | INFO     | chi2: 5.1743485163302026e-05
[2024-05-16 13:04:29] 2024-05-16 11:04:16,051 | INFO     | current chi2=5.1743485163302026e-05 (change=71.2975624497847 %)
[2024-05-16 13:04:29] 2024-05-16 11:04:16,051 | INFO     | model: linear, x: [1715848794.0, 1715848855.0, 1715848916.0, 1715848977.0, 1715849038.0, 1715849099.0, 1715849160.0, 1715849221.0, 1715849282.0, 1715849343.0, 1715
[2024-05-16 13:04:29] 2024-05-16 11:04:16,051 | INFO     | sum of square deviations: 887813855.5
[2024-05-16 13:04:29] 2024-05-16 11:04:16,051 | INFO     | sum of deviations: 1189053602.0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,051 | INFO     | mean x: 1715853094.5
[2024-05-16 13:04:29] 2024-05-16 11:04:16,051 | INFO     | mean y: 2341026.2535211267
[2024-05-16 13:04:29] 2024-05-16 11:04:16,051 | INFO     | -- intersect: -2295709730.5338306
[2024-05-16 13:04:29] 2024-05-16 11:04:16,051 | INFO     | intersect: -2295709730.5338306
[2024-05-16 13:04:29] 2024-05-16 11:04:16,051 | INFO     | chi2: 4.2287487249655123e-05
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | current chi2=4.2287487249655123e-05 (change=18.274760356407864 %)
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | left removable region: 70
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | model: linear, x: [1715850929.0, 1715850990.0, 1715851051.0, 1715851112.0, 1715851173.0, 1715851234.0, 1715851295.0, 1715851356.0, 1715851417.0, 1715851478.0, 1715
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | sum of square deviations: 319447850.0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | sum of deviations: 535750861.0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | mean x: 1715853979.0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | mean y: 2342078.4356435644
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | -- intersect: -2875342797.513673
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | intersect: -2875342797.513673
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | chi2: 1.9832864690313152e-05
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | -- intersect: -2875342797.513673
[2024-05-16 13:04:29] 2024-05-16 11:04:16,052 | INFO     | current memory leak: 1.68 B/s (using 101 data points, chi2=0.00)
[2024-05-16 13:04:29] 2024-05-16 11:04:16,053 | INFO     | ..............................
[2024-05-16 13:04:29] 2024-05-16 11:04:16,053 | INFO     | . Timing measurements:
[2024-05-16 13:04:29] 2024-05-16 11:04:16,053 | INFO     | . get job = 0 s
[2024-05-16 13:04:29] 2024-05-16 11:04:16,053 | INFO     | . initial setup = 1 s
[2024-05-16 13:04:29] 2024-05-16 11:04:16,053 | INFO     | . payload setup = 7 s
[2024-05-16 13:04:29] 2024-05-16 11:04:16,053 | INFO     | . stage-in = 0 s
[2024-05-16 13:04:29] 2024-05-16 11:04:16,053 | INFO     | . payload execution = 10787 s
[2024-05-16 13:04:29] 2024-05-16 11:04:16,053 | INFO     | . stage-out = 0 s
[2024-05-16 13:04:29] 2024-05-16 11:04:16,053 | INFO     | . log creation = 0 s
[2024-05-16 13:04:29] 2024-05-16 11:04:16,053 | INFO     | ..............................
