Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
19:45:43 (15890): wrapper (7.7.26015): starting
19:45:43 (15890): wrapper: running run_atlas (--nthreads 12)
[2024-05-14 19:45:43] Arguments: --nthreads 12
[2024-05-14 19:45:43] Threads: 12
[2024-05-14 19:45:43] Checking for CVMFS
[2024-05-14 19:45:44] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-14 19:45:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-14 19:45:44] Running cvmfs_config stat atlas.cern.ch
[2024-05-14 19:45:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-14 19:45:44] 2.10.1.0 112161 180013 186268 132744 2 298 31915341 45568001 16441 130560 0 1149842938 99.755 730880969 16842 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-14 19:45:44] CVMFS is ok
[2024-05-14 19:45:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-14 19:45:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-14 19:45:44] Further information can be found at the LHC@home message board.
[2024-05-14 19:45:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-14 19:45:44] Checking for apptainer binary...
[2024-05-14 19:45:44] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-14 19:45:44] Running /usr/bin/apptainer --version
[2024-05-14 19:45:45] apptainer version 1.1.8-1.el7
[2024-05-14 19:45:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-14 19:45:46] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0037.triumf.lcg
[2024-05-14 19:45:46] apptainer works
[2024-05-14 19:45:46] Set ATHENA_PROC_NUMBER=12
[2024-05-14 19:45:46] Set ATHENA_CORE_NUMBER=12
[2024-05-14 19:45:47] Starting ATLAS job with PandaID=6201838384
[2024-05-14 19:45:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 03:05:04]  *** The last 200 lines of the pilot log: ***
[2024-05-17 03:05:04] 2024-05-17 10:04:38,449 | INFO     | monitor loop #5755: job 0:6201838384 is in state 'finished'
[2024-05-17 03:05:04] 2024-05-17 10:04:38,449 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 03:05:04] 2024-05-17 10:04:38,786 | INFO     | job 6201838384 has state=finished
[2024-05-17 03:05:04] 2024-05-17 10:04:38,787 | INFO     | preparing for final server update for job 6201838384 in state='finished'
[2024-05-17 03:05:04] 2024-05-17 10:04:38,787 | INFO     | this job has now completed (state=finished)
[2024-05-17 03:05:04] 2024-05-17 10:04:38,787 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 03:05:04] 2024-05-17 10:04:38,787 | INFO     | job 6201838384 has finished - writing final server update
[2024-05-17 03:05:04] 2024-05-17 10:04:38,788 | INFO     | total number of processed events: 1950 (read)
[2024-05-17 03:05:04] 2024-05-17 10:04:38,793 | INFO     | executing command: lscpu
[2024-05-17 03:05:04] 2024-05-17 10:04:38,858 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 03:05:04] 2024-05-17 10:04:38,858 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 03:05:04] 2024-05-17 10:04:38,898 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 03:05:04] 2024-05-17 10:04:40,951 | INFO     | monitor loop #5756: job 0:6201838384 is in state 'finished'
[2024-05-17 03:05:04] 2024-05-17 10:04:40,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 03:05:04] 2024-05-17 10:04:42,438 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 03:05:04] 2024-05-17 10:04:42,440 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6201838384/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 03:05:04] 2024-05-17 10:04:42,442 | INFO     | extracted standard info from prmon json
[2024-05-17 03:05:04] 2024-05-17 10:04:42,442 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 03:05:04] 2024-05-17 10:04:42,442 | WARNING  | GPU info not found in prmon json
[2024-05-17 03:05:04] 2024-05-17 10:04:42,474 | INFO     | fitting pss+swap vs Time
[2024-05-17 03:05:04] 2024-05-17 10:04:42,476 | INFO     | model: linear, x: [1715741579.0, 1715741640.0, 1715741701.0, 1715741763.0, 1715741824.0, 1715741885.0, 1715741945.0, 1715742010.0, 1715742071.0, 1715742131.0, 1715
