Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
00:51:12 (151022): wrapper (7.7.26015): starting
00:51:12 (151022): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 00:51:12] Arguments: --nthreads 12
[2024-05-17 00:51:12] Threads: 12
[2024-05-17 00:51:12] Checking for CVMFS
[2024-05-17 00:51:12] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 00:51:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 00:51:12] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 00:51:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 00:51:13] 2.10.1.0 2809 171943 179492 132831 0 321 35647688 45568000 13723 130560 0 1108401645 99.762 701427527 16552 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-17 00:51:13] CVMFS is ok
[2024-05-17 00:51:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 00:51:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 00:51:13] Further information can be found at the LHC@home message board.
[2024-05-17 00:51:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 00:51:13] Checking for apptainer binary...
[2024-05-17 00:51:13] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 00:51:13] Running /usr/bin/apptainer --version
[2024-05-17 00:51:13] apptainer version 1.1.8-1.el7
[2024-05-17 00:51:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 00:51:14] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0075.triumf.lcg
[2024-05-17 00:51:14] apptainer works
[2024-05-17 00:51:14] Set ATHENA_PROC_NUMBER=12
[2024-05-17 00:51:14] Set ATHENA_CORE_NUMBER=12
[2024-05-17 00:51:14] Starting ATLAS job with PandaID=6205808791
[2024-05-17 00:51:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 01:57:37]  *** The last 200 lines of the pilot log: ***
[2024-05-17 01:57:37]  direct_access_wan=False
[2024-05-17 01:57:37]  domain=
[2024-05-17 01:57:37]  filesize=339651
[2024-05-17 01:57:37]  filetype=log
[2024-05-17 01:57:37]  guid=eaebdfa3-c4d8-4446-a35e-0197002150a6
[2024-05-17 01:57:37]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-17 01:57:37]  is_tar=False
[2024-05-17 01:57:37]  lfn=log.38776125._002491.job.log.tgz.1
[2024-05-17 01:57:37]  mtime=0
[2024-05-17 01:57:37]  protocol_id=None
[2024-05-17 01:57:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-17 01:57:37]  replicas=None
[2024-05-17 01:57:37]  scope=mc23_13p6TeV
[2024-05-17 01:57:37]  status=None
[2024-05-17 01:57:37]  status_code=0
[2024-05-17 01:57:37]  storage_token=
[2024-05-17 01:57:37]  surl=/home/boinc/slots/0/PanDA_Pilot-6205808791/log.38776125._002491.job.log.tgz.1
[2024-05-17 01:57:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/96/log.38776125._002491.job.log.tgz.1
[2024-05-17 01:57:37]  workdir=None
[2024-05-17 01:57:37] ]
[2024-05-17 01:57:37] 2024-05-17 08:57:15,910 | INFO     | transferring file log.38776125._002491.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6205808791/log.38776125._002491.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-17 01:57:37] 2024-05-17 08:57:15,910 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6205808791/log.38776125._002491.job.log.tgz.1 /home/boinc/slots/0/log.38776125._002491.job.log.t
[2024-05-17 01:57:37] 2024-05-17 08:57:15,933 | INFO     | adding to output.list: log.38776125._002491.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/96/log.38776125._002491.job.log.tg
[2024-05-17 01:57:37] 2024-05-17 08:57:15,934 | INFO     | summary of transferred files:
[2024-05-17 01:57:37] 2024-05-17 08:57:15,934 | INFO     |  -- lfn=log.38776125._002491.job.log.tgz.1, status_code=0, status=transferred
[2024-05-17 01:57:37] 2024-05-17 08:57:15,934 | INFO     | stage-out finished correctly
[2024-05-17 01:57:37] 2024-05-17 08:57:18,754 | WARNING  | process 161784 is no longer using CPU - aborting
[2024-05-17 01:57:37] 2024-05-17 08:57:18,754 | INFO     | will not send any job update
