Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:13:27 (82793): wrapper (7.7.26015): starting
10:13:27 (82793): wrapper: running run_atlas (--nthreads 4)
[2024-05-19 10:13:27] Arguments: --nthreads 4
[2024-05-19 10:13:27] Threads: 4
[2024-05-19 10:13:27] Checking for CVMFS
[2024-05-19 10:13:27] No cvmfs_config command found, will try listing directly
[2024-05-19 10:13:27] CVMFS is ok
[2024-05-19 10:13:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 10:13:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 10:13:27] Further information can be found at the LHC@home message board.
[2024-05-19 10:13:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 10:13:27] Checking for apptainer binary...
[2024-05-19 10:13:27] which: no apptainer in ((null))
[2024-05-19 10:13:27] apptainer is not installed, using version from CVMFS
[2024-05-19 10:13:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 10:13:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2024-05-19 10:13:28] apptainer works
[2024-05-19 10:13:28] Set ATHENA_PROC_NUMBER=4
[2024-05-19 10:13:28] Set ATHENA_CORE_NUMBER=4
[2024-05-19 10:13:28] Starting ATLAS job with PandaID=6205725034
[2024-05-19 10:13:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 13:48:02]  *** The last 200 lines of the pilot log: ***
[2024-05-19 13:48:02] 2024-05-19 11:47:40,276 | INFO     | fitting pss+swap vs Time
[2024-05-19 13:48:02] 2024-05-19 11:47:40,276 | INFO     | model: linear, x: [1716106441.0, 1716106502.0, 1716106563.0, 1716106624.0, 1716106685.0, 1716106746.0, 1716106807.0, 1716106868.0, 1716106929.0, 1716106990.0, 1716
[2024-05-19 13:48:02] 2024-05-19 11:47:40,276 | INFO     | sum of square deviations: 2912836010.0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,277 | INFO     | sum of deviations: 32418615248.999985
[2024-05-19 13:48:02] 2024-05-19 11:47:40,277 | INFO     | mean x: 1716112846.0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,277 | INFO     | mean y: 2312468.3127962085
[2024-05-19 13:48:02] 2024-05-19 11:47:40,277 | INFO     | -- intersect: -19097287333.167397
[2024-05-19 13:48:02] 2024-05-19 11:47:40,277 | INFO     | intersect: -19097287333.167397
[2024-05-19 13:48:02] 2024-05-19 11:47:40,277 | INFO     | chi2: 4.766110797724834
[2024-05-19 13:48:02] 2024-05-19 11:47:40,277 | INFO     | model: linear, x: [1716106441.0, 1716106502.0, 1716106563.0, 1716106624.0, 1716106685.0, 1716106746.0, 1716106807.0, 1716106868.0, 1716106929.0, 1716106990.0, 1716
[2024-05-19 13:48:02] 2024-05-19 11:47:40,278 | INFO     | sum of square deviations: 2710627567.5
[2024-05-19 13:48:02] 2024-05-19 11:47:40,278 | INFO     | sum of deviations: 44708083857.499985
[2024-05-19 13:48:02] 2024-05-19 11:47:40,278 | INFO     | mean x: 1716112693.5
[2024-05-19 13:48:02] 2024-05-19 11:47:40,278 | INFO     | mean y: 2321549.4029126214
[2024-05-19 13:48:02] 2024-05-19 11:47:40,279 | INFO     | -- intersect: -28302603527.66346
[2024-05-19 13:48:02] 2024-05-19 11:47:40,279 | INFO     | intersect: -28302603527.66346
[2024-05-19 13:48:02] 2024-05-19 11:47:40,279 | INFO     | chi2: 4.0428480664467825
[2024-05-19 13:48:02] 2024-05-19 11:47:40,279 | INFO     | current chi2=4.0428480664467825 (change=15.17511367178687 %)
[2024-05-19 13:48:02] 2024-05-19 11:47:40,279 | INFO     | right removable region: 205
[2024-05-19 13:48:02] 2024-05-19 11:47:40,279 | INFO     | model: linear, x: [1716106746.0, 1716106807.0, 1716106868.0, 1716106929.0, 1716106990.0, 1716107051.0, 1716107112.0, 1716107173.0, 1716107234.0, 1716107295.0, 1716
[2024-05-19 13:48:02] 2024-05-19 11:47:40,279 | INFO     | sum of square deviations: 2710627567.5
[2024-05-19 13:48:02] 2024-05-19 11:47:40,280 | INFO     | sum of deviations: -14427980958.0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,280 | INFO     | mean x: 1716112998.5
