Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:44:54 (382485): wrapper (7.7.26015): starting
03:44:54 (382485): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 03:44:54] Arguments: --nthreads 4
[2024-05-16 03:44:54] Threads: 4
[2024-05-16 03:44:54] Checking for CVMFS
[2024-05-16 03:44:54] No cvmfs_config command found, will try listing directly
[2024-05-16 03:44:54] CVMFS is ok
[2024-05-16 03:44:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 03:44:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 03:44:54] Further information can be found at the LHC@home message board.
[2024-05-16 03:44:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 03:44:54] Checking for apptainer binary...
[2024-05-16 03:44:54] which: no apptainer in ((null))
[2024-05-16 03:44:54] apptainer is not installed, using version from CVMFS
[2024-05-16 03:44:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 03:44:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-16 03:44:55] apptainer works
[2024-05-16 03:44:55] Set ATHENA_PROC_NUMBER=4
[2024-05-16 03:44:55] Set ATHENA_CORE_NUMBER=4
[2024-05-16 03:44:55] Starting ATLAS job with PandaID=6205810794
[2024-05-16 03:44:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 07:12:33]  *** The last 200 lines of the pilot log: ***
[2024-05-16 07:12:33] 2024-05-16 05:12:10,680 | INFO     | intersect: -5943440887.067045
[2024-05-16 07:12:33] 2024-05-16 05:12:10,680 | INFO     | chi2: 0.05527630383305815
[2024-05-16 07:12:33] 2024-05-16 05:12:10,681 | INFO     | current chi2=0.05527630383305815 (change=96.28961976984787 %)
[2024-05-16 07:12:33] 2024-05-16 05:12:10,681 | INFO     | model: linear, x: [1715824850.0, 1715824911.0, 1715824972.0, 1715825033.0, 1715825094.0, 1715825155.0, 1715825216.0, 1715825277.0, 1715825338.0, 1715825399.0, 1715
[2024-05-16 07:12:33] 2024-05-16 05:12:10,681 | INFO     | sum of square deviations: 2060343747.0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,682 | INFO     | sum of deviations: 3272567040.0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,682 | INFO     | mean x: 1715830553.5
[2024-05-16 07:12:33] 2024-05-16 05:12:10,682 | INFO     | mean y: 2351071.989361702
[2024-05-16 07:12:33] 2024-05-16 05:12:10,682 | INFO     | -- intersect: -2723005084.6156344
[2024-05-16 07:12:33] 2024-05-16 05:12:10,682 | INFO     | intersect: -2723005084.6156344
[2024-05-16 07:12:33] 2024-05-16 05:12:10,683 | INFO     | chi2: 0.0011203621616923726
[2024-05-16 07:12:33] 2024-05-16 05:12:10,683 | INFO     | current chi2=0.0011203621616923726 (change=97.97316013553291 %)
[2024-05-16 07:12:33] 2024-05-16 05:12:10,683 | INFO     | model: linear, x: [1715825155.0, 1715825216.0, 1715825277.0, 1715825338.0, 1715825399.0, 1715825460.0, 1715825521.0, 1715825582.0, 1715825643.0, 1715825704.0, 1715
[2024-05-16 07:12:33] 2024-05-16 05:12:10,683 | INFO     | sum of square deviations: 1900284932.0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,684 | INFO     | sum of deviations: 3660405040.000001
[2024-05-16 07:12:33] 2024-05-16 05:12:10,684 | INFO     | mean x: 1715830706.0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,685 | INFO     | mean y: 2350703.743169399
[2024-05-16 07:12:33] 2024-05-16 05:12:10,685 | INFO     | -- intersect: -3302751209.2730837
[2024-05-16 07:12:33] 2024-05-16 05:12:10,685 | INFO     | intersect: -3302751209.2730837
[2024-05-16 07:12:33] 2024-05-16 05:12:10,685 | INFO     | chi2: 0.0005987700497301976
[2024-05-16 07:12:33] 2024-05-16 05:12:10,685 | INFO     | current chi2=0.0005987700497301976 (change=46.555670103520775 %)
[2024-05-16 07:12:33] 2024-05-16 05:12:10,685 | INFO     | model: linear, x: [1715825460.0, 1715825521.0, 1715825582.0, 1715825643.0, 1715825704.0, 1715825765.0, 1715825826.0, 1715825887.0, 1715825948.0, 1715826009.0, 1715
