Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:19:41 (4098455): wrapper (7.7.26015): starting
14:19:41 (4098455): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 14:19:41] Arguments: --nthreads 4
[2024-05-15 14:19:41] Threads: 4
[2024-05-15 14:19:41] Checking for CVMFS
[2024-05-15 14:19:41] No cvmfs_config command found, will try listing directly
[2024-05-15 14:19:41] CVMFS is ok
[2024-05-15 14:19:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 14:19:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 14:19:41] Further information can be found at the LHC@home message board.
[2024-05-15 14:19:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 14:19:41] Checking for apptainer binary...
[2024-05-15 14:19:41] which: no apptainer in ((null))
[2024-05-15 14:19:41] apptainer is not installed, using version from CVMFS
[2024-05-15 14:19:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 14:19:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2024-05-15 14:19:42] apptainer works
[2024-05-15 14:19:42] Set ATHENA_PROC_NUMBER=4
[2024-05-15 14:19:42] Set ATHENA_CORE_NUMBER=4
[2024-05-15 14:19:42] Starting ATLAS job with PandaID=6205724978
[2024-05-15 14:19:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 18:03:02]  *** The last 200 lines of the pilot log: ***
[2024-05-15 18:03:02] 2024-05-15 16:02:40,884 | INFO     | intersect: -54317263316.417915
[2024-05-15 18:03:02] 2024-05-15 16:02:40,884 | INFO     | chi2: 4.522339152779982
[2024-05-15 18:03:02] 2024-05-15 16:02:40,884 | INFO     | model: linear, x: [1715775614.0, 1715775675.0, 1715775736.0, 1715775797.0, 1715775858.0, 1715775919.0, 1715775980.0, 1715776041.0, 1715776102.0, 1715776163.0, 1715
[2024-05-15 18:03:02] 2024-05-15 16:02:40,884 | INFO     | sum of square deviations: 3038856977.5
[2024-05-15 18:03:02] 2024-05-15 16:02:40,885 | INFO     | sum of deviations: 100630070659.49998
[2024-05-15 18:03:02] 2024-05-15 16:02:40,885 | INFO     | mean x: 1715782110.5
[2024-05-15 18:03:02] 2024-05-15 16:02:40,885 | INFO     | mean y: 2272387.1822429905
[2024-05-15 18:03:02] 2024-05-15 16:02:40,885 | INFO     | -- intersect: -56814904694.30184
[2024-05-15 18:03:02] 2024-05-15 16:02:40,885 | INFO     | intersect: -56814904694.30184
[2024-05-15 18:03:02] 2024-05-15 16:02:40,886 | INFO     | chi2: 4.522619286344347
[2024-05-15 18:03:02] 2024-05-15 16:02:40,886 | INFO     | current chi2=4.522619286344347 (change=-0.0061944395345217545 %)
[2024-05-15 18:03:02] 2024-05-15 16:02:40,886 | INFO     | right removable region: 213
[2024-05-15 18:03:02] 2024-05-15 16:02:40,886 | INFO     | model: linear, x: [1715775919.0, 1715775980.0, 1715776041.0, 1715776102.0, 1715776163.0, 1715776224.0, 1715776285.0, 1715776346.0, 1715776407.0, 1715776468.0, 1715
[2024-05-15 18:03:02] 2024-05-15 16:02:40,886 | INFO     | sum of square deviations: 3038856977.5
[2024-05-15 18:03:02] 2024-05-15 16:02:40,887 | INFO     | sum of deviations: 51251983541.50001
[2024-05-15 18:03:02] 2024-05-15 16:02:40,887 | INFO     | mean x: 1715782415.5
[2024-05-15 18:03:02] 2024-05-15 16:02:40,887 | INFO     | mean y: 2310306.8457943927
[2024-05-15 18:03:02] 2024-05-15 16:02:40,887 | INFO     | -- intersect: -28935297738.25054
[2024-05-15 18:03:02] 2024-05-15 16:02:40,887 | INFO     | intersect: -28935297738.25054
[2024-05-15 18:03:02] 2024-05-15 16:02:40,887 | INFO     | chi2: 1.8836138928594313
[2024-05-15 18:03:02] 2024-05-15 16:02:40,887 | INFO     | current chi2=1.8836138928594313 (change=58.348681307956916 %)
[2024-05-15 18:03:02] 2024-05-15 16:02:40,887 | INFO     | model: linear, x: [1715776224.0, 1715776285.0, 1715776346.0, 1715776407.0, 1715776468.0, 1715776529.0, 1715776590.0, 1715776651.0, 1715776712.0, 1715776773.0, 1715
