Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:56:38 (3722307): wrapper (7.7.26015): starting
14:56:38 (3722307): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 14:56:38] Arguments: --nthreads 4
[2024-05-16 14:56:38] Threads: 4
[2024-05-16 14:56:38] Checking for CVMFS
[2024-05-16 14:56:38] No cvmfs_config command found, will try listing directly
[2024-05-16 14:56:38] CVMFS is ok
[2024-05-16 14:56:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 14:56:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 14:56:38] Further information can be found at the LHC@home message board.
[2024-05-16 14:56:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 14:56:38] Checking for apptainer binary...
[2024-05-16 14:56:38] which: no apptainer in ((null))
[2024-05-16 14:56:38] apptainer is not installed, using version from CVMFS
[2024-05-16 14:56:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 14:56:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-16 14:56:39] apptainer works
[2024-05-16 14:56:39] Set ATHENA_PROC_NUMBER=4
[2024-05-16 14:56:39] Set ATHENA_CORE_NUMBER=4
[2024-05-16 14:56:39] Starting ATLAS job with PandaID=6205808773
[2024-05-16 14:56:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 18:14:47]  *** The last 200 lines of the pilot log: ***
[2024-05-16 18:14:47] 2024-05-16 16:14:33,671 | INFO     | model: linear, x: [1715864240.0, 1715864301.0, 1715864362.0, 1715864423.0, 1715864484.0, 1715864545.0, 1715864606.0, 1715864667.0, 1715864728.0, 1715864789.0, 1715
[2024-05-16 18:14:47] 2024-05-16 16:14:33,671 | INFO     | sum of square deviations: 2093397390.0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,672 | INFO     | sum of deviations: 86489544728.99998
[2024-05-16 18:14:47] 2024-05-16 16:14:33,672 | INFO     | mean x: 1715869974.0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,672 | INFO     | mean y: 2267906.407407407
[2024-05-16 18:14:47] 2024-05-16 16:14:33,672 | INFO     | -- intersect: -70889581665.17395
[2024-05-16 18:14:47] 2024-05-16 16:14:33,672 | INFO     | intersect: -70889581665.17395
[2024-05-16 18:14:47] 2024-05-16 16:14:33,673 | INFO     | chi2: 4.219410297781434
[2024-05-16 18:14:47] 2024-05-16 16:14:33,673 | INFO     | current chi2=4.219410297781434 (change=0.021519660854160266 %)
[2024-05-16 18:14:47] 2024-05-16 16:14:33,673 | INFO     | right removable region: 188
[2024-05-16 18:14:47] 2024-05-16 16:14:33,673 | INFO     | model: linear, x: [1715864545.0, 1715864606.0, 1715864667.0, 1715864728.0, 1715864789.0, 1715864850.0, 1715864911.0, 1715864972.0, 1715865033.0, 1715865094.0, 1715
[2024-05-16 18:14:47] 2024-05-16 16:14:33,673 | INFO     | sum of square deviations: 2093397390.0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,674 | INFO     | sum of deviations: 43237606786.0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,675 | INFO     | mean x: 1715870279.0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,675 | INFO     | mean y: 2310846.074074074
[2024-05-16 18:14:47] 2024-05-16 16:14:33,675 | INFO     | -- intersect: -35437746915.33649
[2024-05-16 18:14:47] 2024-05-16 16:14:33,675 | INFO     | intersect: -35437746915.33649
[2024-05-16 18:14:47] 2024-05-16 16:14:33,675 | INFO     | chi2: 1.6058427571065588
[2024-05-16 18:14:47] 2024-05-16 16:14:33,675 | INFO     | current chi2=1.6058427571065588 (change=61.94972586487859 %)
[2024-05-16 18:14:47] 2024-05-16 16:14:33,675 | INFO     | model: linear, x: [1715864850.0, 1715864911.0, 1715864972.0, 1715865033.0, 1715865094.0, 1715865155.0, 1715865216.0, 1715865277.0, 1715865338.0, 1715865399.0, 1715
[2024-05-16 18:14:47] 2024-05-16 16:14:33,676 | INFO     | sum of square deviations: 1931608310.0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,677 | INFO     | sum of deviations: 6627707401.000001
