Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:43:57 (4057781): wrapper (7.7.26015): starting
18:43:57 (4057781): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 18:43:57] Arguments: --nthreads 4
[2024-05-16 18:43:57] Threads: 4
[2024-05-16 18:43:57] Checking for CVMFS
[2024-05-16 18:43:57] No cvmfs_config command found, will try listing directly
[2024-05-16 18:43:57] CVMFS is ok
[2024-05-16 18:43:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 18:43:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 18:43:57] Further information can be found at the LHC@home message board.
[2024-05-16 18:43:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 18:43:57] Checking for apptainer binary...
[2024-05-16 18:43:57] which: no apptainer in ((null))
[2024-05-16 18:43:57] apptainer is not installed, using version from CVMFS
[2024-05-16 18:43:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 18:43:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-16 18:43:59] apptainer works
[2024-05-16 18:43:59] Set ATHENA_PROC_NUMBER=4
[2024-05-16 18:43:59] Set ATHENA_CORE_NUMBER=4
[2024-05-16 18:43:59] Starting ATLAS job with PandaID=6205808632
[2024-05-16 18:43:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 22:48:11]  *** The last 200 lines of the pilot log: ***
[2024-05-16 22:48:11] 2024-05-16 20:47:54,362 | INFO     | intersect: -41290098102.855194
[2024-05-16 22:48:11] 2024-05-16 20:47:54,362 | INFO     | chi2: 4.059638504102729
[2024-05-16 22:48:11] 2024-05-16 20:47:54,362 | INFO     | model: linear, x: [1715877890.0, 1715877951.0, 1715878012.0, 1715878073.0, 1715878134.0, 1715878195.0, 1715878256.0, 1715878317.0, 1715878378.0, 1715878439.0, 1715
[2024-05-16 22:48:11] 2024-05-16 20:47:54,362 | INFO     | sum of square deviations: 3972995422.5
[2024-05-16 22:48:11] 2024-05-16 20:47:54,363 | INFO     | sum of deviations: 99481336197.00002
[2024-05-16 22:48:11] 2024-05-16 20:47:54,364 | INFO     | mean x: 1715884996.5
[2024-05-16 22:48:11] 2024-05-16 20:47:54,364 | INFO     | mean y: 2276402.6495726495
[2024-05-16 22:48:11] 2024-05-16 20:47:54,364 | INFO     | -- intersect: -42962417501.97943
[2024-05-16 22:48:11] 2024-05-16 20:47:54,364 | INFO     | intersect: -42962417501.97943
[2024-05-16 22:48:11] 2024-05-16 20:47:54,364 | INFO     | chi2: 4.061072668082184
[2024-05-16 22:48:11] 2024-05-16 20:47:54,364 | INFO     | current chi2=4.061072668082184 (change=-0.03532738144061916 %)
[2024-05-16 22:48:11] 2024-05-16 20:47:54,364 | INFO     | right removable region: 233
[2024-05-16 22:48:11] 2024-05-16 20:47:54,364 | INFO     | model: linear, x: [1715878195.0, 1715878256.0, 1715878317.0, 1715878378.0, 1715878439.0, 1715878500.0, 1715878561.0, 1715878622.0, 1715878683.0, 1715878744.0, 1715
[2024-05-16 22:48:11] 2024-05-16 20:47:54,364 | INFO     | sum of square deviations: 3972995422.5
[2024-05-16 22:48:11] 2024-05-16 20:47:54,365 | INFO     | sum of deviations: 46638656540.0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,365 | INFO     | mean x: 1715885301.5
[2024-05-16 22:48:11] 2024-05-16 20:47:54,365 | INFO     | mean y: 2310099.717948718
[2024-05-16 22:48:11] 2024-05-16 20:47:54,365 | INFO     | -- intersect: -20140322027.538887
[2024-05-16 22:48:11] 2024-05-16 20:47:54,366 | INFO     | intersect: -20140322027.538887
[2024-05-16 22:48:11] 2024-05-16 20:47:54,366 | INFO     | chi2: 1.5531112856209877
[2024-05-16 22:48:11] 2024-05-16 20:47:54,366 | INFO     | current chi2=1.5531112856209877 (change=61.742621072014394 %)
[2024-05-16 22:48:11] 2024-05-16 20:47:54,366 | INFO     | model: linear, x: [1715878500.0, 1715878561.0, 1715878622.0, 1715878683.0, 1715878744.0, 1715878805.0, 1715878866.0, 1715878927.0, 1715878988.0, 1715879049.0, 1715