[2024-05-15 18:03:02] 2024-05-15 16:02:40,887 | INFO     | sum of square deviations: 2830787960.0
[2024-05-15 18:03:02] 2024-05-15 16:02:40,888 | INFO     | sum of deviations: 10487594579.999998
[2024-05-15 18:03:02] 2024-05-15 16:02:40,888 | INFO     | mean x: 1715782568.0
[2024-05-15 18:03:02] 2024-05-15 16:02:40,888 | INFO     | mean y: 2340189.009569378
[2024-05-15 18:03:02] 2024-05-15 16:02:40,888 | INFO     | -- intersect: -6354346434.956176
[2024-05-15 18:03:02] 2024-05-15 16:02:40,888 | INFO     | intersect: -6354346434.956176
[2024-05-15 18:03:02] 2024-05-15 16:02:40,889 | INFO     | chi2: 0.37937039170867637
[2024-05-15 18:03:02] 2024-05-15 16:02:40,889 | INFO     | current chi2=0.37937039170867637 (change=79.85943971071634 %)
[2024-05-15 18:03:02] 2024-05-15 16:02:40,889 | INFO     | model: linear, x: [1715776529.0, 1715776590.0, 1715776651.0, 1715776712.0, 1715776773.0, 1715776834.0, 1715776895.0, 1715776956.0, 1715777017.0, 1715777078.0, 1715
[2024-05-15 18:03:02] 2024-05-15 16:02:40,889 | INFO     | sum of square deviations: 2632440055.0
[2024-05-15 18:03:02] 2024-05-15 16:02:40,890 | INFO     | sum of deviations: -3658400396.9999995
[2024-05-15 18:03:02] 2024-05-15 16:02:40,890 | INFO     | mean x: 1715782720.5
[2024-05-15 18:03:02] 2024-05-15 16:02:40,890 | INFO     | mean y: 2350927.9607843137
[2024-05-15 18:03:02] 2024-05-15 16:02:40,890 | INFO     | -- intersect: 2386838344.462635
[2024-05-15 18:03:02] 2024-05-15 16:02:40,890 | INFO     | intersect: 2386838344.462635
[2024-05-15 18:03:02] 2024-05-15 16:02:40,890 | INFO     | chi2: 0.0036478313009665345
[2024-05-15 18:03:02] 2024-05-15 16:02:40,890 | INFO     | current chi2=0.0036478313009665345 (change=99.03845123902876 %)
[2024-05-15 18:03:02] 2024-05-15 16:02:40,890 | INFO     | model: linear, x: [1715776834.0, 1715776895.0, 1715776956.0, 1715777017.0, 1715777078.0, 1715777139.0, 1715777200.0, 1715777261.0, 1715777322.0, 1715777383.0, 1715
[2024-05-15 18:03:02] 2024-05-15 16:02:40,890 | INFO     | sum of square deviations: 2443580700.0
[2024-05-15 18:03:02] 2024-05-15 16:02:40,891 | INFO     | sum of deviations: -3897126154.000002
[2024-05-15 18:03:02] 2024-05-15 16:02:40,891 | INFO     | mean x: 1715782873.0
[2024-05-15 18:03:02] 2024-05-15 16:02:40,891 | INFO     | mean y: 2351119.0251256283
[2024-05-15 18:03:02] 2024-05-15 16:02:40,891 | INFO     | -- intersect: 2738754426.2511005
[2024-05-15 18:03:02] 2024-05-15 16:02:40,891 | INFO     | intersect: 2738754426.2511005
[2024-05-15 18:03:02] 2024-05-15 16:02:40,891 | INFO     | chi2: 0.003364154981121029
[2024-05-15 18:03:02] 2024-05-15 16:02:40,891 | INFO     | current chi2=0.003364154981121029 (change=7.7765745299225415 %)
[2024-05-15 18:03:02] 2024-05-15 16:02:40,891 | INFO     | left removable region: 40
[2024-05-15 18:03:02] 2024-05-15 16:02:40,891 | INFO     | model: linear, x: [1715778054.0, 1715778115.0, 1715778176.0, 1715778237.0, 1715778298.0, 1715778359.0, 1715778420.0, 1715778481.0, 1715778542.0, 1715778603.0, 1715
[2024-05-15 18:03:02] 2024-05-15 16:02:40,892 | INFO     | sum of square deviations: 1605470102.0
[2024-05-15 18:03:02] 2024-05-15 16:02:40,892 | INFO     | sum of deviations: -1277035122.0000012
[2024-05-15 18:03:02] 2024-05-15 16:02:40,892 | INFO     | mean x: 1715783300.0
[2024-05-15 18:03:02] 2024-05-15 16:02:40,892 | INFO     | mean y: 2348705.670520231
[2024-05-15 18:03:02] 2024-05-15 16:02:40,892 | INFO     | -- intersect: 1367129982.575959
[2024-05-15 18:03:02] 2024-05-15 16:02:40,892 | INFO     | intersect: 1367129982.575959
[2024-05-15 18:03:02] 2024-05-15 16:02:40,892 | INFO     | chi2: 0.002289606188288308
[2024-05-15 18:03:02] 2024-05-15 16:02:40,892 | INFO     | -- intersect: 1367129982.575959
