Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
07:54:10 (157274): wrapper (7.7.26015): starting
07:54:10 (157274): wrapper: running run_atlas (--nthreads 12)
[2024-05-15 07:54:10] Arguments: --nthreads 12
[2024-05-15 07:54:10] Threads: 12
[2024-05-15 07:54:10] Checking for CVMFS
[2024-05-15 07:54:10] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-15 07:54:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-15 07:54:10] Running cvmfs_config stat atlas.cern.ch
[2024-05-15 07:54:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-15 07:54:10] 2.10.1.0 2766 169574 173276 132763 3 345 38361496 45568001 9240 130560 0 576436508 99.769 357808373 12348 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-15 07:54:10] CVMFS is ok
[2024-05-15 07:54:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 07:54:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 07:54:10] Further information can be found at the LHC@home message board.
[2024-05-15 07:54:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 07:54:10] Checking for apptainer binary...
[2024-05-15 07:54:10] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-15 07:54:10] Running /usr/bin/apptainer --version
[2024-05-15 07:54:10] apptainer version 1.1.8-1.el7
[2024-05-15 07:54:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 07:54:11] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0085.triumf.lcg
[2024-05-15 07:54:11] apptainer works
[2024-05-15 07:54:11] Set ATHENA_PROC_NUMBER=12
[2024-05-15 07:54:11] Set ATHENA_CORE_NUMBER=12
[2024-05-15 07:54:11] Starting ATLAS job with PandaID=6205655054
[2024-05-15 07:54:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 09:43:01]  *** The last 200 lines of the pilot log: ***
[2024-05-15 09:43:01] 2024-05-15 16:42:38,421 | INFO     | model: linear, x: [1715785493.0, 1715785554.0, 1715785615.0, 1715785676.0, 1715785737.0, 1715785798.0, 1715785859.0, 1715785920.0, 1715785981.0, 1715786042.0, 1715
[2024-05-15 09:43:01] 2024-05-15 16:42:38,421 | INFO     | sum of square deviations: 274313527.73958343
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | sum of deviations: 14880320684.177086
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | mean x: 1715788390.5520833
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | mean y: 2695139.8645833335
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | -- intersect: -93071393068.5781
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | intersect: -93071393068.5781
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | chi2: 0.849152698410977
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | current chi2=0.849152698410977 (change=65.74559805756856 %)
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | model: linear, x: [1715785798.0, 1715785859.0, 1715785920.0, 1715785981.0, 1715786042.0, 1715786103.0, 1715786164.0, 1715786225.0, 1715786286.0, 1715786347.0, 1715
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | sum of square deviations: 233641472.7252742
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | sum of deviations: 463483150.82417554
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | mean x: 1715788543.054945
[2024-05-15 09:43:01] 2024-05-15 16:42:38,422 | INFO     | mean y: 2748458.835164835
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | -- intersect: -3400924146.0632133
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | intersect: -3400924146.0632133
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | chi2: 0.006972614349752921
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | current chi2=0.006972614349752921 (change=99.17887391009876 %)
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | model: linear, x: [1715786103.0, 1715786164.0, 1715786225.0, 1715786286.0, 1715786347.0, 1715786408.0, 1715786469.0, 1715786531.0, 1715786591.0, 1715786652.0, 1715
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | sum of square deviations: 197202055.20930234
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | sum of deviations: 762263543.4883722
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | mean x: 1715788695.5581396
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | mean y: 2747126.302325581
