Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:02:25 (482590): wrapper (7.7.26015): starting
05:02:25 (482590): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 05:02:25] Arguments: --nthreads 4
[2024-05-17 05:02:25] Threads: 4
[2024-05-17 05:02:25] Checking for CVMFS
[2024-05-17 05:02:25] No cvmfs_config command found, will try listing directly
[2024-05-17 05:02:25] CVMFS is ok
[2024-05-17 05:02:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 05:02:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 05:02:25] Further information can be found at the LHC@home message board.
[2024-05-17 05:02:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 05:02:25] Checking for apptainer binary...
[2024-05-17 05:02:25] which: no apptainer in ((null))
[2024-05-17 05:02:25] apptainer is not installed, using version from CVMFS
[2024-05-17 05:02:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 05:02:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2024-05-17 05:02:25] apptainer works
[2024-05-17 05:02:25] Set ATHENA_PROC_NUMBER=4
[2024-05-17 05:02:25] Set ATHENA_CORE_NUMBER=4
[2024-05-17 05:02:25] Starting ATLAS job with PandaID=6205810317
[2024-05-17 05:02:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 07:58:52]  *** The last 200 lines of the pilot log: ***
[2024-05-17 07:58:52] 2024-05-17 05:58:39,108 | INFO     | intersect: -44581925876.19615
[2024-05-17 07:58:52] 2024-05-17 05:58:39,108 | INFO     | chi2: 1.396795472196842
[2024-05-17 07:58:52] 2024-05-17 05:58:39,108 | INFO     | current chi2=1.396795472196842 (change=62.86694508681797 %)
[2024-05-17 07:58:52] 2024-05-17 05:58:39,108 | INFO     | model: linear, x: [1715915587.0, 1715915648.0, 1715915709.0, 1715915770.0, 1715915831.0, 1715915892.0, 1715915953.0, 1715916014.0, 1715916075.0, 1715916136.0, 1715
[2024-05-17 07:58:52] 2024-05-17 05:58:39,109 | INFO     | sum of square deviations: 1342841922.0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,109 | INFO     | sum of deviations: 7625515876.999999
[2024-05-17 07:58:52] 2024-05-17 05:58:39,109 | INFO     | mean x: 1715920528.0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,109 | INFO     | mean y: 2354515.754601227
[2024-05-17 07:58:52] 2024-05-17 05:58:39,109 | INFO     | -- intersect: -9741740463.38191
[2024-05-17 07:58:52] 2024-05-17 05:58:39,109 | INFO     | intersect: -9741740463.38191
[2024-05-17 07:58:52] 2024-05-17 05:58:39,110 | INFO     | chi2: 0.06704693278017286
[2024-05-17 07:58:52] 2024-05-17 05:58:39,110 | INFO     | current chi2=0.06704693278017286 (change=95.19994629745447 %)
[2024-05-17 07:58:52] 2024-05-17 05:58:39,110 | INFO     | model: linear, x: [1715915892.0, 1715915953.0, 1715916014.0, 1715916075.0, 1715916136.0, 1715916197.0, 1715916258.0, 1715916319.0, 1715916380.0, 1715916441.0, 1715
[2024-05-17 07:58:52] 2024-05-17 05:58:39,110 | INFO     | sum of square deviations: 1223016419.5
[2024-05-17 07:58:52] 2024-05-17 05:58:39,111 | INFO     | sum of deviations: 4068531456.9999995
[2024-05-17 07:58:52] 2024-05-17 05:58:39,111 | INFO     | mean x: 1715920680.5
[2024-05-17 07:58:52] 2024-05-17 05:58:39,111 | INFO     | mean y: 2358942.075949367
[2024-05-17 07:58:52] 2024-05-17 05:58:39,111 | INFO     | -- intersect: -5705885980.085617
[2024-05-17 07:58:52] 2024-05-17 05:58:39,111 | INFO     | intersect: -5705885980.085617
[2024-05-17 07:58:52] 2024-05-17 05:58:39,111 | INFO     | chi2: 0.0021458423120995166
[2024-05-17 07:58:52] 2024-05-17 05:58:39,111 | INFO     | current chi2=0.0021458423120995166 (change=96.79949220177588 %)
[2024-05-17 07:58:52] 2024-05-17 05:58:39,111 | INFO     | model: linear, x: [1715916197.0, 1715916258.0, 1715916319.0, 1715916380.0, 1715916441.0, 1715916502.0, 1715916563.0, 1715916624.0, 1715916685.0, 1715916746.0, 1715
[2024-05-17 07:58:52] 2024-05-17 05:58:39,112 | INFO     | sum of square deviations: 1110539892.0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,112 | INFO     | sum of deviations: 2891398780.0000005
