Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:44:12 (2760507): wrapper (7.7.26015): starting
10:44:12 (2760507): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 10:44:12] Arguments: --nthreads 4
[2024-05-16 10:44:12] Threads: 4
[2024-05-16 10:44:12] Checking for CVMFS
[2024-05-16 10:44:12] No cvmfs_config command found, will try listing directly
[2024-05-16 10:44:12] CVMFS is ok
[2024-05-16 10:44:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 10:44:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 10:44:12] Further information can be found at the LHC@home message board.
[2024-05-16 10:44:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 10:44:12] Checking for apptainer binary...
[2024-05-16 10:44:12] which: no apptainer in ((null))
[2024-05-16 10:44:12] apptainer is not installed, using version from CVMFS
[2024-05-16 10:44:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 10:44:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-16 10:44:14] apptainer works
[2024-05-16 10:44:14] Set ATHENA_PROC_NUMBER=4
[2024-05-16 10:44:14] Set ATHENA_CORE_NUMBER=4
[2024-05-16 10:44:14] Starting ATLAS job with PandaID=6205729715
[2024-05-16 10:44:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 14:28:14]  *** The last 200 lines of the pilot log: ***
[2024-05-16 14:28:14] 2024-05-16 12:27:57,933 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 14:28:14] 2024-05-16 12:27:57,937 | INFO     | fitting pss+swap vs Time
[2024-05-16 14:28:14] 2024-05-16 12:27:57,937 | INFO     | model: linear, x: [1715849100.0, 1715849161.0, 1715849222.0, 1715849283.0, 1715849344.0, 1715849405.0, 1715849466.0, 1715849527.0, 1715849588.0, 1715849649.0, 1715
[2024-05-16 14:28:14] 2024-05-16 12:27:57,937 | INFO     | sum of square deviations: 3301699115.0
[2024-05-16 14:28:14] 2024-05-16 12:27:57,939 | INFO     | sum of deviations: 92779471736.49997
[2024-05-16 14:28:14] 2024-05-16 12:27:57,939 | INFO     | mean x: 1715855779.5
[2024-05-16 14:28:14] 2024-05-16 12:27:57,939 | INFO     | mean y: 2274308.1136363638
[2024-05-16 14:28:14] 2024-05-16 12:27:57,939 | INFO     | -- intersect: -48214170392.97487
[2024-05-16 14:28:14] 2024-05-16 12:27:57,939 | INFO     | intersect: -48214170392.97487
[2024-05-16 14:28:14] 2024-05-16 12:27:57,939 | INFO     | chi2: 5.067911785140416
[2024-05-16 14:28:14] 2024-05-16 12:27:57,940 | INFO     | model: linear, x: [1715849100.0, 1715849161.0, 1715849222.0, 1715849283.0, 1715849344.0, 1715849405.0, 1715849466.0, 1715849527.0, 1715849588.0, 1715849649.0, 1715
[2024-05-16 14:28:14] 2024-05-16 12:27:57,940 | INFO     | sum of square deviations: 3081657780.0
[2024-05-16 14:28:14] 2024-05-16 12:27:57,941 | INFO     | sum of deviations: 104460319433.00002
[2024-05-16 14:28:14] 2024-05-16 12:27:57,942 | INFO     | mean x: 1715855627.0
[2024-05-16 14:28:14] 2024-05-16 12:27:57,942 | INFO     | mean y: 2282223.6139534884
[2024-05-16 14:28:14] 2024-05-16 12:27:57,942 | INFO     | -- intersect: -58160836361.646515
[2024-05-16 14:28:14] 2024-05-16 12:27:57,942 | INFO     | intersect: -58160836361.646515
[2024-05-16 14:28:14] 2024-05-16 12:27:57,942 | INFO     | chi2: 4.270433979740769
[2024-05-16 14:28:14] 2024-05-16 12:27:57,942 | INFO     | current chi2=4.270433979740769 (change=15.735826494413843 %)
[2024-05-16 14:28:14] 2024-05-16 12:27:57,942 | INFO     | right removable region: 214
[2024-05-16 14:28:14] 2024-05-16 12:27:57,943 | INFO     | model: linear, x: [1715849405.0, 1715849466.0, 1715849527.0, 1715849588.0, 1715849649.0, 1715849710.0, 1715849771.0, 1715849832.0, 1715849893.0, 1715849954.0, 1715
[2024-05-16 14:28:14] 2024-05-16 12:27:57,943 | INFO     | sum of square deviations: 3081657780.0