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | -- intersect: -6629451354.414849
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | intersect: -6629451354.414849
[2024-05-15 09:43:01] 2024-05-15 16:42:38,423 | INFO     | chi2: 0.00486836251729379
[2024-05-15 09:43:01] 2024-05-15 16:42:38,424 | INFO     | current chi2=0.00486836251729379 (change=30.17880707160718 %)
[2024-05-15 09:43:01] 2024-05-15 16:42:38,424 | INFO     | model: linear, x: [1715786408.0, 1715786469.0, 1715786531.0, 1715786591.0, 1715786652.0, 1715786713.0, 1715786774.0, 1715786835.0, 1715786896.0, 1715786957.0, 1715
[2024-05-15 09:43:01] 2024-05-15 16:42:38,424 | INFO     | sum of square deviations: 164762712.69135806
[2024-05-15 09:43:01] 2024-05-15 16:42:38,424 | INFO     | sum of deviations: 1215788125.839506
[2024-05-15 09:43:01] 2024-05-15 16:42:38,424 | INFO     | mean x: 1715788848.0617285
[2024-05-15 09:43:01] 2024-05-15 16:42:38,424 | INFO     | mean y: 2745098.4320987654
[2024-05-15 09:43:01] 2024-05-15 16:42:38,424 | INFO     | -- intersect: -12658103183.599787
[2024-05-15 09:43:01] 2024-05-15 16:42:38,424 | INFO     | intersect: -12658103183.599787
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | chi2: 0.0005622931212946582
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | current chi2=0.0005622931212946582 (change=88.45005647592521 %)
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | model: linear, x: [1715786713.0, 1715786774.0, 1715786835.0, 1715786896.0, 1715786957.0, 1715787018.0, 1715787079.0, 1715787140.0, 1715787201.0, 1715787262.0, 1715
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | sum of square deviations: 136095822.78947344
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | sum of deviations: 866158235.6052632
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | mean x: 1715789000.5526316
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | mean y: 2746960.2236842103
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | -- intersect: -10917094243.782276
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | intersect: -10917094243.782276
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | chi2: 0.00045410713218392725
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | current chi2=0.00045410713218392725 (change=19.240140953820823 %)
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | left removable region: 60
[2024-05-15 09:43:01] 2024-05-15 16:42:38,425 | INFO     | model: linear, x: [1715788543.0, 1715788604.0, 1715788666.0, 1715788726.0, 1715788787.0, 1715788848.0, 1715788909.0, 1715788970.0, 1715789031.0, 1715789092.0, 1715
[2024-05-15 09:43:01] 2024-05-15 16:42:38,426 | INFO     | sum of square deviations: 19830675.775000013
[2024-05-15 09:43:01] 2024-05-15 16:42:38,426 | INFO     | sum of deviations: 8731238.450000003
[2024-05-15 09:43:01] 2024-05-15 16:42:38,426 | INFO     | mean x: 1715789732.575
[2024-05-15 09:43:01] 2024-05-15 16:42:38,426 | INFO     | mean y: 2752522.85
[2024-05-15 09:43:01] 2024-05-15 16:42:38,426 | INFO     | -- intersect: -752691691.7168156
[2024-05-15 09:43:01] 2024-05-15 16:42:38,426 | INFO     | intersect: -752691691.7168156
[2024-05-15 09:43:01] 2024-05-15 16:42:38,426 | INFO     | chi2: 2.004483554372912e-05
[2024-05-15 09:43:01] 2024-05-15 16:42:38,426 | INFO     | -- intersect: -752691691.7168156
[2024-05-15 09:43:01] 2024-05-15 16:42:38,426 | INFO     | current memory leak: 0.44 B/s (using 40 data points, chi2=0.00)
[2024-05-15 09:43:01] 2024-05-15 16:42:38,426 | INFO     | ..............................
[2024-05-15 09:43:01] 2024-05-15 16:42:38,430 | INFO     | . Timing measurements:
[2024-05-15 09:43:01] 2024-05-15 16:42:38,430 | INFO     | . get job = 0 s
[2024-05-15 09:43:01] 2024-05-15 16:42:38,430 | INFO     | . initial setup = 2 s
[2024-05-15 09:43:01] 2024-05-15 16:42:38,430 | INFO     | . payload setup = 4 s
[2024-05-15 09:43:01] 2024-05-15 16:42:38,430 | INFO     | . stage-in = 0 s
[2024-05-15 09:43:01] 2024-05-15 16:42:38,430 | INFO     | . payload execution = 6467 s
[2024-05-15 09:43:01] 2024-05-15 16:42:38,430 | INFO     | . stage-out = 0 s
[2024-05-15 09:43:01] 2024-05-15 16:42:38,430 | INFO     | . log creation = 0 s
[2024-05-15 09:43:01] 2024-05-15 16:42:38,430 | INFO     | ..............................
[2024-05-15 09:43:01] 2024-05-15 16:42:38,499 | WARNING  | process 167885 is no longer using CPU - aborting
[2024-05-15 09:43:01] 2024-05-15 16:42:38,499 | INFO     | aborting job monitoring since job object (job id=6205655054) has expired
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | 
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | job summary report
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | --------------------------------------------------
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | PanDA job id: 6205655054
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | task id: 38776125
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | errors: (none)
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | pilot state: finished 
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | transexitcode: 0
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | exeerrorcode: 0
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | exeerrordiag: 
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | exitcode: 0
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | exitmsg: OK
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | cpuconsumptiontime: 34152 s
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | nevents: 400
[2024-05-15 09:43:01] 2024-05-15 16:42:38,751 | INFO     | neventsw: 0
[2024-05-15 09:43:01] 2024-05-15 16:42:38,752 | INFO     | pid: 167885
[2024-05-15 09:43:01] 2024-05-15 16:42:38,752 | INFO     | pgrp: 167885
[2024-05-15 09:43:01] 2024-05-15 16:42:38,752 | INFO     | corecount: 12
[2024-05-15 09:43:01] 2024-05-15 16:42:38,752 | INFO     | event service: False
[2024-05-15 09:43:01] 2024-05-15 16:42:38,752 | INFO     | sizes: {0: 2396461, 1: 2396660, 4: 2396866, 11: 2396894, 6472: 2423832, 6473: 2432786, 6477: 2432970, 6483: 2433140}
[2024-05-15 09:43:01] 2024-05-15 16:42:38,752 | INFO     | --------------------------------------------------
[2024-05-15 09:43:01] 2024-05-15 16:42:38,752 | INFO     | 
[2024-05-15 09:43:01] 2024-05-15 16:42:38,752 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-15 09:43:01] 2024-05-15 16:42:38,774 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,774 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 09:43:01] 2024-05-15 16:42:38,775 | INFO     | job 6205655054 has completed (purged errors)
[2024-05-15 09:43:01] 2024-05-15 16:42:38,776 | INFO     | overall cleanup function is called
[2024-05-15 09:43:01] 2024-05-15 16:42:39,783 | INFO     | --- collectZombieJob: --- 10, [167885]
[2024-05-15 09:43:01] 2024-05-15 16:42:39,783 | INFO     | zombie collector waiting for pid 167885
[2024-05-15 09:43:01] 2024-05-15 16:42:39,783 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 09:43:01] 2024-05-15 16:42:40,788 | INFO     | collected zombie processes
[2024-05-15 09:43:01] 2024-05-15 16:42:40,788 | INFO     | will now attempt to kill all subprocesses of pid=167885
[2024-05-15 09:43:01] 2024-05-15 16:42:40,889 | INFO     | process IDs to be killed: [167885] (in reverse order)
[2024-05-15 09:43:01] 2024-05-15 16:42:40,972 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 09:43:01] 2024-05-15 16:42:40,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 09:43:01] 2024-05-15 16:42:40,976 | INFO     | did not find any defunct processes belonging to 167885
[2024-05-15 09:43:01] 2024-05-15 16:42:40,980 | INFO     | did not find any defunct processes belonging to 167885
[2024-05-15 09:43:01] 2024-05-15 16:42:40,981 | INFO     | ready for new job
[2024-05-15 09:43:01] 2024-05-15 16:42:40,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 09:43:01] 2024-05-15 16:42:40,982 | INFO     | *************************************
[2024-05-15 09:43:01] 2024-05-15 16:42:40,982 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-15 09:43:01] 2024-05-15 16:42:40,982 | INFO     | *************************************
[2024-05-15 09:43:01] 2024-05-15 16:42:40,982 | INFO     | 
[2024-05-15 09:43:01] 2024-05-15 16:42:40,985 | INFO     | architecture information:
[2024-05-15 09:43:01] 2024-05-15 16:42:40,985 | INFO     | executing command: cat /etc/os-release
[2024-05-15 09:43:01] 2024-05-15 16:42:41,008 | INFO     | cat /etc/os-release:
[2024-05-15 09:43:01] NAME="CentOS Linux"
[2024-05-15 09:43:01] VERSION="7 (Core)"
[2024-05-15 09:43:01] ID="centos"
[2024-05-15 09:43:01] ID_LIKE="rhel fedora"
[2024-05-15 09:43:01] VERSION_ID="7"
[2024-05-15 09:43:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 09:43:01] ANSI_COLOR="0;31"
[2024-05-15 09:43:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 09:43:01] HOME_URL="https://www.centos.org/"
