Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:02:31 (2625202): wrapper (7.7.26015): starting
11:02:31 (2625202): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 11:02:32] Arguments: --nthreads 4
[2024-05-15 11:02:32] Threads: 4
[2024-05-15 11:02:32] Checking for CVMFS
[2024-05-15 11:02:32] No cvmfs_config command found, will try listing directly
[2024-05-15 11:02:32] CVMFS is ok
[2024-05-15 11:02:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 11:02:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 11:02:32] Further information can be found at the LHC@home message board.
[2024-05-15 11:02:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 11:02:32] Checking for apptainer binary...
[2024-05-15 11:02:32] which: no apptainer in ((null))
[2024-05-15 11:02:32] apptainer is not installed, using version from CVMFS
[2024-05-15 11:02:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 11:02:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-15 11:02:32] apptainer works
[2024-05-15 11:02:32] Set ATHENA_PROC_NUMBER=4
[2024-05-15 11:02:32] Set ATHENA_CORE_NUMBER=4
[2024-05-15 11:02:32] Starting ATLAS job with PandaID=6205729717
[2024-05-15 11:02:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 14:15:43]  *** The last 200 lines of the pilot log: ***
[2024-05-15 14:15:43] 2024-05-15 12:15:26,279 | INFO     | current chi2=4.100563172067423 (change=0.06696210478627508 %)
[2024-05-15 14:15:43] 2024-05-15 12:15:26,279 | INFO     | right removable region: 183
[2024-05-15 14:15:43] 2024-05-15 12:15:26,280 | INFO     | model: linear, x: [1715764091.0, 1715764152.0, 1715764213.0, 1715764274.0, 1715764335.0, 1715764396.0, 1715764457.0, 1715764518.0, 1715764579.0, 1715764640.0, 1715
[2024-05-15 14:15:43] 2024-05-15 12:15:26,280 | INFO     | sum of square deviations: 1931608310.0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,281 | INFO     | sum of deviations: 46549327743.49998
[2024-05-15 14:15:43] 2024-05-15 12:15:26,281 | INFO     | mean x: 1715769672.5
[2024-05-15 14:15:43] 2024-05-15 12:15:26,281 | INFO     | mean y: 2325723.0489130435
[2024-05-15 14:15:43] 2024-05-15 12:15:26,281 | INFO     | -- intersect: -41345562668.236855
[2024-05-15 14:15:43] 2024-05-15 12:15:26,281 | INFO     | intersect: -41345562668.236855
[2024-05-15 14:15:43] 2024-05-15 12:15:26,281 | INFO     | chi2: 1.600606189447723
[2024-05-15 14:15:43] 2024-05-15 12:15:26,281 | INFO     | current chi2=1.600606189447723 (change=60.9923241580625 %)
[2024-05-15 14:15:43] 2024-05-15 12:15:26,282 | INFO     | model: linear, x: [1715764396.0, 1715764457.0, 1715764518.0, 1715764579.0, 1715764640.0, 1715764701.0, 1715764762.0, 1715764823.0, 1715764884.0, 1715764945.0, 1715
[2024-05-15 14:15:43] 2024-05-15 12:15:26,282 | INFO     | sum of square deviations: 1778377530.0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,283 | INFO     | sum of deviations: 10748387514.0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,283 | INFO     | mean x: 1715769825.0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,283 | INFO     | mean y: 2361366.932960894
[2024-05-15 14:15:43] 2024-05-15 12:15:26,283 | INFO     | -- intersect: -10367629623.634697
[2024-05-15 14:15:43] 2024-05-15 12:15:26,283 | INFO     | intersect: -10367629623.634697
[2024-05-15 14:15:43] 2024-05-15 12:15:26,283 | INFO     | chi2: 0.0848088047039141
[2024-05-15 14:15:43] 2024-05-15 12:15:26,283 | INFO     | current chi2=0.0848088047039141 (change=94.7014571564804 %)
[2024-05-15 14:15:43] 2024-05-15 12:15:26,284 | INFO     | model: linear, x: [1715764701.0, 1715764762.0, 1715764823.0, 1715764884.0, 1715764945.0, 1715765006.0, 1715765067.0, 1715765128.0, 1715765189.0, 1715765250.0, 1715
[2024-05-15 14:15:43] 2024-05-15 12:15:26,284 | INFO     | sum of square deviations: 1633472487.5