[2024-05-16 13:04:29] 2024-05-16 11:04:16,106 | INFO     | 
[2024-05-16 13:04:29] 2024-05-16 11:04:16,106 | INFO     | job summary report
[2024-05-16 13:04:29] 2024-05-16 11:04:16,106 | INFO     | --------------------------------------------------
[2024-05-16 13:04:29] 2024-05-16 11:04:16,106 | INFO     | PanDA job id: 6205812403
[2024-05-16 13:04:29] 2024-05-16 11:04:16,106 | INFO     | task id: 38776125
[2024-05-16 13:04:29] 2024-05-16 11:04:16,106 | INFO     | errors: (none)
[2024-05-16 13:04:29] 2024-05-16 11:04:16,106 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | pilot state: finished 
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | transexitcode: 0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | exeerrorcode: 0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | exeerrordiag: 
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | exitcode: 0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | exitmsg: OK
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | cpuconsumptiontime: 40368 s
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | nevents: 400
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | neventsw: 0
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | pid: 2490798
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | pgrp: 2490798
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | corecount: 4
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | event service: False
[2024-05-16 13:04:29] 2024-05-16 11:04:16,107 | INFO     | sizes: {0: 2392207, 6: 2392413, 11: 2392441, 10798: 2421471, 10800: 2430455, 10803: 2430511, 10811: 2430809}
[2024-05-16 13:04:29] 2024-05-16 11:04:16,108 | INFO     | --------------------------------------------------
[2024-05-16 13:04:29] 2024-05-16 11:04:16,108 | INFO     | 
[2024-05-16 13:04:29] 2024-05-16 11:04:16,108 | INFO     | executing command: ls -lF /scratch/boinc/var/slot124/slots/1
[2024-05-16 13:04:29] 2024-05-16 11:04:16,130 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,131 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,131 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,131 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,131 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,131 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,131 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,131 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,131 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,132 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,132 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,132 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,132 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,132 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 13:04:29] 2024-05-16 11:04:16,132 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,132 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 13:04:29] 2024-05-16 11:04:16,132 | INFO     | job 6205812403 has completed (purged errors)
[2024-05-16 13:04:29] 2024-05-16 11:04:16,132 | INFO     | overall cleanup function is called
[2024-05-16 13:04:29] 2024-05-16 11:04:17,139 | INFO     | --- collectZombieJob: --- 10, [2490798]
[2024-05-16 13:04:29] 2024-05-16 11:04:17,139 | INFO     | zombie collector waiting for pid 2490798
[2024-05-16 13:04:29] 2024-05-16 11:04:17,139 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 13:04:29] 2024-05-16 11:04:18,144 | INFO     | collected zombie processes
[2024-05-16 13:04:29] 2024-05-16 11:04:18,144 | INFO     | will now attempt to kill all subprocesses of pid=2490798
[2024-05-16 13:04:29] 2024-05-16 11:04:18,340 | INFO     | process IDs to be killed: [2490798] (in reverse order)
[2024-05-16 13:04:29] 2024-05-16 11:04:18,501 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 13:04:29] 2024-05-16 11:04:18,501 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 13:04:29] 2024-05-16 11:04:18,516 | INFO     | did not find any defunct processes belonging to 2490798
[2024-05-16 13:04:29] 2024-05-16 11:04:18,525 | INFO     | did not find any defunct processes belonging to 2490798
[2024-05-16 13:04:29] 2024-05-16 11:04:18,525 | INFO     | ready for new job
[2024-05-16 13:04:29] 2024-05-16 11:04:18,525 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 13:04:29] 2024-05-16 11:04:18,527 | INFO     | *************************************
[2024-05-16 13:04:29] 2024-05-16 11:04:18,527 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 13:04:29] 2024-05-16 11:04:18,527 | INFO     | *************************************
[2024-05-16 13:04:29] 2024-05-16 11:04:18,527 | INFO     | 
[2024-05-16 13:04:29] 2024-05-16 11:04:18,531 | INFO     | architecture information:
[2024-05-16 13:04:29] 2024-05-16 11:04:18,531 | INFO     | executing command: cat /etc/os-release