[2024-05-17 03:05:04] 2024-05-17 10:04:42,477 | INFO     | sum of square deviations: 10421562564658.02
[2024-05-17 03:05:04] 2024-05-17 10:04:42,606 | INFO     | sum of deviations: 49427065550713.65
[2024-05-17 03:05:04] 2024-05-17 10:04:42,607 | INFO     | mean x: 1715840756.0176394
[2024-05-17 03:05:04] 2024-05-17 10:04:42,607 | INFO     | mean y: 3848642.5513149453
[2024-05-17 03:05:04] 2024-05-17 10:04:42,607 | INFO     | -- intersect: -8133987981.860189
[2024-05-17 03:05:04] 2024-05-17 10:04:42,607 | INFO     | intersect: -8133987981.860189
[2024-05-17 03:05:04] 2024-05-17 10:04:42,609 | INFO     | chi2: 57.39590095318771
[2024-05-17 03:05:04] 2024-05-17 10:04:42,610 | INFO     | model: linear, x: [1715741579.0, 1715741640.0, 1715741701.0, 1715741763.0, 1715741824.0, 1715741885.0, 1715741945.0, 1715742010.0, 1715742071.0, 1715742131.0, 1715
[2024-05-17 03:05:04] 2024-05-17 10:04:42,611 | INFO     | sum of square deviations: 10372141115187.5
[2024-05-17 03:05:04] 2024-05-17 10:04:42,737 | INFO     | sum of deviations: 50950117955873.63
[2024-05-17 03:05:04] 2024-05-17 10:04:42,737 | INFO     | mean x: 1715840596.4609702
[2024-05-17 03:05:04] 2024-05-17 10:04:42,738 | INFO     | mean y: 3853559.774494057
[2024-05-17 03:05:04] 2024-05-17 10:04:42,738 | INFO     | -- intersect: -8424712906.136208
[2024-05-17 03:05:04] 2024-05-17 10:04:42,738 | INFO     | intersect: -8424712906.136208
[2024-05-17 03:05:04] 2024-05-17 10:04:42,739 | INFO     | chi2: 54.18841644690914
[2024-05-17 03:05:04] 2024-05-17 10:04:42,739 | INFO     | current chi2=54.18841644690914 (change=5.588351176671328 %)
[2024-05-17 03:05:04] 2024-05-17 10:04:42,739 | INFO     | right removable region: 3112
[2024-05-17 03:05:04] 2024-05-17 10:04:42,741 | INFO     | model: linear, x: [1715741885.0, 1715741945.0, 1715742010.0, 1715742071.0, 1715742131.0, 1715742192.0, 1715742256.0, 1715742315.0, 1715742374.0, 1715742437.0, 1715
[2024-05-17 03:05:04] 2024-05-17 10:04:42,742 | INFO     | sum of square deviations: 10372424643583.146
[2024-05-17 03:05:04] 2024-05-17 10:04:42,868 | INFO     | sum of deviations: 47551713926649.914
[2024-05-17 03:05:04] 2024-05-17 10:04:42,869 | INFO     | mean x: 1715840915.1159654
[2024-05-17 03:05:04] 2024-05-17 10:04:42,869 | INFO     | mean y: 3854714.4545454546
[2024-05-17 03:05:04] 2024-05-17 10:04:42,869 | INFO     | -- intersect: -7862307648.04684
[2024-05-17 03:05:04] 2024-05-17 10:04:42,869 | INFO     | intersect: -7862307648.04684
[2024-05-17 03:05:04] 2024-05-17 10:04:42,871 | INFO     | chi2: 52.16779331632358
[2024-05-17 03:05:04] 2024-05-17 10:04:42,871 | INFO     | current chi2=52.16779331632358 (change=9.108851938970682 %)
[2024-05-17 03:05:04] 2024-05-17 10:04:42,871 | INFO     | left removable region: 10
[2024-05-17 03:05:04] 2024-05-17 10:04:42,872 | INFO     | model: linear, x: [1715742192.0, 1715742256.0, 1715742315.0, 1715742374.0, 1715742437.0, 1715742499.0, 1715742558.0, 1715742618.0, 1715742683.0, 1715742743.0, 1715
[2024-05-17 03:05:04] 2024-05-17 10:04:42,873 | INFO     | sum of square deviations: 10264523808482.049
[2024-05-17 03:05:04] 2024-05-17 10:04:42,997 | INFO     | sum of deviations: 47644395285015.66
[2024-05-17 03:05:04] 2024-05-17 10:04:42,997 | INFO     | mean x: 1715840882.7598324
[2024-05-17 03:05:04] 2024-05-17 10:04:42,997 | INFO     | mean y: 3866405.819471309
[2024-05-17 03:05:04] 2024-05-17 10:04:42,997 | INFO     | -- intersect: -7960477853.077927
[2024-05-17 03:05:04] 2024-05-17 10:04:42,997 | INFO     | intersect: -7960477853.077927
[2024-05-17 03:05:04] 2024-05-17 10:04:42,999 | INFO     | chi2: 43.75084239528444
[2024-05-17 03:05:04] 2024-05-17 10:04:42,999 | INFO     | -- intersect: -7960477853.077927
