Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
07:45:12 (266058): wrapper (7.7.26015): starting
07:45:12 (266058): wrapper: running run_atlas (--nthreads 12)
[2024-05-15 07:45:12] Arguments: --nthreads 12
[2024-05-15 07:45:12] Threads: 12
[2024-05-15 07:45:12] Checking for CVMFS
[2024-05-15 07:45:12] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 07:45:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 07:45:12] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 07:45:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 07:45:12] 2.10.1.0 2775 169476 183896 132763 2 81 26093346 45568000 9694 130560 0 504027495 99.719 362721511 16572 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-15 07:45:12] CVMFS is ok
[2024-05-15 07:45:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 07:45:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 07:45:12] Further information can be found at the LHC@home message board.
[2024-05-15 07:45:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 07:45:12] Checking for apptainer binary...
[2024-05-15 07:45:12] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 07:45:12] Running /usr/bin/apptainer --version
[2024-05-15 07:45:13] apptainer version 1.1.8-1.el7
[2024-05-15 07:45:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 07:45:14] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0153.triumf.lcg
[2024-05-15 07:45:14] apptainer works
[2024-05-15 07:45:14] Set ATHENA_PROC_NUMBER=12
[2024-05-15 07:45:14] Set ATHENA_CORE_NUMBER=12
[2024-05-15 07:45:14] Starting ATLAS job with PandaID=6205754898
[2024-05-15 07:45:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 12:43:55]  *** The last 200 lines of the pilot log: ***
[2024-05-16 12:43:55] 2024-05-16 19:43:33,743 | INFO     | monitor loop #5342: job 0:6205754898 is in state 'finished'
[2024-05-16 12:43:55] 2024-05-16 19:43:33,743 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 12:43:55] 2024-05-16 19:43:34,566 | INFO     | job 6205754898 has state=finished
[2024-05-16 12:43:55] 2024-05-16 19:43:34,566 | INFO     | preparing for final server update for job 6205754898 in state='finished'
[2024-05-16 12:43:55] 2024-05-16 19:43:34,567 | INFO     | this job has now completed (state=finished)
[2024-05-16 12:43:55] 2024-05-16 19:43:34,567 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 12:43:55] 2024-05-16 19:43:34,567 | INFO     | job 6205754898 has finished - writing final server update
[2024-05-16 12:43:55] 2024-05-16 19:43:34,568 | INFO     | total number of processed events: 1950 (read)
[2024-05-16 12:43:55] 2024-05-16 19:43:34,574 | INFO     | executing command: lscpu
[2024-05-16 12:43:55] 2024-05-16 19:43:34,628 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-16 12:43:55] 2024-05-16 19:43:34,629 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 12:43:55] 2024-05-16 19:43:34,687 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 12:43:55] 2024-05-16 19:43:36,246 | INFO     | monitor loop #5343: job 0:6205754898 is in state 'finished'
[2024-05-16 12:43:55] 2024-05-16 19:43:36,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 12:43:55] 2024-05-16 19:43:38,750 | INFO     | monitor loop #5344: job 0:6205754898 is in state 'finished'
[2024-05-16 12:43:55] 2024-05-16 19:43:38,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 12:43:55] 2024-05-16 19:43:39,587 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-16 12:43:55] 2024-05-16 19:43:39,588 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6205754898/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 12:43:55] 2024-05-16 19:43:39,590 | INFO     | extracted standard info from prmon json
[2024-05-16 12:43:55] 2024-05-16 19:43:39,590 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 12:43:55] 2024-05-16 19:43:39,590 | WARNING  | GPU info not found in prmon json
[2024-05-16 12:43:55] 2024-05-16 19:43:39,615 | INFO     | fitting pss+swap vs Time
[2024-05-16 12:43:55] 2024-05-16 19:43:39,616 | INFO     | model: linear, x: [1715784363.0, 1715784424.0, 1715784485.0, 1715784546.0, 1715784607.0, 1715784668.0, 1715784729.0, 1715784790.0, 1715784851.0, 1715784912.0, 1715