[2024-05-19 13:48:02] 2024-05-19 11:47:40,280 | INFO     | mean y: 2347692.9029126214
[2024-05-19 13:48:02] 2024-05-19 11:47:40,280 | INFO     | -- intersect: 9136780604.677053
[2024-05-19 13:48:02] 2024-05-19 11:47:40,280 | INFO     | intersect: 9136780604.677053
[2024-05-19 13:48:02] 2024-05-19 11:47:40,281 | INFO     | chi2: 2.3651588092314597
[2024-05-19 13:48:02] 2024-05-19 11:47:40,281 | INFO     | current chi2=2.3651588092314597 (change=50.37549671819422 %)
[2024-05-19 13:48:02] 2024-05-19 11:47:40,281 | INFO     | model: linear, x: [1716107051.0, 1716107112.0, 1716107173.0, 1716107234.0, 1716107295.0, 1716107356.0, 1716107417.0, 1716107478.0, 1716107539.0, 1716107600.0, 1716
[2024-05-19 13:48:02] 2024-05-19 11:47:40,281 | INFO     | sum of square deviations: 2518000700.0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,282 | INFO     | sum of deviations: -51341062421.0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,282 | INFO     | mean x: 1716113151.0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,282 | INFO     | mean y: 2376919.263681592
[2024-05-19 13:48:02] 2024-05-19 11:47:40,282 | INFO     | -- intersect: 34993261714.089195
[2024-05-19 13:48:02] 2024-05-19 11:47:40,282 | INFO     | intersect: 34993261714.089195
[2024-05-19 13:48:02] 2024-05-19 11:47:40,282 | INFO     | chi2: 0.9710770483999317
[2024-05-19 13:48:02] 2024-05-19 11:47:40,282 | INFO     | current chi2=0.9710770483999317 (change=58.942416694823294 %)
[2024-05-19 13:48:02] 2024-05-19 11:47:40,283 | INFO     | model: linear, x: [1716107356.0, 1716107417.0, 1716107478.0, 1716107539.0, 1716107600.0, 1716107661.0, 1716107722.0, 1716107783.0, 1716107844.0, 1716107905.0, 1716
[2024-05-19 13:48:02] 2024-05-19 11:47:40,283 | INFO     | sum of square deviations: 2334722845.0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,283 | INFO     | sum of deviations: -53655168333.49999
[2024-05-19 13:48:02] 2024-05-19 11:47:40,284 | INFO     | mean x: 1716113303.5
[2024-05-19 13:48:02] 2024-05-19 11:47:40,284 | INFO     | mean y: 2378779.81122449
[2024-05-19 13:48:02] 2024-05-19 11:47:40,284 | INFO     | -- intersect: 39441042078.04578
[2024-05-19 13:48:02] 2024-05-19 11:47:40,284 | INFO     | intersect: 39441042078.04578
[2024-05-19 13:48:02] 2024-05-19 11:47:40,284 | INFO     | chi2: 0.9120996313472179
[2024-05-19 13:48:02] 2024-05-19 11:47:40,284 | INFO     | current chi2=0.9120996313472179 (change=6.073402429796106 %)
[2024-05-19 13:48:02] 2024-05-19 11:47:40,284 | INFO     | left removable region: 30
[2024-05-19 13:48:02] 2024-05-19 11:47:40,284 | INFO     | model: linear, x: [1716108271.0, 1716108332.0, 1716108393.0, 1716108454.0, 1716108515.0, 1716108576.0, 1716108637.0, 1716108698.0, 1716108759.0, 1716108820.0, 1716
[2024-05-19 13:48:02] 2024-05-19 11:47:40,284 | INFO     | sum of square deviations: 1661798600.0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,285 | INFO     | sum of deviations: -26144182698.999992
[2024-05-19 13:48:02] 2024-05-19 11:47:40,285 | INFO     | mean x: 1716113578.0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,285 | INFO     | mean y: 2376809.714285714
[2024-05-19 13:48:02] 2024-05-19 11:47:40,285 | INFO     | -- intersect: 27001067815.631954
[2024-05-19 13:48:02] 2024-05-19 11:47:40,285 | INFO     | intersect: 27001067815.631954
[2024-05-19 13:48:02] 2024-05-19 11:47:40,285 | INFO     | chi2: 0.12401707792627344
[2024-05-19 13:48:02] 2024-05-19 11:47:40,285 | INFO     | -- intersect: 27001067815.631954
[2024-05-19 13:48:02] 2024-05-19 11:47:40,285 | INFO     | current memory leak: -15.73 B/s (using 175 data points, chi2=0.12)
[2024-05-19 13:48:02] 2024-05-19 11:47:40,286 | INFO     | ..............................
