Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
13:14:19 (190889): wrapper (7.7.26015): starting
13:14:19 (190889): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 13:14:19] Arguments: --nthreads 12
[2024-05-17 13:14:19] Threads: 12
[2024-05-17 13:14:19] Checking for CVMFS
[2024-05-17 13:14:19] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 13:14:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 13:14:19] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 13:14:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 13:14:19] 2.10.1.0 112161 183942 182792 132853 2 71 35629443 45568000 16988 130560 0 1164151633 99.755 738959524 16934 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-17 13:14:19] CVMFS is ok
[2024-05-17 13:14:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 13:14:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 13:14:19] Further information can be found at the LHC@home message board.
[2024-05-17 13:14:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 13:14:19] Checking for apptainer binary...
[2024-05-17 13:14:19] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 13:14:19] Running /usr/bin/apptainer --version
[2024-05-17 13:14:19] apptainer version 1.1.8-1.el7
[2024-05-17 13:14:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 13:14:20] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0037.triumf.lcg
[2024-05-17 13:14:20] apptainer works
[2024-05-17 13:14:20] Set ATHENA_PROC_NUMBER=12
[2024-05-17 13:14:20] Set ATHENA_CORE_NUMBER=12
[2024-05-17 13:14:20] Starting ATLAS job with PandaID=6205810302
[2024-05-17 13:14:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 14:18:14]  *** The last 200 lines of the pilot log: ***
[2024-05-17 14:18:14]  filesize=347503
[2024-05-17 14:18:14]  filetype=log
[2024-05-17 14:18:14]  guid=72660921-8738-4c8e-87be-1340287761c4
[2024-05-17 14:18:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 14:18:14]  is_tar=False
[2024-05-17 14:18:14]  lfn=log.38776125._002620.job.log.tgz.1
[2024-05-17 14:18:14]  mtime=0
[2024-05-17 14:18:14]  protocol_id=None
[2024-05-17 14:18:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 14:18:14]  replicas=None
[2024-05-17 14:18:14]  scope=mc23_13p6TeV
[2024-05-17 14:18:14]  status=None
[2024-05-17 14:18:14]  status_code=0
[2024-05-17 14:18:14]  storage_token=
[2024-05-17 14:18:14]  surl=/home/boinc/slots/0/PanDA_Pilot-6205810302/log.38776125._002620.job.log.tgz.1
[2024-05-17 14:18:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/57/log.38776125._002620.job.log.tgz.1
[2024-05-17 14:18:14]  workdir=None
[2024-05-17 14:18:14] ]
[2024-05-17 14:18:14] 2024-05-17 21:17:43,997 | INFO     | transferring file log.38776125._002620.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6205810302/log.38776125._002620.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 14:18:14] 2024-05-17 21:17:43,998 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6205810302/log.38776125._002620.job.log.tgz.1 /home/boinc/slots/0/log.38776125._002620.job.log.t
[2024-05-17 14:18:14] 2024-05-17 21:17:44,019 | INFO     | adding to output.list: log.38776125._002620.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/57/log.38776125._002620.job.log.tg
[2024-05-17 14:18:14] 2024-05-17 21:17:44,020 | INFO     | summary of transferred files:
[2024-05-17 14:18:14] 2024-05-17 21:17:44,020 | INFO     |  -- lfn=log.38776125._002620.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 14:18:14] 2024-05-17 21:17:44,020 | INFO     | stage-out finished correctly