[2024-05-16 07:12:33] 2024-05-16 05:12:10,685 | INFO     | sum of square deviations: 1748737904.5
[2024-05-16 07:12:33] 2024-05-16 05:12:10,687 | INFO     | sum of deviations: 3233045902.500001
[2024-05-16 07:12:33] 2024-05-16 05:12:10,687 | INFO     | mean x: 1715830858.5
[2024-05-16 07:12:33] 2024-05-16 05:12:10,687 | INFO     | mean y: 2351138.0168539328
[2024-05-16 07:12:33] 2024-05-16 05:12:10,687 | INFO     | -- intersect: -3169856608.0276217
[2024-05-16 07:12:33] 2024-05-16 05:12:10,687 | INFO     | intersect: -3169856608.0276217
[2024-05-16 07:12:33] 2024-05-16 05:12:10,687 | INFO     | chi2: 0.00041545922306594226
[2024-05-16 07:12:33] 2024-05-16 05:12:10,687 | INFO     | current chi2=0.00041545922306594226 (change=30.614561758199855 %)
[2024-05-16 07:12:33] 2024-05-16 05:12:10,687 | INFO     | model: linear, x: [1715825765.0, 1715825826.0, 1715825887.0, 1715825948.0, 1715826009.0, 1715826070.0, 1715826131.0, 1715826192.0, 1715826253.0, 1715826314.0, 1715
[2024-05-16 07:12:33] 2024-05-16 05:12:10,688 | INFO     | sum of square deviations: 1605470102.0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,689 | INFO     | sum of deviations: 2646894920.0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,689 | INFO     | mean x: 1715831011.0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,689 | INFO     | mean y: 2351761.838150289
[2024-05-16 07:12:33] 2024-05-16 05:12:10,689 | INFO     | -- intersect: -2826492189.186958
[2024-05-16 07:12:33] 2024-05-16 05:12:10,689 | INFO     | intersect: -2826492189.186958
[2024-05-16 07:12:33] 2024-05-16 05:12:10,689 | INFO     | chi2: 0.0002725767518184504
[2024-05-16 07:12:33] 2024-05-16 05:12:10,690 | INFO     | current chi2=0.0002725767518184504 (change=34.39145488047412 %)
[2024-05-16 07:12:33] 2024-05-16 05:12:10,690 | INFO     | model: linear, x: [1715826070.0, 1715826131.0, 1715826192.0, 1715826253.0, 1715826314.0, 1715826375.0, 1715826436.0, 1715826497.0, 1715826558.0, 1715826619.0, 1715
[2024-05-16 07:12:33] 2024-05-16 05:12:10,690 | INFO     | sum of square deviations: 1470248962.0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,691 | INFO     | sum of deviations: 2287478375.5
[2024-05-16 07:12:33] 2024-05-16 05:12:10,691 | INFO     | mean x: 1715831163.5
[2024-05-16 07:12:33] 2024-05-16 05:12:10,691 | INFO     | mean y: 2352167.2678571427
[2024-05-16 07:12:33] 2024-05-16 05:12:10,691 | INFO     | -- intersect: -2667213861.315576
[2024-05-16 07:12:33] 2024-05-16 05:12:10,691 | INFO     | intersect: -2667213861.315576
[2024-05-16 07:12:33] 2024-05-16 05:12:10,691 | INFO     | chi2: 0.000245263475349141
[2024-05-16 07:12:33] 2024-05-16 05:12:10,692 | INFO     | current chi2=0.000245263475349141 (change=10.020398396816105 %)
[2024-05-16 07:12:33] 2024-05-16 05:12:10,692 | INFO     | left removable region: 70
[2024-05-16 07:12:33] 2024-05-16 05:12:10,692 | INFO     | model: linear, x: [1715828205.0, 1715828266.0, 1715828327.0, 1715828388.0, 1715828449.0, 1715828510.0, 1715828571.0, 1715828632.0, 1715828693.0, 1715828754.0, 1715
[2024-05-16 07:12:33] 2024-05-16 05:12:10,692 | INFO     | sum of square deviations: 635130048.0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,693 | INFO     | sum of deviations: 629342063.0000001
[2024-05-16 07:12:33] 2024-05-16 05:12:10,693 | INFO     | mean x: 1715832048.0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,693 | INFO     | mean y: 2354404.724409449
[2024-05-16 07:12:33] 2024-05-16 05:12:10,693 | INFO     | -- intersect: -1697841144.5969088
[2024-05-16 07:12:33] 2024-05-16 05:12:10,693 | INFO     | intersect: -1697841144.5969088
[2024-05-16 07:12:33] 2024-05-16 05:12:10,693 | INFO     | chi2: 0.00013031705364968584
[2024-05-16 07:12:33] 2024-05-16 05:12:10,693 | INFO     | -- intersect: -1697841144.5969088