[2024-05-16 22:48:11] 2024-05-16 20:47:54,366 | INFO     | sum of square deviations: 3723716330.0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,367 | INFO     | sum of deviations: 2411706736.000001
[2024-05-16 22:48:11] 2024-05-16 20:47:54,367 | INFO     | mean x: 1715885454.0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,367 | INFO     | mean y: 2337158.1266375547
[2024-05-16 22:48:11] 2024-05-16 20:47:54,367 | INFO     | -- intersect: -1108975342.8490262
[2024-05-16 22:48:11] 2024-05-16 20:47:54,367 | INFO     | intersect: -1108975342.8490262
[2024-05-16 22:48:11] 2024-05-16 20:47:54,367 | INFO     | chi2: 0.07962771632260084
[2024-05-16 22:48:11] 2024-05-16 20:47:54,368 | INFO     | current chi2=0.07962771632260084 (change=94.87301927042768 %)
[2024-05-16 22:48:11] 2024-05-16 20:47:54,368 | INFO     | model: linear, x: [1715878805.0, 1715878866.0, 1715878927.0, 1715878988.0, 1715879049.0, 1715879110.0, 1715879171.0, 1715879232.0, 1715879293.0, 1715879354.0, 1715
[2024-05-16 22:48:11] 2024-05-16 20:47:54,368 | INFO     | sum of square deviations: 3485088600.0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,369 | INFO     | sum of deviations: -3995806341.999999
[2024-05-16 22:48:11] 2024-05-16 20:47:54,369 | INFO     | mean x: 1715885606.5
[2024-05-16 22:48:11] 2024-05-16 20:47:54,369 | INFO     | mean y: 2341203.526785714
[2024-05-16 22:48:11] 2024-05-16 20:47:54,369 | INFO     | -- intersect: 1969679017.7215855
[2024-05-16 22:48:11] 2024-05-16 20:47:54,369 | INFO     | intersect: 1969679017.7215855
[2024-05-16 22:48:11] 2024-05-16 20:47:54,369 | INFO     | chi2: 0.00935044118249671
[2024-05-16 22:48:11] 2024-05-16 20:47:54,369 | INFO     | current chi2=0.00935044118249671 (change=88.25730334320443 %)
[2024-05-16 22:48:11] 2024-05-16 20:47:54,369 | INFO     | model: linear, x: [1715879110.0, 1715879171.0, 1715879232.0, 1715879293.0, 1715879354.0, 1715879415.0, 1715879476.0, 1715879537.0, 1715879598.0, 1715879659.0, 1715
[2024-05-16 22:48:11] 2024-05-16 20:47:54,370 | INFO     | sum of square deviations: 3256879670.0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,370 | INFO     | sum of deviations: -3382730539.000001
[2024-05-16 22:48:11] 2024-05-16 20:47:54,370 | INFO     | mean x: 1715885759.0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,371 | INFO     | mean y: 2340792.00456621
[2024-05-16 22:48:11] 2024-05-16 20:47:54,371 | INFO     | -- intersect: 1784531031.2910228
[2024-05-16 22:48:11] 2024-05-16 20:47:54,371 | INFO     | intersect: 1784531031.2910228
[2024-05-16 22:48:11] 2024-05-16 20:47:54,371 | INFO     | chi2: 0.009205407348458207
[2024-05-16 22:48:11] 2024-05-16 20:47:54,371 | INFO     | current chi2=0.009205407348458207 (change=1.5510908117361821 %)
[2024-05-16 22:48:11] 2024-05-16 20:47:54,371 | INFO     | left removable region: 40
[2024-05-16 22:48:11] 2024-05-16 20:47:54,371 | INFO     | model: linear, x: [1715880330.0, 1715880391.0, 1715880452.0, 1715880513.0, 1715880574.0, 1715880635.0, 1715880696.0, 1715880757.0, 1715880818.0, 1715880879.0, 1715
[2024-05-16 22:48:11] 2024-05-16 20:47:54,371 | INFO     | sum of square deviations: 2229146912.0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,372 | INFO     | sum of deviations: 2401710788.0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,372 | INFO     | mean x: 1715886186.0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,372 | INFO     | mean y: 2336076.6632124353
[2024-05-16 22:48:11] 2024-05-16 20:47:54,372 | INFO     | -- intersect: -1846381180.0199459
[2024-05-16 22:48:11] 2024-05-16 20:47:54,372 | INFO     | intersect: -1846381180.0199459