[2024-05-16 14:28:14] 2024-05-16 12:27:57,944 | INFO     | sum of deviations: 40789245150.000015
[2024-05-16 14:28:14] 2024-05-16 12:27:57,944 | INFO     | mean x: 1715855932.0
[2024-05-16 14:28:14] 2024-05-16 12:27:57,944 | INFO     | mean y: 2310253.6790697672
[2024-05-16 14:28:14] 2024-05-16 12:27:57,944 | INFO     | -- intersect: -22708994261.26605
[2024-05-16 14:28:14] 2024-05-16 12:27:57,944 | INFO     | intersect: -22708994261.26605
[2024-05-16 14:28:14] 2024-05-16 12:27:57,944 | INFO     | chi2: 2.483393975021598
[2024-05-16 14:28:14] 2024-05-16 12:27:57,944 | INFO     | current chi2=2.483393975021598 (change=50.99768740444264 %)
[2024-05-16 14:28:14] 2024-05-16 12:27:57,945 | INFO     | model: linear, x: [1715849710.0, 1715849771.0, 1715849832.0, 1715849893.0, 1715849954.0, 1715850015.0, 1715850076.0, 1715850137.0, 1715850198.0, 1715850259.0, 1715
[2024-05-16 14:28:14] 2024-05-16 12:27:57,945 | INFO     | sum of square deviations: 2871616632.5
[2024-05-16 14:28:14] 2024-05-16 12:27:57,946 | INFO     | sum of deviations: -1852182009.499998
[2024-05-16 14:28:14] 2024-05-16 12:27:57,946 | INFO     | mean x: 1715856084.5
[2024-05-16 14:28:14] 2024-05-16 12:27:57,946 | INFO     | mean y: 2341217.3095238097
[2024-05-16 14:28:14] 2024-05-16 12:27:57,946 | INFO     | -- intersect: 1109061987.2875159
[2024-05-16 14:28:14] 2024-05-16 12:27:57,946 | INFO     | intersect: 1109061987.2875159
[2024-05-16 14:28:14] 2024-05-16 12:27:57,947 | INFO     | chi2: 0.8895106602045486
[2024-05-16 14:28:14] 2024-05-16 12:27:57,947 | INFO     | current chi2=0.8895106602045486 (change=64.18165344881243 %)
[2024-05-16 14:28:14] 2024-05-16 12:27:57,947 | INFO     | model: linear, x: [1715850015.0, 1715850076.0, 1715850137.0, 1715850198.0, 1715850259.0, 1715850320.0, 1715850381.0, 1715850442.0, 1715850503.0, 1715850564.0, 1715
[2024-05-16 14:28:14] 2024-05-16 12:27:57,947 | INFO     | sum of square deviations: 2671343110.0
[2024-05-16 14:28:14] 2024-05-16 12:27:57,948 | INFO     | sum of deviations: -7518505590.000002
[2024-05-16 14:28:14] 2024-05-16 12:27:57,948 | INFO     | mean x: 1715856237.0
[2024-05-16 14:28:14] 2024-05-16 12:27:57,948 | INFO     | mean y: 2345483.0975609757
[2024-05-16 14:28:14] 2024-05-16 12:27:57,948 | INFO     | -- intersect: 4831629546.693894
[2024-05-16 14:28:14] 2024-05-16 12:27:57,949 | INFO     | intersect: 4831629546.693894
[2024-05-16 14:28:14] 2024-05-16 12:27:57,949 | INFO     | chi2: 0.8382092822385002
[2024-05-16 14:28:14] 2024-05-16 12:27:57,949 | INFO     | current chi2=0.8382092822385002 (change=5.767370787242878 %)
[2024-05-16 14:28:14] 2024-05-16 12:27:57,949 | INFO     | left removable region: 30
[2024-05-16 14:28:14] 2024-05-16 12:27:57,949 | INFO     | model: linear, x: [1715850930.0, 1715850991.0, 1715851052.0, 1715851113.0, 1715851174.0, 1715851235.0, 1715851296.0, 1715851357.0, 1715851418.0, 1715851479.0, 1715
[2024-05-16 14:28:14] 2024-05-16 12:27:57,949 | INFO     | monitor loop #1020: job 0:6205729715 is in state 'finished'
[2024-05-16 14:28:14] 2024-05-16 12:27:57,950 | INFO     | sum of square deviations: 1931608310.0
[2024-05-16 14:28:14] 2024-05-16 12:27:57,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 14:28:14] 2024-05-16 12:27:57,951 | INFO     | sum of deviations: 3920543901.5
[2024-05-16 14:28:14] 2024-05-16 12:27:57,951 | INFO     | mean x: 1715856511.5
[2024-05-16 14:28:14] 2024-05-16 12:27:57,951 | INFO     | mean y: 2357163.190217391
[2024-05-16 14:28:14] 2024-05-16 12:27:57,951 | INFO     | -- intersect: -3480279946.6130586
[2024-05-16 14:28:14] 2024-05-16 12:27:57,951 | INFO     | intersect: -3480279946.6130586
[2024-05-16 14:28:14] 2024-05-16 12:27:57,952 | INFO     | chi2: 0.0006826559976598675