[2024-05-15 18:03:02] 2024-05-15 16:02:40,893 | INFO     | current memory leak: -0.80 B/s (using 173 data points, chi2=0.00)
[2024-05-15 18:03:02] 2024-05-15 16:02:40,893 | INFO     | ..............................
[2024-05-15 18:03:02] 2024-05-15 16:02:40,893 | INFO     | . Timing measurements:
[2024-05-15 18:03:02] 2024-05-15 16:02:40,893 | INFO     | . get job = 0 s
[2024-05-15 18:03:02] 2024-05-15 16:02:40,893 | INFO     | . initial setup = 1 s
[2024-05-15 18:03:02] 2024-05-15 16:02:40,893 | INFO     | . payload setup = 4 s
[2024-05-15 18:03:02] 2024-05-15 16:02:40,893 | INFO     | . stage-in = 0 s
[2024-05-15 18:03:02] 2024-05-15 16:02:40,893 | INFO     | . payload execution = 13341 s
[2024-05-15 18:03:02] 2024-05-15 16:02:40,893 | INFO     | . stage-out = 0 s
[2024-05-15 18:03:02] 2024-05-15 16:02:40,893 | INFO     | . log creation = 0 s
[2024-05-15 18:03:02] 2024-05-15 16:02:40,893 | INFO     | ..............................
[2024-05-15 18:03:02] 2024-05-15 16:02:40,950 | INFO     | 
[2024-05-15 18:03:02] 2024-05-15 16:02:40,950 | INFO     | job summary report
[2024-05-15 18:03:02] 2024-05-15 16:02:40,950 | INFO     | --------------------------------------------------
[2024-05-15 18:03:02] 2024-05-15 16:02:40,950 | INFO     | PanDA job id: 6205724978
[2024-05-15 18:03:02] 2024-05-15 16:02:40,950 | INFO     | task id: 38776125
[2024-05-15 18:03:02] 2024-05-15 16:02:40,950 | INFO     | errors: (none)
[2024-05-15 18:03:02] 2024-05-15 16:02:40,950 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 18:03:02] 2024-05-15 16:02:40,950 | INFO     | pilot state: finished 
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | transexitcode: 0
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | exeerrorcode: 0
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | exeerrordiag: 
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | exitcode: 0
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | exitmsg: OK
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | cpuconsumptiontime: 50232 s
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | nevents: 400
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | neventsw: 0
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | pid: 4110080
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | pgrp: 4110080
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | corecount: 4
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | event service: False
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | sizes: {0: 2396652, 3: 2396858, 11: 2396886, 13349: 2427029, 13350: 2436011, 13351: 2436067, 13356: 2436365}
[2024-05-15 18:03:02] 2024-05-15 16:02:40,951 | INFO     | --------------------------------------------------
[2024-05-15 18:03:02] 2024-05-15 16:02:40,952 | INFO     | 
[2024-05-15 18:03:02] 2024-05-15 16:02:40,952 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/1
[2024-05-15 18:03:02] 2024-05-15 16:02:40,972 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,973 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,974 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 18:03:02] 2024-05-15 16:02:40,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,974 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 18:03:02] 2024-05-15 16:02:40,974 | INFO     | job 6205724978 has completed (purged errors)
[2024-05-15 18:03:02] 2024-05-15 16:02:40,974 | INFO     | overall cleanup function is called
[2024-05-15 18:03:02] 2024-05-15 16:02:41,981 | INFO     | --- collectZombieJob: --- 10, [4110080]
[2024-05-15 18:03:02] 2024-05-15 16:02:41,982 | INFO     | zombie collector waiting for pid 4110080