[2024-05-16 07:12:33] 2024-05-16 05:12:10,693 | INFO     | current memory leak: 0.99 B/s (using 127 data points, chi2=0.00)
[2024-05-16 07:12:33] 2024-05-16 05:12:10,694 | INFO     | ..............................
[2024-05-16 07:12:33] 2024-05-16 05:12:10,694 | INFO     | . Timing measurements:
[2024-05-16 07:12:33] 2024-05-16 05:12:10,694 | INFO     | . get job = 0 s
[2024-05-16 07:12:33] 2024-05-16 05:12:10,694 | INFO     | . initial setup = 1 s
[2024-05-16 07:12:33] 2024-05-16 05:12:10,694 | INFO     | . payload setup = 6 s
[2024-05-16 07:12:33] 2024-05-16 05:12:10,694 | INFO     | . stage-in = 0 s
[2024-05-16 07:12:33] 2024-05-16 05:12:10,694 | INFO     | . payload execution = 12385 s
[2024-05-16 07:12:33] 2024-05-16 05:12:10,694 | INFO     | . stage-out = 1 s
[2024-05-16 07:12:33] 2024-05-16 05:12:10,694 | INFO     | . log creation = 0 s
[2024-05-16 07:12:33] 2024-05-16 05:12:10,695 | INFO     | ..............................
[2024-05-16 07:12:33] 2024-05-16 05:12:10,788 | INFO     | 
[2024-05-16 07:12:33] 2024-05-16 05:12:10,788 | INFO     | job summary report
[2024-05-16 07:12:33] 2024-05-16 05:12:10,788 | INFO     | --------------------------------------------------
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | PanDA job id: 6205810794
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | task id: 38776125
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | errors: (none)
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | pilot state: finished 
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | transexitcode: 0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | exeerrorcode: 0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | exeerrordiag: 
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | exitcode: 0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | exitmsg: OK
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | cpuconsumptiontime: 46558 s
[2024-05-16 07:12:33] 2024-05-16 05:12:10,789 | INFO     | nevents: 400
[2024-05-16 07:12:33] 2024-05-16 05:12:10,790 | INFO     | neventsw: 0
[2024-05-16 07:12:33] 2024-05-16 05:12:10,790 | INFO     | pid: 395367
[2024-05-16 07:12:33] 2024-05-16 05:12:10,790 | INFO     | pgrp: 395367
[2024-05-16 07:12:33] 2024-05-16 05:12:10,790 | INFO     | corecount: 4
[2024-05-16 07:12:33] 2024-05-16 05:12:10,790 | INFO     | event service: False
[2024-05-16 07:12:33] 2024-05-16 05:12:10,790 | INFO     | sizes: {0: 2392206, 6: 2392412, 11: 2392440, 12395: 2422136, 12398: 2431118, 12400: 2431174, 12408: 2431472}
[2024-05-16 07:12:33] 2024-05-16 05:12:10,790 | INFO     | --------------------------------------------------
[2024-05-16 07:12:33] 2024-05-16 05:12:10,790 | INFO     | 
[2024-05-16 07:12:33] 2024-05-16 05:12:10,790 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-05-16 07:12:33] 2024-05-16 05:12:10,817 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,818 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,818 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,818 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,818 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,818 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,819 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,819 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,819 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,819 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,819 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,819 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 07:12:33] 2024-05-16 05:12:10,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,819 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 07:12:33] 2024-05-16 05:12:10,820 | INFO     | job 6205810794 has completed (purged errors)
[2024-05-16 07:12:33] 2024-05-16 05:12:10,820 | INFO     | overall cleanup function is called
[2024-05-16 07:12:33] 2024-05-16 05:12:11,828 | INFO     | --- collectZombieJob: --- 10, [395367]
[2024-05-16 07:12:33] 2024-05-16 05:12:11,828 | INFO     | zombie collector waiting for pid 395367
[2024-05-16 07:12:33] 2024-05-16 05:12:11,828 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 07:12:33] 2024-05-16 05:12:12,833 | INFO     | collected zombie processes
[2024-05-16 07:12:33] 2024-05-16 05:12:12,833 | INFO     | will now attempt to kill all subprocesses of pid=395367
[2024-05-16 07:12:33] 2024-05-16 05:12:13,051 | INFO     | process IDs to be killed: [395367] (in reverse order)
[2024-05-16 07:12:33] 2024-05-16 05:12:13,274 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 07:12:33] 2024-05-16 05:12:13,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 07:12:33] 2024-05-16 05:12:13,292 | INFO     | did not find any defunct processes belonging to 395367
[2024-05-16 07:12:33] 2024-05-16 05:12:13,306 | INFO     | did not find any defunct processes belonging to 395367
[2024-05-16 07:12:33] 2024-05-16 05:12:13,306 | INFO     | ready for new job
[2024-05-16 07:12:33] 2024-05-16 05:12:13,306 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 07:12:33] 2024-05-16 05:12:13,307 | INFO     | *************************************
[2024-05-16 07:12:33] 2024-05-16 05:12:13,307 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 07:12:33] 2024-05-16 05:12:13,307 | INFO     | *************************************
[2024-05-16 07:12:33] 2024-05-16 05:12:13,307 | INFO     | 
[2024-05-16 07:12:33] 2024-05-16 05:12:13,312 | INFO     | architecture information:
[2024-05-16 07:12:33] 2024-05-16 05:12:13,312 | INFO     | executing command: cat /etc/os-release
[2024-05-16 07:12:33] 2024-05-16 05:12:13,338 | INFO     | cat /etc/os-release:
[2024-05-16 07:12:33] NAME="CentOS Linux"
[2024-05-16 07:12:33] VERSION="7 (Core)"
[2024-05-16 07:12:33] ID="centos"
[2024-05-16 07:12:33] ID_LIKE="rhel fedora"
[2024-05-16 07:12:33] VERSION_ID="7"
[2024-05-16 07:12:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 07:12:33] ANSI_COLOR="0;31"
[2024-05-16 07:12:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 07:12:33] HOME_URL="https://www.centos.org/"
[2024-05-16 07:12:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 07:12:33] 
[2024-05-16 07:12:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 07:12:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 07:12:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 07:12:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 07:12:33] 
[2024-05-16 07:12:33] 2024-05-16 05:12:13,338 | INFO     | *************************************
[2024-05-16 07:12:33] 2024-05-16 05:12:13,841 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-05-16 07:12:33] 2024-05-16 05:12:13,863 | INFO     | sufficient remaining disk space (3008921337856 B)
[2024-05-16 07:12:33] 2024-05-16 05:12:13,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 07:12:33] 2024-05-16 05:12:13,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 07:12:33] 2024-05-16 05:12:13,864 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 07:12:33] 2024-05-16 05:12:13,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 07:12:33] 2024-05-16 05:12:13,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 07:12:33] 2024-05-16 05:12:13,865 | INFO     | aborting loop
[2024-05-16 07:12:33] 2024-05-16 05:12:14,555 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 07:12:33] 2024-05-16 05:12:14,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 07:12:33] 2024-05-16 05:12:14,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 07:12:33] 2024-05-16 05:12:14,737 | INFO     | all data control threads have been joined
[2024-05-16 07:12:33] 2024-05-16 05:12:14,783 | INFO     | all payload control threads have been joined
[2024-05-16 07:12:33] 2024-05-16 05:12:14,869 | INFO     | [job] retrieve thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:14,870 | INFO     | [job] job monitor thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:14,904 | INFO     | all job control threads have been joined
[2024-05-16 07:12:33] 2024-05-16 05:12:15,090 | INFO     | [job] validate thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:15,320 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:15,367 | INFO     | [payload] failed_post thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:15,409 | INFO     | [payload] validate_post thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:15,632 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:15,742 | INFO     | [data] control thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:15,789 | INFO     | [payload] control thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:15,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 07:12:33] 2024-05-16 05:12:15,833 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:15,869 | INFO     | [data] copytool_out thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:15,909 | INFO     | [job] control thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:16,078 | INFO     | [data] copytool_in thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:16,803 | INFO     | [job] queue monitor thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:17,869 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:24,403 | INFO     | job.realtimelogging is not enabled
[2024-05-16 07:12:33] 2024-05-16 05:12:25,409 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 07:12:33] 2024-05-16 05:12:27,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47644005151808)>', '<ExcThread(monitor, started 47644189009664)>']
[2024-05-16 07:12:33] 2024-05-16 05:12:27,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 07:12:33] 2024-05-16 05:12:27,620 | INFO     | [monitor] control thread has ended
[2024-05-16 07:12:33] 2024-05-16 05:12:32,437 | INFO     | all workflow threads have been joined
[2024-05-16 07:12:33] 2024-05-16 05:12:32,437 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 07:12:33] 2024-05-16 05:12:32,437 | INFO     | traces error code: 0
[2024-05-16 07:12:33] 2024-05-16 05:12:32,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 07:12:33] 2024-05-16 05:12:32,530 [wrapper] ==== pilot stdout END ====
[2024-05-16 07:12:33] 2024-05-16 05:12:32,533 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 07:12:33] 2024-05-16 05:12:32,537 [wrapper] pilotpid: 387751
[2024-05-16 07:12:33] 2024-05-16 05:12:32,539 [wrapper] Pilot exit status: 0
[2024-05-16 07:12:33] 2024-05-16 05:12:32,566 [wrapper] pandaids: 6205810794
[2024-05-16 07:12:33] 2024-05-16 05:12:32,669 [wrapper] cleanup: SIGTERM to supervisor_pilot 1335991 387752
[2024-05-16 07:12:33] 2024-05-16 05:12:32,672 [wrapper] Test setup, not cleaning
[2024-05-16 07:12:33] 2024-05-16 05:12:32,673 [wrapper] ==== wrapper stdout END ====
[2024-05-16 07:12:33] 2024-05-16 05:12:32,675 [wrapper] ==== wrapper stderr END ====
[2024-05-16 07:12:33] 2024-05-16 05:12:32,679 [wrapper] apfmon messages muted
[2024-05-16 07:12:33]  *** Error codes and diagnostics ***
[2024-05-16 07:12:33]     "exeErrorCode": 0,
[2024-05-16 07:12:33]     "exeErrorDiag": "",
[2024-05-16 07:12:33]     "pilotErrorCode": 0,
[2024-05-16 07:12:33]     "pilotErrorDiag": "",
[2024-05-16 07:12:33]  *** Listing of results directory ***
[2024-05-16 07:12:33] total 823600
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc    467845 May 13 08:49 pilot3.tar.gz
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc      5633 May 13 08:51 queuedata.json
[2024-05-16 07:12:33] -rwx------ 1 boinc boinc     32251 May 13 08:52 runpilot2-wrapper.sh