[2024-05-17 14:18:14] 2024-05-17 21:17:45,735 | INFO     | monitor loop #295: job 0:6205810302 is in state 'finished'
[2024-05-17 14:18:14] 2024-05-17 21:17:45,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 14:18:14] 2024-05-17 21:17:46,301 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 14:18:14] 2024-05-17 21:17:48,211 | INFO     | job 6205810302 has state=finished
[2024-05-17 14:18:14] 2024-05-17 21:17:48,212 | INFO     | preparing for final server update for job 6205810302 in state='finished'
[2024-05-17 14:18:14] 2024-05-17 21:17:48,213 | INFO     | this job has now completed (state=finished)
[2024-05-17 14:18:14] 2024-05-17 21:17:48,213 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 14:18:14] 2024-05-17 21:17:48,213 | INFO     | job 6205810302 has finished - writing final server update
[2024-05-17 14:18:14] 2024-05-17 21:17:48,213 | INFO     | total number of processed events: 400 (read)
[2024-05-17 14:18:14] 2024-05-17 21:17:48,220 | INFO     | executing command: lscpu
[2024-05-17 14:18:14] 2024-05-17 21:17:48,239 | INFO     | monitor loop #296: job 0:6205810302 is in state 'finished'
[2024-05-17 14:18:14] 2024-05-17 21:17:48,240 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 14:18:14] 2024-05-17 21:17:48,279 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 14:18:14] 2024-05-17 21:17:48,279 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 14:18:14] 2024-05-17 21:17:48,326 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 14:18:14] 2024-05-17 21:17:50,742 | INFO     | monitor loop #297: job 0:6205810302 is in state 'finished'
[2024-05-17 14:18:14] 2024-05-17 21:17:50,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 14:18:14] 2024-05-17 21:17:51,708 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 14:18:14] 2024-05-17 21:17:51,708 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6205810302/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 14:18:14] 2024-05-17 21:17:51,710 | INFO     | extracted standard info from prmon json
[2024-05-17 14:18:14] 2024-05-17 21:17:51,710 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 14:18:14] 2024-05-17 21:17:51,710 | WARNING  | GPU info not found in prmon json
[2024-05-17 14:18:14] 2024-05-17 21:17:51,711 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 14:18:14] 2024-05-17 21:17:51,711 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 14:18:14] 2024-05-17 21:17:51,713 | INFO     | fitting pss+swap vs Time
[2024-05-17 14:18:14] 2024-05-17 21:17:51,713 | INFO     | model: linear, x: [1715977198.0, 1715977259.0, 1715977320.0, 1715977381.0, 1715977442.0, 1715977503.0, 1715977564.0, 1715977625.0, 1715977686.0, 1715977747.0, 1715
[2024-05-17 14:18:14] 2024-05-17 21:17:51,713 | INFO     | sum of square deviations: 51573060.0
[2024-05-17 14:18:14] 2024-05-17 21:17:51,714 | INFO     | sum of deviations: 20985079212.0
[2024-05-17 14:18:14] 2024-05-17 21:17:51,714 | INFO     | mean x: 1715978845.0
[2024-05-17 14:18:14] 2024-05-17 21:17:51,714 | INFO     | mean y: 2775416.2545454544
[2024-05-17 14:18:14] 2024-05-17 21:17:51,714 | INFO     | -- intersect: -698229053147.7529
[2024-05-17 14:18:14] 2024-05-17 21:17:51,714 | INFO     | intersect: -698229053147.7529
[2024-05-17 14:18:14] 2024-05-17 21:17:51,715 | INFO     | chi2: 2.0360037018739976
[2024-05-17 14:18:14] 2024-05-17 21:17:51,715 | INFO     | -- intersect: -698229053147.7529
[2024-05-17 14:18:14] 2024-05-17 21:17:51,715 | INFO     | current memory leak: 406.90 B/s (using 55 data points, chi2=2.04)
[2024-05-17 14:18:14] 2024-05-17 21:17:51,716 | INFO     | ..............................