[2024-05-17 07:58:52] 2024-05-17 05:58:39,112 | INFO     | mean x: 1715920833.0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,112 | INFO     | mean y: 2360532.8169934643
[2024-05-17 07:58:52] 2024-05-17 05:58:39,112 | INFO     | -- intersect: -4465206493.683649
[2024-05-17 07:58:52] 2024-05-17 05:58:39,112 | INFO     | intersect: -4465206493.683649
[2024-05-17 07:58:52] 2024-05-17 05:58:39,112 | INFO     | chi2: 0.0009187969279876364
[2024-05-17 07:58:52] 2024-05-17 05:58:39,113 | INFO     | current chi2=0.0009187969279876364 (change=57.18245824462866 %)
[2024-05-17 07:58:52] 2024-05-17 05:58:39,113 | INFO     | model: linear, x: [1715916502.0, 1715916563.0, 1715916624.0, 1715916685.0, 1715916746.0, 1715916807.0, 1715916868.0, 1715916929.0, 1715916990.0, 1715917051.0, 1715
[2024-05-17 07:58:52] 2024-05-17 05:58:39,113 | INFO     | sum of square deviations: 1005179777.0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,113 | INFO     | sum of deviations: 2159502083.5000005
[2024-05-17 07:58:52] 2024-05-17 05:58:39,113 | INFO     | mean x: 1715920985.5
[2024-05-17 07:58:52] 2024-05-17 05:58:39,113 | INFO     | mean y: 2361589.3445945946
[2024-05-17 07:58:52] 2024-05-17 05:58:39,113 | INFO     | -- intersect: -3684078416.8082795
[2024-05-17 07:58:52] 2024-05-17 05:58:39,114 | INFO     | intersect: -3684078416.8082795
[2024-05-17 07:58:52] 2024-05-17 05:58:39,114 | INFO     | chi2: 0.0004994617442145629
[2024-05-17 07:58:52] 2024-05-17 05:58:39,114 | INFO     | current chi2=0.0004994617442145629 (change=45.63959358152275 %)
[2024-05-17 07:58:52] 2024-05-17 05:58:39,114 | INFO     | model: linear, x: [1715916807.0, 1715916868.0, 1715916929.0, 1715916990.0, 1715917051.0, 1715917112.0, 1715917173.0, 1715917234.0, 1715917295.0, 1715917356.0, 1715
[2024-05-17 07:58:52] 2024-05-17 05:58:39,114 | INFO     | sum of square deviations: 906703512.0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,114 | INFO     | sum of deviations: 1712017581.9999998
[2024-05-17 07:58:52] 2024-05-17 05:58:39,115 | INFO     | mean x: 1715921138.0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,115 | INFO     | mean y: 2362281.272727273
[2024-05-17 07:58:52] 2024-05-17 05:58:39,115 | INFO     | -- intersect: -3237602181.974491
[2024-05-17 07:58:52] 2024-05-17 05:58:39,115 | INFO     | intersect: -3237602181.974491
[2024-05-17 07:58:52] 2024-05-17 05:58:39,115 | INFO     | chi2: 0.00038314787016254897
[2024-05-17 07:58:52] 2024-05-17 05:58:39,115 | INFO     | current chi2=0.00038314787016254897 (change=23.287844444407906 %)
[2024-05-17 07:58:52] 2024-05-17 05:58:39,115 | INFO     | left removable region: 60
[2024-05-17 07:58:52] 2024-05-17 05:58:39,115 | INFO     | model: linear, x: [1715918637.0, 1715918698.0, 1715918759.0, 1715918820.0, 1715918881.0, 1715918942.0, 1715919003.0, 1715919064.0, 1715919125.0, 1715919186.0, 1715
[2024-05-17 07:58:52] 2024-05-17 05:58:39,115 | INFO     | sum of square deviations: 379832238.0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,116 | INFO     | sum of deviations: 412728440.0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,116 | INFO     | mean x: 1715921870.0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,116 | INFO     | mean y: 2365079.3925233646
[2024-05-17 07:58:52] 2024-05-17 05:58:39,116 | INFO     | -- intersect: -1862167958.3929183
[2024-05-17 07:58:52] 2024-05-17 05:58:39,116 | INFO     | intersect: -1862167958.3929183
[2024-05-17 07:58:52] 2024-05-17 05:58:39,116 | INFO     | chi2: 3.9360728241906275e-05
[2024-05-17 07:58:52] 2024-05-17 05:58:39,116 | INFO     | -- intersect: -1862167958.3929183
[2024-05-17 07:58:52] 2024-05-17 05:58:39,116 | INFO     | current memory leak: 1.09 B/s (using 107 data points, chi2=0.00)
[2024-05-17 07:58:52] 2024-05-17 05:58:39,117 | INFO     | ..............................