[2024-05-17 01:57:37] 2024-05-17 08:57:19,054 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 01:57:37] 2024-05-17 08:57:19,188 | INFO     | job 6205808791 has state=finished
[2024-05-17 01:57:37] 2024-05-17 08:57:19,189 | INFO     | preparing for final server update for job 6205808791 in state='finished'
[2024-05-17 01:57:37] 2024-05-17 08:57:19,189 | INFO     | this job has now completed (state=finished)
[2024-05-17 01:57:37] 2024-05-17 08:57:19,189 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 01:57:37] 2024-05-17 08:57:19,189 | INFO     | job 6205808791 has finished - writing final server update
[2024-05-17 01:57:37] 2024-05-17 08:57:19,190 | INFO     | total number of processed events: 400 (read)
[2024-05-17 01:57:37] 2024-05-17 08:57:19,193 | INFO     | executing command: lscpu
[2024-05-17 01:57:37] 2024-05-17 08:57:19,255 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 01:57:37] 2024-05-17 08:57:19,256 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 01:57:37] 2024-05-17 08:57:19,302 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 01:57:37] 2024-05-17 08:57:21,257 | INFO     | monitor loop #302: job 0:6205808791 is in state 'finished'
[2024-05-17 01:57:37] 2024-05-17 08:57:21,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 01:57:37] 2024-05-17 08:57:22,836 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 01:57:37] 2024-05-17 08:57:22,837 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6205808791/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 01:57:37] 2024-05-17 08:57:22,838 | INFO     | extracted standard info from prmon json
[2024-05-17 01:57:37] 2024-05-17 08:57:22,838 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 01:57:37] 2024-05-17 08:57:22,838 | WARNING  | GPU info not found in prmon json
[2024-05-17 01:57:37] 2024-05-17 08:57:22,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 01:57:37] 2024-05-17 08:57:22,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 01:57:37] 2024-05-17 08:57:22,841 | INFO     | fitting pss+swap vs Time
[2024-05-17 01:57:37] 2024-05-17 08:57:22,841 | INFO     | model: linear, x: [1715932615.0, 1715932676.0, 1715932737.0, 1715932798.0, 1715932859.0, 1715932920.0, 1715932981.0, 1715933042.0, 1715933103.0, 1715933164.0, 1715
[2024-05-17 01:57:37] 2024-05-17 08:57:22,842 | INFO     | sum of square deviations: 60475192.22413797
[2024-05-17 01:57:37] 2024-05-17 08:57:22,842 | INFO     | sum of deviations: 22535024876.2931
[2024-05-17 01:57:37] 2024-05-17 08:57:22,842 | INFO     | mean x: 1715934353.5689654
[2024-05-17 01:57:37] 2024-05-17 08:57:22,842 | INFO     | mean y: 2790214.0517241377
[2024-05-17 01:57:37] 2024-05-17 08:57:22,842 | INFO     | -- intersect: -639410197518.9318
[2024-05-17 01:57:37] 2024-05-17 08:57:22,842 | INFO     | intersect: -639410197518.9318
[2024-05-17 01:57:37] 2024-05-17 08:57:22,842 | INFO     | chi2: 2.052947951568713
[2024-05-17 01:57:37] 2024-05-17 08:57:22,842 | INFO     | -- intersect: -639410197518.9318
[2024-05-17 01:57:37] 2024-05-17 08:57:22,842 | INFO     | current memory leak: 372.63 B/s (using 58 data points, chi2=2.05)
[2024-05-17 01:57:37] 2024-05-17 08:57:22,843 | INFO     | ..............................
[2024-05-17 01:57:37] 2024-05-17 08:57:22,843 | INFO     | . Timing measurements:
[2024-05-17 01:57:37] 2024-05-17 08:57:22,843 | INFO     | . get job = 0 s
[2024-05-17 01:57:37] 2024-05-17 08:57:22,843 | INFO     | . initial setup = 1 s
[2024-05-17 01:57:37] 2024-05-17 08:57:22,843 | INFO     | . payload setup = 5 s
[2024-05-17 01:57:37] 2024-05-17 08:57:22,843 | INFO     | . stage-in = 0 s
[2024-05-17 01:57:37] 2024-05-17 08:57:22,843 | INFO     | . payload execution = 3925 s
[2024-05-17 01:57:37] 2024-05-17 08:57:22,843 | INFO     | . stage-out = 0 s
[2024-05-17 01:57:37] 2024-05-17 08:57:22,843 | INFO     | . log creation = 0 s
[2024-05-17 01:57:37] 2024-05-17 08:57:22,843 | INFO     | ..............................
