Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:48:24 (3321750): wrapper (7.7.26015): starting
20:48:24 (3321750): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 20:48:24] Arguments: --nthreads 4
[2024-05-15 20:48:24] Threads: 4
[2024-05-15 20:48:24] Checking for CVMFS
[2024-05-15 20:48:24] No cvmfs_config command found, will try listing directly
[2024-05-15 20:48:24] CVMFS is ok
[2024-05-15 20:48:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 20:48:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 20:48:24] Further information can be found at the LHC@home message board.
[2024-05-15 20:48:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 20:48:24] Checking for apptainer binary...
[2024-05-15 20:48:24] which: no apptainer in ((null))
[2024-05-15 20:48:24] apptainer is not installed, using version from CVMFS
[2024-05-15 20:48:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 20:48:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2024-05-15 20:48:25] apptainer works
[2024-05-15 20:48:25] Set ATHENA_PROC_NUMBER=4
[2024-05-15 20:48:25] Set ATHENA_CORE_NUMBER=4
[2024-05-15 20:48:25] Starting ATLAS job with PandaID=6203532341
[2024-05-15 20:48:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 18:02:32]  *** The last 200 lines of the pilot log: ***
[2024-05-16 18:02:32] 2024-05-16 16:02:07,285 | INFO     | preparing for final server update for job 6203532341 in state='finished'
[2024-05-16 18:02:32] 2024-05-16 16:02:07,286 | INFO     | this job has now completed (state=finished)
[2024-05-16 18:02:32] 2024-05-16 16:02:07,286 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 18:02:32] 2024-05-16 16:02:07,286 | INFO     | job 6203532341 has finished - writing final server update
[2024-05-16 18:02:32] 2024-05-16 16:02:07,286 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3871848/.job.ad'
[2024-05-16 18:02:32] 2024-05-16 16:02:07,286 | INFO     | total number of processed events: 1950 (read)
[2024-05-16 18:02:32] 2024-05-16 16:02:07,290 | INFO     | executing command: lscpu
[2024-05-16 18:02:32] 2024-05-16 16:02:07,354 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-05-16 18:02:32] 2024-05-16 16:02:07,355 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 18:02:32] 2024-05-16 16:02:07,400 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 18:02:32] 2024-05-16 16:02:09,144 | INFO     | monitor loop #5790: job 0:6203532341 is in state 'finished'
[2024-05-16 18:02:32] 2024-05-16 16:02:09,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 18:02:32] 2024-05-16 16:02:11,647 | INFO     | monitor loop #5791: job 0:6203532341 is in state 'finished'
[2024-05-16 18:02:32] 2024-05-16 16:02:11,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 18:02:32] 2024-05-16 16:02:14,150 | INFO     | monitor loop #5792: job 0:6203532341 is in state 'finished'
[2024-05-16 18:02:32] 2024-05-16 16:02:14,150 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 18:02:32] 2024-05-16 16:02:14,257 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-16 18:02:32] 2024-05-16 16:02:14,258 | INFO     | using path: /scratch/boinc/var/slot48/slots/1/PanDA_Pilot-6203532341/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 18:02:32] 2024-05-16 16:02:14,258 | INFO     | extracted standard info from prmon json
[2024-05-16 18:02:32] 2024-05-16 16:02:14,258 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 18:02:32] 2024-05-16 16:02:14,258 | WARNING  | GPU info not found in prmon json
[2024-05-16 18:02:32] 2024-05-16 16:02:14,270 | INFO     | fitting pss+swap vs Time
[2024-05-16 18:02:32] 2024-05-16 16:02:14,271 | INFO     | model: linear, x: [1715798939.0, 1715799000.0, 1715799061.0, 1715799122.0, 1715799183.0, 1715799244.0, 1715799305.0, 1715799366.0, 1715799427.0, 1715799488.0, 1715
[2024-05-16 18:02:32] 2024-05-16 16:02:14,272 | INFO     | sum of square deviations: 610002142442.0
[2024-05-16 18:02:32] 2024-05-16 16:02:14,293 | INFO     | sum of deviations: 2678548844678.0
[2024-05-16 18:02:32] 2024-05-16 16:02:14,293 | INFO     | mean x: 1715837125.0
[2024-05-16 18:02:32] 2024-05-16 16:02:14,293 | INFO     | mean y: 2645745.932162809
[2024-05-16 18:02:32] 2024-05-16 16:02:14,293 | INFO     | -- intersect: -7531677872.056377
[2024-05-16 18:02:32] 2024-05-16 16:02:14,293 | INFO     | intersect: -7531677872.056377
[2024-05-16 18:02:32] 2024-05-16 16:02:14,294 | INFO     | chi2: 13.896469399642285
[2024-05-16 18:02:32] 2024-05-16 16:02:14,295 | INFO     | model: linear, x: [1715798939.0, 1715799000.0, 1715799061.0, 1715799122.0, 1715799183.0, 1715799244.0, 1715799305.0, 1715799366.0, 1715799427.0, 1715799488.0, 1715
[2024-05-16 18:02:32] 2024-05-16 16:02:14,295 | INFO     | sum of square deviations: 602728740952.0
[2024-05-16 18:02:32] 2024-05-16 16:02:14,316 | INFO     | sum of deviations: 3056521346580.999
[2024-05-16 18:02:32] 2024-05-16 16:02:14,316 | INFO     | mean x: 1715836972.5
[2024-05-16 18:02:32] 2024-05-16 16:02:14,316 | INFO     | mean y: 2653669.5737179485
[2024-05-16 18:02:32] 2024-05-16 16:02:14,316 | INFO     | -- intersect: -8698594466.388037
[2024-05-16 18:02:32] 2024-05-16 16:02:14,316 | INFO     | intersect: -8698594466.388037
[2024-05-16 18:02:32] 2024-05-16 16:02:14,317 | INFO     | chi2: 10.949790436484374
[2024-05-16 18:02:32] 2024-05-16 16:02:14,317 | INFO     | current chi2=10.949790436484374 (change=21.204515178752978 %)
[2024-05-16 18:02:32] 2024-05-16 16:02:14,317 | INFO     | right removable region: 1247
[2024-05-16 18:02:32] 2024-05-16 16:02:14,318 | INFO     | model: linear, x: [1715799244.0, 1715799305.0, 1715799366.0, 1715799427.0, 1715799488.0, 1715799549.0, 1715799610.0, 1715799671.0, 1715799732.0, 1715799793.0, 1715
[2024-05-16 18:02:32] 2024-05-16 16:02:14,318 | INFO     | sum of square deviations: 602728740952.0
[2024-05-16 18:02:32] 2024-05-16 16:02:14,351 | INFO     | sum of deviations: 2299857380884.5
[2024-05-16 18:02:32] 2024-05-16 16:02:14,351 | INFO     | mean x: 1715837277.5
[2024-05-16 18:02:32] 2024-05-16 16:02:14,351 | INFO     | mean y: 2653683.3661858975
[2024-05-16 18:02:32] 2024-05-16 16:02:14,351 | INFO     | -- intersect: -6544538708.392359
[2024-05-16 18:02:32] 2024-05-16 16:02:14,351 | INFO     | intersect: -6544538708.392359
[2024-05-16 18:02:32] 2024-05-16 16:02:14,352 | INFO     | chi2: 11.010544841057147
[2024-05-16 18:02:32] 2024-05-16 16:02:14,352 | INFO     | current chi2=11.010544841057147 (change=20.767322084409628 %)
[2024-05-16 18:02:32] 2024-05-16 16:02:14,352 | INFO     | left removable region: 10
[2024-05-16 18:02:32] 2024-05-16 16:02:14,353 | INFO     | model: linear, x: [1715799549.0, 1715799610.0, 1715799671.0, 1715799732.0, 1715799793.0, 1715799854.0, 1715799915.0, 1715799976.0, 1715800037.0, 1715800098.0, 1715
[2024-05-16 18:02:32] 2024-05-16 16:02:14,353 | INFO     | sum of square deviations: 586931257778.0
[2024-05-16 18:02:32] 2024-05-16 16:02:14,374 | INFO     | sum of deviations: 2441087311275.0005
[2024-05-16 18:02:32] 2024-05-16 16:02:14,374 | INFO     | mean x: 1715837247.0
[2024-05-16 18:02:32] 2024-05-16 16:02:14,374 | INFO     | mean y: 2670062.140662894
[2024-05-16 18:02:32] 2024-05-16 16:02:14,374 | INFO     | -- intersect: -7133614598.7267
[2024-05-16 18:02:32] 2024-05-16 16:02:14,374 | INFO     | intersect: -7133614598.7267
[2024-05-16 18:02:32] 2024-05-16 16:02:14,375 | INFO     | chi2: 5.545959278463673
[2024-05-16 18:02:32] 2024-05-16 16:02:14,375 | INFO     | -- intersect: -7133614598.7267
[2024-05-16 18:02:32] 2024-05-16 16:02:14,375 | INFO     | current memory leak: 4.16 B/s (using 1237 data points, chi2=5.55)
[2024-05-16 18:02:32] 2024-05-16 16:02:14,376 | INFO     | ..............................
[2024-05-16 18:02:32] 2024-05-16 16:02:14,376 | INFO     | . Timing measurements:
[2024-05-16 18:02:32] 2024-05-16 16:02:14,376 | INFO     | . get job = 0 s
[2024-05-16 18:02:32] 2024-05-16 16:02:14,376 | INFO     | . initial setup = 1 s
[2024-05-16 18:02:32] 2024-05-16 16:02:14,376 | INFO     | . payload setup = 7 s
[2024-05-16 18:02:32] 2024-05-16 16:02:14,376 | INFO     | . stage-in = 0 s
[2024-05-16 18:02:32] 2024-05-16 16:02:14,376 | INFO     | . payload execution = 76383 s
[2024-05-16 18:02:32] 2024-05-16 16:02:14,376 | INFO     | . stage-out = 2 s
[2024-05-16 18:02:32] 2024-05-16 16:02:14,376 | INFO     | . log creation = 0 s
[2024-05-16 18:02:32] 2024-05-16 16:02:14,376 | INFO     | ..............................
[2024-05-16 18:02:32] 2024-05-16 16:02:14,701 | INFO     | 
[2024-05-16 18:02:32] 2024-05-16 16:02:14,701 | INFO     | job summary report
[2024-05-16 18:02:32] 2024-05-16 16:02:14,701 | INFO     | --------------------------------------------------
[2024-05-16 18:02:32] 2024-05-16 16:02:14,701 | INFO     | PanDA job id: 6203532341
[2024-05-16 18:02:32] 2024-05-16 16:02:14,701 | INFO     | task id: 38734053
[2024-05-16 18:02:32] 2024-05-16 16:02:14,701 | INFO     | errors: (none)
[2024-05-16 18:02:32] 2024-05-16 16:02:14,701 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 18:02:32] 2024-05-16 16:02:14,701 | INFO     | pilot state: finished 
[2024-05-16 18:02:32] 2024-05-16 16:02:14,701 | INFO     | transexitcode: 0
[2024-05-16 18:02:32] 2024-05-16 16:02:14,701 | INFO     | exeerrorcode: 0
[2024-05-16 18:02:32] 2024-05-16 16:02:14,701 | INFO     | exeerrordiag: 
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | exitcode: 0
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | exitmsg: OK
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | cpuconsumptiontime: 299658 s
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | nevents: 1950
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | neventsw: 0
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | pid: 3333763
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | pgrp: 3333763
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | corecount: 4
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | event service: False
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | sizes: {0: 2392558, 3: 2392764, 11: 2392792, 76394: 2471671, 76395: 2471670, 76397: 2480708, 76398: 2480892, 76407: 2481114}
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | --------------------------------------------------
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | 
[2024-05-16 18:02:32] 2024-05-16 16:02:14,702 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/1
[2024-05-16 18:02:32] 2024-05-16 16:02:14,725 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,726 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,726 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,726 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,726 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,726 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,727 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 18:02:32] 2024-05-16 16:02:14,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,727 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 18:02:32] 2024-05-16 16:02:14,727 | INFO     | job 6203532341 has completed (purged errors)
[2024-05-16 18:02:32] 2024-05-16 16:02:14,728 | INFO     | overall cleanup function is called
[2024-05-16 18:02:32] 2024-05-16 16:02:15,741 | INFO     | --- collectZombieJob: --- 10, [3333763]
[2024-05-16 18:02:32] 2024-05-16 16:02:15,741 | INFO     | zombie collector waiting for pid 3333763