[2024-05-17 07:58:52] 2024-05-17 05:58:39,117 | INFO     | . Timing measurements:
[2024-05-17 07:58:52] 2024-05-17 05:58:39,117 | INFO     | . get job = 0 s
[2024-05-17 07:58:52] 2024-05-17 05:58:39,117 | INFO     | . initial setup = 1 s
[2024-05-17 07:58:52] 2024-05-17 05:58:39,117 | INFO     | . payload setup = 5 s
[2024-05-17 07:58:52] 2024-05-17 05:58:39,117 | INFO     | . stage-in = 0 s
[2024-05-17 07:58:52] 2024-05-17 05:58:39,117 | INFO     | . payload execution = 10531 s
[2024-05-17 07:58:52] 2024-05-17 05:58:39,117 | INFO     | . stage-out = 0 s
[2024-05-17 07:58:52] 2024-05-17 05:58:39,117 | INFO     | . log creation = 0 s
[2024-05-17 07:58:52] 2024-05-17 05:58:39,117 | INFO     | ..............................
[2024-05-17 07:58:52] 2024-05-17 05:58:39,178 | INFO     | 
[2024-05-17 07:58:52] 2024-05-17 05:58:39,178 | INFO     | job summary report
[2024-05-17 07:58:52] 2024-05-17 05:58:39,178 | INFO     | --------------------------------------------------
[2024-05-17 07:58:52] 2024-05-17 05:58:39,178 | INFO     | PanDA job id: 6205810317
[2024-05-17 07:58:52] 2024-05-17 05:58:39,178 | INFO     | task id: 38776125
[2024-05-17 07:58:52] 2024-05-17 05:58:39,178 | INFO     | errors: (none)
[2024-05-17 07:58:52] 2024-05-17 05:58:39,179 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 07:58:52] 2024-05-17 05:58:39,179 | INFO     | pilot state: finished 
[2024-05-17 07:58:52] 2024-05-17 05:58:39,179 | INFO     | transexitcode: 0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,179 | INFO     | exeerrorcode: 0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,179 | INFO     | exeerrordiag: 
[2024-05-17 07:58:52] 2024-05-17 05:58:39,179 | INFO     | exitcode: 0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,179 | INFO     | exitmsg: OK
[2024-05-17 07:58:52] 2024-05-17 05:58:39,179 | INFO     | cpuconsumptiontime: 39181 s
[2024-05-17 07:58:52] 2024-05-17 05:58:39,179 | INFO     | nevents: 400
[2024-05-17 07:58:52] 2024-05-17 05:58:39,180 | INFO     | neventsw: 0
[2024-05-17 07:58:52] 2024-05-17 05:58:39,180 | INFO     | pid: 494184
[2024-05-17 07:58:52] 2024-05-17 05:58:39,180 | INFO     | pgrp: 494184
[2024-05-17 07:58:52] 2024-05-17 05:58:39,180 | INFO     | corecount: 4
[2024-05-17 07:58:52] 2024-05-17 05:58:39,180 | INFO     | event service: False
[2024-05-17 07:58:52] 2024-05-17 05:58:39,180 | INFO     | sizes: {0: 2392204, 4: 2392410, 11: 2392438, 10540: 2421406, 10541: 2430388, 10543: 2430444, 10550: 2430742}
[2024-05-17 07:58:52] 2024-05-17 05:58:39,180 | INFO     | --------------------------------------------------
[2024-05-17 07:58:52] 2024-05-17 05:58:39,180 | INFO     | 
[2024-05-17 07:58:52] 2024-05-17 05:58:39,181 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-05-17 07:58:52] 2024-05-17 05:58:39,203 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,204 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,204 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,204 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,204 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,204 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,205 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,205 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,205 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,205 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,205 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,205 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,205 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,206 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,206 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,206 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 07:58:52] 2024-05-17 05:58:39,206 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,206 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 07:58:52] 2024-05-17 05:58:39,207 | INFO     | job 6205810317 has completed (purged errors)