[2024-05-15 09:43:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 09:43:01] 
[2024-05-15 09:43:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 09:43:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 09:43:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 09:43:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 09:43:01] 
[2024-05-15 09:43:01] 2024-05-15 16:42:41,008 | INFO     | *************************************
[2024-05-15 09:43:01] 2024-05-15 16:42:41,514 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-15 09:43:01] 2024-05-15 16:42:41,564 | INFO     | sufficient remaining disk space (1814427598848 B)
[2024-05-15 09:43:01] 2024-05-15 16:42:41,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 09:43:01] 2024-05-15 16:42:41,564 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 09:43:01] 2024-05-15 16:42:41,565 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 09:43:01] 2024-05-15 16:42:41,565 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 09:43:01] 2024-05-15 16:42:41,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 09:43:01] 2024-05-15 16:42:41,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 09:43:01] 2024-05-15 16:42:41,819 | INFO     | all payload control threads have been joined
[2024-05-15 09:43:01] 2024-05-15 16:42:42,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 09:43:01] 2024-05-15 16:42:42,010 | INFO     | aborting loop
[2024-05-15 09:43:01] 2024-05-15 16:42:42,109 | INFO     | all data control threads have been joined
[2024-05-15 09:43:01] 2024-05-15 16:42:42,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 09:43:01] 2024-05-15 16:42:42,461 | INFO     | all job control threads have been joined
[2024-05-15 09:43:01] 2024-05-15 16:42:42,570 | INFO     | [job] retrieve thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:42,640 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:42,828 | INFO     | [payload] control thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:42,836 | INFO     | [payload] failed_post thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:43,015 | INFO     | [job] job monitor thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:43,112 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 09:43:01] 2024-05-15 16:42:43,115 | INFO     | [data] control thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:43,139 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:43,467 | INFO     | [job] control thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:43,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 09:43:01] 2024-05-15 16:42:43,605 | INFO     | [payload] validate_post thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:43,784 | INFO     | [job] validate thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:43,985 | INFO     | [data] copytool_in thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:43,996 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:44,168 | INFO     | [data] copytool_out thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:44,501 | INFO     | [job] queue monitor thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:47,120 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:52,101 | INFO     | job.realtimelogging is not enabled
[2024-05-15 09:43:01] 2024-05-15 16:42:53,106 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 09:43:01] 2024-05-15 16:42:55,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494526998336)>', '<ExcThread(monitor, started 140494243866368)>']
[2024-05-15 09:43:01] 2024-05-15 16:42:55,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 09:43:01] 2024-05-15 16:42:55,642 | INFO     | [monitor] control thread has ended
[2024-05-15 09:43:01] 2024-05-15 16:43:00,194 | INFO     | all workflow threads have been joined
[2024-05-15 09:43:01] 2024-05-15 16:43:00,194 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 09:43:01] 2024-05-15 16:43:00,194 | INFO     | traces error code: 0
[2024-05-15 09:43:01] 2024-05-15 16:43:00,194 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 09:43:01] 2024-05-15 16:43:00,381 [wrapper] ==== pilot stdout END ====
[2024-05-15 09:43:01] 2024-05-15 16:43:00,441 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 09:43:01] 2024-05-15 16:43:00,452 [wrapper] pilotpid: 161447
[2024-05-15 09:43:01] 2024-05-15 16:43:00,454 [wrapper] Pilot exit status: 0
[2024-05-15 09:43:01] 2024-05-15 16:43:00,465 [wrapper] pandaids: 6205655054
[2024-05-15 09:43:01] 2024-05-15 16:43:00,575 [wrapper] cleanup: SIGTERM to supervisor_pilot 257761 161448
[2024-05-15 09:43:01] 2024-05-15 16:43:00,624 [wrapper] Test setup, not cleaning