[2024-05-17 03:05:04] 2024-05-17 10:04:42,999 | INFO     | current memory leak: 4.64 B/s (using 3102 data points, chi2=43.75)
[2024-05-17 03:05:04] 2024-05-17 10:04:43,001 | INFO     | ..............................
[2024-05-17 03:05:04] 2024-05-17 10:04:43,001 | INFO     | . Timing measurements:
[2024-05-17 03:05:04] 2024-05-17 10:04:43,001 | INFO     | . get job = 0 s
[2024-05-17 03:05:04] 2024-05-17 10:04:43,001 | INFO     | . initial setup = 7 s
[2024-05-17 03:05:04] 2024-05-17 10:04:43,001 | INFO     | . payload setup = 157 s
[2024-05-17 03:05:04] 2024-05-17 10:04:43,001 | INFO     | . stage-in = 0 s
[2024-05-17 03:05:04] 2024-05-17 10:04:43,001 | INFO     | . payload execution = 198764 s
[2024-05-17 03:05:04] 2024-05-17 10:04:43,001 | INFO     | . stage-out = 4 s
[2024-05-17 03:05:04] 2024-05-17 10:04:43,001 | INFO     | . log creation = 1 s
[2024-05-17 03:05:04] 2024-05-17 10:04:43,001 | INFO     | ..............................
[2024-05-17 03:05:04] 2024-05-17 10:04:43,309 | INFO     | 
[2024-05-17 03:05:04] 2024-05-17 10:04:43,309 | INFO     | job summary report
[2024-05-17 03:05:04] 2024-05-17 10:04:43,309 | INFO     | --------------------------------------------------
[2024-05-17 03:05:04] 2024-05-17 10:04:43,309 | INFO     | PanDA job id: 6201838384
[2024-05-17 03:05:04] 2024-05-17 10:04:43,309 | INFO     | task id: 38734053
[2024-05-17 03:05:04] 2024-05-17 10:04:43,309 | INFO     | errors: (none)
[2024-05-17 03:05:04] 2024-05-17 10:04:43,309 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 03:05:04] 2024-05-17 10:04:43,309 | INFO     | pilot state: finished 
[2024-05-17 03:05:04] 2024-05-17 10:04:43,309 | INFO     | transexitcode: 0
[2024-05-17 03:05:04] 2024-05-17 10:04:43,309 | INFO     | exeerrorcode: 0
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | exeerrordiag: 
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | exitcode: 0
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | exitmsg: OK
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | cpuconsumptiontime: 211008 s
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | nevents: 1950
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | neventsw: 0
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | pid: 54169
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | pgrp: 54169
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | corecount: 12
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | event service: False
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | sizes: {0: 2393986, 1: 2394921, 12: 2394921, 24: 2394949, 37: 2394977, 48: 2395005, 59: 2395161, 62: 2395395, 72: 2395423, 198926: 2502466, 198930: 2511420, 198933
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | --------------------------------------------------
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | 
[2024-05-17 03:05:04] 2024-05-17 10:04:43,310 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 03:05:04] 2024-05-17 10:04:43,335 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,336 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,336 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,336 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,337 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,337 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,337 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,337 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,337 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,337 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,337 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,337 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 03:05:04] 2024-05-17 10:04:43,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,337 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 03:05:04] 2024-05-17 10:04:43,338 | INFO     | job 6201838384 has completed (purged errors)