[2024-05-15 14:15:43] 2024-05-15 12:15:26,285 | INFO     | sum of deviations: 4927349725.0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,285 | INFO     | mean x: 1715769977.5
[2024-05-15 14:15:43] 2024-05-15 12:15:26,285 | INFO     | mean y: 2367407.6666666665
[2024-05-15 14:15:43] 2024-05-15 12:15:26,285 | INFO     | -- intersect: -5173231686.589814
[2024-05-15 14:15:43] 2024-05-15 12:15:26,285 | INFO     | intersect: -5173231686.589814
[2024-05-15 14:15:43] 2024-05-15 12:15:26,285 | INFO     | chi2: 0.0018630838362052443
[2024-05-15 14:15:43] 2024-05-15 12:15:26,286 | INFO     | current chi2=0.0018630838362052443 (change=97.80319526644708 %)
[2024-05-15 14:15:43] 2024-05-15 12:15:26,286 | INFO     | model: linear, x: [1715765006.0, 1715765067.0, 1715765128.0, 1715765189.0, 1715765250.0, 1715765311.0, 1715765372.0, 1715765433.0, 1715765494.0, 1715765555.0, 1715
[2024-05-15 14:15:43] 2024-05-15 12:15:26,286 | INFO     | sum of square deviations: 1496660620.0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,287 | INFO     | sum of deviations: 3759181974.0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,287 | INFO     | mean x: 1715770130.0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,287 | INFO     | mean y: 2368706.721893491
[2024-05-15 14:15:43] 2024-05-15 12:15:26,287 | INFO     | -- intersect: -4307153477.555017
[2024-05-15 14:15:43] 2024-05-15 12:15:26,287 | INFO     | intersect: -4307153477.555017
[2024-05-15 14:15:43] 2024-05-15 12:15:26,287 | INFO     | chi2: 0.0009972652437310447
[2024-05-15 14:15:43] 2024-05-15 12:15:26,287 | INFO     | current chi2=0.0009972652437310447 (change=46.47233665220945 %)
[2024-05-15 14:15:43] 2024-05-15 12:15:26,288 | INFO     | model: linear, x: [1715765311.0, 1715765372.0, 1715765433.0, 1715765494.0, 1715765555.0, 1715765616.0, 1715765677.0, 1715765738.0, 1715765799.0, 1715765860.0, 1715
[2024-05-15 14:15:43] 2024-05-15 12:15:26,288 | INFO     | sum of square deviations: 1367709365.0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,288 | INFO     | sum of deviations: 3049941714.5000005
[2024-05-15 14:15:43] 2024-05-15 12:15:26,289 | INFO     | mean x: 1715770282.5
[2024-05-15 14:15:43] 2024-05-15 12:15:26,289 | INFO     | mean y: 2369545.737804878
[2024-05-15 14:15:43] 2024-05-15 12:15:26,289 | INFO     | -- intersect: -3823735247.4367304
[2024-05-15 14:15:43] 2024-05-15 12:15:26,289 | INFO     | intersect: -3823735247.4367304
[2024-05-15 14:15:43] 2024-05-15 12:15:26,289 | INFO     | chi2: 0.0007702637408332319
[2024-05-15 14:15:43] 2024-05-15 12:15:26,289 | INFO     | current chi2=0.0007702637408332319 (change=22.76239990561964 %)
[2024-05-15 14:15:43] 2024-05-15 12:15:26,289 | INFO     | left removable region: 50
[2024-05-15 14:15:43] 2024-05-15 12:15:26,289 | INFO     | model: linear, x: [1715766836.0, 1715766897.0, 1715766958.0, 1715767019.0, 1715767080.0, 1715767141.0, 1715767202.0, 1715767263.0, 1715767324.0, 1715767385.0, 1715
[2024-05-15 14:15:43] 2024-05-15 12:15:26,289 | INFO     | sum of square deviations: 729472282.0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,290 | INFO     | sum of deviations: 895456881.0000001
[2024-05-15 14:15:43] 2024-05-15 12:15:26,290 | INFO     | mean x: 1715770862.0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,290 | INFO     | mean y: 2372187.879699248
[2024-05-15 14:15:43] 2024-05-15 12:15:26,290 | INFO     | -- intersect: -2103806295.5368943
[2024-05-15 14:15:43] 2024-05-15 12:15:26,290 | INFO     | intersect: -2103806295.5368943
[2024-05-15 14:15:43] 2024-05-15 12:15:26,291 | INFO     | chi2: 5.0369728542504074e-05
[2024-05-15 14:15:43] 2024-05-15 12:15:26,291 | INFO     | -- intersect: -2103806295.5368943
[2024-05-15 14:15:43] 2024-05-15 12:15:26,291 | INFO     | current memory leak: 1.23 B/s (using 133 data points, chi2=0.00)
[2024-05-15 14:15:43] 2024-05-15 12:15:26,291 | INFO     | ..............................