[2024-05-16 22:48:11] 2024-05-16 20:47:54,373 | INFO     | chi2: 6.204781598264214e-05
[2024-05-16 22:48:11] 2024-05-16 20:47:54,373 | INFO     | -- intersect: -1846381180.0199459
[2024-05-16 22:48:11] 2024-05-16 20:47:54,373 | INFO     | current memory leak: 1.08 B/s (using 193 data points, chi2=0.00)
[2024-05-16 22:48:11] 2024-05-16 20:47:54,373 | INFO     | ..............................
[2024-05-16 22:48:11] 2024-05-16 20:47:54,373 | INFO     | . Timing measurements:
[2024-05-16 22:48:11] 2024-05-16 20:47:54,373 | INFO     | . get job = 0 s
[2024-05-16 22:48:11] 2024-05-16 20:47:54,373 | INFO     | . initial setup = 1 s
[2024-05-16 22:48:11] 2024-05-16 20:47:54,373 | INFO     | . payload setup = 7 s
[2024-05-16 22:48:11] 2024-05-16 20:47:54,373 | INFO     | . stage-in = 0 s
[2024-05-16 22:48:11] 2024-05-16 20:47:54,374 | INFO     | . payload execution = 14580 s
[2024-05-16 22:48:11] 2024-05-16 20:47:54,374 | INFO     | . stage-out = 0 s
[2024-05-16 22:48:11] 2024-05-16 20:47:54,374 | INFO     | . log creation = 0 s
[2024-05-16 22:48:11] 2024-05-16 20:47:54,374 | INFO     | ..............................
[2024-05-16 22:48:11] 2024-05-16 20:47:54,434 | INFO     | 
[2024-05-16 22:48:11] 2024-05-16 20:47:54,434 | INFO     | job summary report
[2024-05-16 22:48:11] 2024-05-16 20:47:54,434 | INFO     | --------------------------------------------------
[2024-05-16 22:48:11] 2024-05-16 20:47:54,434 | INFO     | PanDA job id: 6205808632
[2024-05-16 22:48:11] 2024-05-16 20:47:54,434 | INFO     | task id: 38776125
[2024-05-16 22:48:11] 2024-05-16 20:47:54,434 | INFO     | errors: (none)
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | pilot state: finished 
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | transexitcode: 0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | exeerrorcode: 0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | exeerrordiag: 
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | exitcode: 0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | exitmsg: OK
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | cpuconsumptiontime: 55077 s
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | nevents: 400
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | neventsw: 0
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | pid: 4069460
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | pgrp: 4069460
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | corecount: 4
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | event service: False
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | sizes: {0: 2390685, 1: 2392232, 7: 2392438, 12: 2392466, 14591: 2423053, 14592: 2432035, 14595: 2432219, 14599: 2432389}
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | --------------------------------------------------
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | 
[2024-05-16 22:48:11] 2024-05-16 20:47:54,435 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/1
[2024-05-16 22:48:11] 2024-05-16 20:47:54,452 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,454 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 22:48:11] 2024-05-16 20:47:54,454 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,454 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 22:48:11] 2024-05-16 20:47:54,454 | INFO     | job 6205808632 has completed (purged errors)
[2024-05-16 22:48:11] 2024-05-16 20:47:54,454 | INFO     | overall cleanup function is called
[2024-05-16 22:48:11] 2024-05-16 20:47:55,460 | INFO     | --- collectZombieJob: --- 10, [4069460]
[2024-05-16 22:48:11] 2024-05-16 20:47:55,461 | INFO     | zombie collector waiting for pid 4069460