[2024-05-16 12:43:55] 2024-05-16 19:43:39,616 | INFO     | sum of square deviations: 1457177285942.7593
[2024-05-16 12:43:55] 2024-05-16 19:43:39,659 | INFO     | sum of deviations: 10399305763222.316
[2024-05-16 12:43:55] 2024-05-16 19:43:39,659 | INFO     | mean x: 1715835180.7951515
[2024-05-16 12:43:55] 2024-05-16 19:43:39,659 | INFO     | mean y: 4346116.663636364
[2024-05-16 12:43:55] 2024-05-16 19:43:39,659 | INFO     | -- intersect: -12240900125.174606
[2024-05-16 12:43:55] 2024-05-16 19:43:39,659 | INFO     | intersect: -12240900125.174606
[2024-05-16 12:43:55] 2024-05-16 19:43:39,660 | INFO     | chi2: 27.77973206350332
[2024-05-16 12:43:55] 2024-05-16 19:43:39,662 | INFO     | model: linear, x: [1715784363.0, 1715784424.0, 1715784485.0, 1715784546.0, 1715784607.0, 1715784668.0, 1715784729.0, 1715784790.0, 1715784851.0, 1715784912.0, 1715
[2024-05-16 12:43:55] 2024-05-16 19:43:39,662 | INFO     | sum of square deviations: 1442955699038.5486
[2024-05-16 12:43:55] 2024-05-16 19:43:39,705 | INFO     | sum of deviations: 11345595904350.281
[2024-05-16 12:43:55] 2024-05-16 19:43:39,705 | INFO     | mean x: 1715835018.937386
[2024-05-16 12:43:55] 2024-05-16 19:43:39,705 | INFO     | mean y: 4356886.759878419
[2024-05-16 12:43:55] 2024-05-16 19:43:39,705 | INFO     | -- intersect: -13486820130.2254
[2024-05-16 12:43:55] 2024-05-16 19:43:39,705 | INFO     | intersect: -13486820130.2254
[2024-05-16 12:43:55] 2024-05-16 19:43:39,706 | INFO     | chi2: 24.32599818997781
[2024-05-16 12:43:55] 2024-05-16 19:43:39,706 | INFO     | current chi2=24.32599818997781 (change=12.432567260297608 %)
[2024-05-16 12:43:55] 2024-05-16 19:43:39,706 | INFO     | right removable region: 1644
[2024-05-16 12:43:55] 2024-05-16 19:43:39,707 | INFO     | model: linear, x: [1715784668.0, 1715784729.0, 1715784790.0, 1715784851.0, 1715784912.0, 1715784973.0, 1715785034.0, 1715785095.0, 1715785156.0, 1715785217.0, 1715
[2024-05-16 12:43:55] 2024-05-16 19:43:39,708 | INFO     | sum of square deviations: 1444287871784.514
[2024-05-16 12:43:55] 2024-05-16 19:43:39,750 | INFO     | sum of deviations: 9424959139035.697
[2024-05-16 12:43:55] 2024-05-16 19:43:39,750 | INFO     | mean x: 1715835334.8857143
[2024-05-16 12:43:55] 2024-05-16 19:43:39,751 | INFO     | mean y: 4357763.306990881
[2024-05-16 12:43:55] 2024-05-16 19:43:39,751 | INFO     | -- intersect: -11192632972.778263
[2024-05-16 12:43:55] 2024-05-16 19:43:39,751 | INFO     | intersect: -11192632972.778263
[2024-05-16 12:43:55] 2024-05-16 19:43:39,752 | INFO     | chi2: 23.744814493674877
[2024-05-16 12:43:55] 2024-05-16 19:43:39,752 | INFO     | current chi2=23.744814493674877 (change=14.52468137779295 %)
[2024-05-16 12:43:55] 2024-05-16 19:43:39,752 | INFO     | left removable region: 10
[2024-05-16 12:43:55] 2024-05-16 19:43:39,753 | INFO     | model: linear, x: [1715784973.0, 1715785034.0, 1715785095.0, 1715785156.0, 1715785217.0, 1715785278.0, 1715785339.0, 1715785400.0, 1715785461.0, 1715785522.0, 1715
[2024-05-16 12:43:55] 2024-05-16 19:43:39,754 | INFO     | sum of square deviations: 1414614809105.7761
[2024-05-16 12:43:55] 2024-05-16 19:43:39,796 | INFO     | sum of deviations: 9699030158369.375
[2024-05-16 12:43:55] 2024-05-16 19:43:39,796 | INFO     | mean x: 1715835294.6927783
[2024-05-16 12:43:55] 2024-05-16 19:43:39,796 | INFO     | mean y: 4381371.811505508
[2024-05-16 12:43:55] 2024-05-16 19:43:39,796 | INFO     | -- intersect: -11759908216.348377
[2024-05-16 12:43:55] 2024-05-16 19:43:39,796 | INFO     | intersect: -11759908216.348377
[2024-05-16 12:43:55] 2024-05-16 19:43:39,797 | INFO     | chi2: 16.426509297703262
[2024-05-16 12:43:55] 2024-05-16 19:43:39,797 | INFO     | -- intersect: -11759908216.348377
[2024-05-16 12:43:55] 2024-05-16 19:43:39,797 | INFO     | current memory leak: 6.86 B/s (using 1634 data points, chi2=16.43)
[2024-05-16 12:43:55] 2024-05-16 19:43:39,798 | INFO     | ..............................
[2024-05-16 12:43:55] 2024-05-16 19:43:39,798 | INFO     | . Timing measurements:
[2024-05-16 12:43:55] 2024-05-16 19:43:39,798 | INFO     | . get job = 0 s
[2024-05-16 12:43:55] 2024-05-16 19:43:39,798 | INFO     | . initial setup = 2 s
[2024-05-16 12:43:55] 2024-05-16 19:43:39,800 | INFO     | . payload setup = 13 s
[2024-05-16 12:43:55] 2024-05-16 19:43:39,800 | INFO     | . stage-in = 0 s
[2024-05-16 12:43:55] 2024-05-16 19:43:39,800 | INFO     | . payload execution = 104243 s
[2024-05-16 12:43:55] 2024-05-16 19:43:39,800 | INFO     | . stage-out = 4 s
[2024-05-16 12:43:55] 2024-05-16 19:43:39,800 | INFO     | . log creation = 1 s
[2024-05-16 12:43:55] 2024-05-16 19:43:39,800 | INFO     | ..............................
[2024-05-16 12:43:55] 2024-05-16 19:43:39,873 | INFO     | 
[2024-05-16 12:43:55] 2024-05-16 19:43:39,873 | INFO     | job summary report
[2024-05-16 12:43:55] 2024-05-16 19:43:39,873 | INFO     | --------------------------------------------------
[2024-05-16 12:43:55] 2024-05-16 19:43:39,873 | INFO     | PanDA job id: 6205754898
[2024-05-16 12:43:55] 2024-05-16 19:43:39,873 | INFO     | task id: 38734053
[2024-05-16 12:43:55] 2024-05-16 19:43:39,874 | INFO     | errors: (none)
[2024-05-16 12:43:55] 2024-05-16 19:43:39,874 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 12:43:55] 2024-05-16 19:43:39,874 | INFO     | pilot state: finished 
[2024-05-16 12:43:55] 2024-05-16 19:43:39,874 | INFO     | transexitcode: 0
[2024-05-16 12:43:55] 2024-05-16 19:43:39,874 | INFO     | exeerrorcode: 0
[2024-05-16 12:43:55] 2024-05-16 19:43:39,874 | INFO     | exeerrordiag: 
[2024-05-16 12:43:55] 2024-05-16 19:43:39,874 | INFO     | exitcode: 0
[2024-05-16 12:43:55] 2024-05-16 19:43:39,874 | INFO     | exitmsg: OK
[2024-05-16 12:43:55] 2024-05-16 19:43:39,874 | INFO     | cpuconsumptiontime: 262751 s
[2024-05-16 12:43:55] 2024-05-16 19:43:39,875 | INFO     | nevents: 1950
[2024-05-16 12:43:55] 2024-05-16 19:43:39,875 | INFO     | neventsw: 0
[2024-05-16 12:43:55] 2024-05-16 19:43:39,875 | INFO     | pid: 277278
[2024-05-16 12:43:55] 2024-05-16 19:43:39,875 | INFO     | pgrp: 277278
[2024-05-16 12:43:55] 2024-05-16 19:43:39,875 | INFO     | corecount: 12
[2024-05-16 12:43:55] 2024-05-16 19:43:39,875 | INFO     | event service: False
[2024-05-16 12:43:55] 2024-05-16 19:43:39,875 | INFO     | sizes: {0: 2396863, 1: 2397062, 5: 2397268, 11: 2397324, 104259: 2483549, 104260: 2483548, 104266: 2492686, 104269: 2492742, 104277: 2492964}
[2024-05-16 12:43:55] 2024-05-16 19:43:39,875 | INFO     | --------------------------------------------------
[2024-05-16 12:43:55] 2024-05-16 19:43:39,876 | INFO     | 
[2024-05-16 12:43:55] 2024-05-16 19:43:39,876 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-16 12:43:55] 2024-05-16 19:43:39,908 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,908 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,909 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,909 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,909 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,909 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,909 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,911 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 12:43:55] 2024-05-16 19:43:39,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,911 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 12:43:55] 2024-05-16 19:43:39,911 | INFO     | job 6205754898 has completed (purged errors)
[2024-05-16 12:43:55] 2024-05-16 19:43:39,911 | INFO     | overall cleanup function is called
[2024-05-16 12:43:55] 2024-05-16 19:43:40,924 | INFO     | --- collectZombieJob: --- 10, [277278]
[2024-05-16 12:43:55] 2024-05-16 19:43:40,925 | INFO     | zombie collector waiting for pid 277278
[2024-05-16 12:43:55] 2024-05-16 19:43:40,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 12:43:55] 2024-05-16 19:43:41,929 | INFO     | collected zombie processes
[2024-05-16 12:43:55] 2024-05-16 19:43:41,929 | INFO     | will now attempt to kill all subprocesses of pid=277278
[2024-05-16 12:43:55] 2024-05-16 19:43:42,038 | INFO     | process IDs to be killed: [277278] (in reverse order)
[2024-05-16 12:43:55] 2024-05-16 19:43:42,131 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 12:43:55] 2024-05-16 19:43:42,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 12:43:55] 2024-05-16 19:43:42,140 | INFO     | did not find any defunct processes belonging to 277278
[2024-05-16 12:43:55] 2024-05-16 19:43:42,146 | INFO     | did not find any defunct processes belonging to 277278
[2024-05-16 12:43:55] 2024-05-16 19:43:42,146 | INFO     | ready for new job
[2024-05-16 12:43:55] 2024-05-16 19:43:42,146 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 12:43:55] 2024-05-16 19:43:42,152 | INFO     | *************************************
[2024-05-16 12:43:55] 2024-05-16 19:43:42,152 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 12:43:55] 2024-05-16 19:43:42,152 | INFO     | *************************************
[2024-05-16 12:43:55] 2024-05-16 19:43:42,152 | INFO     | 
[2024-05-16 12:43:55] 2024-05-16 19:43:42,154 | INFO     | architecture information:
[2024-05-16 12:43:55] 2024-05-16 19:43:42,155 | INFO     | executing command: cat /etc/os-release
[2024-05-16 12:43:55] 2024-05-16 19:43:42,178 | INFO     | cat /etc/os-release:
[2024-05-16 12:43:55] NAME="CentOS Linux"
[2024-05-16 12:43:55] VERSION="7 (Core)"
[2024-05-16 12:43:55] ID="centos"
[2024-05-16 12:43:55] ID_LIKE="rhel fedora"
[2024-05-16 12:43:55] VERSION_ID="7"
[2024-05-16 12:43:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 12:43:55] ANSI_COLOR="0;31"
[2024-05-16 12:43:55] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 12:43:55] HOME_URL="https://www.centos.org/"
[2024-05-16 12:43:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 12:43:55] 
[2024-05-16 12:43:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 12:43:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 12:43:55] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 12:43:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 12:43:55] 
[2024-05-16 12:43:55] 2024-05-16 19:43:42,178 | INFO     | *************************************
[2024-05-16 12:43:55] 2024-05-16 19:43:42,682 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-16 12:43:55] 2024-05-16 19:43:42,709 | INFO     | sufficient remaining disk space (2216888893440 B)
[2024-05-16 12:43:55] 2024-05-16 19:43:42,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 12:43:55] 2024-05-16 19:43:42,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 12:43:55] 2024-05-16 19:43:42,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 12:43:55] 2024-05-16 19:43:42,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 12:43:55] 2024-05-16 19:43:42,711 | INFO     | aborting loop
[2024-05-16 12:43:55] 2024-05-16 19:43:43,083 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 12:43:55] 2024-05-16 19:43:43,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 12:43:55] 2024-05-16 19:43:43,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 12:43:55] 2024-05-16 19:43:43,296 | INFO     | all data control threads have been joined
[2024-05-16 12:43:55] 2024-05-16 19:43:43,308 | INFO     | all payload control threads have been joined
[2024-05-16 12:43:55] 2024-05-16 19:43:43,716 | INFO     | [job] retrieve thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:43,717 | INFO     | [job] job monitor thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:43,744 | INFO     | [data] copytool_in thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:43,800 | INFO     | all job control threads have been joined
[2024-05-16 12:43:55] 2024-05-16 19:43:43,862 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:44,056 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 12:43:55] 2024-05-16 19:43:44,140 | INFO     | [payload] failed_post thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:44,295 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:44,302 | INFO     | [data] control thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:44,309 | INFO     | [payload] control thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:44,680 | INFO     | [payload] validate_post thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:44,805 | INFO     | [job] control thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:44,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 12:43:55] 2024-05-16 19:43:44,923 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:45,072 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:45,156 | INFO     | [job] validate thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:45,879 | INFO     | [job] queue monitor thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:46,058 | INFO     | [data] copytool_out thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:46,717 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 12:43:55] 2024-05-16 19:43:48,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639637325632)>', '<ExcThread(monitor, started 140639199012608)>']
[2024-05-16 12:43:55] 2024-05-16 19:43:49,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 12:43:55] 2024-05-16 19:43:49,108 | INFO     | [monitor] control thread has ended
[2024-05-16 12:43:55] 2024-05-16 19:43:53,787 | INFO     | all workflow threads have been joined
[2024-05-16 12:43:55] 2024-05-16 19:43:53,787 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 12:43:55] 2024-05-16 19:43:53,788 | INFO     | traces error code: 0
[2024-05-16 12:43:55] 2024-05-16 19:43:53,788 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 12:43:55] 2024-05-16 19:43:53,899 [wrapper] ==== pilot stdout END ====
[2024-05-16 12:43:55] 2024-05-16 19:43:53,904 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 12:43:55] 2024-05-16 19:43:53,907 [wrapper] pilotpid: 270193
[2024-05-16 12:43:55] 2024-05-16 19:43:53,913 [wrapper] Pilot exit status: 0
[2024-05-16 12:43:55] 2024-05-16 19:43:53,937 [wrapper] pandaids: 6205754898
[2024-05-16 12:43:55] 2024-05-16 19:43:53,995 [wrapper] cleanup: SIGTERM to supervisor_pilot 259057 270194
[2024-05-16 12:43:55] 2024-05-16 19:43:53,999 [wrapper] Test setup, not cleaning
[2024-05-16 12:43:55] 2024-05-16 19:43:54,003 [wrapper] ==== wrapper stdout END ====
[2024-05-16 12:43:55] 2024-05-16 19:43:54,007 [wrapper] ==== wrapper stderr END ====
[2024-05-16 12:43:55] 2024-05-16 19:43:54,015 [wrapper] apfmon messages muted
[2024-05-16 12:43:55]  *** Error codes and diagnostics ***
[2024-05-16 12:43:55]     "exeErrorCode": 0,
[2024-05-16 12:43:55]     "exeErrorDiag": "",
[2024-05-16 12:43:55]     "pilotErrorCode": 0,
[2024-05-16 12:43:55]     "pilotErrorDiag": "",
[2024-05-16 12:43:55]  *** Listing of results directory ***
[2024-05-16 12:43:55] total 1526628
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc     467845 May 12 23:13 pilot3.tar.gz
[2024-05-16 12:43:55] -rwx------ 1 boinc boinc      32251 May 12 23:28 runpilot2-wrapper.sh
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc       5633 May 12 23:28 queuedata.json