[2024-05-15 18:03:02] 2024-05-15 16:02:41,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 18:03:02] 2024-05-15 16:02:42,986 | INFO     | collected zombie processes
[2024-05-15 18:03:02] 2024-05-15 16:02:42,987 | INFO     | will now attempt to kill all subprocesses of pid=4110080
[2024-05-15 18:03:02] 2024-05-15 16:02:43,141 | INFO     | process IDs to be killed: [4110080] (in reverse order)
[2024-05-15 18:03:02] 2024-05-15 16:02:43,252 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 18:03:02] 2024-05-15 16:02:43,253 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 18:03:02] 2024-05-15 16:02:43,263 | INFO     | did not find any defunct processes belonging to 4110080
[2024-05-15 18:03:02] 2024-05-15 16:02:43,273 | INFO     | did not find any defunct processes belonging to 4110080
[2024-05-15 18:03:02] 2024-05-15 16:02:43,273 | INFO     | ready for new job
[2024-05-15 18:03:02] 2024-05-15 16:02:43,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 18:03:02] 2024-05-15 16:02:43,275 | INFO     | *************************************
[2024-05-15 18:03:02] 2024-05-15 16:02:43,276 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 18:03:02] 2024-05-15 16:02:43,276 | INFO     | *************************************
[2024-05-15 18:03:02] 2024-05-15 16:02:43,276 | INFO     | 
[2024-05-15 18:03:02] 2024-05-15 16:02:43,280 | INFO     | architecture information:
[2024-05-15 18:03:02] 2024-05-15 16:02:43,280 | INFO     | executing command: cat /etc/os-release
[2024-05-15 18:03:02] 2024-05-15 16:02:43,296 | INFO     | cat /etc/os-release:
[2024-05-15 18:03:02] NAME="CentOS Linux"
[2024-05-15 18:03:02] VERSION="7 (Core)"
[2024-05-15 18:03:02] ID="centos"
[2024-05-15 18:03:02] ID_LIKE="rhel fedora"
[2024-05-15 18:03:02] VERSION_ID="7"
[2024-05-15 18:03:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 18:03:02] ANSI_COLOR="0;31"
[2024-05-15 18:03:02] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 18:03:02] HOME_URL="https://www.centos.org/"
[2024-05-15 18:03:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 18:03:02] 
[2024-05-15 18:03:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 18:03:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 18:03:02] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 18:03:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 18:03:02] 
[2024-05-15 18:03:02] 2024-05-15 16:02:43,296 | INFO     | *************************************
[2024-05-15 18:03:02] 2024-05-15 16:02:43,799 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/1
[2024-05-15 18:03:02] 2024-05-15 16:02:43,816 | INFO     | sufficient remaining disk space (586594385920 B)
[2024-05-15 18:03:02] 2024-05-15 16:02:43,816 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 18:03:02] 2024-05-15 16:02:43,817 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 18:03:02] 2024-05-15 16:02:43,817 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 18:03:02] 2024-05-15 16:02:43,817 | INFO     | aborting loop
[2024-05-15 18:03:02] 2024-05-15 16:02:43,850 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 18:03:02] 2024-05-15 16:02:43,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 18:03:02] 2024-05-15 16:02:43,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 18:03:02] 2024-05-15 16:02:43,957 | INFO     | all data control threads have been joined
[2024-05-15 18:03:02] 2024-05-15 16:02:44,822 | INFO     | [job] retrieve thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:44,823 | INFO     | [job] job monitor thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:44,955 | INFO     | [job] validate thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:44,963 | INFO     | [data] control thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:45,129 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:45,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 18:03:02] 2024-05-15 16:02:45,236 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:45,259 | INFO     | all payload control threads have been joined