[2024-05-16 18:14:47] 2024-05-16 16:14:33,677 | INFO     | mean x: 1715870431.5
[2024-05-16 18:14:47] 2024-05-16 16:14:33,677 | INFO     | mean y: 2345358.6413043477
[2024-05-16 18:14:47] 2024-05-16 16:14:33,677 | INFO     | -- intersect: -5885125252.835624
[2024-05-16 18:14:47] 2024-05-16 16:14:33,677 | INFO     | intersect: -5885125252.835624
[2024-05-16 18:14:47] 2024-05-16 16:14:33,677 | INFO     | chi2: 0.06940252420687573
[2024-05-16 18:14:47] 2024-05-16 16:14:33,677 | INFO     | current chi2=0.06940252420687573 (change=95.67812452995543 %)
[2024-05-16 18:14:47] 2024-05-16 16:14:33,678 | INFO     | model: linear, x: [1715865155.0, 1715865216.0, 1715865277.0, 1715865338.0, 1715865399.0, 1715865460.0, 1715865521.0, 1715865582.0, 1715865643.0, 1715865704.0, 1715
[2024-05-16 18:14:47] 2024-05-16 16:14:33,678 | INFO     | sum of square deviations: 1778377530.0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,679 | INFO     | sum of deviations: 1683656608.0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,679 | INFO     | mean x: 1715870584.0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,679 | INFO     | mean y: 2350201.620111732
[2024-05-16 18:14:47] 2024-05-16 16:14:33,679 | INFO     | -- intersect: -1622128739.7126768
[2024-05-16 18:14:47] 2024-05-16 16:14:33,679 | INFO     | intersect: -1622128739.7126768
[2024-05-16 18:14:47] 2024-05-16 16:14:33,680 | INFO     | chi2: 0.0006524861801390333
[2024-05-16 18:14:47] 2024-05-16 16:14:33,680 | INFO     | current chi2=0.0006524861801390333 (change=99.05985237915253 %)
[2024-05-16 18:14:47] 2024-05-16 16:14:33,680 | INFO     | model: linear, x: [1715865460.0, 1715865521.0, 1715865582.0, 1715865643.0, 1715865704.0, 1715865765.0, 1715865826.0, 1715865887.0, 1715865948.0, 1715866009.0, 1715
[2024-05-16 18:14:47] 2024-05-16 16:14:33,680 | INFO     | sum of square deviations: 1633472487.5
[2024-05-16 18:14:47] 2024-05-16 16:14:33,681 | INFO     | sum of deviations: 1518001439.5000002
[2024-05-16 18:14:47] 2024-05-16 16:14:33,681 | INFO     | mean x: 1715870736.5
[2024-05-16 18:14:47] 2024-05-16 16:14:33,681 | INFO     | mean y: 2350370.9137931033
[2024-05-16 18:14:47] 2024-05-16 16:14:33,681 | INFO     | -- intersect: -1592224541.082039
[2024-05-16 18:14:47] 2024-05-16 16:14:33,682 | INFO     | intersect: -1592224541.082039
[2024-05-16 18:14:47] 2024-05-16 16:14:33,682 | INFO     | chi2: 0.0005389187945624521
[2024-05-16 18:14:47] 2024-05-16 16:14:33,682 | INFO     | current chi2=0.0005389187945624521 (change=17.40533194931149 %)
[2024-05-16 18:14:47] 2024-05-16 16:14:33,682 | INFO     | left removable region: 40
[2024-05-16 18:14:47] 2024-05-16 16:14:33,682 | INFO     | model: linear, x: [1715866680.0, 1715866741.0, 1715866802.0, 1715866863.0, 1715866924.0, 1715866985.0, 1715867046.0, 1715867107.0, 1715867168.0, 1715867229.0, 1715
[2024-05-16 18:14:47] 2024-05-16 16:14:33,682 | INFO     | sum of square deviations: 1005179777.0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,683 | INFO     | sum of deviations: 545419849.0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,683 | INFO     | mean x: 1715871163.5
[2024-05-16 18:14:47] 2024-05-16 16:14:33,683 | INFO     | mean y: 2351468.608108108
[2024-05-16 18:14:47] 2024-05-16 16:14:33,683 | INFO     | -- intersect: -928696103.4916481
[2024-05-16 18:14:47] 2024-05-16 16:14:33,683 | INFO     | intersect: -928696103.4916481
[2024-05-16 18:14:47] 2024-05-16 16:14:33,684 | INFO     | chi2: 0.0001131413833360819
[2024-05-16 18:14:47] 2024-05-16 16:14:33,684 | INFO     | -- intersect: -928696103.4916481
[2024-05-16 18:14:47] 2024-05-16 16:14:33,684 | INFO     | current memory leak: 0.54 B/s (using 148 data points, chi2=0.00)
[2024-05-16 18:14:47] 2024-05-16 16:14:33,684 | INFO     | ..............................