[2024-05-17 01:57:37] 2024-05-17 08:57:22,894 | INFO     | 
[2024-05-17 01:57:37] 2024-05-17 08:57:22,894 | INFO     | job summary report
[2024-05-17 01:57:37] 2024-05-17 08:57:22,894 | INFO     | --------------------------------------------------
[2024-05-17 01:57:37] 2024-05-17 08:57:22,894 | INFO     | PanDA job id: 6205808791
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | task id: 38776125
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | errors: (none)
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | pilot state: finished 
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | transexitcode: 0
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | exeerrorcode: 0
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | exeerrordiag: 
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | exitcode: 0
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | exitmsg: OK
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | cpuconsumptiontime: 33589 s
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | nevents: 400
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | neventsw: 0
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | pid: 161784
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | pgrp: 161784
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | corecount: 12
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | event service: False
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | sizes: {0: 2392013, 1: 2392212, 5: 2392418, 11: 2392474, 3935: 2418220, 3936: 2427174, 3940: 2427358, 3943: 2427528}
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | --------------------------------------------------
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | 
[2024-05-17 01:57:37] 2024-05-17 08:57:22,895 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 01:57:37] 2024-05-17 08:57:22,915 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,915 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,915 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,915 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | job 6205808791 has completed (purged errors)
[2024-05-17 01:57:37] 2024-05-17 08:57:22,916 | INFO     | overall cleanup function is called
[2024-05-17 01:57:37] 2024-05-17 08:57:23,919 | INFO     | --- collectZombieJob: --- 10, [161784]
[2024-05-17 01:57:37] 2024-05-17 08:57:23,919 | INFO     | zombie collector waiting for pid 161784
[2024-05-17 01:57:37] 2024-05-17 08:57:23,919 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 01:57:37] 2024-05-17 08:57:24,925 | INFO     | collected zombie processes
[2024-05-17 01:57:37] 2024-05-17 08:57:24,925 | INFO     | will now attempt to kill all subprocesses of pid=161784
[2024-05-17 01:57:37] 2024-05-17 08:57:25,093 | INFO     | process IDs to be killed: [161784] (in reverse order)
[2024-05-17 01:57:37] 2024-05-17 08:57:25,184 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 01:57:37] 2024-05-17 08:57:25,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 01:57:37] 2024-05-17 08:57:25,192 | INFO     | did not find any defunct processes belonging to 161784
[2024-05-17 01:57:37] 2024-05-17 08:57:25,197 | INFO     | did not find any defunct processes belonging to 161784
[2024-05-17 01:57:37] 2024-05-17 08:57:25,197 | INFO     | ready for new job
[2024-05-17 01:57:37] 2024-05-17 08:57:25,197 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 01:57:37] 2024-05-17 08:57:25,198 | INFO     | *************************************
[2024-05-17 01:57:37] 2024-05-17 08:57:25,198 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 01:57:37] 2024-05-17 08:57:25,198 | INFO     | *************************************
[2024-05-17 01:57:37] 2024-05-17 08:57:25,198 | INFO     | 
[2024-05-17 01:57:37] 2024-05-17 08:57:25,200 | INFO     | architecture information:
[2024-05-17 01:57:37] 2024-05-17 08:57:25,200 | INFO     | executing command: cat /etc/os-release
[2024-05-17 01:57:37] 2024-05-17 08:57:25,213 | INFO     | cat /etc/os-release:
[2024-05-17 01:57:37] NAME="CentOS Linux"
[2024-05-17 01:57:37] VERSION="7 (Core)"
[2024-05-17 01:57:37] ID="centos"
[2024-05-17 01:57:37] ID_LIKE="rhel fedora"
[2024-05-17 01:57:37] VERSION_ID="7"
[2024-05-17 01:57:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 01:57:37] ANSI_COLOR="0;31"
[2024-05-17 01:57:37] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 01:57:37] HOME_URL="https://www.centos.org/"
[2024-05-17 01:57:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 01:57:37] 
[2024-05-17 01:57:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 01:57:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 01:57:37] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 01:57:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 01:57:37] 
[2024-05-17 01:57:37] 2024-05-17 08:57:25,214 | INFO     | *************************************
[2024-05-17 01:57:37] 2024-05-17 08:57:25,716 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 01:57:37] 2024-05-17 08:57:25,742 | INFO     | sufficient remaining disk space (2181280301056 B)
[2024-05-17 01:57:37] 2024-05-17 08:57:25,742 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 01:57:37] 2024-05-17 08:57:25,743 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 01:57:37] 2024-05-17 08:57:25,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 01:57:37] 2024-05-17 08:57:25,743 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 01:57:37] 2024-05-17 08:57:25,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 01:57:37] 2024-05-17 08:57:25,744 | INFO     | aborting loop
[2024-05-17 01:57:37] 2024-05-17 08:57:25,744 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 01:57:37] 2024-05-17 08:57:25,745 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 01:57:37] 2024-05-17 08:57:25,745 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 01:57:37] 2024-05-17 08:57:26,228 | INFO     | all job control threads have been joined
[2024-05-17 01:57:37] 2024-05-17 08:57:26,257 | INFO     | all payload control threads have been joined
[2024-05-17 01:57:37] 2024-05-17 08:57:26,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 01:57:37] 2024-05-17 08:57:26,669 | INFO     | all data control threads have been joined
[2024-05-17 01:57:37] 2024-05-17 08:57:26,745 | INFO     | [job] retrieve thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:26,750 | INFO     | [job] job monitor thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:26,862 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:26,957 | INFO     | [payload] failed_post thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:27,059 | INFO     | [job] validate thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:27,062 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:27,234 | INFO     | [job] control thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:27,252 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:27,262 | INFO     | [payload] control thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:27,548 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:27,672 | INFO     | [data] control thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:27,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 01:57:37] 2024-05-17 08:57:28,005 | INFO     | [data] copytool_in thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:28,146 | INFO     | [payload] validate_post thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:28,500 | INFO     | [data] copytool_out thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:28,901 | INFO     | [job] queue monitor thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:29,751 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 01:57:37] 2024-05-17 08:57:31,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671713965888)>', '<ExcThread(monitor, started 140670765356800)>']
[2024-05-17 01:57:37] 2024-05-17 08:57:31,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 01:57:37] 2024-05-17 08:57:31,771 | INFO     | [monitor] control thread has ended
[2024-05-17 01:57:37] 2024-05-17 08:57:36,573 | INFO     | all workflow threads have been joined
[2024-05-17 01:57:37] 2024-05-17 08:57:36,573 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 01:57:37] 2024-05-17 08:57:36,573 | INFO     | traces error code: 0
[2024-05-17 01:57:37] 2024-05-17 08:57:36,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 01:57:37] 2024-05-17 08:57:36,642 [wrapper] ==== pilot stdout END ====
[2024-05-17 01:57:37] 2024-05-17 08:57:36,645 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 01:57:37] 2024-05-17 08:57:36,650 [wrapper] pilotpid: 155218
[2024-05-17 01:57:37] 2024-05-17 08:57:36,653 [wrapper] Pilot exit status: 0
[2024-05-17 01:57:37] 2024-05-17 08:57:36,663 [wrapper] pandaids: 6205808791
[2024-05-17 01:57:37] 2024-05-17 08:57:36,750 [wrapper] cleanup: SIGTERM to supervisor_pilot  42141 155219
[2024-05-17 01:57:37] 2024-05-17 08:57:36,753 [wrapper] Test setup, not cleaning
[2024-05-17 01:57:37] 2024-05-17 08:57:36,757 [wrapper] ==== wrapper stdout END ====
[2024-05-17 01:57:37] 2024-05-17 08:57:36,759 [wrapper] ==== wrapper stderr END ====
[2024-05-17 01:57:37] 2024-05-17 08:57:36,767 [wrapper] apfmon messages muted
[2024-05-17 01:57:37]  *** Error codes and diagnostics ***
[2024-05-17 01:57:37]     "exeErrorCode": 0,
[2024-05-17 01:57:37]     "exeErrorDiag": "",
[2024-05-17 01:57:37]     "pilotErrorCode": 0,
[2024-05-17 01:57:37]     "pilotErrorDiag": "",
[2024-05-17 01:57:37]  *** Listing of results directory ***
[2024-05-17 01:57:37] total 835216
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc    467845 May 12 23:13 pilot3.tar.gz
[2024-05-17 01:57:37] -rwx------ 1 boinc boinc     32251 May 12 23:45 runpilot2-wrapper.sh
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc      5633 May 12 23:46 queuedata.json
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc       100 May 17 00:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 01:57:37] -rwxr-xr-x 1 boinc boinc      7986 May 17 00:51 run_atlas
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc       105 May 17 00:51 job.xml
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc      6626 May 17 00:51 init_data.xml
[2024-05-17 01:57:37] -rw-r--r-- 2 boinc boinc 601806419 May 17 00:51 EVNT.38776119._000057.pool.root.1
[2024-05-17 01:57:37] -rw-r--r-- 2 boinc boinc     17537 May 17 00:51 start_atlas.sh
[2024-05-17 01:57:37] drwxrwx--x 2 boinc boinc      4096 May 17 00:51 shared
[2024-05-17 01:57:37] -rw-r--r-- 2 boinc boinc    480003 May 17 00:51 input.tar.gz
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc         0 May 17 00:51 boinc_lockfile
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc      2630 May 17 00:51 pandaJob.out
[2024-05-17 01:57:37] -rw------- 1 boinc boinc       424 May 17 00:51 setup.sh.local
[2024-05-17 01:57:37] -rw------- 1 boinc boinc   1019364 May 17 00:51 agis_schedconf.cvmfs.json
[2024-05-17 01:57:37] -rw------- 1 boinc boinc         0 May 17 00:51 agis_ddmendpoints.agis.ALL.json
[2024-05-17 01:57:37] -rw------- 1 boinc boinc   1324701 May 17 00:51 cric_ddmendpoints.json
[2024-05-17 01:57:37] drwx------ 4 boinc boinc      4096 May 17 00:51 pilot3
[2024-05-17 01:57:37] -rw------- 1 boinc boinc        95 May 17 01:56 pilot_heartbeat.json
[2024-05-17 01:57:37] -rw------- 1 boinc boinc 248460303 May 17 01:56 HITS.38776125._002491.pool.root.1
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc       530 May 17 01:57 boinc_task_state.xml
[2024-05-17 01:57:37] -rw------- 1 boinc boinc      1047 May 17 01:57 memory_monitor_summary.json
[2024-05-17 01:57:37] -rw------- 1 boinc boinc    339651 May 17 01:57 log.38776125._002491.job.log.tgz.1
[2024-05-17 01:57:37] -rw------- 1 boinc boinc      7756 May 17 01:57 heartbeat.json
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc      8192 May 17 01:57 boinc_mmap_file
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc        27 May 17 01:57 wrapper_checkpoint.txt
[2024-05-17 01:57:37] -rw------- 1 boinc boinc      4333 May 17 01:57 pilotlog.txt
[2024-05-17 01:57:37] -rw------- 1 boinc boinc    392026 May 17 01:57 log.38776125._002491.job.log.1
[2024-05-17 01:57:37] -rw------- 1 boinc boinc       357 May 17 01:57 output.list
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc       620 May 17 01:57 runtime_log
[2024-05-17 01:57:37] -rw------- 1 boinc boinc    747520 May 17 01:57 result.tar.gz
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc     11286 May 17 01:57 runtime_log.err
[2024-05-17 01:57:37] -rw------- 1 boinc boinc       651 May 17 01:57 jseLDmcceQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmGMGKDmxT1xcm.diag
[2024-05-17 01:57:37] -rw-r--r-- 1 boinc boinc     21446 May 17 01:57 stderr.txt
[2024-05-17 01:57:37] HITS file was successfully produced:
[2024-05-17 01:57:37] -rw------- 1 boinc boinc 248460303 May 17 01:56 shared/HITS.pool.root.1
[2024-05-17 01:57:37]  *** Contents of shared directory: ***
[2024-05-17 01:57:37] total 831576
[2024-05-17 01:57:37] -rw-r--r-- 2 boinc boinc 601806419 May 17 00:51 ATLAS.root_0
[2024-05-17 01:57:37] -rw-r--r-- 2 boinc boinc     17537 May 17 00:51 start_atlas.sh
[2024-05-17 01:57:37] -rw-r--r-- 2 boinc boinc    480003 May 17 00:51 input.tar.gz
[2024-05-17 01:57:37] -rw------- 1 boinc boinc 248460303 May 17 01:56 HITS.pool.root.1
[2024-05-17 01:57:37] -rw------- 1 boinc boinc    747520 May 17 01:57 result.tar.gz
01:57:39 (151022): run_atlas exited; CPU time 33455.783708
01:57:39 (151022): called boinc_finish(0)

</stderr_txt>
]]>

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