[2024-05-17 14:18:14] 2024-05-17 21:17:51,716 | INFO     | . Timing measurements:
[2024-05-17 14:18:14] 2024-05-17 21:17:51,716 | INFO     | . get job = 0 s
[2024-05-17 14:18:14] 2024-05-17 21:17:51,716 | INFO     | . initial setup = 2 s
[2024-05-17 14:18:14] 2024-05-17 21:17:51,716 | INFO     | . payload setup = 5 s
[2024-05-17 14:18:14] 2024-05-17 21:17:51,716 | INFO     | . stage-in = 0 s
[2024-05-17 14:18:14] 2024-05-17 21:17:51,716 | INFO     | . payload execution = 3770 s
[2024-05-17 14:18:14] 2024-05-17 21:17:51,716 | INFO     | . stage-out = 0 s
[2024-05-17 14:18:14] 2024-05-17 21:17:51,716 | INFO     | . log creation = 0 s
[2024-05-17 14:18:14] 2024-05-17 21:17:51,717 | INFO     | ..............................
[2024-05-17 14:18:14] 2024-05-17 21:17:51,807 | INFO     | 
[2024-05-17 14:18:14] 2024-05-17 21:17:51,807 | INFO     | job summary report
[2024-05-17 14:18:14] 2024-05-17 21:17:51,807 | INFO     | --------------------------------------------------
[2024-05-17 14:18:14] 2024-05-17 21:17:51,807 | INFO     | PanDA job id: 6205810302
[2024-05-17 14:18:14] 2024-05-17 21:17:51,807 | INFO     | task id: 38776125
[2024-05-17 14:18:14] 2024-05-17 21:17:51,807 | INFO     | errors: (none)
[2024-05-17 14:18:14] 2024-05-17 21:17:51,808 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 14:18:14] 2024-05-17 21:17:51,808 | INFO     | pilot state: finished 
[2024-05-17 14:18:14] 2024-05-17 21:17:51,808 | INFO     | transexitcode: 0
[2024-05-17 14:18:14] 2024-05-17 21:17:51,808 | INFO     | exeerrorcode: 0
[2024-05-17 14:18:14] 2024-05-17 21:17:51,808 | INFO     | exeerrordiag: 
[2024-05-17 14:18:14] 2024-05-17 21:17:51,808 | INFO     | exitcode: 0
[2024-05-17 14:18:14] 2024-05-17 21:17:51,808 | INFO     | exitmsg: OK
[2024-05-17 14:18:14] 2024-05-17 21:17:51,808 | INFO     | cpuconsumptiontime: 32668 s
[2024-05-17 14:18:14] 2024-05-17 21:17:51,808 | INFO     | nevents: 400
[2024-05-17 14:18:14] 2024-05-17 21:17:51,809 | INFO     | neventsw: 0
[2024-05-17 14:18:14] 2024-05-17 21:17:51,809 | INFO     | pid: 201638
[2024-05-17 14:18:14] 2024-05-17 21:17:51,809 | INFO     | pgrp: 201638
[2024-05-17 14:18:14] 2024-05-17 21:17:51,809 | INFO     | corecount: 12
[2024-05-17 14:18:14] 2024-05-17 21:17:51,809 | INFO     | event service: False
[2024-05-17 14:18:14] 2024-05-17 21:17:51,809 | INFO     | sizes: {0: 2392190, 4: 2392396, 11: 2392424, 3779: 2418145, 3780: 2427099, 3782: 2427155, 3787: 2427453}
[2024-05-17 14:18:14] 2024-05-17 21:17:51,809 | INFO     | --------------------------------------------------
[2024-05-17 14:18:14] 2024-05-17 21:17:51,809 | INFO     | 
[2024-05-17 14:18:14] 2024-05-17 21:17:51,809 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 14:18:14] 2024-05-17 21:17:51,837 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,838 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,838 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,838 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,838 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,838 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,838 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,839 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,839 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,839 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,839 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,839 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,839 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,839 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,839 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,839 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,839 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,840 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 14:18:14] 2024-05-17 21:17:51,840 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,840 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 14:18:14] 2024-05-17 21:17:51,840 | INFO     | job 6205810302 has completed (purged errors)