[2024-05-17 03:05:04] 2024-05-17 10:04:43,338 | INFO     | overall cleanup function is called
[2024-05-17 03:05:04] 2024-05-17 10:04:44,357 | INFO     | --- collectZombieJob: --- 10, [54169]
[2024-05-17 03:05:04] 2024-05-17 10:04:44,358 | INFO     | zombie collector waiting for pid 54169
[2024-05-17 03:05:04] 2024-05-17 10:04:44,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 03:05:04] 2024-05-17 10:04:45,360 | INFO     | collected zombie processes
[2024-05-17 03:05:04] 2024-05-17 10:04:45,360 | INFO     | will now attempt to kill all subprocesses of pid=54169
[2024-05-17 03:05:04] 2024-05-17 10:04:45,584 | INFO     | process IDs to be killed: [54169] (in reverse order)
[2024-05-17 03:05:04] 2024-05-17 10:04:45,730 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 03:05:04] 2024-05-17 10:04:45,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 03:05:04] 2024-05-17 10:04:45,744 | INFO     | did not find any defunct processes belonging to 54169
[2024-05-17 03:05:04] 2024-05-17 10:04:45,756 | INFO     | did not find any defunct processes belonging to 54169
[2024-05-17 03:05:04] 2024-05-17 10:04:45,757 | INFO     | ready for new job
[2024-05-17 03:05:04] 2024-05-17 10:04:45,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 03:05:04] 2024-05-17 10:04:45,767 | INFO     | *************************************
[2024-05-17 03:05:04] 2024-05-17 10:04:45,768 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 03:05:04] 2024-05-17 10:04:45,768 | INFO     | *************************************
[2024-05-17 03:05:04] 2024-05-17 10:04:45,768 | INFO     | 
[2024-05-17 03:05:04] 2024-05-17 10:04:45,772 | INFO     | architecture information:
[2024-05-17 03:05:04] 2024-05-17 10:04:45,773 | INFO     | executing command: cat /etc/os-release
[2024-05-17 03:05:04] 2024-05-17 10:04:45,795 | INFO     | cat /etc/os-release:
[2024-05-17 03:05:04] NAME="CentOS Linux"
[2024-05-17 03:05:04] VERSION="7 (Core)"
[2024-05-17 03:05:04] ID="centos"
[2024-05-17 03:05:04] ID_LIKE="rhel fedora"
[2024-05-17 03:05:04] VERSION_ID="7"
[2024-05-17 03:05:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 03:05:04] ANSI_COLOR="0;31"
[2024-05-17 03:05:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 03:05:04] HOME_URL="https://www.centos.org/"
[2024-05-17 03:05:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 03:05:04] 
[2024-05-17 03:05:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 03:05:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 03:05:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 03:05:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 03:05:04] 
[2024-05-17 03:05:04] 2024-05-17 10:04:45,796 | INFO     | *************************************
[2024-05-17 03:05:04] 2024-05-17 10:04:46,298 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 03:05:04] 2024-05-17 10:04:46,321 | INFO     | sufficient remaining disk space (2049483735040 B)
[2024-05-17 03:05:04] 2024-05-17 10:04:46,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 03:05:04] 2024-05-17 10:04:46,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 03:05:04] 2024-05-17 10:04:46,322 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-17 03:05:04] 2024-05-17 10:04:46,323 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 03:05:04] 2024-05-17 10:04:46,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 03:05:04] 2024-05-17 10:04:46,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 03:05:04] 2024-05-17 10:04:46,527 | INFO     | all data control threads have been joined
[2024-05-17 03:05:04] 2024-05-17 10:04:46,653 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 03:05:04] 2024-05-17 10:04:46,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 03:05:04] 2024-05-17 10:04:46,966 | INFO     | aborting loop
[2024-05-17 03:05:04] 2024-05-17 10:04:46,991 | INFO     | all payload control threads have been joined