[2024-05-16 18:14:47] 2024-05-16 16:14:33,684 | INFO     | . Timing measurements:
[2024-05-16 18:14:47] 2024-05-16 16:14:33,685 | INFO     | . get job = 0 s
[2024-05-16 18:14:47] 2024-05-16 16:14:33,685 | INFO     | . initial setup = 1 s
[2024-05-16 18:14:47] 2024-05-16 16:14:33,685 | INFO     | . payload setup = 7 s
[2024-05-16 18:14:47] 2024-05-16 16:14:33,685 | INFO     | . stage-in = 0 s
[2024-05-16 18:14:47] 2024-05-16 16:14:33,685 | INFO     | . payload execution = 11826 s
[2024-05-16 18:14:47] 2024-05-16 16:14:33,685 | INFO     | . stage-out = 1 s
[2024-05-16 18:14:47] 2024-05-16 16:14:33,685 | INFO     | . log creation = 0 s
[2024-05-16 18:14:47] 2024-05-16 16:14:33,685 | INFO     | ..............................
[2024-05-16 18:14:47] 2024-05-16 16:14:33,785 | INFO     | 
[2024-05-16 18:14:47] 2024-05-16 16:14:33,785 | INFO     | job summary report
[2024-05-16 18:14:47] 2024-05-16 16:14:33,785 | INFO     | --------------------------------------------------
[2024-05-16 18:14:47] 2024-05-16 16:14:33,785 | INFO     | PanDA job id: 6205808773
[2024-05-16 18:14:47] 2024-05-16 16:14:33,785 | INFO     | task id: 38776125
[2024-05-16 18:14:47] 2024-05-16 16:14:33,785 | INFO     | errors: (none)
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | pilot state: finished 
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | transexitcode: 0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | exeerrorcode: 0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | exeerrordiag: 
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | exitcode: 0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | exitmsg: OK
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | cpuconsumptiontime: 44553 s
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | nevents: 400
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | neventsw: 0
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | pid: 3734647
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | pgrp: 3734647
[2024-05-16 18:14:47] 2024-05-16 16:14:33,786 | INFO     | corecount: 4
[2024-05-16 18:14:47] 2024-05-16 16:14:33,787 | INFO     | event service: False
[2024-05-16 18:14:47] 2024-05-16 16:14:33,787 | INFO     | sizes: {0: 2392205, 6: 2392411, 11: 2392439, 11836: 2421777, 11837: 2421776, 11838: 2431000, 11846: 2431114}
[2024-05-16 18:14:47] 2024-05-16 16:14:33,787 | INFO     | --------------------------------------------------
[2024-05-16 18:14:47] 2024-05-16 16:14:33,787 | INFO     | 
[2024-05-16 18:14:47] 2024-05-16 16:14:33,787 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/1
[2024-05-16 18:14:47] 2024-05-16 16:14:33,810 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,811 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,811 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,811 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,812 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 18:14:47] 2024-05-16 16:14:33,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,812 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 18:14:47] 2024-05-16 16:14:33,812 | INFO     | job 6205808773 has completed (purged errors)
[2024-05-16 18:14:47] 2024-05-16 16:14:33,812 | INFO     | overall cleanup function is called
[2024-05-16 18:14:47] 2024-05-16 16:14:34,820 | INFO     | --- collectZombieJob: --- 10, [3734647]
[2024-05-16 18:14:47] 2024-05-16 16:14:34,820 | INFO     | zombie collector waiting for pid 3734647
[2024-05-16 18:14:47] 2024-05-16 16:14:34,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 18:14:47] 2024-05-16 16:14:35,825 | INFO     | collected zombie processes
[2024-05-16 18:14:47] 2024-05-16 16:14:35,825 | INFO     | will now attempt to kill all subprocesses of pid=3734647