[2024-05-17 14:18:14] 2024-05-17 21:17:51,840 | INFO     | overall cleanup function is called
[2024-05-17 14:18:14] 2024-05-17 21:17:52,849 | INFO     | --- collectZombieJob: --- 10, [201638]
[2024-05-17 14:18:14] 2024-05-17 21:17:52,849 | INFO     | zombie collector waiting for pid 201638
[2024-05-17 14:18:14] 2024-05-17 21:17:52,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 14:18:14] 2024-05-17 21:17:53,854 | INFO     | collected zombie processes
[2024-05-17 14:18:14] 2024-05-17 21:17:53,854 | INFO     | will now attempt to kill all subprocesses of pid=201638
[2024-05-17 14:18:14] 2024-05-17 21:17:54,080 | INFO     | process IDs to be killed: [201638] (in reverse order)
[2024-05-17 14:18:14] 2024-05-17 21:17:54,231 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 14:18:14] 2024-05-17 21:17:54,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 14:18:14] 2024-05-17 21:17:54,245 | INFO     | did not find any defunct processes belonging to 201638
[2024-05-17 14:18:14] 2024-05-17 21:17:54,257 | INFO     | did not find any defunct processes belonging to 201638
[2024-05-17 14:18:14] 2024-05-17 21:17:54,258 | INFO     | ready for new job
[2024-05-17 14:18:14] 2024-05-17 21:17:54,258 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 14:18:14] 2024-05-17 21:17:54,260 | INFO     | *************************************
[2024-05-17 14:18:14] 2024-05-17 21:17:54,260 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 14:18:14] 2024-05-17 21:17:54,260 | INFO     | *************************************
[2024-05-17 14:18:14] 2024-05-17 21:17:54,260 | INFO     | 
[2024-05-17 14:18:14] 2024-05-17 21:17:54,264 | INFO     | architecture information:
[2024-05-17 14:18:14] 2024-05-17 21:17:54,264 | INFO     | executing command: cat /etc/os-release
[2024-05-17 14:18:14] 2024-05-17 21:17:54,284 | INFO     | cat /etc/os-release:
[2024-05-17 14:18:14] NAME="CentOS Linux"
[2024-05-17 14:18:14] VERSION="7 (Core)"
[2024-05-17 14:18:14] ID="centos"
[2024-05-17 14:18:14] ID_LIKE="rhel fedora"
[2024-05-17 14:18:14] VERSION_ID="7"
[2024-05-17 14:18:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 14:18:14] ANSI_COLOR="0;31"
[2024-05-17 14:18:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 14:18:14] HOME_URL="https://www.centos.org/"
[2024-05-17 14:18:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 14:18:14] 
[2024-05-17 14:18:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 14:18:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 14:18:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 14:18:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 14:18:14] 
[2024-05-17 14:18:14] 2024-05-17 21:17:54,285 | INFO     | *************************************
[2024-05-17 14:18:14] 2024-05-17 21:17:54,788 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 14:18:14] 2024-05-17 21:17:54,813 | INFO     | sufficient remaining disk space (2108824748032 B)
[2024-05-17 14:18:14] 2024-05-17 21:17:54,814 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 14:18:14] 2024-05-17 21:17:54,814 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 14:18:14] 2024-05-17 21:17:54,814 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 14:18:14] 2024-05-17 21:17:54,814 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 14:18:14] 2024-05-17 21:17:54,815 | INFO     | aborting loop
[2024-05-17 14:18:14] 2024-05-17 21:17:54,948 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 14:18:14] 2024-05-17 21:17:54,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 14:18:14] 2024-05-17 21:17:54,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 14:18:14] 2024-05-17 21:17:55,155 | INFO     | all data control threads have been joined
[2024-05-17 14:18:14] 2024-05-17 21:17:55,384 | INFO     | all job control threads have been joined
[2024-05-17 14:18:14] 2024-05-17 21:17:55,819 | INFO     | [job] retrieve thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:55,820 | INFO     | [job] job monitor thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:56,119 | INFO     | [job] validate thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:56,158 | INFO     | [data] control thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:56,223 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:56,269 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:56,272 | INFO     | all payload control threads have been joined
[2024-05-17 14:18:14] 2024-05-17 21:17:56,341 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:56,378 | INFO     | [payload] failed_post thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:56,388 | INFO     | [job] control thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:56,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 14:18:14] 2024-05-17 21:17:56,818 | INFO     | [data] copytool_out thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:56,891 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 14:18:14] 2024-05-17 21:17:57,121 | INFO     | [payload] validate_post thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:57,278 | INFO     | [payload] control thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:57,308 | INFO     | [data] copytool_in thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:17:57,823 | INFO     | [job] queue monitor thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:18:00,898 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:18:05,732 | INFO     | job.realtimelogging is not enabled
[2024-05-17 14:18:14] 2024-05-17 21:18:06,734 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 14:18:14] 2024-05-17 21:18:08,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139638857791296)>', '<ExcThread(monitor, started 139638312269568)>']
[2024-05-17 14:18:14] 2024-05-17 21:18:09,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 14:18:14] 2024-05-17 21:18:09,018 | INFO     | [monitor] control thread has ended
[2024-05-17 14:18:14] 2024-05-17 21:18:13,168 | INFO     | all workflow threads have been joined
[2024-05-17 14:18:14] 2024-05-17 21:18:13,169 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 14:18:14] 2024-05-17 21:18:13,169 | INFO     | traces error code: 0
[2024-05-17 14:18:14] 2024-05-17 21:18:13,169 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 14:18:14] 2024-05-17 21:18:13,280 [wrapper] ==== pilot stdout END ====
[2024-05-17 14:18:14] 2024-05-17 21:18:13,282 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 14:18:14] 2024-05-17 21:18:13,285 [wrapper] pilotpid: 195110
[2024-05-17 14:18:14] 2024-05-17 21:18:13,287 [wrapper] Pilot exit status: 0
[2024-05-17 14:18:14] 2024-05-17 21:18:13,297 [wrapper] pandaids: 6205810302
[2024-05-17 14:18:14] 2024-05-17 21:18:13,384 [wrapper] cleanup: SIGTERM to supervisor_pilot  92304 195111
[2024-05-17 14:18:14] 2024-05-17 21:18:13,386 [wrapper] Test setup, not cleaning
[2024-05-17 14:18:14] 2024-05-17 21:18:13,388 [wrapper] ==== wrapper stdout END ====
[2024-05-17 14:18:14] 2024-05-17 21:18:13,390 [wrapper] ==== wrapper stderr END ====
[2024-05-17 14:18:14] 2024-05-17 21:18:13,393 [wrapper] apfmon messages muted
[2024-05-17 14:18:14]  *** Error codes and diagnostics ***
[2024-05-17 14:18:14]     "exeErrorCode": 0,
[2024-05-17 14:18:14]     "exeErrorDiag": "",
[2024-05-17 14:18:14]     "pilotErrorCode": 0,
[2024-05-17 14:18:14]     "pilotErrorDiag": "",
[2024-05-17 14:18:14]  *** Listing of results directory ***
[2024-05-17 14:18:14] total 831684
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc      5633 May 12 23:47 queuedata.json
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc    467845 May 12 23:49 pilot3.tar.gz