[2024-05-17 03:05:04] 2024-05-17 10:04:47,075 | INFO     | all job control threads have been joined
[2024-05-17 03:05:04] 2024-05-17 10:04:47,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 03:05:04] 2024-05-17 10:04:47,327 | INFO     | [job] retrieve thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:47,344 | INFO     | [job] validate thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:47,462 | INFO     | [data] copytool_in thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:47,528 | INFO     | [data] control thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:47,939 | INFO     | [payload] validate_post thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:47,968 | INFO     | [job] job monitor thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:47,994 | INFO     | [payload] control thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:48,066 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 03:05:04] 2024-05-17 10:04:48,078 | INFO     | [job] control thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:48,279 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:48,335 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:48,659 | INFO     | [data] copytool_out thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:48,791 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:48,875 | INFO     | [payload] failed_post thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:49,072 | INFO     | [job] queue monitor thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:51,185 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:56,864 | INFO     | job.realtimelogging is not enabled
[2024-05-17 03:05:04] 2024-05-17 10:04:57,869 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 03:05:04] 2024-05-17 10:04:58,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393974748992)>', '<ExcThread(monitor, started 140393412814592)>']
[2024-05-17 03:05:04] 2024-05-17 10:04:58,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 03:05:04] 2024-05-17 10:04:58,366 | INFO     | [monitor] control thread has ended
[2024-05-17 03:05:04] 2024-05-17 10:05:03,369 | INFO     | all workflow threads have been joined
[2024-05-17 03:05:04] 2024-05-17 10:05:03,369 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 03:05:04] 2024-05-17 10:05:03,370 | INFO     | traces error code: 0
[2024-05-17 03:05:04] 2024-05-17 10:05:03,371 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 03:05:04] 2024-05-17 10:05:03,506 [wrapper] ==== pilot stdout END ====
[2024-05-17 03:05:04] 2024-05-17 10:05:03,509 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 03:05:04] 2024-05-17 10:05:03,513 [wrapper] pilotpid: 21480
[2024-05-17 03:05:04] 2024-05-17 10:05:03,517 [wrapper] Pilot exit status: 0
[2024-05-17 03:05:04] 2024-05-17 10:05:03,528 [wrapper] pandaids: 6201838384
[2024-05-17 03:05:04] 2024-05-17 10:05:03,604 [wrapper] cleanup: SIGTERM to supervisor_pilot  55206 21481
[2024-05-17 03:05:04] 2024-05-17 10:05:03,609 [wrapper] Test setup, not cleaning
[2024-05-17 03:05:04] 2024-05-17 10:05:03,613 [wrapper] ==== wrapper stdout END ====
[2024-05-17 03:05:04] 2024-05-17 10:05:03,616 [wrapper] ==== wrapper stderr END ====
[2024-05-17 03:05:04] 2024-05-17 10:05:03,624 [wrapper] apfmon messages muted
[2024-05-17 03:05:04]  *** Error codes and diagnostics ***
[2024-05-17 03:05:04]     "exeErrorCode": 0,
[2024-05-17 03:05:04]     "exeErrorDiag": "",
[2024-05-17 03:05:04]     "pilotErrorCode": 0,
[2024-05-17 03:05:04]     "pilotErrorDiag": "",
[2024-05-17 03:05:04]  *** Listing of results directory ***
[2024-05-17 03:05:04] total 1554828
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc     467845 May 10 12:21 pilot3.tar.gz
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc       5633 May 10 12:22 queuedata.json