[2024-05-15 14:15:43] 2024-05-15 12:15:26,291 | INFO     | . Timing measurements:
[2024-05-15 14:15:43] 2024-05-15 12:15:26,291 | INFO     | . get job = 0 s
[2024-05-15 14:15:43] 2024-05-15 12:15:26,291 | INFO     | . initial setup = 1 s
[2024-05-15 14:15:43] 2024-05-15 12:15:26,291 | INFO     | . payload setup = 5 s
[2024-05-15 14:15:43] 2024-05-15 12:15:26,292 | INFO     | . stage-in = 0 s
[2024-05-15 14:15:43] 2024-05-15 12:15:26,292 | INFO     | . payload execution = 11531 s
[2024-05-15 14:15:43] 2024-05-15 12:15:26,292 | INFO     | . stage-out = 0 s
[2024-05-15 14:15:43] 2024-05-15 12:15:26,292 | INFO     | . log creation = 0 s
[2024-05-15 14:15:43] 2024-05-15 12:15:26,292 | INFO     | ..............................
[2024-05-15 14:15:43] 2024-05-15 12:15:26,352 | INFO     | 
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | job summary report
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | --------------------------------------------------
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | PanDA job id: 6205729717
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | task id: 38776146
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | errors: (none)
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | pilot state: finished 
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | transexitcode: 0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | exeerrorcode: 0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | exeerrordiag: 
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | exitcode: 0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,353 | INFO     | exitmsg: OK
[2024-05-15 14:15:43] 2024-05-15 12:15:26,354 | INFO     | cpuconsumptiontime: 43369 s
[2024-05-15 14:15:43] 2024-05-15 12:15:26,354 | INFO     | nevents: 400
[2024-05-15 14:15:43] 2024-05-15 12:15:26,354 | INFO     | neventsw: 0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,354 | INFO     | pid: 2639666
[2024-05-15 14:15:43] 2024-05-15 12:15:26,354 | INFO     | pgrp: 2639666
[2024-05-15 14:15:43] 2024-05-15 12:15:26,354 | INFO     | corecount: 4
[2024-05-15 14:15:43] 2024-05-15 12:15:26,354 | INFO     | event service: False
[2024-05-15 14:15:43] 2024-05-15 12:15:26,354 | INFO     | sizes: {0: 2394485, 4: 2394691, 11: 2394719, 11540: 2424053, 11541: 2433037, 11545: 2433093, 11549: 2433391}
[2024-05-15 14:15:43] 2024-05-15 12:15:26,354 | INFO     | --------------------------------------------------
[2024-05-15 14:15:43] 2024-05-15 12:15:26,354 | INFO     | 
[2024-05-15 14:15:43] 2024-05-15 12:15:26,354 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2024-05-15 14:15:43] 2024-05-15 12:15:26,459 | WARNING  | process 2639666 is no longer using CPU - aborting
[2024-05-15 14:15:43] 2024-05-15 12:15:26,459 | INFO     | aborting job monitoring since job object (job id=6205729717) has expired
[2024-05-15 14:15:43] 2024-05-15 12:15:26,462 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,462 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,462 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 14:15:43] 2024-05-15 12:15:26,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,464 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 14:15:43] 2024-05-15 12:15:26,464 | INFO     | job 6205729717 has completed (purged errors)
[2024-05-15 14:15:43] 2024-05-15 12:15:26,464 | INFO     | overall cleanup function is called
[2024-05-15 14:15:43] 2024-05-15 12:15:27,470 | INFO     | --- collectZombieJob: --- 10, [2639666]
[2024-05-15 14:15:43] 2024-05-15 12:15:27,470 | INFO     | zombie collector waiting for pid 2639666