[2024-05-15 18:03:02] 2024-05-15 16:02:45,358 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:45,402 | INFO     | all job control threads have been joined
[2024-05-15 18:03:02] 2024-05-15 16:02:45,774 | INFO     | [data] copytool_in thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:45,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 18:03:02] 2024-05-15 16:02:46,030 | INFO     | [payload] validate_post thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:46,265 | INFO     | [payload] control thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:46,382 | INFO     | [payload] failed_post thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:46,408 | INFO     | [job] control thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:46,965 | INFO     | [job] queue monitor thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:46,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 18:03:02] 2024-05-15 16:02:47,182 | INFO     | [data] copytool_out thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:50,989 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:54,033 | INFO     | job.realtimelogging is not enabled
[2024-05-15 18:03:02] 2024-05-15 16:02:55,037 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 18:03:02] 2024-05-15 16:02:55,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47351139083328)>', '<ExcThread(monitor, started 47351310333696)>']
[2024-05-15 18:03:02] 2024-05-15 16:02:56,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 18:03:02] 2024-05-15 16:02:56,911 | INFO     | [monitor] control thread has ended
[2024-05-15 18:03:02] 2024-05-15 16:03:00,945 | INFO     | all workflow threads have been joined
[2024-05-15 18:03:02] 2024-05-15 16:03:00,945 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 18:03:02] 2024-05-15 16:03:00,946 | INFO     | traces error code: 0
[2024-05-15 18:03:02] 2024-05-15 16:03:00,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 18:03:02] 2024-05-15 16:03:01,049 [wrapper] ==== pilot stdout END ====
[2024-05-15 18:03:02] 2024-05-15 16:03:01,052 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 18:03:02] 2024-05-15 16:03:01,054 [wrapper] pilotpid: 4102801
[2024-05-15 18:03:02] 2024-05-15 16:03:01,056 [wrapper] Pilot exit status: 0
[2024-05-15 18:03:02] 2024-05-15 16:03:01,064 [wrapper] pandaids: 6205724978
[2024-05-15 18:03:02] 2024-05-15 16:03:01,149 [wrapper] cleanup: SIGTERM to supervisor_pilot  450637 4102802
[2024-05-15 18:03:02] 2024-05-15 16:03:01,152 [wrapper] Test setup, not cleaning
[2024-05-15 18:03:02] 2024-05-15 16:03:01,154 [wrapper] ==== wrapper stdout END ====
[2024-05-15 18:03:02] 2024-05-15 16:03:01,156 [wrapper] ==== wrapper stderr END ====
[2024-05-15 18:03:02] 2024-05-15 16:03:01,161 [wrapper] apfmon messages muted
[2024-05-15 18:03:02]  *** Error codes and diagnostics ***
[2024-05-15 18:03:02]     "exeErrorCode": 0,
[2024-05-15 18:03:02]     "exeErrorDiag": "",
[2024-05-15 18:03:02]     "pilotErrorCode": 0,
[2024-05-15 18:03:02]     "pilotErrorDiag": "",
[2024-05-15 18:03:02]  *** Listing of results directory ***
[2024-05-15 18:03:02] total 825680
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc    467845 May 13 07:47 pilot3.tar.gz
[2024-05-15 18:03:02] -rwx------ 1 boinc boinc     32251 May 13 07:56 runpilot2-wrapper.sh
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc      5633 May 13 07:56 queuedata.json