[2024-05-16 14:28:14] 2024-05-16 12:27:57,952 | INFO     | -- intersect: -3480279946.6130586
[2024-05-16 14:28:14] 2024-05-16 12:27:57,952 | INFO     | current memory leak: 2.03 B/s (using 184 data points, chi2=0.00)
[2024-05-16 14:28:14] 2024-05-16 12:27:57,953 | INFO     | ..............................
[2024-05-16 14:28:14] 2024-05-16 12:27:57,953 | INFO     | . Timing measurements:
[2024-05-16 14:28:14] 2024-05-16 12:27:57,953 | INFO     | . get job = 0 s
[2024-05-16 14:28:14] 2024-05-16 12:27:57,953 | INFO     | . initial setup = 1 s
[2024-05-16 14:28:14] 2024-05-16 12:27:57,953 | INFO     | . payload setup = 12 s
[2024-05-16 14:28:14] 2024-05-16 12:27:57,953 | INFO     | . stage-in = 0 s
[2024-05-16 14:28:14] 2024-05-16 12:27:57,953 | INFO     | . payload execution = 13374 s
[2024-05-16 14:28:14] 2024-05-16 12:27:57,953 | INFO     | . stage-out = 0 s
[2024-05-16 14:28:14] 2024-05-16 12:27:57,953 | INFO     | . log creation = 0 s
[2024-05-16 14:28:14] 2024-05-16 12:27:57,953 | INFO     | ..............................
[2024-05-16 14:28:14] 2024-05-16 12:27:58,366 | INFO     | 
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | job summary report
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | --------------------------------------------------
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | PanDA job id: 6205729715
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | task id: 38776146
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | errors: (none)
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | pilot state: finished 
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | transexitcode: 0
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | exeerrorcode: 0
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | exeerrordiag: 
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | exitcode: 0
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | exitmsg: OK
[2024-05-16 14:28:14] 2024-05-16 12:27:58,367 | INFO     | cpuconsumptiontime: 50581 s
[2024-05-16 14:28:14] 2024-05-16 12:27:58,368 | INFO     | nevents: 400
[2024-05-16 14:28:14] 2024-05-16 12:27:58,368 | INFO     | neventsw: 0
[2024-05-16 14:28:14] 2024-05-16 12:27:58,368 | INFO     | pid: 2775035
[2024-05-16 14:28:14] 2024-05-16 12:27:58,368 | INFO     | pgrp: 2775035
[2024-05-16 14:28:14] 2024-05-16 12:27:58,368 | INFO     | corecount: 4
[2024-05-16 14:28:14] 2024-05-16 12:27:58,368 | INFO     | event service: False
[2024-05-16 14:28:14] 2024-05-16 12:27:58,368 | INFO     | sizes: {0: 2392179, 6: 2392385, 11: 2392413, 13389: 2422412, 13390: 2422411, 13391: 2431635, 13396: 2431749}
[2024-05-16 14:28:14] 2024-05-16 12:27:58,368 | INFO     | --------------------------------------------------
[2024-05-16 14:28:14] 2024-05-16 12:27:58,368 | INFO     | 
[2024-05-16 14:28:14] 2024-05-16 12:27:58,368 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/0
[2024-05-16 14:28:14] 2024-05-16 12:27:58,389 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,389 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,389 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,389 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 14:28:14] 2024-05-16 12:27:58,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,391 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 14:28:14] 2024-05-16 12:27:58,391 | INFO     | job 6205729715 has completed (purged errors)
[2024-05-16 14:28:14] 2024-05-16 12:27:58,391 | INFO     | overall cleanup function is called
[2024-05-16 14:28:14] 2024-05-16 12:27:59,399 | INFO     | --- collectZombieJob: --- 10, [2775035]
[2024-05-16 14:28:14] 2024-05-16 12:27:59,399 | INFO     | zombie collector waiting for pid 2775035