[2024-05-15 14:15:43] 2024-05-15 12:15:27,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 14:15:43] 2024-05-15 12:15:28,476 | INFO     | collected zombie processes
[2024-05-15 14:15:43] 2024-05-15 12:15:28,476 | INFO     | will now attempt to kill all subprocesses of pid=2639666
[2024-05-15 14:15:43] 2024-05-15 12:15:28,680 | INFO     | process IDs to be killed: [2639666] (in reverse order)
[2024-05-15 14:15:43] 2024-05-15 12:15:28,857 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 14:15:43] 2024-05-15 12:15:28,857 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 14:15:43] 2024-05-15 12:15:28,875 | INFO     | did not find any defunct processes belonging to 2639666
[2024-05-15 14:15:43] 2024-05-15 12:15:28,892 | INFO     | did not find any defunct processes belonging to 2639666
[2024-05-15 14:15:43] 2024-05-15 12:15:28,893 | INFO     | ready for new job
[2024-05-15 14:15:43] 2024-05-15 12:15:28,893 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 14:15:43] 2024-05-15 12:15:28,895 | INFO     | *************************************
[2024-05-15 14:15:43] 2024-05-15 12:15:28,895 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 14:15:43] 2024-05-15 12:15:28,895 | INFO     | *************************************
[2024-05-15 14:15:43] 2024-05-15 12:15:28,895 | INFO     | 
[2024-05-15 14:15:43] 2024-05-15 12:15:28,901 | INFO     | architecture information:
[2024-05-15 14:15:43] 2024-05-15 12:15:28,901 | INFO     | executing command: cat /etc/os-release
[2024-05-15 14:15:43] 2024-05-15 12:15:28,915 | INFO     | cat /etc/os-release:
[2024-05-15 14:15:43] NAME="CentOS Linux"
[2024-05-15 14:15:43] VERSION="7 (Core)"
[2024-05-15 14:15:43] ID="centos"
[2024-05-15 14:15:43] ID_LIKE="rhel fedora"
[2024-05-15 14:15:43] VERSION_ID="7"
[2024-05-15 14:15:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 14:15:43] ANSI_COLOR="0;31"
[2024-05-15 14:15:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 14:15:43] HOME_URL="https://www.centos.org/"
[2024-05-15 14:15:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 14:15:43] 
[2024-05-15 14:15:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 14:15:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 14:15:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 14:15:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 14:15:43] 
[2024-05-15 14:15:43] 2024-05-15 12:15:28,916 | INFO     | *************************************
[2024-05-15 14:15:43] 2024-05-15 12:15:29,418 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2024-05-15 14:15:43] 2024-05-15 12:15:29,435 | INFO     | sufficient remaining disk space (2998806773760 B)
[2024-05-15 14:15:43] 2024-05-15 12:15:29,435 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 14:15:43] 2024-05-15 12:15:29,435 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 14:15:43] 2024-05-15 12:15:29,436 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 14:15:43] 2024-05-15 12:15:29,966 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 14:15:43] 2024-05-15 12:15:29,966 | INFO     | aborting loop
[2024-05-15 14:15:43] 2024-05-15 12:15:29,997 | INFO     | all payload control threads have been joined
[2024-05-15 14:15:43] 2024-05-15 12:15:30,413 | INFO     | all job control threads have been joined
[2024-05-15 14:15:43] 2024-05-15 12:15:30,417 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 14:15:43] 2024-05-15 12:15:30,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 14:15:43] 2024-05-15 12:15:30,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 14:15:43] 2024-05-15 12:15:30,440 | INFO     | [job] retrieve thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:30,472 | INFO     | all data control threads have been joined