[2024-05-17 14:18:14] -rwx------ 1 boinc boinc     32251 May 12 23:50 runpilot2-wrapper.sh
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc       100 May 17 13:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 14:18:14] -rwxr-xr-x 1 boinc boinc      7986 May 17 13:14 run_atlas
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc       105 May 17 13:14 job.xml
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc      6627 May 17 13:14 init_data.xml
[2024-05-17 14:18:14] -rw-r--r-- 2 boinc boinc 603814045 May 17 13:14 EVNT.38776119._000062.pool.root.1
[2024-05-17 14:18:14] -rw-r--r-- 2 boinc boinc     17537 May 17 13:14 start_atlas.sh
[2024-05-17 14:18:14] drwxrwx--x 2 boinc boinc      4096 May 17 13:14 shared
[2024-05-17 14:18:14] -rw-r--r-- 2 boinc boinc    480004 May 17 13:14 input.tar.gz
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc         0 May 17 13:14 boinc_lockfile
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc      2633 May 17 13:14 pandaJob.out
[2024-05-17 14:18:14] -rw------- 1 boinc boinc       424 May 17 13:14 setup.sh.local
[2024-05-17 14:18:14] -rw------- 1 boinc boinc   1019073 May 17 13:14 agis_schedconf.cvmfs.json
[2024-05-17 14:18:14] -rw------- 1 boinc boinc         0 May 17 13:14 agis_ddmendpoints.agis.ALL.json
[2024-05-17 14:18:14] -rw------- 1 boinc boinc   1324701 May 17 13:14 cric_ddmendpoints.json
[2024-05-17 14:18:14] drwx------ 4 boinc boinc      4096 May 17 13:14 pilot3
[2024-05-17 14:18:14] -rw------- 1 boinc boinc 242838609 May 17 14:17 HITS.38776125._002620.pool.root.1
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc       531 May 17 14:17 boinc_task_state.xml
[2024-05-17 14:18:14] -rw------- 1 boinc boinc      1062 May 17 14:17 memory_monitor_summary.json
[2024-05-17 14:18:14] -rw------- 1 boinc boinc        95 May 17 14:17 pilot_heartbeat.json
[2024-05-17 14:18:14] -rw------- 1 boinc boinc    347503 May 17 14:17 log.38776125._002620.job.log.tgz.1
[2024-05-17 14:18:14] -rw------- 1 boinc boinc      7761 May 17 14:17 heartbeat.json
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc      8192 May 17 14:17 boinc_mmap_file
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc        27 May 17 14:17 wrapper_checkpoint.txt
[2024-05-17 14:18:14] -rw------- 1 boinc boinc      4282 May 17 14:18 pilotlog.txt
[2024-05-17 14:18:14] -rw------- 1 boinc boinc    384291 May 17 14:18 log.38776125._002620.job.log.1
[2024-05-17 14:18:14] -rw------- 1 boinc boinc       357 May 17 14:18 output.list
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc       620 May 17 14:18 runtime_log
[2024-05-17 14:18:14] -rw------- 1 boinc boinc    747520 May 17 14:18 result.tar.gz
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc     11286 May 17 14:18 runtime_log.err
[2024-05-17 14:18:14] -rw------- 1 boinc boinc       654 May 17 14:18 pFWMDmdheQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmIaJKDmNARQqm.diag
[2024-05-17 14:18:14] -rw-r--r-- 1 boinc boinc     21609 May 17 14:18 stderr.txt
[2024-05-17 14:18:14] HITS file was successfully produced:
[2024-05-17 14:18:14] -rw------- 1 boinc boinc 242838609 May 17 14:17 shared/HITS.pool.root.1
[2024-05-17 14:18:14]  *** Contents of shared directory: ***
[2024-05-17 14:18:14] total 828044
[2024-05-17 14:18:14] -rw-r--r-- 2 boinc boinc 603814045 May 17 13:14 ATLAS.root_0
[2024-05-17 14:18:14] -rw-r--r-- 2 boinc boinc     17537 May 17 13:14 start_atlas.sh
[2024-05-17 14:18:14] -rw-r--r-- 2 boinc boinc    480004 May 17 13:14 input.tar.gz
[2024-05-17 14:18:14] -rw------- 1 boinc boinc 242838609 May 17 14:17 HITS.pool.root.1
[2024-05-17 14:18:14] -rw------- 1 boinc boinc    747520 May 17 14:18 result.tar.gz
14:18:15 (190889): run_atlas exited; CPU time 32380.278166
14:18:15 (190889): called boinc_finish(0)

</stderr_txt>
]]>

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