[2024-05-19 13:48:02] 2024-05-19 11:47:40,286 | INFO     | . Timing measurements:
[2024-05-19 13:48:02] 2024-05-19 11:47:40,286 | INFO     | . get job = 0 s
[2024-05-19 13:48:02] 2024-05-19 11:47:40,286 | INFO     | . initial setup = 1 s
[2024-05-19 13:48:02] 2024-05-19 11:47:40,286 | INFO     | . payload setup = 4 s
[2024-05-19 13:48:02] 2024-05-19 11:47:40,286 | INFO     | . stage-in = 0 s
[2024-05-19 13:48:02] 2024-05-19 11:47:40,286 | INFO     | . payload execution = 12816 s
[2024-05-19 13:48:02] 2024-05-19 11:47:40,286 | INFO     | . stage-out = 0 s
[2024-05-19 13:48:02] 2024-05-19 11:47:40,286 | INFO     | . log creation = 0 s
[2024-05-19 13:48:02] 2024-05-19 11:47:40,286 | INFO     | ..............................
[2024-05-19 13:48:02] 2024-05-19 11:47:40,420 | WARNING  | process 94168 is no longer using CPU - aborting
[2024-05-19 13:48:02] 2024-05-19 11:47:40,420 | INFO     | aborting job monitoring since job object (job id=6205725034) has expired
[2024-05-19 13:48:02] 2024-05-19 11:47:40,553 | INFO     | 
[2024-05-19 13:48:02] 2024-05-19 11:47:40,554 | INFO     | job summary report
[2024-05-19 13:48:02] 2024-05-19 11:47:40,554 | INFO     | --------------------------------------------------
[2024-05-19 13:48:02] 2024-05-19 11:47:40,554 | INFO     | PanDA job id: 6205725034
[2024-05-19 13:48:02] 2024-05-19 11:47:40,554 | INFO     | task id: 38776125
[2024-05-19 13:48:02] 2024-05-19 11:47:40,554 | INFO     | errors: (none)
[2024-05-19 13:48:02] 2024-05-19 11:47:40,554 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 13:48:02] 2024-05-19 11:47:40,554 | INFO     | pilot state: finished 
[2024-05-19 13:48:02] 2024-05-19 11:47:40,554 | INFO     | transexitcode: 0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,554 | INFO     | exeerrorcode: 0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,554 | INFO     | exeerrordiag: 
[2024-05-19 13:48:02] 2024-05-19 11:47:40,554 | INFO     | exitcode: 0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,555 | INFO     | exitmsg: OK
[2024-05-19 13:48:02] 2024-05-19 11:47:40,555 | INFO     | cpuconsumptiontime: 48603 s
[2024-05-19 13:48:02] 2024-05-19 11:47:40,555 | INFO     | nevents: 400
[2024-05-19 13:48:02] 2024-05-19 11:47:40,555 | INFO     | neventsw: 0
[2024-05-19 13:48:02] 2024-05-19 11:47:40,555 | INFO     | pid: 94168
[2024-05-19 13:48:02] 2024-05-19 11:47:40,555 | INFO     | pgrp: 94168
[2024-05-19 13:48:02] 2024-05-19 11:47:40,555 | INFO     | corecount: 4
[2024-05-19 13:48:02] 2024-05-19 11:47:40,555 | INFO     | event service: False
[2024-05-19 13:48:02] 2024-05-19 11:47:40,555 | INFO     | sizes: {0: 2392033, 1: 2392232, 4: 2392438, 11: 2392466, 12821: 2422407, 12822: 2431389, 12824: 2431573, 12828: 2431743}
[2024-05-19 13:48:02] 2024-05-19 11:47:40,555 | INFO     | --------------------------------------------------
[2024-05-19 13:48:02] 2024-05-19 11:47:40,556 | INFO     | 
[2024-05-19 13:48:02] 2024-05-19 11:47:40,556 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/1
[2024-05-19 13:48:02] 2024-05-19 11:47:40,576 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,576 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,576 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,576 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | job 6205725034 has completed (purged errors)
[2024-05-19 13:48:02] 2024-05-19 11:47:40,577 | INFO     | overall cleanup function is called
[2024-05-19 13:48:02] 2024-05-19 11:47:41,584 | INFO     | --- collectZombieJob: --- 10, [94168]
[2024-05-19 13:48:02] 2024-05-19 11:47:41,584 | INFO     | zombie collector waiting for pid 94168