[2024-05-16 13:04:29] 2024-05-16 11:04:18,548 | INFO     | cat /etc/os-release:
[2024-05-16 13:04:29] NAME="CentOS Linux"
[2024-05-16 13:04:29] VERSION="7 (Core)"
[2024-05-16 13:04:29] ID="centos"
[2024-05-16 13:04:29] ID_LIKE="rhel fedora"
[2024-05-16 13:04:29] VERSION_ID="7"
[2024-05-16 13:04:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 13:04:29] ANSI_COLOR="0;31"
[2024-05-16 13:04:29] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 13:04:29] HOME_URL="https://www.centos.org/"
[2024-05-16 13:04:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 13:04:29] 
[2024-05-16 13:04:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 13:04:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 13:04:29] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 13:04:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 13:04:29] 
[2024-05-16 13:04:29] 2024-05-16 11:04:18,548 | INFO     | *************************************
[2024-05-16 13:04:29] 2024-05-16 11:04:19,050 | INFO     | executing command: df -mP /scratch/boinc/var/slot124/slots/1
[2024-05-16 13:04:29] 2024-05-16 11:04:19,072 | INFO     | sufficient remaining disk space (2975322865664 B)
[2024-05-16 13:04:29] 2024-05-16 11:04:19,073 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 13:04:29] 2024-05-16 11:04:19,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 13:04:29] 2024-05-16 11:04:19,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 13:04:29] 2024-05-16 11:04:19,074 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 13:04:29] 2024-05-16 11:04:19,074 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 13:04:29] 2024-05-16 11:04:19,075 | INFO     | aborting loop
[2024-05-16 13:04:29] 2024-05-16 11:04:19,205 | INFO     | all payload control threads have been joined
[2024-05-16 13:04:29] 2024-05-16 11:04:19,392 | INFO     | all data control threads have been joined
[2024-05-16 13:04:29] 2024-05-16 11:04:19,590 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 13:04:29] 2024-05-16 11:04:19,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 13:04:29] 2024-05-16 11:04:19,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 13:04:29] 2024-05-16 11:04:19,600 | INFO     | all job control threads have been joined
[2024-05-16 13:04:29] 2024-05-16 11:04:20,078 | INFO     | [job] retrieve thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:20,079 | INFO     | [job] job monitor thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:20,210 | INFO     | [payload] control thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:20,397 | INFO     | [data] control thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:20,446 | INFO     | [payload] validate_post thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:20,456 | INFO     | [data] copytool_in thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:20,605 | INFO     | [job] control thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:20,659 | INFO     | [payload] failed_post thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:20,707 | INFO     | [job] validate thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:20,879 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:20,934 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:21,079 | INFO     | [data] copytool_out thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:21,115 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 13:04:29] 2024-05-16 11:04:21,260 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:21,297 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:22,120 | INFO     | [job] queue monitor thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:23,079 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 13:04:29] 2024-05-16 11:04:23,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47740842009664)>', '<ExcThread(monitor, started 47741013522176)>']
[2024-05-16 13:04:29] 2024-05-16 11:04:23,610 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 13:04:29] 2024-05-16 11:04:23,610 | INFO     | [monitor] control thread has ended
[2024-05-16 13:04:29] 2024-05-16 11:04:28,493 | INFO     | all workflow threads have been joined
[2024-05-16 13:04:29] 2024-05-16 11:04:28,493 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 13:04:29] 2024-05-16 11:04:28,494 | INFO     | traces error code: 0
[2024-05-16 13:04:29] 2024-05-16 11:04:28,494 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 13:04:29] 2024-05-16 11:04:28,564 [wrapper] ==== pilot stdout END ====
[2024-05-16 13:04:29] 2024-05-16 11:04:28,567 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 13:04:29] 2024-05-16 11:04:28,569 [wrapper] pilotpid: 2483139
[2024-05-16 13:04:29] 2024-05-16 11:04:28,573 [wrapper] Pilot exit status: 0
[2024-05-16 13:04:29] 2024-05-16 11:04:28,581 [wrapper] pandaids: 6205812403
[2024-05-16 13:04:29] 2024-05-16 11:04:28,658 [wrapper] cleanup: SIGTERM to supervisor_pilot 3512928 2483140
[2024-05-16 13:04:29] 2024-05-16 11:04:28,663 [wrapper] Test setup, not cleaning
[2024-05-16 13:04:29] 2024-05-16 11:04:28,668 [wrapper] ==== wrapper stdout END ====
[2024-05-16 13:04:29] 2024-05-16 11:04:28,670 [wrapper] ==== wrapper stderr END ====
[2024-05-16 13:04:29] 2024-05-16 11:04:28,674 [wrapper] apfmon messages muted
[2024-05-16 13:04:29]  *** Error codes and diagnostics ***
[2024-05-16 13:04:29]     "exeErrorCode": 0,
[2024-05-16 13:04:29]     "exeErrorDiag": "",
[2024-05-16 13:04:29]     "pilotErrorCode": 0,
[2024-05-16 13:04:29]     "pilotErrorDiag": "",
[2024-05-16 13:04:29]  *** Listing of results directory ***
[2024-05-16 13:04:29] total 830092
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc    467845 May 13 08:49 pilot3.tar.gz
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc      5633 May 13 08:53 queuedata.json
[2024-05-16 13:04:29] -rwx------ 1 boinc boinc     32251 May 13 08:53 runpilot2-wrapper.sh
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc       100 May 16 10:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 13:04:29] -rwxr-xr-x 1 boinc boinc      7986 May 16 10:03 run_atlas
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc       105 May 16 10:03 job.xml
[2024-05-16 13:04:29] -rw-r--r-- 2 boinc boinc 601195704 May 16 10:03 EVNT.38776119._000158.pool.root.1
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc      6644 May 16 10:03 init_data.xml
[2024-05-16 13:04:29] -rw-r--r-- 2 boinc boinc     17537 May 16 10:03 start_atlas.sh
[2024-05-16 13:04:29] drwxrwx--x 2 boinc boinc      4096 May 16 10:03 shared
[2024-05-16 13:04:29] -rw-r--r-- 2 boinc boinc    480003 May 16 10:03 input.tar.gz
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc         0 May 16 10:03 boinc_lockfile
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc      2634 May 16 10:03 pandaJob.out
[2024-05-16 13:04:29] -rw------- 1 boinc boinc       424 May 16 10:03 setup.sh.local
[2024-05-16 13:04:29] -rw------- 1 boinc boinc   1010273 May 16 10:03 agis_schedconf.cvmfs.json
[2024-05-16 13:04:29] -rw------- 1 boinc boinc   1324701 May 16 10:03 cric_ddmendpoints.json
[2024-05-16 13:04:29] drwx------ 4 boinc boinc      4096 May 16 10:03 pilot3
[2024-05-16 13:04:29] -rw------- 1 boinc boinc        95 May 16 13:03 pilot_heartbeat.json
[2024-05-16 13:04:29] -rw------- 1 boinc boinc 242393418 May 16 13:03 HITS.38776125._003479.pool.root.1
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc       532 May 16 13:03 boinc_task_state.xml
[2024-05-16 13:04:29] -rw------- 1 boinc boinc      1039 May 16 13:04 memory_monitor_summary.json
[2024-05-16 13:04:29] -rw------- 1 boinc boinc         0 May 16 13:04 agis_ddmendpoints.agis.ALL.json
[2024-05-16 13:04:29] -rw------- 1 boinc boinc    303598 May 16 13:04 log.38776125._003479.job.log.tgz.1
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc      8192 May 16 13:04 boinc_mmap_file
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc        28 May 16 13:04 wrapper_checkpoint.txt
[2024-05-16 13:04:29] -rw------- 1 boinc boinc      7717 May 16 13:04 heartbeat.json
[2024-05-16 13:04:29] -rw------- 1 boinc boinc      4223 May 16 13:04 pilotlog.txt
[2024-05-16 13:04:29] -rw------- 1 boinc boinc   1142836 May 16 13:04 log.38776125._003479.job.log.1
[2024-05-16 13:04:29] -rw------- 1 boinc boinc       357 May 16 13:04 output.list
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc       620 May 16 13:04 runtime_log
[2024-05-16 13:04:29] -rw------- 1 boinc boinc   1464320 May 16 13:04 result.tar.gz
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc     11429 May 16 13:04 runtime_log.err
[2024-05-16 13:04:29] -rw------- 1 boinc boinc       660 May 16 13:04 2ZiMDmVkeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmkcJKDmFcvfam.diag
[2024-05-16 13:04:29] -rw-r--r-- 1 boinc boinc     21361 May 16 13:04 stderr.txt
[2024-05-16 13:04:29] HITS file was successfully produced:
[2024-05-16 13:04:29] -rw------- 1 boinc boinc 242393418 May 16 13:03 shared/HITS.pool.root.1
[2024-05-16 13:04:29]  *** Contents of shared directory: ***
[2024-05-16 13:04:29] total 825756
[2024-05-16 13:04:29] -rw-r--r-- 2 boinc boinc 601195704 May 16 10:03 ATLAS.root_0
[2024-05-16 13:04:29] -rw-r--r-- 2 boinc boinc     17537 May 16 10:03 start_atlas.sh
[2024-05-16 13:04:29] -rw-r--r-- 2 boinc boinc    480003 May 16 10:03 input.tar.gz
[2024-05-16 13:04:29] -rw------- 1 boinc boinc 242393418 May 16 13:03 HITS.pool.root.1
[2024-05-16 13:04:29] -rw------- 1 boinc boinc   1464320 May 16 13:04 result.tar.gz
13:04:30 (2478508): run_atlas exited; CPU time 39886.551589
13:04:30 (2478508): called boinc_finish(0)

</stderr_txt>
]]>

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