[2024-05-16 14:28:14] 2024-05-16 12:27:59,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 14:28:14] 2024-05-16 12:28:00,404 | INFO     | collected zombie processes
[2024-05-16 14:28:14] 2024-05-16 12:28:00,404 | INFO     | will now attempt to kill all subprocesses of pid=2775035
[2024-05-16 14:28:14] 2024-05-16 12:28:00,604 | INFO     | process IDs to be killed: [2775035] (in reverse order)
[2024-05-16 14:28:14] 2024-05-16 12:28:00,739 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 14:28:14] 2024-05-16 12:28:00,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 14:28:14] 2024-05-16 12:28:00,751 | INFO     | did not find any defunct processes belonging to 2775035
[2024-05-16 14:28:14] 2024-05-16 12:28:00,763 | INFO     | did not find any defunct processes belonging to 2775035
[2024-05-16 14:28:14] 2024-05-16 12:28:00,763 | INFO     | ready for new job
[2024-05-16 14:28:14] 2024-05-16 12:28:00,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 14:28:14] 2024-05-16 12:28:00,766 | INFO     | *************************************
[2024-05-16 14:28:14] 2024-05-16 12:28:00,766 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 14:28:14] 2024-05-16 12:28:00,766 | INFO     | *************************************
[2024-05-16 14:28:14] 2024-05-16 12:28:00,766 | INFO     | 
[2024-05-16 14:28:14] 2024-05-16 12:28:00,774 | INFO     | architecture information:
[2024-05-16 14:28:14] 2024-05-16 12:28:00,774 | INFO     | executing command: cat /etc/os-release
[2024-05-16 14:28:14] 2024-05-16 12:28:00,792 | INFO     | cat /etc/os-release:
[2024-05-16 14:28:14] NAME="CentOS Linux"
[2024-05-16 14:28:14] VERSION="7 (Core)"
[2024-05-16 14:28:14] ID="centos"
[2024-05-16 14:28:14] ID_LIKE="rhel fedora"
[2024-05-16 14:28:14] VERSION_ID="7"
[2024-05-16 14:28:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 14:28:14] ANSI_COLOR="0;31"
[2024-05-16 14:28:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 14:28:14] HOME_URL="https://www.centos.org/"
[2024-05-16 14:28:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 14:28:14] 
[2024-05-16 14:28:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 14:28:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 14:28:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 14:28:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 14:28:14] 
[2024-05-16 14:28:14] 2024-05-16 12:28:00,793 | INFO     | *************************************
[2024-05-16 14:28:14] 2024-05-16 12:28:01,295 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/0
[2024-05-16 14:28:14] 2024-05-16 12:28:01,316 | INFO     | sufficient remaining disk space (2980373856256 B)
[2024-05-16 14:28:14] 2024-05-16 12:28:01,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 14:28:14] 2024-05-16 12:28:01,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 14:28:14] 2024-05-16 12:28:01,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 14:28:14] 2024-05-16 12:28:01,419 | INFO     | all job control threads have been joined
[2024-05-16 14:28:14] 2024-05-16 12:28:01,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 14:28:14] 2024-05-16 12:28:01,458 | INFO     | aborting loop
[2024-05-16 14:28:14] 2024-05-16 12:28:01,513 | INFO     | all data control threads have been joined
[2024-05-16 14:28:14] 2024-05-16 12:28:01,766 | INFO     | all payload control threads have been joined
[2024-05-16 14:28:14] 2024-05-16 12:28:02,207 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 14:28:14] 2024-05-16 12:28:02,207 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 14:28:14] 2024-05-16 12:28:02,207 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 14:28:14] 2024-05-16 12:28:02,322 | INFO     | [job] retrieve thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:02,340 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:02,419 | INFO     | [job] validate thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:02,424 | INFO     | [job] control thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:02,445 | INFO     | [payload] failed_post thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:02,463 | INFO     | [job] job monitor thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:02,518 | INFO     | [data] control thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:02,595 | INFO     | [data] copytool_in thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:02,701 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:02,772 | INFO     | [payload] control thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:02,800 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:02,897 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:03,024 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 14:28:14] 2024-05-16 12:28:03,321 | INFO     | [data] copytool_out thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:03,684 | INFO     | [payload] validate_post thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:03,836 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 14:28:14] 2024-05-16 12:28:04,029 | INFO     | [job] queue monitor thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:07,841 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 14:28:14] 2024-05-16 12:28:08,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46983602361408)>', '<ExcThread(monitor, started 46983771510528)>']
[2024-05-16 14:28:14] 2024-05-16 12:28:09,234 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 14:28:14] 2024-05-16 12:28:09,234 | INFO     | [monitor] control thread has ended
[2024-05-16 14:28:14] 2024-05-16 12:28:13,864 | INFO     | all workflow threads have been joined
[2024-05-16 14:28:14] 2024-05-16 12:28:13,865 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 14:28:14] 2024-05-16 12:28:13,865 | INFO     | traces error code: 0
[2024-05-16 14:28:14] 2024-05-16 12:28:13,865 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 14:28:14] 2024-05-16 12:28:13,926 [wrapper] ==== pilot stdout END ====
[2024-05-16 14:28:14] 2024-05-16 12:28:13,928 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 14:28:14] 2024-05-16 12:28:13,930 [wrapper] pilotpid: 2767057
[2024-05-16 14:28:14] 2024-05-16 12:28:13,933 [wrapper] Pilot exit status: 0
[2024-05-16 14:28:14] 2024-05-16 12:28:13,940 [wrapper] pandaids: 6205729715
[2024-05-16 14:28:14] 2024-05-16 12:28:14,020 [wrapper] cleanup: SIGTERM to supervisor_pilot 3881188 2767058
[2024-05-16 14:28:14] 2024-05-16 12:28:14,023 [wrapper] Test setup, not cleaning
[2024-05-16 14:28:14] 2024-05-16 12:28:14,025 [wrapper] ==== wrapper stdout END ====
[2024-05-16 14:28:14] 2024-05-16 12:28:14,028 [wrapper] ==== wrapper stderr END ====
[2024-05-16 14:28:14] 2024-05-16 12:28:14,032 [wrapper] apfmon messages muted
[2024-05-16 14:28:14]  *** Error codes and diagnostics ***
[2024-05-16 14:28:14]     "exeErrorCode": 0,
[2024-05-16 14:28:14]     "exeErrorDiag": "",
[2024-05-16 14:28:14]     "pilotErrorCode": 0,
[2024-05-16 14:28:14]     "pilotErrorDiag": "",
[2024-05-16 14:28:14]  *** Listing of results directory ***
[2024-05-16 14:28:14] total 880836
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc    467845 May 13 07:56 pilot3.tar.gz
[2024-05-16 14:28:14] -rwx------ 1 boinc boinc     32251 May 13 08:07 runpilot2-wrapper.sh
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc      5633 May 13 08:07 queuedata.json