[2024-05-16 18:14:47] 2024-05-16 16:14:36,112 | INFO     | process IDs to be killed: [3734647] (in reverse order)
[2024-05-16 18:14:47] 2024-05-16 16:14:36,343 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 18:14:47] 2024-05-16 16:14:36,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 18:14:47] 2024-05-16 16:14:36,362 | INFO     | did not find any defunct processes belonging to 3734647
[2024-05-16 18:14:47] 2024-05-16 16:14:36,377 | INFO     | did not find any defunct processes belonging to 3734647
[2024-05-16 18:14:47] 2024-05-16 16:14:36,377 | INFO     | ready for new job
[2024-05-16 18:14:47] 2024-05-16 16:14:36,377 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 18:14:47] 2024-05-16 16:14:36,379 | INFO     | *************************************
[2024-05-16 18:14:47] 2024-05-16 16:14:36,380 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 18:14:47] 2024-05-16 16:14:36,380 | INFO     | *************************************
[2024-05-16 18:14:47] 2024-05-16 16:14:36,380 | INFO     | 
[2024-05-16 18:14:47] 2024-05-16 16:14:36,387 | INFO     | architecture information:
[2024-05-16 18:14:47] 2024-05-16 16:14:36,387 | INFO     | executing command: cat /etc/os-release
[2024-05-16 18:14:47] 2024-05-16 16:14:36,412 | INFO     | cat /etc/os-release:
[2024-05-16 18:14:47] NAME="CentOS Linux"
[2024-05-16 18:14:47] VERSION="7 (Core)"
[2024-05-16 18:14:47] ID="centos"
[2024-05-16 18:14:47] ID_LIKE="rhel fedora"
[2024-05-16 18:14:47] VERSION_ID="7"
[2024-05-16 18:14:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 18:14:47] ANSI_COLOR="0;31"
[2024-05-16 18:14:47] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 18:14:47] HOME_URL="https://www.centos.org/"
[2024-05-16 18:14:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 18:14:47] 
[2024-05-16 18:14:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 18:14:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 18:14:47] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 18:14:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 18:14:47] 
[2024-05-16 18:14:47] 2024-05-16 16:14:36,412 | INFO     | *************************************
[2024-05-16 18:14:47] 2024-05-16 16:14:36,914 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/1
[2024-05-16 18:14:47] 2024-05-16 16:14:36,938 | INFO     | sufficient remaining disk space (3068867379200 B)
[2024-05-16 18:14:47] 2024-05-16 16:14:36,939 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 18:14:47] 2024-05-16 16:14:36,939 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 18:14:47] 2024-05-16 16:14:36,940 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 18:14:47] 2024-05-16 16:14:36,940 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 18:14:47] 2024-05-16 16:14:36,940 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 18:14:47] 2024-05-16 16:14:36,941 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 18:14:47] 2024-05-16 16:14:36,941 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 18:14:47] 2024-05-16 16:14:36,942 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 18:14:47] 2024-05-16 16:14:37,324 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-16 18:14:47] 2024-05-16 16:14:37,324 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-16 18:14:47] 2024-05-16 16:14:37,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 18:14:47] 2024-05-16 16:14:37,325 | INFO     | will abort loop
[2024-05-16 18:14:47] 2024-05-16 16:14:37,628 | INFO     | all data control threads have been joined
[2024-05-16 18:14:47] 2024-05-16 16:14:37,933 | INFO     | all job control threads have been joined