[2024-05-16 22:48:11] 2024-05-16 20:47:55,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 22:48:11] 2024-05-16 20:47:56,465 | INFO     | collected zombie processes
[2024-05-16 22:48:11] 2024-05-16 20:47:56,466 | INFO     | will now attempt to kill all subprocesses of pid=4069460
[2024-05-16 22:48:11] 2024-05-16 20:47:56,672 | INFO     | process IDs to be killed: [4069460] (in reverse order)
[2024-05-16 22:48:11] 2024-05-16 20:47:56,791 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 22:48:11] 2024-05-16 20:47:56,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 22:48:11] 2024-05-16 20:47:56,800 | INFO     | did not find any defunct processes belonging to 4069460
[2024-05-16 22:48:11] 2024-05-16 20:47:56,808 | INFO     | did not find any defunct processes belonging to 4069460
[2024-05-16 22:48:11] 2024-05-16 20:47:56,808 | INFO     | ready for new job
[2024-05-16 22:48:11] 2024-05-16 20:47:56,808 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 22:48:11] 2024-05-16 20:47:56,810 | INFO     | *************************************
[2024-05-16 22:48:11] 2024-05-16 20:47:56,810 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 22:48:11] 2024-05-16 20:47:56,810 | INFO     | *************************************
[2024-05-16 22:48:11] 2024-05-16 20:47:56,810 | INFO     | 
[2024-05-16 22:48:11] 2024-05-16 20:47:56,813 | INFO     | architecture information:
[2024-05-16 22:48:11] 2024-05-16 20:47:56,813 | INFO     | executing command: cat /etc/os-release
[2024-05-16 22:48:11] 2024-05-16 20:47:56,826 | INFO     | cat /etc/os-release:
[2024-05-16 22:48:11] NAME="CentOS Linux"
[2024-05-16 22:48:11] VERSION="7 (Core)"
[2024-05-16 22:48:11] ID="centos"
[2024-05-16 22:48:11] ID_LIKE="rhel fedora"
[2024-05-16 22:48:11] VERSION_ID="7"
[2024-05-16 22:48:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 22:48:11] ANSI_COLOR="0;31"
[2024-05-16 22:48:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 22:48:11] HOME_URL="https://www.centos.org/"
[2024-05-16 22:48:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 22:48:11] 
[2024-05-16 22:48:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 22:48:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 22:48:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 22:48:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 22:48:11] 
[2024-05-16 22:48:11] 2024-05-16 20:47:56,827 | INFO     | *************************************
[2024-05-16 22:48:11] 2024-05-16 20:47:57,330 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/1
[2024-05-16 22:48:11] 2024-05-16 20:47:57,348 | INFO     | sufficient remaining disk space (553569484800 B)
[2024-05-16 22:48:11] 2024-05-16 20:47:57,348 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 22:48:11] 2024-05-16 20:47:57,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 22:48:11] 2024-05-16 20:47:57,349 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 22:48:11] 2024-05-16 20:47:57,349 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 22:48:11] 2024-05-16 20:47:57,349 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 22:48:11] 2024-05-16 20:47:57,349 | INFO     | aborting loop
[2024-05-16 22:48:11] 2024-05-16 20:47:57,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 22:48:11] 2024-05-16 20:47:57,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 22:48:11] 2024-05-16 20:47:57,638 | INFO     | all data control threads have been joined
[2024-05-16 22:48:11] 2024-05-16 20:47:57,914 | INFO     | all payload control threads have been joined