[2024-05-15 14:15:43] 2024-05-15 12:15:30,498 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:30,726 | INFO     | [data] copytool_in thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:30,838 | INFO     | [payload] validate_post thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:30,972 | INFO     | [job] job monitor thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:31,002 | INFO     | [payload] control thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:31,088 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:31,089 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:31,244 | INFO     | [job] validate thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:31,365 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 14:15:43] 2024-05-15 12:15:31,418 | INFO     | [job] control thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:31,441 | INFO     | [data] copytool_out thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:31,477 | INFO     | [data] control thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:31,566 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:31,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 14:15:43] 2024-05-15 12:15:32,021 | INFO     | [payload] failed_post thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:32,370 | INFO     | [job] queue monitor thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:35,979 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 14:15:43] 2024-05-15 12:15:37,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46956949808192)>', '<ExcThread(monitor, started 46957121320704)>']
[2024-05-15 14:15:43] 2024-05-15 12:15:37,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 14:15:43] 2024-05-15 12:15:37,449 | INFO     | [monitor] control thread has ended
[2024-05-15 14:15:43] 2024-05-15 12:15:42,316 | INFO     | all workflow threads have been joined
[2024-05-15 14:15:43] 2024-05-15 12:15:42,316 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 14:15:43] 2024-05-15 12:15:42,317 | INFO     | traces error code: 0
[2024-05-15 14:15:43] 2024-05-15 12:15:42,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 14:15:43] 2024-05-15 12:15:42,403 [wrapper] ==== pilot stdout END ====
[2024-05-15 14:15:43] 2024-05-15 12:15:42,409 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 14:15:43] 2024-05-15 12:15:42,411 [wrapper] pilotpid: 2630005
[2024-05-15 14:15:43] 2024-05-15 12:15:42,415 [wrapper] Pilot exit status: 0
[2024-05-15 14:15:43] 2024-05-15 12:15:42,431 [wrapper] pandaids: 6205729717
[2024-05-15 14:15:43] 2024-05-15 12:15:42,517 [wrapper] cleanup: SIGTERM to supervisor_pilot 3740020 2630006
[2024-05-15 14:15:43] 2024-05-15 12:15:42,519 [wrapper] Test setup, not cleaning
[2024-05-15 14:15:43] 2024-05-15 12:15:42,521 [wrapper] ==== wrapper stdout END ====
[2024-05-15 14:15:43] 2024-05-15 12:15:42,523 [wrapper] ==== wrapper stderr END ====
[2024-05-15 14:15:43] 2024-05-15 12:15:42,527 [wrapper] apfmon messages muted
[2024-05-15 14:15:43]  *** Error codes and diagnostics ***
[2024-05-15 14:15:43]     "exeErrorCode": 0,
[2024-05-15 14:15:43]     "exeErrorDiag": "",
[2024-05-15 14:15:43]     "pilotErrorCode": 0,
[2024-05-15 14:15:43]     "pilotErrorDiag": "",
[2024-05-15 14:15:43]  *** Listing of results directory ***
[2024-05-15 14:15:43] total 882104
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc    467845 May 13 07:56 pilot3.tar.gz
[2024-05-15 14:15:43] -rwx------ 1 boinc boinc     32251 May 13 08:07 runpilot2-wrapper.sh
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc      5633 May 13 08:07 queuedata.json