[2024-05-19 13:48:02] 2024-05-19 11:47:41,584 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 13:48:02] 2024-05-19 11:47:42,589 | INFO     | collected zombie processes
[2024-05-19 13:48:02] 2024-05-19 11:47:42,589 | INFO     | will now attempt to kill all subprocesses of pid=94168
[2024-05-19 13:48:02] 2024-05-19 11:47:42,787 | INFO     | process IDs to be killed: [94168] (in reverse order)
[2024-05-19 13:48:02] 2024-05-19 11:47:42,906 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 13:48:02] 2024-05-19 11:47:42,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 13:48:02] 2024-05-19 11:47:42,914 | INFO     | did not find any defunct processes belonging to 94168
[2024-05-19 13:48:02] 2024-05-19 11:47:42,921 | INFO     | did not find any defunct processes belonging to 94168
[2024-05-19 13:48:02] 2024-05-19 11:47:42,921 | INFO     | ready for new job
[2024-05-19 13:48:02] 2024-05-19 11:47:42,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 13:48:02] 2024-05-19 11:47:42,922 | INFO     | *************************************
[2024-05-19 13:48:02] 2024-05-19 11:47:42,923 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 13:48:02] 2024-05-19 11:47:42,923 | INFO     | *************************************
[2024-05-19 13:48:02] 2024-05-19 11:47:42,923 | INFO     | 
[2024-05-19 13:48:02] 2024-05-19 11:47:42,925 | INFO     | architecture information:
[2024-05-19 13:48:02] 2024-05-19 11:47:42,926 | INFO     | executing command: cat /etc/os-release
[2024-05-19 13:48:02] 2024-05-19 11:47:42,939 | INFO     | cat /etc/os-release:
[2024-05-19 13:48:02] NAME="CentOS Linux"
[2024-05-19 13:48:02] VERSION="7 (Core)"
[2024-05-19 13:48:02] ID="centos"
[2024-05-19 13:48:02] ID_LIKE="rhel fedora"
[2024-05-19 13:48:02] VERSION_ID="7"
[2024-05-19 13:48:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 13:48:02] ANSI_COLOR="0;31"
[2024-05-19 13:48:02] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 13:48:02] HOME_URL="https://www.centos.org/"
[2024-05-19 13:48:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 13:48:02] 
[2024-05-19 13:48:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 13:48:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 13:48:02] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 13:48:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 13:48:02] 
[2024-05-19 13:48:02] 2024-05-19 11:47:42,939 | INFO     | *************************************
[2024-05-19 13:48:02] 2024-05-19 11:47:43,442 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/1
[2024-05-19 13:48:02] 2024-05-19 11:47:43,466 | INFO     | sufficient remaining disk space (568406835200 B)
[2024-05-19 13:48:02] 2024-05-19 11:47:43,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 13:48:02] 2024-05-19 11:47:43,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 13:48:02] 2024-05-19 11:47:43,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 13:48:02] 2024-05-19 11:47:43,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:48:02] 2024-05-19 11:47:43,928 | INFO     | aborting loop
[2024-05-19 13:48:02] 2024-05-19 11:47:43,939 | INFO     | all data control threads have been joined
[2024-05-19 13:48:02] 2024-05-19 11:47:44,104 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 13:48:02] 2024-05-19 11:47:44,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 13:48:02] 2024-05-19 11:47:44,104 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 13:48:02] 2024-05-19 11:47:44,257 | INFO     | all payload control threads have been joined
[2024-05-19 13:48:02] 2024-05-19 11:47:44,471 | INFO     | [job] retrieve thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:44,510 | INFO     | [job] validate thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:44,539 | INFO     | all job control threads have been joined