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc       100 May 16 10:44 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 14:28:14] -rwxr-xr-x 1 boinc boinc      7986 May 16 10:44 run_atlas
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc       105 May 16 10:44 job.xml
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc      6644 May 16 10:44 init_data.xml
[2024-05-16 14:28:14] -rw-r--r-- 2 boinc boinc 616560518 May 16 10:44 EVNT.38776140._000004.pool.root.1
[2024-05-16 14:28:14] -rw-r--r-- 2 boinc boinc     17537 May 16 10:44 start_atlas.sh
[2024-05-16 14:28:14] drwxrwx--x 2 boinc boinc      4096 May 16 10:44 shared
[2024-05-16 14:28:14] -rw-r--r-- 2 boinc boinc    479985 May 16 10:44 input.tar.gz
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc         0 May 16 10:44 boinc_lockfile
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc      2610 May 16 10:44 pandaJob.out
[2024-05-16 14:28:14] -rw------- 1 boinc boinc       424 May 16 10:44 setup.sh.local
[2024-05-16 14:28:14] -rw------- 1 boinc boinc   1010257 May 16 10:44 agis_schedconf.cvmfs.json
[2024-05-16 14:28:14] -rw------- 1 boinc boinc   1324701 May 16 10:44 cric_ddmendpoints.json
[2024-05-16 14:28:14] drwx------ 4 boinc boinc      4096 May 16 10:44 pilot3
[2024-05-16 14:28:14] -rw------- 1 boinc boinc        95 May 16 14:27 pilot_heartbeat.json
[2024-05-16 14:28:14] -rw------- 1 boinc boinc 278345363 May 16 14:27 HITS.38776146._000136.pool.root.1
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc       531 May 16 14:27 boinc_task_state.xml
[2024-05-16 14:28:14] -rw------- 1 boinc boinc      1050 May 16 14:27 memory_monitor_summary.json
[2024-05-16 14:28:14] -rw------- 1 boinc boinc         0 May 16 14:27 agis_ddmendpoints.agis.ALL.json
[2024-05-16 14:28:14] -rw------- 1 boinc boinc    337016 May 16 14:27 log.38776146._000136.job.log.tgz.1
[2024-05-16 14:28:14] -rw------- 1 boinc boinc      7711 May 16 14:27 heartbeat.json
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc      8192 May 16 14:28 boinc_mmap_file
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc        28 May 16 14:28 wrapper_checkpoint.txt
[2024-05-16 14:28:14] -rw------- 1 boinc boinc      4223 May 16 14:28 pilotlog.txt
[2024-05-16 14:28:14] -rw------- 1 boinc boinc   1433094 May 16 14:28 log.38776146._000136.job.log.1
[2024-05-16 14:28:14] -rw------- 1 boinc boinc       357 May 16 14:28 output.list
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc       620 May 16 14:28 runtime_log
[2024-05-16 14:28:14] -rw------- 1 boinc boinc   1792000 May 16 14:28 result.tar.gz
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc     11429 May 16 14:28 runtime_log.err
[2024-05-16 14:28:14] -rw------- 1 boinc boinc       659 May 16 14:28 aPhMDm90dQ5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmkJGKDmtZ72An.diag
[2024-05-16 14:28:14] -rw-r--r-- 1 boinc boinc     21358 May 16 14:28 stderr.txt
[2024-05-16 14:28:14] HITS file was successfully produced:
[2024-05-16 14:28:14] -rw------- 1 boinc boinc 278345363 May 16 14:27 shared/HITS.pool.root.1
[2024-05-16 14:28:14]  *** Contents of shared directory: ***
[2024-05-16 14:28:14] total 876188
[2024-05-16 14:28:14] -rw-r--r-- 2 boinc boinc 616560518 May 16 10:44 ATLAS.root_0
[2024-05-16 14:28:14] -rw-r--r-- 2 boinc boinc     17537 May 16 10:44 start_atlas.sh
[2024-05-16 14:28:14] -rw-r--r-- 2 boinc boinc    479985 May 16 10:44 input.tar.gz
[2024-05-16 14:28:14] -rw------- 1 boinc boinc 278345363 May 16 14:27 HITS.pool.root.1
[2024-05-16 14:28:14] -rw------- 1 boinc boinc   1792000 May 16 14:28 result.tar.gz
14:28:16 (2760507): run_atlas exited; CPU time 50097.764318
14:28:16 (2760507): called boinc_finish(0)

</stderr_txt>
]]>

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