[2024-05-16 22:48:11] 2024-05-16 20:47:57,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 22:48:11] 2024-05-16 20:47:58,354 | INFO     | [job] retrieve thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:58,355 | INFO     | [job] job monitor thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:58,477 | INFO     | [job] validate thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:58,613 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:58,636 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:58,644 | INFO     | [data] control thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:58,732 | INFO     | [payload] validate_post thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:58,920 | INFO     | [payload] control thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:58,974 | INFO     | all job control threads have been joined
[2024-05-16 22:48:11] 2024-05-16 20:47:59,061 | INFO     | [data] copytool_in thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:59,199 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:59,322 | INFO     | [payload] failed_post thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:59,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 22:48:11] 2024-05-16 20:47:59,479 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:59,963 | INFO     | [data] copytool_out thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:47:59,980 | INFO     | [job] control thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:48:00,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 22:48:11] 2024-05-16 20:48:00,447 | INFO     | [job] queue monitor thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:48:04,327 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 22:48:11] 2024-05-16 20:48:05,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47147503273024)>', '<ExcThread(monitor, started 47147881879296)>']
[2024-05-16 22:48:11] 2024-05-16 20:48:06,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 22:48:11] 2024-05-16 20:48:06,390 | INFO     | [monitor] control thread has ended
[2024-05-16 22:48:11] 2024-05-16 20:48:10,590 | INFO     | all workflow threads have been joined
[2024-05-16 22:48:11] 2024-05-16 20:48:10,590 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 22:48:11] 2024-05-16 20:48:10,590 | INFO     | traces error code: 0
[2024-05-16 22:48:11] 2024-05-16 20:48:10,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 22:48:11] 2024-05-16 20:48:10,682 [wrapper] ==== pilot stdout END ====
[2024-05-16 22:48:11] 2024-05-16 20:48:10,684 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 22:48:11] 2024-05-16 20:48:10,687 [wrapper] pilotpid: 4062259
[2024-05-16 22:48:11] 2024-05-16 20:48:10,689 [wrapper] Pilot exit status: 0
[2024-05-16 22:48:11] 2024-05-16 20:48:10,698 [wrapper] pandaids: 6205808632
[2024-05-16 22:48:11] 2024-05-16 20:48:10,784 [wrapper] cleanup: SIGTERM to supervisor_pilot  465463 4062260
[2024-05-16 22:48:11] 2024-05-16 20:48:10,787 [wrapper] Test setup, not cleaning
[2024-05-16 22:48:11] 2024-05-16 20:48:10,789 [wrapper] ==== wrapper stdout END ====
[2024-05-16 22:48:11] 2024-05-16 20:48:10,791 [wrapper] ==== wrapper stderr END ====
[2024-05-16 22:48:11] 2024-05-16 20:48:10,796 [wrapper] apfmon messages muted
[2024-05-16 22:48:11]  *** Error codes and diagnostics ***
[2024-05-16 22:48:11]     "exeErrorCode": 0,
[2024-05-16 22:48:11]     "exeErrorDiag": "",
[2024-05-16 22:48:11]     "pilotErrorCode": 0,
[2024-05-16 22:48:11]     "pilotErrorDiag": "",
[2024-05-16 22:48:11]  *** Listing of results directory ***
[2024-05-16 22:48:11] total 823436
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc    467845 May 13 08:13 pilot3.tar.gz
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc      5633 May 13 08:47 queuedata.json
[2024-05-16 22:48:11] -rwx------ 1 boinc boinc     32251 May 13 08:48 runpilot2-wrapper.sh