[2024-05-19 13:48:02] 2024-05-19 11:47:44,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 13:48:02] 2024-05-19 11:47:44,933 | INFO     | [job] job monitor thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:44,944 | INFO     | [data] control thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:44,999 | INFO     | [data] copytool_in thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:45,019 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:45,262 | INFO     | [payload] control thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:45,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:48:02] 2024-05-19 11:47:45,457 | INFO     | [payload] failed_post thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:45,494 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:45,544 | INFO     | [job] control thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:45,619 | INFO     | [payload] validate_post thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:45,839 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:46,357 | INFO     | [job] queue monitor thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:46,890 | INFO     | [data] copytool_out thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:47,472 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:53,691 | INFO     | job.realtimelogging is not enabled
[2024-05-19 13:48:02] 2024-05-19 11:47:54,696 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 13:48:02] 2024-05-19 11:47:56,431 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47681947034688)>', '<ExcThread(monitor, started 47682661910272)>']
[2024-05-19 13:48:02] 2024-05-19 11:47:57,162 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 13:48:02] 2024-05-19 11:47:57,162 | INFO     | [monitor] control thread has ended
[2024-05-19 13:48:02] 2024-05-19 11:48:01,450 | INFO     | all workflow threads have been joined
[2024-05-19 13:48:02] 2024-05-19 11:48:01,450 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 13:48:02] 2024-05-19 11:48:01,451 | INFO     | traces error code: 0
[2024-05-19 13:48:02] 2024-05-19 11:48:01,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 13:48:02] 2024-05-19 11:48:01,545 [wrapper] ==== pilot stdout END ====
[2024-05-19 13:48:02] 2024-05-19 11:48:01,551 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 13:48:02] 2024-05-19 11:48:01,556 [wrapper] pilotpid: 87104
[2024-05-19 13:48:02] 2024-05-19 11:48:01,558 [wrapper] Pilot exit status: 0
[2024-05-19 13:48:02] 2024-05-19 11:48:01,596 [wrapper] pandaids: 6205725034
[2024-05-19 13:48:02] 2024-05-19 11:48:01,710 [wrapper] cleanup: SIGTERM to supervisor_pilot  521811 87105
[2024-05-19 13:48:02] 2024-05-19 11:48:01,737 [wrapper] Test setup, not cleaning
[2024-05-19 13:48:02] 2024-05-19 11:48:01,759 [wrapper] ==== wrapper stdout END ====
[2024-05-19 13:48:02] 2024-05-19 11:48:01,786 [wrapper] ==== wrapper stderr END ====
[2024-05-19 13:48:02] 2024-05-19 11:48:01,847 [wrapper] apfmon messages muted
[2024-05-19 13:48:02]  *** Error codes and diagnostics ***
[2024-05-19 13:48:02]     "exeErrorCode": 0,
[2024-05-19 13:48:02]     "exeErrorDiag": "",
[2024-05-19 13:48:02]     "pilotErrorCode": 0,
[2024-05-19 13:48:02]     "pilotErrorDiag": "",
[2024-05-19 13:48:02]  *** Listing of results directory ***
[2024-05-19 13:48:02] total 827348
[2024-05-19 13:48:02] -rwx------ 1 boinc boinc     32251 May 13 07:56 runpilot2-wrapper.sh
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc    467845 May 13 07:56 pilot3.tar.gz
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc      5633 May 13 08:05 queuedata.json
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc       100 May 19 09:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 13:48:02] -rwxr-xr-x 1 boinc boinc      7986 May 19 09:31 run_atlas
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc       105 May 19 09:31 job.xml
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc      6663 May 19 10:13 init_data.xml
[2024-05-19 13:48:02] -rw-r--r-- 2 boinc boinc 598529458 May 19 10:13 EVNT.38776119._000101.pool.root.1
[2024-05-19 13:48:02] -rw-r--r-- 2 boinc boinc     17537 May 19 10:13 start_atlas.sh
[2024-05-19 13:48:02] drwxrwx--x 2 boinc boinc      4096 May 19 10:13 shared
[2024-05-19 13:48:02] -rw-r--r-- 2 boinc boinc    479999 May 19 10:13 input.tar.gz
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc         0 May 19 10:13 boinc_lockfile
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc      2633 May 19 10:13 pandaJob.out
[2024-05-19 13:48:02] -rw------- 1 boinc boinc       424 May 19 10:13 setup.sh.local
[2024-05-19 13:48:02] -rw------- 1 boinc boinc   1013987 May 19 10:13 agis_schedconf.cvmfs.json
[2024-05-19 13:48:02] -rw------- 1 boinc boinc   1324701 May 19 10:13 cric_ddmendpoints.json
[2024-05-19 13:48:02] drwx------ 4 boinc boinc      4096 May 19 10:13 pilot3
[2024-05-19 13:48:02] -rw------- 1 boinc boinc 241761389 May 19 13:47 HITS.38776125._001482.pool.root.1
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc       531 May 19 13:47 boinc_task_state.xml
[2024-05-19 13:48:02] -rw------- 1 boinc boinc        95 May 19 13:47 pilot_heartbeat.json
[2024-05-19 13:48:02] -rw------- 1 boinc boinc      1051 May 19 13:47 memory_monitor_summary.json
[2024-05-19 13:48:02] -rw------- 1 boinc boinc         0 May 19 13:47 agis_ddmendpoints.agis.ALL.json
[2024-05-19 13:48:02] -rw------- 1 boinc boinc    322452 May 19 13:47 log.38776125._001482.job.log.tgz.1
[2024-05-19 13:48:02] -rw------- 1 boinc boinc      7771 May 19 13:47 heartbeat.json
[2024-05-19 13:48:02] -rw------- 1 boinc boinc      4293 May 19 13:48 pilotlog.txt
[2024-05-19 13:48:02] -rw------- 1 boinc boinc   1370051 May 19 13:48 log.38776125._001482.job.log.1
[2024-05-19 13:48:02] -rw------- 1 boinc boinc       357 May 19 13:48 output.list
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc       620 May 19 13:48 runtime_log
[2024-05-19 13:48:02] -rw------- 1 boinc boinc   1710080 May 19 13:48 result.tar.gz
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc     11410 May 19 13:48 runtime_log.err
[2024-05-19 13:48:02] -rw------- 1 boinc boinc       658 May 19 13:48 TUtLDm9qdQ5n7Olcko1bjSoqABFKDmABFKDmOtvXDmKqWKDmnaQpOm.diag
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc      8192 May 19 13:48 boinc_mmap_file
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc        28 May 19 13:48 wrapper_checkpoint.txt
[2024-05-19 13:48:02] -rw-r--r-- 1 boinc boinc     21310 May 19 13:48 stderr.txt
[2024-05-19 13:48:02] HITS file was successfully produced:
[2024-05-19 13:48:02] -rw------- 1 boinc boinc 241761389 May 19 13:47 shared/HITS.pool.root.1
[2024-05-19 13:48:02]  *** Contents of shared directory: ***
[2024-05-19 13:48:02] total 822772
[2024-05-19 13:48:02] -rw-r--r-- 2 boinc boinc 598529458 May 19 10:13 ATLAS.root_0
[2024-05-19 13:48:02] -rw-r--r-- 2 boinc boinc     17537 May 19 10:13 start_atlas.sh
[2024-05-19 13:48:02] -rw-r--r-- 2 boinc boinc    479999 May 19 10:13 input.tar.gz
[2024-05-19 13:48:02] -rw------- 1 boinc boinc 241761389 May 19 13:47 HITS.pool.root.1
[2024-05-19 13:48:02] -rw------- 1 boinc boinc   1710080 May 19 13:48 result.tar.gz
13:48:04 (82793): run_atlas exited; CPU time 48320.327197
13:48:04 (82793): called boinc_finish(0)

</stderr_txt>
]]>

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