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc        100 May 15 07:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 12:43:55] -rwxr-xr-x 1 boinc boinc       7986 May 15 07:45 run_atlas
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc        105 May 15 07:45 job.xml
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc       6622 May 15 07:45 init_data.xml
[2024-05-16 12:43:55] -rw-r--r-- 2 boinc boinc  331332641 May 15 07:45 EVNT.38734051._000360.pool.root.1
[2024-05-16 12:43:55] drwxrwx--x 2 boinc boinc       4096 May 15 07:45 shared
[2024-05-16 12:43:55] -rw-r--r-- 2 boinc boinc     480176 May 15 07:45 input.tar.gz
[2024-05-16 12:43:55] -rw-r--r-- 2 boinc boinc      17537 May 15 07:45 start_atlas.sh
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc          0 May 15 07:45 boinc_lockfile
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc       2852 May 15 07:45 pandaJob.out
[2024-05-16 12:43:55] -rw------- 1 boinc boinc        424 May 15 07:45 setup.sh.local
[2024-05-16 12:43:55] -rw------- 1 boinc boinc    1010542 May 15 07:45 agis_schedconf.cvmfs.json
[2024-05-16 12:43:55] -rw------- 1 boinc boinc    1325758 May 15 07:45 cric_ddmendpoints.json
[2024-05-16 12:43:55] drwx------ 4 boinc boinc       4096 May 15 07:45 pilot3
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc        533 May 16 11:59 boinc_task_state.xml
[2024-05-16 12:43:55] -rw------- 1 boinc boinc 1198098197 May 16 12:42 HITS.38734053._006994.pool.root.1
[2024-05-16 12:43:55] -rw------- 1 boinc boinc         95 May 16 12:43 pilot_heartbeat.json
[2024-05-16 12:43:55] -rw------- 1 boinc boinc       1076 May 16 12:43 memory_monitor_summary.json
[2024-05-16 12:43:55] -rw------- 1 boinc boinc          0 May 16 12:43 agis_ddmendpoints.agis.ALL.json
[2024-05-16 12:43:55] -rw------- 1 boinc boinc    3712525 May 16 12:43 log.38734053._006994.job.log.tgz.1
[2024-05-16 12:43:55] -rw------- 1 boinc boinc      27227 May 16 12:43 heartbeat.json
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc       8192 May 16 12:43 boinc_mmap_file
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc         29 May 16 12:43 wrapper_checkpoint.txt
[2024-05-16 12:43:55] -rw------- 1 boinc boinc       4210 May 16 12:43 pilotlog.txt
[2024-05-16 12:43:55] -rw------- 1 boinc boinc   11421450 May 16 12:43 log.38734053._006994.job.log.1
[2024-05-16 12:43:55] -rw------- 1 boinc boinc        353 May 16 12:43 output.list
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc        620 May 16 12:43 runtime_log
[2024-05-16 12:43:55] -rw------- 1 boinc boinc   15175680 May 16 12:43 result.tar.gz
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc      11288 May 16 12:43 runtime_log.err
[2024-05-16 12:43:55] -rw------- 1 boinc boinc        666 May 16 12:43 lVdLDm9LeQ5n7Olcko1bjSoqABFKDmABFKDmOtvXDmoqWKDmkyXnJm.diag
[2024-05-16 12:43:55] -rw-r--r-- 1 boinc boinc      22221 May 16 12:43 stderr.txt
[2024-05-16 12:43:55] HITS file was successfully produced:
[2024-05-16 12:43:55] -rw------- 1 boinc boinc 1198098197 May 16 12:42 shared/HITS.pool.root.1
[2024-05-16 12:43:55]  *** Contents of shared directory: ***
[2024-05-16 12:43:55] total 1508908
[2024-05-16 12:43:55] -rw-r--r-- 2 boinc boinc  331332641 May 15 07:45 ATLAS.root_0
[2024-05-16 12:43:55] -rw-r--r-- 2 boinc boinc     480176 May 15 07:45 input.tar.gz
[2024-05-16 12:43:55] -rw-r--r-- 2 boinc boinc      17537 May 15 07:45 start_atlas.sh
[2024-05-16 12:43:55] -rw------- 1 boinc boinc 1198098197 May 16 12:42 HITS.pool.root.1
[2024-05-16 12:43:55] -rw------- 1 boinc boinc   15175680 May 16 12:43 result.tar.gz
12:43:56 (266058): run_atlas exited; CPU time 258071.533426
12:43:56 (266058): called boinc_finish(0)

</stderr_txt>
]]>

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