[2024-05-16 18:14:47] 2024-05-16 16:14:37,944 | INFO     | [job] retrieve thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:38,106 | INFO     | [payload] failed_post thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:38,263 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:38,311 | INFO     | [job] validate thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:38,324 | INFO     | all payload control threads have been joined
[2024-05-16 18:14:47] 2024-05-16 16:14:38,329 | INFO     | [job] job monitor thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:38,476 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:38,633 | INFO     | [data] control thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:38,640 | INFO     | [data] copytool_in thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:38,794 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 18:14:47] 2024-05-16 16:14:38,887 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:38,911 | INFO     | [payload] validate_post thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:38,938 | INFO     | [job] control thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:38,947 | INFO     | [data] copytool_out thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:39,170 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:39,329 | INFO     | [payload] control thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:39,799 | INFO     | [job] queue monitor thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:40,947 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 18:14:47] 2024-05-16 16:14:41,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47216840299584)>', '<ExcThread(monitor, started 47217011549952)>']
[2024-05-16 18:14:47] 2024-05-16 16:14:41,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 18:14:47] 2024-05-16 16:14:41,966 | INFO     | [monitor] control thread has ended
[2024-05-16 18:14:47] 2024-05-16 16:14:46,426 | INFO     | all workflow threads have been joined
[2024-05-16 18:14:47] 2024-05-16 16:14:46,426 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 18:14:47] 2024-05-16 16:14:46,427 | INFO     | traces error code: 0
[2024-05-16 18:14:47] 2024-05-16 16:14:46,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 18:14:47] 2024-05-16 16:14:46,532 [wrapper] ==== pilot stdout END ====
[2024-05-16 18:14:47] 2024-05-16 16:14:46,535 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 18:14:47] 2024-05-16 16:14:46,538 [wrapper] pilotpid: 3727069
[2024-05-16 18:14:47] 2024-05-16 16:14:46,540 [wrapper] Pilot exit status: 0
[2024-05-16 18:14:47] 2024-05-16 16:14:46,623 [wrapper] pandaids: 6205808773
[2024-05-16 18:14:47] 2024-05-16 16:14:46,754 [wrapper] cleanup: SIGTERM to supervisor_pilot  696999 3727070
[2024-05-16 18:14:47] 2024-05-16 16:14:46,756 [wrapper] Test setup, not cleaning
[2024-05-16 18:14:47] 2024-05-16 16:14:46,759 [wrapper] ==== wrapper stdout END ====
[2024-05-16 18:14:47] 2024-05-16 16:14:46,762 [wrapper] ==== wrapper stderr END ====
[2024-05-16 18:14:47] 2024-05-16 16:14:46,795 [wrapper] apfmon messages muted
[2024-05-16 18:14:47]  *** Error codes and diagnostics ***
[2024-05-16 18:14:47]     "exeErrorCode": 0,
[2024-05-16 18:14:47]     "exeErrorDiag": "",
[2024-05-16 18:14:47]     "pilotErrorCode": 0,
[2024-05-16 18:14:47]     "pilotErrorDiag": "",
[2024-05-16 18:14:47]  *** Listing of results directory ***
[2024-05-16 18:14:47] total 832636
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc    467845 May 13 08:13 pilot3.tar.gz
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc      5633 May 13 08:47 queuedata.json
[2024-05-16 18:14:47] -rwx------ 1 boinc boinc     32251 May 13 08:48 runpilot2-wrapper.sh