[2024-05-17 07:58:52] 2024-05-17 05:58:39,207 | INFO     | overall cleanup function is called
[2024-05-17 07:58:52] 2024-05-17 05:58:40,215 | INFO     | --- collectZombieJob: --- 10, [494184]
[2024-05-17 07:58:52] 2024-05-17 05:58:40,215 | INFO     | zombie collector waiting for pid 494184
[2024-05-17 07:58:52] 2024-05-17 05:58:40,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 07:58:52] 2024-05-17 05:58:41,220 | INFO     | collected zombie processes
[2024-05-17 07:58:52] 2024-05-17 05:58:41,221 | INFO     | will now attempt to kill all subprocesses of pid=494184
[2024-05-17 07:58:52] 2024-05-17 05:58:41,344 | INFO     | process IDs to be killed: [494184] (in reverse order)
[2024-05-17 07:58:52] 2024-05-17 05:58:41,425 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 07:58:52] 2024-05-17 05:58:41,426 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 07:58:52] 2024-05-17 05:58:41,431 | INFO     | did not find any defunct processes belonging to 494184
[2024-05-17 07:58:52] 2024-05-17 05:58:41,435 | INFO     | did not find any defunct processes belonging to 494184
[2024-05-17 07:58:52] 2024-05-17 05:58:41,435 | INFO     | ready for new job
[2024-05-17 07:58:52] 2024-05-17 05:58:41,435 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 07:58:52] 2024-05-17 05:58:41,437 | INFO     | *************************************
[2024-05-17 07:58:52] 2024-05-17 05:58:41,437 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 07:58:52] 2024-05-17 05:58:41,437 | INFO     | *************************************
[2024-05-17 07:58:52] 2024-05-17 05:58:41,437 | INFO     | 
[2024-05-17 07:58:52] 2024-05-17 05:58:41,439 | INFO     | architecture information:
[2024-05-17 07:58:52] 2024-05-17 05:58:41,439 | INFO     | executing command: cat /etc/os-release
[2024-05-17 07:58:52] 2024-05-17 05:58:41,454 | INFO     | cat /etc/os-release:
[2024-05-17 07:58:52] NAME="CentOS Linux"
[2024-05-17 07:58:52] VERSION="7 (Core)"
[2024-05-17 07:58:52] ID="centos"
[2024-05-17 07:58:52] ID_LIKE="rhel fedora"
[2024-05-17 07:58:52] VERSION_ID="7"
[2024-05-17 07:58:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 07:58:52] ANSI_COLOR="0;31"
[2024-05-17 07:58:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 07:58:52] HOME_URL="https://www.centos.org/"
[2024-05-17 07:58:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 07:58:52] 
[2024-05-17 07:58:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 07:58:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 07:58:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 07:58:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 07:58:52] 
[2024-05-17 07:58:52] 2024-05-17 05:58:41,455 | INFO     | *************************************
[2024-05-17 07:58:52] 2024-05-17 05:58:41,957 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-05-17 07:58:52] 2024-05-17 05:58:41,973 | INFO     | sufficient remaining disk space (1604697718784 B)
[2024-05-17 07:58:52] 2024-05-17 05:58:41,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 07:58:52] 2024-05-17 05:58:41,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 07:58:52] 2024-05-17 05:58:41,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 07:58:52] 2024-05-17 05:58:41,975 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 07:58:52] 2024-05-17 05:58:41,975 | INFO     | aborting loop
[2024-05-17 07:58:52] 2024-05-17 05:58:41,975 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 07:58:52] 2024-05-17 05:58:41,975 | INFO     | all job control threads have been joined
[2024-05-17 07:58:52] 2024-05-17 05:58:41,976 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 07:58:52] 2024-05-17 05:58:41,976 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 07:58:52] 2024-05-17 05:58:42,161 | INFO     | all payload control threads have been joined