[2024-05-15 09:43:01] 2024-05-15 16:43:00,627 [wrapper] ==== wrapper stdout END ====
[2024-05-15 09:43:01] 2024-05-15 16:43:00,629 [wrapper] ==== wrapper stderr END ====
[2024-05-15 09:43:01] 2024-05-15 16:43:00,640 [wrapper] apfmon messages muted
[2024-05-15 09:43:01]  *** Error codes and diagnostics ***
[2024-05-15 09:43:01]     "exeErrorCode": 0,
[2024-05-15 09:43:01]     "exeErrorDiag": "",
[2024-05-15 09:43:01]     "pilotErrorCode": 0,
[2024-05-15 09:43:01]     "pilotErrorDiag": "",
[2024-05-15 09:43:01]  *** Listing of results directory ***
[2024-05-15 09:43:01] total 837616
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc    467845 May 12 21:41 pilot3.tar.gz
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc      5633 May 12 21:44 queuedata.json
[2024-05-15 09:43:01] -rwx------ 1 boinc boinc     32251 May 12 21:44 runpilot2-wrapper.sh
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc       100 May 15 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 09:43:01] -rwxr-xr-x 1 boinc boinc      7986 May 15 07:54 run_atlas
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc       105 May 15 07:54 job.xml
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc      6628 May 15 07:54 init_data.xml
[2024-05-15 09:43:01] -rw-r--r-- 2 boinc boinc 599729200 May 15 07:54 EVNT.38776119._000005.pool.root.1
[2024-05-15 09:43:01] drwxrwx--x 2 boinc boinc      4096 May 15 07:54 shared
[2024-05-15 09:43:01] -rw-r--r-- 2 boinc boinc    479994 May 15 07:54 input.tar.gz
[2024-05-15 09:43:01] -rw-r--r-- 2 boinc boinc     17537 May 15 07:54 start_atlas.sh
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc         0 May 15 07:54 boinc_lockfile
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc      2630 May 15 07:54 pandaJob.out
[2024-05-15 09:43:01] -rw------- 1 boinc boinc       424 May 15 07:54 setup.sh.local
[2024-05-15 09:43:01] -rw------- 1 boinc boinc   1010542 May 15 07:54 agis_schedconf.cvmfs.json
[2024-05-15 09:43:01] -rw------- 1 boinc boinc         0 May 15 07:54 agis_ddmendpoints.agis.ALL.json
[2024-05-15 09:43:01] -rw------- 1 boinc boinc   1325758 May 15 07:54 cric_ddmendpoints.json
[2024-05-15 09:43:01] drwx------ 4 boinc boinc      4096 May 15 07:54 pilot3
[2024-05-15 09:43:01] -rw------- 1 boinc boinc 252456086 May 15 09:41 HITS.38776125._000124.pool.root.1
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc       530 May 15 09:41 boinc_task_state.xml
[2024-05-15 09:43:01] -rw------- 1 boinc boinc        95 May 15 09:42 pilot_heartbeat.json
[2024-05-15 09:43:01] -rw------- 1 boinc boinc      1060 May 15 09:42 memory_monitor_summary.json
[2024-05-15 09:43:01] -rw------- 1 boinc boinc    397133 May 15 09:42 log.38776125._000124.job.log.tgz.1
[2024-05-15 09:43:01] -rw------- 1 boinc boinc      7770 May 15 09:42 heartbeat.json
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc      8192 May 15 09:42 boinc_mmap_file
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc        27 May 15 09:42 wrapper_checkpoint.txt
[2024-05-15 09:43:01] -rw------- 1 boinc boinc      4405 May 15 09:43 pilotlog.txt
[2024-05-15 09:43:01] -rw------- 1 boinc boinc    606982 May 15 09:43 log.38776125._000124.job.log.1
[2024-05-15 09:43:01] -rw------- 1 boinc boinc       357 May 15 09:43 output.list
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc       620 May 15 09:43 runtime_log
[2024-05-15 09:43:01] -rw------- 1 boinc boinc   1024000 May 15 09:43 result.tar.gz
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc     11286 May 15 09:43 runtime_log.err
[2024-05-15 09:43:01] -rw------- 1 boinc boinc       653 May 15 09:43 Kg0NDmEjcQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmcOJKDmeaeuVm.diag
[2024-05-15 09:43:01] -rw-r--r-- 1 boinc boinc     22039 May 15 09:43 stderr.txt
[2024-05-15 09:43:01] HITS file was successfully produced:
[2024-05-15 09:43:01] -rw------- 1 boinc boinc 252456086 May 15 09:41 shared/HITS.pool.root.1
[2024-05-15 09:43:01]  *** Contents of shared directory: ***
[2024-05-15 09:43:01] total 833716
[2024-05-15 09:43:01] -rw-r--r-- 2 boinc boinc 599729200 May 15 07:54 ATLAS.root_0
[2024-05-15 09:43:01] -rw-r--r-- 2 boinc boinc    479994 May 15 07:54 input.tar.gz
[2024-05-15 09:43:01] -rw-r--r-- 2 boinc boinc     17537 May 15 07:54 start_atlas.sh
[2024-05-15 09:43:01] -rw------- 1 boinc boinc 252456086 May 15 09:41 HITS.pool.root.1
[2024-05-15 09:43:01] -rw------- 1 boinc boinc   1024000 May 15 09:43 result.tar.gz
09:43:03 (157274): run_atlas exited; CPU time 34004.924543
09:43:03 (157274): called boinc_finish(0)

</stderr_txt>
]]>

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