[2024-05-17 03:05:04] -rwx------ 1 boinc boinc      32251 May 10 12:23 runpilot2-wrapper.sh
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc        100 May 14 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 03:05:04] -rwxr-xr-x 1 boinc boinc       7986 May 14 19:45 run_atlas
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc        105 May 14 19:45 job.xml
[2024-05-17 03:05:04] -rw-r--r-- 2 boinc boinc  329453944 May 14 19:45 EVNT.38734051._000989.pool.root.1
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc       6627 May 14 19:45 init_data.xml
[2024-05-17 03:05:04] drwxrwx--x 2 boinc boinc       4096 May 14 19:45 shared
[2024-05-17 03:05:04] -rw-r--r-- 2 boinc boinc     480159 May 14 19:45 input.tar.gz
[2024-05-17 03:05:04] -rw-r--r-- 2 boinc boinc      17537 May 14 19:45 start_atlas.sh
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc          0 May 14 19:45 boinc_lockfile
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc       2853 May 14 19:45 pandaJob.out
[2024-05-17 03:05:04] -rw------- 1 boinc boinc        424 May 14 19:45 setup.sh.local
[2024-05-17 03:05:04] -rw------- 1 boinc boinc    1008600 May 14 19:47 agis_schedconf.cvmfs.json
[2024-05-17 03:05:04] -rw------- 1 boinc boinc    1324588 May 14 19:47 cric_ddmendpoints.json
[2024-05-17 03:05:04] drwx------ 4 boinc boinc       4096 May 14 19:47 pilot3
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc        534 May 17 02:53 boinc_task_state.xml
[2024-05-17 03:05:04] -rw------- 1 boinc boinc 1197169898 May 17 03:04 HITS.38734053._005530.pool.root.1
[2024-05-17 03:05:04] -rw------- 1 boinc boinc         95 May 17 03:04 pilot_heartbeat.json
[2024-05-17 03:05:04] -rw------- 1 boinc boinc       1085 May 17 03:04 memory_monitor_summary.json
[2024-05-17 03:05:04] -rw------- 1 boinc boinc          0 May 17 03:04 agis_ddmendpoints.agis.ALL.json
[2024-05-17 03:05:04] -rw------- 1 boinc boinc    6994284 May 17 03:04 log.38734053._005530.job.log.tgz.1
[2024-05-17 03:05:04] -rw------- 1 boinc boinc      27876 May 17 03:04 heartbeat.json
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc       8192 May 17 03:04 boinc_mmap_file
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc         29 May 17 03:04 wrapper_checkpoint.txt
[2024-05-17 03:05:04] -rw------- 1 boinc boinc       4405 May 17 03:05 pilotlog.txt
[2024-05-17 03:05:04] -rw------- 1 boinc boinc   23978913 May 17 03:05 log.38734053._005530.job.log.1
[2024-05-17 03:05:04] -rw------- 1 boinc boinc        353 May 17 03:05 output.list
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc        620 May 17 03:05 runtime_log
[2024-05-17 03:05:04] -rw------- 1 boinc boinc   31016960 May 17 03:05 result.tar.gz
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc      11288 May 17 03:05 runtime_log.err
[2024-05-17 03:05:04] -rw------- 1 boinc boinc        667 May 17 03:05 lrjKDmm0kP5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm63FKDmlOJJYm.diag
[2024-05-17 03:05:04] -rw-r--r-- 1 boinc boinc      22207 May 17 03:05 stderr.txt
[2024-05-17 03:05:04] HITS file was successfully produced:
[2024-05-17 03:05:04] -rw------- 1 boinc boinc 1197169898 May 17 03:04 shared/HITS.pool.root.1
[2024-05-17 03:05:04]  *** Contents of shared directory: ***
[2024-05-17 03:05:04] total 1521640
[2024-05-17 03:05:04] -rw-r--r-- 2 boinc boinc  329453944 May 14 19:45 ATLAS.root_0
[2024-05-17 03:05:04] -rw-r--r-- 2 boinc boinc     480159 May 14 19:45 input.tar.gz
[2024-05-17 03:05:04] -rw-r--r-- 2 boinc boinc      17537 May 14 19:45 start_atlas.sh
[2024-05-17 03:05:04] -rw------- 1 boinc boinc 1197169898 May 17 03:04 HITS.pool.root.1
[2024-05-17 03:05:04] -rw------- 1 boinc boinc   31016960 May 17 03:05 result.tar.gz
03:05:05 (15890): run_atlas exited; CPU time 205487.356312
03:05:05 (15890): called boinc_finish(0)

</stderr_txt>
]]>

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