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc       100 May 16 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 22:48:11] -rwxr-xr-x 1 boinc boinc      7986 May 16 18:43 run_atlas
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc       105 May 16 18:43 job.xml
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc      6663 May 16 18:43 init_data.xml
[2024-05-16 22:48:11] -rw-r--r-- 2 boinc boinc 598515673 May 16 18:43 EVNT.38776119._000050.pool.root.1
[2024-05-16 22:48:11] drwxrwx--x 2 boinc boinc      4096 May 16 18:43 shared
[2024-05-16 22:48:11] -rw-r--r-- 2 boinc boinc    480001 May 16 18:43 input.tar.gz
[2024-05-16 22:48:11] -rw-r--r-- 2 boinc boinc     17537 May 16 18:43 start_atlas.sh
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc         0 May 16 18:43 boinc_lockfile
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc      2633 May 16 18:43 pandaJob.out
[2024-05-16 22:48:11] -rw------- 1 boinc boinc       424 May 16 18:44 setup.sh.local
[2024-05-16 22:48:11] -rw------- 1 boinc boinc   1018958 May 16 18:44 agis_schedconf.cvmfs.json
[2024-05-16 22:48:11] -rw------- 1 boinc boinc   1324701 May 16 18:44 cric_ddmendpoints.json
[2024-05-16 22:48:11] drwx------ 4 boinc boinc      4096 May 16 18:44 pilot3
[2024-05-16 22:48:11] -rw------- 1 boinc boinc        95 May 16 22:47 pilot_heartbeat.json
[2024-05-16 22:48:11] -rw------- 1 boinc boinc 237334574 May 16 22:47 HITS.38776125._002333.pool.root.1
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc       532 May 16 22:47 boinc_task_state.xml
[2024-05-16 22:48:11] -rw------- 1 boinc boinc      1048 May 16 22:47 memory_monitor_summary.json
[2024-05-16 22:48:11] -rw------- 1 boinc boinc         0 May 16 22:47 agis_ddmendpoints.agis.ALL.json
[2024-05-16 22:48:11] -rw------- 1 boinc boinc    353491 May 16 22:47 log.38776125._002333.job.log.tgz.1
[2024-05-16 22:48:11] -rw------- 1 boinc boinc      7760 May 16 22:47 heartbeat.json
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc      8192 May 16 22:47 boinc_mmap_file
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc        28 May 16 22:47 wrapper_checkpoint.txt
[2024-05-16 22:48:11] -rw------- 1 boinc boinc      4344 May 16 22:48 pilotlog.txt
[2024-05-16 22:48:11] -rw------- 1 boinc boinc   1555918 May 16 22:48 log.38776125._002333.job.log.1
[2024-05-16 22:48:11] -rw------- 1 boinc boinc       357 May 16 22:48 output.list
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc       620 May 16 22:48 runtime_log
[2024-05-16 22:48:11] -rw------- 1 boinc boinc   1925120 May 16 22:48 result.tar.gz
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc     11410 May 16 22:48 runtime_log.err
[2024-05-16 22:48:11] -rw------- 1 boinc boinc       658 May 16 22:48 KXPODmKfeQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmvNGKDm9iKh8n.diag
[2024-05-16 22:48:11] -rw-r--r-- 1 boinc boinc     21369 May 16 22:48 stderr.txt
[2024-05-16 22:48:11] HITS file was successfully produced:
[2024-05-16 22:48:11] -rw------- 1 boinc boinc 237334574 May 16 22:47 shared/HITS.pool.root.1
[2024-05-16 22:48:11]  *** Contents of shared directory: ***
[2024-05-16 22:48:11] total 818644
[2024-05-16 22:48:11] -rw-r--r-- 2 boinc boinc 598515673 May 16 18:43 ATLAS.root_0
[2024-05-16 22:48:11] -rw-r--r-- 2 boinc boinc    480001 May 16 18:43 input.tar.gz
[2024-05-16 22:48:11] -rw-r--r-- 2 boinc boinc     17537 May 16 18:43 start_atlas.sh
[2024-05-16 22:48:11] -rw------- 1 boinc boinc 237334574 May 16 22:47 HITS.pool.root.1
[2024-05-16 22:48:11] -rw------- 1 boinc boinc   1925120 May 16 22:48 result.tar.gz
22:48:13 (4057781): run_atlas exited; CPU time 54735.776171
22:48:13 (4057781): called boinc_finish(0)

</stderr_txt>
]]>

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