[2024-05-16 18:02:32] 2024-05-16 16:02:15,741 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 18:02:32] 2024-05-16 16:02:16,746 | INFO     | collected zombie processes
[2024-05-16 18:02:32] 2024-05-16 16:02:16,746 | INFO     | will now attempt to kill all subprocesses of pid=3333763
[2024-05-16 18:02:32] 2024-05-16 16:02:16,904 | INFO     | process IDs to be killed: [3333763] (in reverse order)
[2024-05-16 18:02:32] 2024-05-16 16:02:17,010 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 18:02:32] 2024-05-16 16:02:17,011 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 18:02:32] 2024-05-16 16:02:17,020 | INFO     | did not find any defunct processes belonging to 3333763
[2024-05-16 18:02:32] 2024-05-16 16:02:17,027 | INFO     | did not find any defunct processes belonging to 3333763
[2024-05-16 18:02:32] 2024-05-16 16:02:17,027 | INFO     | ready for new job
[2024-05-16 18:02:32] 2024-05-16 16:02:17,027 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 18:02:32] 2024-05-16 16:02:17,033 | INFO     | *************************************
[2024-05-16 18:02:32] 2024-05-16 16:02:17,033 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 18:02:32] 2024-05-16 16:02:17,033 | INFO     | *************************************
[2024-05-16 18:02:32] 2024-05-16 16:02:17,033 | INFO     | 
[2024-05-16 18:02:32] 2024-05-16 16:02:17,036 | INFO     | architecture information:
[2024-05-16 18:02:32] 2024-05-16 16:02:17,036 | INFO     | executing command: cat /etc/os-release
[2024-05-16 18:02:32] 2024-05-16 16:02:17,053 | INFO     | cat /etc/os-release:
[2024-05-16 18:02:32] NAME="CentOS Linux"
[2024-05-16 18:02:32] VERSION="7 (Core)"
[2024-05-16 18:02:32] ID="centos"
[2024-05-16 18:02:32] ID_LIKE="rhel fedora"
[2024-05-16 18:02:32] VERSION_ID="7"
[2024-05-16 18:02:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 18:02:32] ANSI_COLOR="0;31"
[2024-05-16 18:02:32] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 18:02:32] HOME_URL="https://www.centos.org/"
[2024-05-16 18:02:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 18:02:32] 
[2024-05-16 18:02:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 18:02:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 18:02:32] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 18:02:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 18:02:32] 
[2024-05-16 18:02:32] 2024-05-16 16:02:17,054 | INFO     | *************************************
[2024-05-16 18:02:32] 2024-05-16 16:02:17,556 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/1
[2024-05-16 18:02:32] 2024-05-16 16:02:17,577 | INFO     | sufficient remaining disk space (546263007232 B)
[2024-05-16 18:02:32] 2024-05-16 16:02:17,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 18:02:32] 2024-05-16 16:02:17,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 18:02:32] 2024-05-16 16:02:17,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 18:02:32] 2024-05-16 16:02:17,625 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 18:02:32] 2024-05-16 16:02:17,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 18:02:32] 2024-05-16 16:02:17,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 18:02:32] 2024-05-16 16:02:17,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 18:02:32] 2024-05-16 16:02:17,659 | INFO     | aborting loop
[2024-05-16 18:02:32] 2024-05-16 16:02:18,222 | INFO     | all payload control threads have been joined
[2024-05-16 18:02:32] 2024-05-16 16:02:18,533 | INFO     | all data control threads have been joined
[2024-05-16 18:02:32] 2024-05-16 16:02:18,583 | INFO     | [job] retrieve thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:18,611 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:18,664 | INFO     | [job] job monitor thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:18,717 | INFO     | [payload] validate_post thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:19,183 | INFO     | all job control threads have been joined
[2024-05-16 18:02:32] 2024-05-16 16:02:19,228 | INFO     | [payload] control thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:19,353 | INFO     | [job] validate thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:19,447 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 18:02:32] 2024-05-16 16:02:19,538 | INFO     | [data] control thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:19,583 | INFO     | [data] copytool_out thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:19,694 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:19,773 | INFO     | [payload] failed_post thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:19,872 | INFO     | [data] copytool_in thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:19,873 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:20,080 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:20,188 | INFO     | [job] control thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:20,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 18:02:32] 2024-05-16 16:02:20,455 | INFO     | [job] queue monitor thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:24,353 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 18:02:32] 2024-05-16 16:02:26,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47630270600256)>', '<ExcThread(monitor, started 47630439749376)>']
[2024-05-16 18:02:32] 2024-05-16 16:02:26,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 18:02:32] 2024-05-16 16:02:26,666 | INFO     | [monitor] control thread has ended
[2024-05-16 18:02:32] 2024-05-16 16:02:31,297 | INFO     | all workflow threads have been joined
[2024-05-16 18:02:32] 2024-05-16 16:02:31,297 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 18:02:32] 2024-05-16 16:02:31,297 | INFO     | traces error code: 0
[2024-05-16 18:02:32] 2024-05-16 16:02:31,297 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 18:02:32] 2024-05-16 16:02:31,387 [wrapper] ==== pilot stdout END ====
[2024-05-16 18:02:32] 2024-05-16 16:02:31,389 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 18:02:32] 2024-05-16 16:02:31,391 [wrapper] pilotpid: 3326054
[2024-05-16 18:02:32] 2024-05-16 16:02:31,394 [wrapper] Pilot exit status: 0
[2024-05-16 18:02:32] 2024-05-16 16:02:31,401 [wrapper] pandaids: 6203532341
[2024-05-16 18:02:32] 2024-05-16 16:02:31,487 [wrapper] cleanup: SIGTERM to supervisor_pilot 2223373 3326055
[2024-05-16 18:02:32] 2024-05-16 16:02:31,490 [wrapper] Test setup, not cleaning
[2024-05-16 18:02:32] 2024-05-16 16:02:31,492 [wrapper] ==== wrapper stdout END ====
[2024-05-16 18:02:32] 2024-05-16 16:02:31,494 [wrapper] ==== wrapper stderr END ====
[2024-05-16 18:02:32] 2024-05-16 16:02:31,498 [wrapper] apfmon messages muted
[2024-05-16 18:02:32]  *** Error codes and diagnostics ***
[2024-05-16 18:02:32]     "exeErrorCode": 0,
[2024-05-16 18:02:32]     "exeErrorDiag": "",
[2024-05-16 18:02:32]     "pilotErrorCode": 0,
[2024-05-16 18:02:32]     "pilotErrorDiag": "",
[2024-05-16 18:02:32]  *** Listing of results directory ***
[2024-05-16 18:02:32] total 1515544
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc     467845 May 12 07:27 pilot3.tar.gz
[2024-05-16 18:02:32] -rwx------ 1 boinc boinc      32251 May 12 07:42 runpilot2-wrapper.sh
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc       5633 May 12 07:43 queuedata.json
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc        100 May 15 20:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 18:02:32] -rwxr-xr-x 1 boinc boinc       7986 May 15 20:48 run_atlas
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc        105 May 15 20:48 job.xml
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc       6663 May 15 20:48 init_data.xml
[2024-05-16 18:02:32] -rw-r--r-- 2 boinc boinc  329501303 May 15 20:48 EVNT.38734051._000991.pool.root.1
[2024-05-16 18:02:32] -rw-r--r-- 2 boinc boinc      17537 May 15 20:48 start_atlas.sh
[2024-05-16 18:02:32] drwxrwx--x 2 boinc boinc       4096 May 15 20:48 shared
[2024-05-16 18:02:32] -rw-r--r-- 2 boinc boinc     480160 May 15 20:48 input.tar.gz
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc          0 May 15 20:48 boinc_lockfile
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc       2860 May 15 20:48 pandaJob.out
[2024-05-16 18:02:32] -rw------- 1 boinc boinc        424 May 15 20:48 setup.sh.local
[2024-05-16 18:02:32] -rw------- 1 boinc boinc    1011265 May 15 20:48 agis_schedconf.cvmfs.json
[2024-05-16 18:02:32] -rw------- 1 boinc boinc    1324701 May 15 20:48 cric_ddmendpoints.json
[2024-05-16 18:02:32] drwx------ 4 boinc boinc       4096 May 15 20:48 pilot3
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc        533 May 16 17:54 boinc_task_state.xml
[2024-05-16 18:02:32] -rw------- 1 boinc boinc 1186916780 May 16 18:01 HITS.38734053._006353.pool.root.1
[2024-05-16 18:02:32] -rw------- 1 boinc boinc       1067 May 16 18:01 memory_monitor_summary.json
[2024-05-16 18:02:32] -rw------- 1 boinc boinc          0 May 16 18:02 agis_ddmendpoints.agis.ALL.json
[2024-05-16 18:02:32] -rw------- 1 boinc boinc    2180694 May 16 18:02 log.38734053._006353.job.log.tgz.1
[2024-05-16 18:02:32] -rw------- 1 boinc boinc      27692 May 16 18:02 heartbeat.json
[2024-05-16 18:02:32] -rw------- 1 boinc boinc         95 May 16 18:02 pilot_heartbeat.json
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc         29 May 16 18:02 wrapper_checkpoint.txt
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc       8192 May 16 18:02 boinc_mmap_file
[2024-05-16 18:02:32] -rw------- 1 boinc boinc       4221 May 16 18:02 pilotlog.txt
[2024-05-16 18:02:32] -rw------- 1 boinc boinc   13785679 May 16 18:02 log.38734053._006353.job.log.1
[2024-05-16 18:02:32] -rw------- 1 boinc boinc        353 May 16 18:02 output.list
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc        620 May 16 18:02 runtime_log
[2024-05-16 18:02:32] -rw------- 1 boinc boinc   16005120 May 16 18:02 result.tar.gz
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc      11410 May 16 18:02 runtime_log.err
[2024-05-16 18:02:32] -rw------- 1 boinc boinc        665 May 16 18:02 U37LDmEAHQ5nsSi4apGgGQJmABFKDmABFKDm4ySLDmMIJKDmx9htRo.diag
[2024-05-16 18:02:32] -rw-r--r-- 1 boinc boinc      21725 May 16 18:02 stderr.txt
[2024-05-16 18:02:32] HITS file was successfully produced:
[2024-05-16 18:02:32] -rw------- 1 boinc boinc 1186916780 May 16 18:01 shared/HITS.pool.root.1
[2024-05-16 18:02:32]  *** Contents of shared directory: ***
[2024-05-16 18:02:32] total 1497012
[2024-05-16 18:02:32] -rw-r--r-- 2 boinc boinc  329501303 May 15 20:48 ATLAS.root_0
[2024-05-16 18:02:32] -rw-r--r-- 2 boinc boinc      17537 May 15 20:48 start_atlas.sh
[2024-05-16 18:02:32] -rw-r--r-- 2 boinc boinc     480160 May 15 20:48 input.tar.gz
[2024-05-16 18:02:32] -rw------- 1 boinc boinc 1186916780 May 16 18:01 HITS.pool.root.1
[2024-05-16 18:02:32] -rw------- 1 boinc boinc   16005120 May 16 18:02 result.tar.gz
18:02:34 (3321750): run_atlas exited; CPU time 297406.370698
18:02:34 (3321750): called boinc_finish(0)

</stderr_txt>
]]>

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