[2024-05-17 07:58:52] 2024-05-17 05:58:42,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 07:58:52] 2024-05-17 05:58:42,568 | INFO     | all data control threads have been joined
[2024-05-17 07:58:52] 2024-05-17 05:58:42,978 | INFO     | [job] retrieve thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:42,979 | INFO     | [job] job monitor thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:42,979 | INFO     | [job] control thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:43,136 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:43,156 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 07:58:52] 2024-05-17 05:58:43,167 | INFO     | [payload] control thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:43,183 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:43,187 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:43,240 | INFO     | [payload] failed_post thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:43,574 | INFO     | [data] control thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:43,714 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:43,781 | INFO     | [data] copytool_in thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:44,150 | INFO     | [payload] validate_post thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:44,185 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 07:58:52] 2024-05-17 05:58:44,319 | INFO     | [job] validate thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:45,162 | INFO     | [data] copytool_out thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:45,186 | INFO     | [job] queue monitor thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:46,386 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 07:58:52] 2024-05-17 05:58:46,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47498766648384)>', '<ExcThread(monitor, started 47498944202496)>']
[2024-05-17 07:58:52] 2024-05-17 05:58:47,000 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 07:58:52] 2024-05-17 05:58:47,000 | INFO     | [monitor] control thread has ended
[2024-05-17 07:58:52] 2024-05-17 05:58:51,860 | INFO     | all workflow threads have been joined
[2024-05-17 07:58:52] 2024-05-17 05:58:51,860 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 07:58:52] 2024-05-17 05:58:51,860 | INFO     | traces error code: 0
[2024-05-17 07:58:52] 2024-05-17 05:58:51,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 07:58:52] 2024-05-17 05:58:51,954 [wrapper] ==== pilot stdout END ====
[2024-05-17 07:58:52] 2024-05-17 05:58:51,957 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 07:58:52] 2024-05-17 05:58:51,960 [wrapper] pilotpid: 487050
[2024-05-17 07:58:52] 2024-05-17 05:58:51,963 [wrapper] Pilot exit status: 0
[2024-05-17 07:58:52] 2024-05-17 05:58:51,970 [wrapper] pandaids: 6205810317
[2024-05-17 07:58:52] 2024-05-17 05:58:52,017 [wrapper] cleanup: SIGTERM to supervisor_pilot  674262 487051
[2024-05-17 07:58:52] 2024-05-17 05:58:52,020 [wrapper] Test setup, not cleaning
[2024-05-17 07:58:52] 2024-05-17 05:58:52,023 [wrapper] ==== wrapper stdout END ====
[2024-05-17 07:58:52] 2024-05-17 05:58:52,025 [wrapper] ==== wrapper stderr END ====
[2024-05-17 07:58:52] 2024-05-17 05:58:52,030 [wrapper] apfmon messages muted
[2024-05-17 07:58:52]  *** Error codes and diagnostics ***
[2024-05-17 07:58:52]     "exeErrorCode": 0,
[2024-05-17 07:58:52]     "exeErrorDiag": "",
[2024-05-17 07:58:52]     "pilotErrorCode": 0,
[2024-05-17 07:58:52]     "pilotErrorDiag": "",
[2024-05-17 07:58:52]  *** Listing of results directory ***
[2024-05-17 07:58:52] total 843748
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc    467845 May 13 08:49 pilot3.tar.gz
[2024-05-17 07:58:52] -rwx------ 1 boinc boinc     32251 May 13 08:51 runpilot2-wrapper.sh