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc       100 May 15 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 14:15:43] -rwxr-xr-x 1 boinc boinc      7986 May 15 11:02 run_atlas
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc       105 May 15 11:02 job.xml
[2024-05-15 14:15:43] -rw-r--r-- 2 boinc boinc 616560518 May 15 11:02 EVNT.38776140._000004.pool.root.1
[2024-05-15 14:15:43] -rw-r--r-- 2 boinc boinc     17537 May 15 11:02 start_atlas.sh
[2024-05-15 14:15:43] drwxrwx--x 2 boinc boinc      4096 May 15 11:02 shared
[2024-05-15 14:15:43] -rw-r--r-- 2 boinc boinc    479980 May 15 11:02 input.tar.gz
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc      6644 May 15 11:02 init_data.xml
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc         0 May 15 11:02 boinc_lockfile
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc      2610 May 15 11:02 pandaJob.out
[2024-05-15 14:15:43] -rw------- 1 boinc boinc       424 May 15 11:02 setup.sh.local
[2024-05-15 14:15:43] -rw------- 1 boinc boinc   1007418 May 15 11:02 agis_schedconf.cvmfs.json
[2024-05-15 14:15:43] -rw------- 1 boinc boinc   1324588 May 15 11:02 cric_ddmendpoints.json
[2024-05-15 14:15:43] drwx------ 4 boinc boinc      4096 May 15 11:02 pilot3
[2024-05-15 14:15:43] -rw------- 1 boinc boinc 280073473 May 15 14:14 HITS.38776146._000138.pool.root.1
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc       531 May 15 14:14 boinc_task_state.xml
[2024-05-15 14:15:43] -rw------- 1 boinc boinc        95 May 15 14:15 pilot_heartbeat.json
[2024-05-15 14:15:43] -rw------- 1 boinc boinc      1046 May 15 14:15 memory_monitor_summary.json
[2024-05-15 14:15:43] -rw------- 1 boinc boinc         0 May 15 14:15 agis_ddmendpoints.agis.ALL.json
[2024-05-15 14:15:43] -rw------- 1 boinc boinc    319742 May 15 14:15 log.38776146._000138.job.log.tgz.1
[2024-05-15 14:15:43] -rw------- 1 boinc boinc      7724 May 15 14:15 heartbeat.json
[2024-05-15 14:15:43] -rw------- 1 boinc boinc      4223 May 15 14:15 pilotlog.txt
[2024-05-15 14:15:43] -rw------- 1 boinc boinc   1238726 May 15 14:15 log.38776146._000138.job.log.1
[2024-05-15 14:15:43] -rw------- 1 boinc boinc       357 May 15 14:15 output.list
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc       620 May 15 14:15 runtime_log
[2024-05-15 14:15:43] -rw------- 1 boinc boinc   1576960 May 15 14:15 result.tar.gz
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc     11429 May 15 14:15 runtime_log.err
[2024-05-15 14:15:43] -rw------- 1 boinc boinc       659 May 15 14:15 0ulMDm90dQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmmJGKDmutE9jn.diag
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc      8192 May 15 14:15 boinc_mmap_file
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc        28 May 15 14:15 wrapper_checkpoint.txt
[2024-05-15 14:15:43] -rw-r--r-- 1 boinc boinc     21405 May 15 14:15 stderr.txt
[2024-05-15 14:15:43] HITS file was successfully produced:
[2024-05-15 14:15:43] -rw------- 1 boinc boinc 280073473 May 15 14:14 shared/HITS.pool.root.1
[2024-05-15 14:15:43]  *** Contents of shared directory: ***
[2024-05-15 14:15:43] total 877664
[2024-05-15 14:15:43] -rw-r--r-- 2 boinc boinc 616560518 May 15 11:02 ATLAS.root_0
[2024-05-15 14:15:43] -rw-r--r-- 2 boinc boinc     17537 May 15 11:02 start_atlas.sh
[2024-05-15 14:15:43] -rw-r--r-- 2 boinc boinc    479980 May 15 11:02 input.tar.gz
[2024-05-15 14:15:43] -rw------- 1 boinc boinc 280073473 May 15 14:14 HITS.pool.root.1
[2024-05-15 14:15:43] -rw------- 1 boinc boinc   1576960 May 15 14:15 result.tar.gz
14:15:45 (2625202): run_atlas exited; CPU time 42976.617821
14:15:45 (2625202): called boinc_finish(0)

</stderr_txt>
]]>

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