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc       100 May 15 13:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 18:03:02] -rwxr-xr-x 1 boinc boinc      7986 May 15 13:28 run_atlas
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc       105 May 15 13:28 job.xml
[2024-05-15 18:03:02] -rw-r--r-- 2 boinc boinc 597302240 May 15 14:19 EVNT.38776119._000098.pool.root.1
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc      6663 May 15 14:19 init_data.xml
[2024-05-15 18:03:02] -rw-r--r-- 2 boinc boinc     17537 May 15 14:19 start_atlas.sh
[2024-05-15 18:03:02] drwxrwx--x 2 boinc boinc      4096 May 15 14:19 shared
[2024-05-15 18:03:02] -rw-r--r-- 2 boinc boinc    480010 May 15 14:19 input.tar.gz
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc         0 May 15 14:19 boinc_lockfile
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc      2633 May 15 14:19 pandaJob.out
[2024-05-15 18:03:02] -rw------- 1 boinc boinc       424 May 15 14:19 setup.sh.local
[2024-05-15 18:03:02] -rw------- 1 boinc boinc   1010553 May 15 14:19 agis_schedconf.cvmfs.json
[2024-05-15 18:03:02] -rw------- 1 boinc boinc   1325758 May 15 14:19 cric_ddmendpoints.json
[2024-05-15 18:03:02] drwx------ 4 boinc boinc      4096 May 15 14:19 pilot3
[2024-05-15 18:03:02] -rw------- 1 boinc boinc 241104380 May 15 18:02 HITS.38776125._001428.pool.root.1
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc       531 May 15 18:02 boinc_task_state.xml
[2024-05-15 18:03:02] -rw------- 1 boinc boinc        95 May 15 18:02 pilot_heartbeat.json
[2024-05-15 18:03:02] -rw------- 1 boinc boinc      1049 May 15 18:02 memory_monitor_summary.json
[2024-05-15 18:03:02] -rw------- 1 boinc boinc         0 May 15 18:02 agis_ddmendpoints.agis.ALL.json
[2024-05-15 18:03:02] -rw------- 1 boinc boinc    350167 May 15 18:02 log.38776125._001428.job.log.tgz.1
[2024-05-15 18:03:02] -rw------- 1 boinc boinc      7763 May 15 18:02 heartbeat.json
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc      8192 May 15 18:02 boinc_mmap_file
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc        28 May 15 18:02 wrapper_checkpoint.txt
[2024-05-15 18:03:02] -rw------- 1 boinc boinc      4293 May 15 18:03 pilotlog.txt
[2024-05-15 18:03:02] -rw------- 1 boinc boinc   1429724 May 15 18:03 log.38776125._001428.job.log.1
[2024-05-15 18:03:02] -rw------- 1 boinc boinc       357 May 15 18:03 output.list
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc       620 May 15 18:03 runtime_log
[2024-05-15 18:03:02] -rw------- 1 boinc boinc   1802240 May 15 18:03 result.tar.gz
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc     11410 May 15 18:03 runtime_log.err
[2024-05-15 18:03:02] -rw------- 1 boinc boinc       657 May 15 18:03 cmBMDm2qdQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDm1TJKDmm7pXSn.diag
[2024-05-15 18:03:02] -rw-r--r-- 1 boinc boinc     21316 May 15 18:03 stderr.txt
[2024-05-15 18:03:02] HITS file was successfully produced:
[2024-05-15 18:03:02] -rw------- 1 boinc boinc 241104380 May 15 18:02 shared/HITS.pool.root.1
[2024-05-15 18:03:02]  *** Contents of shared directory: ***
[2024-05-15 18:03:02] total 821020
[2024-05-15 18:03:02] -rw-r--r-- 2 boinc boinc 597302240 May 15 14:19 ATLAS.root_0
[2024-05-15 18:03:02] -rw-r--r-- 2 boinc boinc     17537 May 15 14:19 start_atlas.sh
[2024-05-15 18:03:02] -rw-r--r-- 2 boinc boinc    480010 May 15 14:19 input.tar.gz
[2024-05-15 18:03:02] -rw------- 1 boinc boinc 241104380 May 15 18:02 HITS.pool.root.1
[2024-05-15 18:03:02] -rw------- 1 boinc boinc   1802240 May 15 18:03 result.tar.gz
18:03:04 (4098455): run_atlas exited; CPU time 49953.309909
18:03:04 (4098455): called boinc_finish(0)

</stderr_txt>
]]>

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