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc      5633 May 13 08:51 queuedata.json
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc       100 May 17 04:01 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 07:58:52] -rwxr-xr-x 1 boinc boinc      7986 May 17 04:01 run_atlas
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc       105 May 17 04:01 job.xml
[2024-05-17 07:58:52] -rw-r--r-- 2 boinc boinc 603814045 May 17 05:02 EVNT.38776119._000062.pool.root.1
[2024-05-17 07:58:52] drwxrwx--x 2 boinc boinc      4096 May 17 05:02 shared
[2024-05-17 07:58:52] -rw-r--r-- 2 boinc boinc    480001 May 17 05:02 input.tar.gz
[2024-05-17 07:58:52] -rw-r--r-- 2 boinc boinc     17537 May 17 05:02 start_atlas.sh
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc         0 May 17 05:02 boinc_lockfile
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc      2633 May 17 05:02 pandaJob.out
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc      6456 May 17 05:02 init_data.xml
[2024-05-17 07:58:52] -rw------- 1 boinc boinc       424 May 17 05:02 setup.sh.local
[2024-05-17 07:58:52] -rw------- 1 boinc boinc   1019310 May 17 05:02 agis_schedconf.cvmfs.json
[2024-05-17 07:58:52] -rw------- 1 boinc boinc         0 May 17 05:02 agis_ddmendpoints.agis.ALL.json
[2024-05-17 07:58:52] -rw------- 1 boinc boinc   1324701 May 17 05:02 cric_ddmendpoints.json
[2024-05-17 07:58:52] drwx------ 4 boinc boinc      4096 May 17 05:02 pilot3
[2024-05-17 07:58:52] -rw------- 1 boinc boinc 253757137 May 17 07:57 HITS.38776125._002635.pool.root.1
[2024-05-17 07:58:52] -rw------- 1 boinc boinc        95 May 17 07:58 pilot_heartbeat.json
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc       531 May 17 07:58 boinc_task_state.xml
[2024-05-17 07:58:52] -rw------- 1 boinc boinc      1052 May 17 07:58 memory_monitor_summary.json
[2024-05-17 07:58:52] -rw------- 1 boinc boinc    317012 May 17 07:58 log.38776125._002635.job.log.tgz.1
[2024-05-17 07:58:52] -rw------- 1 boinc boinc      7769 May 17 07:58 heartbeat.json
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc      8192 May 17 07:58 boinc_mmap_file
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc        28 May 17 07:58 wrapper_checkpoint.txt
[2024-05-17 07:58:52] -rw------- 1 boinc boinc      4345 May 17 07:58 pilotlog.txt
[2024-05-17 07:58:52] -rw------- 1 boinc boinc   1129379 May 17 07:58 log.38776125._002635.job.log.1
[2024-05-17 07:58:52] -rw------- 1 boinc boinc       357 May 17 07:58 output.list
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc       620 May 17 07:58 runtime_log
[2024-05-17 07:58:52] -rw------- 1 boinc boinc   1464320 May 17 07:58 result.tar.gz
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc     11410 May 17 07:58 runtime_log.err
[2024-05-17 07:58:52] -rw------- 1 boinc boinc       657 May 17 07:58 A3hNDmtheQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmgaJKDmiGSHtm.diag
[2024-05-17 07:58:52] -rw-r--r-- 1 boinc boinc     21396 May 17 07:58 stderr.txt
[2024-05-17 07:58:52] HITS file was successfully produced:
[2024-05-17 07:58:52] -rw------- 1 boinc boinc 253757137 May 17 07:57 shared/HITS.pool.root.1
[2024-05-17 07:58:52]  *** Contents of shared directory: ***
[2024-05-17 07:58:52] total 839408
[2024-05-17 07:58:52] -rw-r--r-- 2 boinc boinc 603814045 May 17 05:02 ATLAS.root_0
[2024-05-17 07:58:52] -rw-r--r-- 2 boinc boinc    480001 May 17 05:02 input.tar.gz
[2024-05-17 07:58:52] -rw-r--r-- 2 boinc boinc     17537 May 17 05:02 start_atlas.sh
[2024-05-17 07:58:52] -rw------- 1 boinc boinc 253757137 May 17 07:57 HITS.pool.root.1
[2024-05-17 07:58:52] -rw------- 1 boinc boinc   1464320 May 17 07:58 result.tar.gz
07:58:53 (482590): run_atlas exited; CPU time 38885.108794
07:58:53 (482590): called boinc_finish(0)

</stderr_txt>
]]>

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