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc       100 May 16 03:44 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 07:12:33] -rwxr-xr-x 1 boinc boinc      7986 May 16 03:44 run_atlas
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc       105 May 16 03:44 job.xml
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc      6644 May 16 03:44 init_data.xml
[2024-05-16 07:12:33] -rw-r--r-- 2 boinc boinc 595885244 May 16 03:44 EVNT.38776119._000134.pool.root.1
[2024-05-16 07:12:33] drwxrwx--x 2 boinc boinc      4096 May 16 03:44 shared
[2024-05-16 07:12:33] -rw-r--r-- 2 boinc boinc    480001 May 16 03:44 input.tar.gz
[2024-05-16 07:12:33] -rw-r--r-- 2 boinc boinc     17537 May 16 03:44 start_atlas.sh
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc         0 May 16 03:44 boinc_lockfile
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc      2634 May 16 03:44 pandaJob.out
[2024-05-16 07:12:33] -rw------- 1 boinc boinc       424 May 16 03:44 setup.sh.local
[2024-05-16 07:12:33] -rw------- 1 boinc boinc   1011355 May 16 03:45 agis_schedconf.cvmfs.json
[2024-05-16 07:12:33] -rw------- 1 boinc boinc   1324701 May 16 03:45 cric_ddmendpoints.json
[2024-05-16 07:12:33] drwx------ 4 boinc boinc      4096 May 16 03:45 pilot3
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc       531 May 16 07:11 boinc_task_state.xml
[2024-05-16 07:12:33] -rw------- 1 boinc boinc 240659105 May 16 07:11 HITS.38776125._002910.pool.root.1
[2024-05-16 07:12:33] -rw------- 1 boinc boinc        95 May 16 07:11 pilot_heartbeat.json
[2024-05-16 07:12:33] -rw------- 1 boinc boinc      1041 May 16 07:11 memory_monitor_summary.json
[2024-05-16 07:12:33] -rw------- 1 boinc boinc         0 May 16 07:12 agis_ddmendpoints.agis.ALL.json
[2024-05-16 07:12:33] -rw------- 1 boinc boinc    333184 May 16 07:12 log.38776125._002910.job.log.tgz.1
[2024-05-16 07:12:33] -rw------- 1 boinc boinc      7715 May 16 07:12 heartbeat.json
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc        28 May 16 07:12 wrapper_checkpoint.txt
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc      8192 May 16 07:12 boinc_mmap_file
[2024-05-16 07:12:33] -rw------- 1 boinc boinc      4294 May 16 07:12 pilotlog.txt
[2024-05-16 07:12:33] -rw------- 1 boinc boinc   1312333 May 16 07:12 log.38776125._002910.job.log.1
[2024-05-16 07:12:33] -rw------- 1 boinc boinc       357 May 16 07:12 output.list
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc       620 May 16 07:12 runtime_log
[2024-05-16 07:12:33] -rw------- 1 boinc boinc   1669120 May 16 07:12 result.tar.gz
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc     11410 May 16 07:12 runtime_log.err
[2024-05-16 07:12:33] -rw------- 1 boinc boinc       658 May 16 07:12 dLMLDmdieQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmlRGKDmXDxlmm.diag
[2024-05-16 07:12:33] -rw-r--r-- 1 boinc boinc     21346 May 16 07:12 stderr.txt
[2024-05-16 07:12:33] HITS file was successfully produced:
[2024-05-16 07:12:33] -rw------- 1 boinc boinc 240659105 May 16 07:11 shared/HITS.pool.root.1
[2024-05-16 07:12:33]  *** Contents of shared directory: ***
[2024-05-16 07:12:33] total 819072
[2024-05-16 07:12:33] -rw-r--r-- 2 boinc boinc 595885244 May 16 03:44 ATLAS.root_0
[2024-05-16 07:12:33] -rw-r--r-- 2 boinc boinc    480001 May 16 03:44 input.tar.gz
[2024-05-16 07:12:33] -rw-r--r-- 2 boinc boinc     17537 May 16 03:44 start_atlas.sh
[2024-05-16 07:12:33] -rw------- 1 boinc boinc 240659105 May 16 07:11 HITS.pool.root.1
[2024-05-16 07:12:33] -rw------- 1 boinc boinc   1669120 May 16 07:12 result.tar.gz
07:12:35 (382485): run_atlas exited; CPU time 46252.396713
07:12:35 (382485): called boinc_finish(0)

</stderr_txt>
]]>

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