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc       100 May 16 14:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 18:14:47] -rwxr-xr-x 1 boinc boinc      7986 May 16 14:56 run_atlas
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc       105 May 16 14:56 job.xml
[2024-05-16 18:14:47] -rw-r--r-- 2 boinc boinc 602144074 May 16 14:56 EVNT.38776119._000056.pool.root.1
[2024-05-16 18:14:47] -rw-r--r-- 2 boinc boinc     17537 May 16 14:56 start_atlas.sh
[2024-05-16 18:14:47] drwxrwx--x 2 boinc boinc      4096 May 16 14:56 shared
[2024-05-16 18:14:47] -rw-r--r-- 2 boinc boinc    480001 May 16 14:56 input.tar.gz
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc      6645 May 16 14:56 init_data.xml
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc         0 May 16 14:56 boinc_lockfile
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc      2633 May 16 14:56 pandaJob.out
[2024-05-16 18:14:47] -rw------- 1 boinc boinc       424 May 16 14:56 setup.sh.local
[2024-05-16 18:14:47] -rw------- 1 boinc boinc   1010335 May 16 14:56 agis_schedconf.cvmfs.json
[2024-05-16 18:14:47] -rw------- 1 boinc boinc   1324701 May 16 14:56 cric_ddmendpoints.json
[2024-05-16 18:14:47] drwx------ 4 boinc boinc      4096 May 16 14:56 pilot3
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc       531 May 16 18:13 boinc_task_state.xml
[2024-05-16 18:14:47] -rw------- 1 boinc boinc 243854632 May 16 18:13 HITS.38776125._002474.pool.root.1
[2024-05-16 18:14:47] -rw------- 1 boinc boinc      1038 May 16 18:14 memory_monitor_summary.json
[2024-05-16 18:14:47] -rw------- 1 boinc boinc         0 May 16 18:14 agis_ddmendpoints.agis.ALL.json
[2024-05-16 18:14:47] -rw------- 1 boinc boinc    314255 May 16 18:14 log.38776125._002474.job.log.tgz.1
[2024-05-16 18:14:47] -rw------- 1 boinc boinc        95 May 16 18:14 pilot_heartbeat.json
[2024-05-16 18:14:47] -rw------- 1 boinc boinc      7713 May 16 18:14 heartbeat.json
[2024-05-16 18:14:47] -rw------- 1 boinc boinc      4532 May 16 18:14 pilotlog.txt
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc      8192 May 16 18:14 boinc_mmap_file
[2024-05-16 18:14:47] -rw------- 1 boinc boinc   1233992 May 16 18:14 log.38776125._002474.job.log.1
[2024-05-16 18:14:47] -rw------- 1 boinc boinc       357 May 16 18:14 output.list
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc       620 May 16 18:14 runtime_log
[2024-05-16 18:14:47] -rw------- 1 boinc boinc   1566720 May 16 18:14 result.tar.gz
[2024-05-16 18:14:47] -rw------- 1 boinc boinc       657 May 16 18:14 yL3NDmpeeQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmAYJKDmF6Ti3n.diag
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc     11429 May 16 18:14 runtime_log.err
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc        28 May 16 18:14 wrapper_checkpoint.txt
[2024-05-16 18:14:47] -rw-r--r-- 1 boinc boinc     21411 May 16 18:14 stderr.txt
[2024-05-16 18:14:47] HITS file was successfully produced:
[2024-05-16 18:14:47] -rw------- 1 boinc boinc 243854632 May 16 18:13 shared/HITS.pool.root.1
[2024-05-16 18:14:47]  *** Contents of shared directory: ***
[2024-05-16 18:14:47] total 828204
[2024-05-16 18:14:47] -rw-r--r-- 2 boinc boinc 602144074 May 16 14:56 ATLAS.root_0
[2024-05-16 18:14:47] -rw-r--r-- 2 boinc boinc     17537 May 16 14:56 start_atlas.sh
[2024-05-16 18:14:47] -rw-r--r-- 2 boinc boinc    480001 May 16 14:56 input.tar.gz
[2024-05-16 18:14:47] -rw------- 1 boinc boinc 243854632 May 16 18:13 HITS.pool.root.1
[2024-05-16 18:14:47] -rw------- 1 boinc boinc   1566720 May 16 18:14 result.tar.gz
18:14:49 (3722307): run_atlas exited; CPU time 44282.972550
18:14:49 (3722307): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN