Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:53:18 (3094749): wrapper (7.7.26015): starting
19:53:18 (3094749): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 19:53:18] Arguments: --nthreads 4
[2024-05-15 19:53:18] Threads: 4
[2024-05-15 19:53:18] Checking for CVMFS
[2024-05-15 19:53:18] No cvmfs_config command found, will try listing directly
[2024-05-15 19:53:18] CVMFS is ok
[2024-05-15 19:53:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 19:53:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 19:53:18] Further information can be found at the LHC@home message board.
[2024-05-15 19:53:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 19:53:18] Checking for apptainer binary...
[2024-05-15 19:53:18] which: no apptainer in ((null))
[2024-05-15 19:53:18] apptainer is not installed, using version from CVMFS
[2024-05-15 19:53:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 19:53:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-05-15 19:53:18] apptainer works
[2024-05-15 19:53:18] Set ATHENA_PROC_NUMBER=4
[2024-05-15 19:53:18] Set ATHENA_CORE_NUMBER=4
[2024-05-15 19:53:18] Starting ATLAS job with PandaID=6201812873
[2024-05-15 19:53:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 17:52:29]  *** The last 200 lines of the pilot log: ***
[2024-05-16 17:52:29] 2024-05-16 15:52:05,101 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-16 17:52:29] 2024-05-16 15:52:05,163 | INFO     | job 6201812873 has state=finished
[2024-05-16 17:52:29] 2024-05-16 15:52:05,163 | INFO     | preparing for final server update for job 6201812873 in state='finished'
[2024-05-16 17:52:29] 2024-05-16 15:52:05,164 | INFO     | this job has now completed (state=finished)
[2024-05-16 17:52:29] 2024-05-16 15:52:05,164 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 17:52:29] 2024-05-16 15:52:05,164 | INFO     | job 6201812873 has finished - writing final server update
[2024-05-16 17:52:29] 2024-05-16 15:52:05,164 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2988207/.job.ad'
[2024-05-16 17:52:29] 2024-05-16 15:52:05,165 | INFO     | total number of processed events: 1550 (read)
[2024-05-16 17:52:29] 2024-05-16 15:52:05,167 | INFO     | executing command: lscpu
[2024-05-16 17:52:29] 2024-05-16 15:52:05,204 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-05-16 17:52:29] 2024-05-16 15:52:05,205 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 17:52:29] 2024-05-16 15:52:05,229 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 17:52:29] 2024-05-16 15:52:08,212 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-16 17:52:29] 2024-05-16 15:52:08,212 | INFO     | using path: /scratch/boinc/var/slot12/slots/1/PanDA_Pilot-6201812873/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 17:52:29] 2024-05-16 15:52:08,213 | INFO     | extracted standard info from prmon json
[2024-05-16 17:52:29] 2024-05-16 15:52:08,216 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 17:52:29] 2024-05-16 15:52:08,216 | WARNING  | GPU info not found in prmon json
[2024-05-16 17:52:29] 2024-05-16 15:52:08,230 | INFO     | fitting pss+swap vs Time
[2024-05-16 17:52:29] 2024-05-16 15:52:08,232 | INFO     | model: linear, x: [1715795633.0, 1715795694.0, 1715795755.0, 1715795816.0, 1715795877.0, 1715795938.0, 1715795999.0, 1715796060.0, 1715796121.0, 1715796182.0, 1715
[2024-05-16 17:52:29] 2024-05-16 15:52:08,232 | INFO     | sum of square deviations: 676547174450.9805
[2024-05-16 17:52:29] 2024-05-16 15:52:08,255 | INFO     | sum of deviations: 2695063811955.2173
[2024-05-16 17:52:29] 2024-05-16 15:52:08,255 | INFO     | mean x: 1715835161.003855
[2024-05-16 17:52:29] 2024-05-16 15:52:08,256 | INFO     | mean y: 2621575.3569776407
[2024-05-16 17:52:29] 2024-05-16 15:52:08,256 | INFO     | -- intersect: -6832504524.244963
[2024-05-16 17:52:29] 2024-05-16 15:52:08,256 | INFO     | intersect: -6832504524.244963
[2024-05-16 17:52:29] 2024-05-16 15:52:08,257 | INFO     | chi2: 13.936968079674383
[2024-05-16 17:52:29] 2024-05-16 15:52:08,257 | INFO     | model: linear, x: [1715795633.0, 1715795694.0, 1715795755.0, 1715795816.0, 1715795877.0, 1715795938.0, 1715795999.0, 1715796060.0, 1715796121.0, 1715796182.0, 1715
[2024-05-16 17:52:29] 2024-05-16 15:52:08,258 | INFO     | sum of square deviations: 668752927510.981
[2024-05-16 17:52:29] 2024-05-16 15:52:08,281 | INFO     | sum of deviations: 3080028096834.5996
[2024-05-16 17:52:29] 2024-05-16 15:52:08,281 | INFO     | mean x: 1715835008.50387
[2024-05-16 17:52:29] 2024-05-16 15:52:08,281 | INFO     | mean y: 2629108.17879257
[2024-05-16 17:52:29] 2024-05-16 15:52:08,281 | INFO     | -- intersect: -7899870930.802459
[2024-05-16 17:52:29] 2024-05-16 15:52:08,281 | INFO     | intersect: -7899870930.802459
[2024-05-16 17:52:29] 2024-05-16 15:52:08,282 | INFO     | chi2: 11.087843533308028
[2024-05-16 17:52:29] 2024-05-16 15:52:08,282 | INFO     | current chi2=11.087843533308028 (change=20.442929409600257 %)
[2024-05-16 17:52:29] 2024-05-16 15:52:08,282 | INFO     | right removable region: 1291
[2024-05-16 17:52:29] 2024-05-16 15:52:08,283 | INFO     | model: linear, x: [1715795938.0, 1715795999.0, 1715796060.0, 1715796121.0, 1715796182.0, 1715796243.0, 1715796304.0, 1715796365.0, 1715796426.0, 1715796487.0, 1715
[2024-05-16 17:52:29] 2024-05-16 15:52:08,284 | INFO     | sum of square deviations: 668752924460.981
[2024-05-16 17:52:29] 2024-05-16 15:52:08,307 | INFO     | sum of deviations: 2307399011205.714
[2024-05-16 17:52:29] 2024-05-16 15:52:08,307 | INFO     | mean x: 1715835313.50387
[2024-05-16 17:52:29] 2024-05-16 15:52:08,307 | INFO     | mean y: 2629157.9574303403
[2024-05-16 17:52:29] 2024-05-16 15:52:08,307 | INFO     | -- intersect: -5917519466.382043
[2024-05-16 17:52:29] 2024-05-16 15:52:08,307 | INFO     | intersect: -5917519466.382043
[2024-05-16 17:52:29] 2024-05-16 15:52:08,308 | INFO     | chi2: 11.036284071090176
[2024-05-16 17:52:29] 2024-05-16 15:52:08,308 | INFO     | current chi2=11.036284071090176 (change=20.81287688973438 %)
[2024-05-16 17:52:29] 2024-05-16 15:52:08,308 | INFO     | left removable region: 10
[2024-05-16 17:52:29] 2024-05-16 15:52:08,309 | INFO     | model: linear, x: [1715796243.0, 1715796304.0, 1715796365.0, 1715796426.0, 1715796487.0, 1715796548.0, 1715796609.0, 1715796670.0, 1715796731.0, 1715796792.0, 1715
[2024-05-16 17:52:29] 2024-05-16 15:52:08,309 | INFO     | sum of square deviations: 651816782102.98
[2024-05-16 17:52:29] 2024-05-16 15:52:08,332 | INFO     | sum of deviations: 2464750789482.6323
[2024-05-16 17:52:29] 2024-05-16 15:52:08,332 | INFO     | mean x: 1715835283.0039032
[2024-05-16 17:52:29] 2024-05-16 15:52:08,336 | INFO     | mean y: 2645014.274004684
[2024-05-16 17:52:29] 2024-05-16 15:52:08,336 | WARNING  | process 3106859 is no longer using CPU - aborting
[2024-05-16 17:52:29] 2024-05-16 15:52:08,337 | INFO     | -- intersect: -6485537684.492216
[2024-05-16 17:52:29] 2024-05-16 15:52:08,337 | INFO     | will not send any job update
[2024-05-16 17:52:29] 2024-05-16 15:52:08,337 | INFO     | intersect: -6485537684.492216
[2024-05-16 17:52:29] 2024-05-16 15:52:08,338 | INFO     | chi2: 5.462786752586332
[2024-05-16 17:52:29] 2024-05-16 15:52:08,338 | INFO     | -- intersect: -6485537684.492216
[2024-05-16 17:52:29] 2024-05-16 15:52:08,338 | INFO     | current memory leak: 3.78 B/s (using 1281 data points, chi2=5.46)
[2024-05-16 17:52:29] 2024-05-16 15:52:08,339 | INFO     | ..............................
[2024-05-16 17:52:29] 2024-05-16 15:52:08,339 | INFO     | . Timing measurements:
[2024-05-16 17:52:29] 2024-05-16 15:52:08,339 | INFO     | . get job = 0 s
[2024-05-16 17:52:29] 2024-05-16 15:52:08,339 | INFO     | . initial setup = 1 s
[2024-05-16 17:52:29] 2024-05-16 15:52:08,339 | INFO     | . payload setup = 6 s
[2024-05-16 17:52:29] 2024-05-16 15:52:08,339 | INFO     | . stage-in = 0 s
[2024-05-16 17:52:29] 2024-05-16 15:52:08,339 | INFO     | . payload execution = 79090 s
[2024-05-16 17:52:29] 2024-05-16 15:52:08,339 | INFO     | . stage-out = 2 s
[2024-05-16 17:52:29] 2024-05-16 15:52:08,339 | INFO     | . log creation = 0 s
[2024-05-16 17:52:29] 2024-05-16 15:52:08,339 | INFO     | ..............................
[2024-05-16 17:52:29] 2024-05-16 15:52:08,397 | INFO     | 
[2024-05-16 17:52:29] 2024-05-16 15:52:08,397 | INFO     | job summary report
[2024-05-16 17:52:29] 2024-05-16 15:52:08,397 | INFO     | --------------------------------------------------
[2024-05-16 17:52:29] 2024-05-16 15:52:08,397 | INFO     | PanDA job id: 6201812873
[2024-05-16 17:52:29] 2024-05-16 15:52:08,397 | INFO     | task id: 38734053
[2024-05-16 17:52:29] 2024-05-16 15:52:08,397 | INFO     | errors: (none)
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | pilot state: finished 
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | transexitcode: 0
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | exeerrorcode: 0
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | exeerrordiag: 
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | exitcode: 0
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | exitmsg: OK
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | cpuconsumptiontime: 308599 s
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | nevents: 1550
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | neventsw: 0
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | pid: 3106859
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | pgrp: 3106859
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | corecount: 4
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | event service: False
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | sizes: {0: 2392480, 1: 2392679, 4: 2392885, 11: 2392913, 79101: 2473022, 79103: 2482184, 79107: 2482350}
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | --------------------------------------------------
[2024-05-16 17:52:29] 2024-05-16 15:52:08,398 | INFO     | 
[2024-05-16 17:52:29] 2024-05-16 15:52:08,399 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/1
[2024-05-16 17:52:29] 2024-05-16 15:52:08,412 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,412 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,412 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,412 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,412 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,412 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,412 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,412 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | job 6201812873 has completed (purged errors)
[2024-05-16 17:52:29] 2024-05-16 15:52:08,413 | INFO     | overall cleanup function is called
[2024-05-16 17:52:29] 2024-05-16 15:52:09,422 | INFO     | --- collectZombieJob: --- 10, [3106859]
[2024-05-16 17:52:29] 2024-05-16 15:52:09,422 | INFO     | zombie collector waiting for pid 3106859
[2024-05-16 17:52:29] 2024-05-16 15:52:09,422 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 17:52:29] 2024-05-16 15:52:10,427 | INFO     | collected zombie processes
[2024-05-16 17:52:29] 2024-05-16 15:52:10,428 | INFO     | will now attempt to kill all subprocesses of pid=3106859
[2024-05-16 17:52:29] 2024-05-16 15:52:10,545 | INFO     | process IDs to be killed: [3106859] (in reverse order)
[2024-05-16 17:52:29] 2024-05-16 15:52:10,633 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 17:52:29] 2024-05-16 15:52:10,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 17:52:29] 2024-05-16 15:52:10,638 | INFO     | did not find any defunct processes belonging to 3106859
[2024-05-16 17:52:29] 2024-05-16 15:52:10,642 | INFO     | did not find any defunct processes belonging to 3106859
[2024-05-16 17:52:29] 2024-05-16 15:52:10,642 | INFO     | ready for new job
[2024-05-16 17:52:29] 2024-05-16 15:52:10,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 17:52:29] 2024-05-16 15:52:10,647 | INFO     | *************************************
[2024-05-16 17:52:29] 2024-05-16 15:52:10,647 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 17:52:29] 2024-05-16 15:52:10,647 | INFO     | *************************************
[2024-05-16 17:52:29] 2024-05-16 15:52:10,647 | INFO     | 
[2024-05-16 17:52:29] 2024-05-16 15:52:10,649 | INFO     | architecture information:
[2024-05-16 17:52:29] 2024-05-16 15:52:10,649 | INFO     | executing command: cat /etc/os-release
[2024-05-16 17:52:29] 2024-05-16 15:52:10,663 | INFO     | cat /etc/os-release:
[2024-05-16 17:52:29] NAME="CentOS Linux"
[2024-05-16 17:52:29] VERSION="7 (Core)"
[2024-05-16 17:52:29] ID="centos"
[2024-05-16 17:52:29] ID_LIKE="rhel fedora"
[2024-05-16 17:52:29] VERSION_ID="7"
[2024-05-16 17:52:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 17:52:29] ANSI_COLOR="0;31"
[2024-05-16 17:52:29] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 17:52:29] HOME_URL="https://www.centos.org/"
[2024-05-16 17:52:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 17:52:29] 
[2024-05-16 17:52:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 17:52:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 17:52:29] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 17:52:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 17:52:29] 
[2024-05-16 17:52:29] 2024-05-16 15:52:10,663 | INFO     | *************************************
[2024-05-16 17:52:29] 2024-05-16 15:52:11,166 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/1
[2024-05-16 17:52:29] 2024-05-16 15:52:11,184 | INFO     | sufficient remaining disk space (1605535531008 B)
[2024-05-16 17:52:29] 2024-05-16 15:52:11,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 17:52:29] 2024-05-16 15:52:11,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 17:52:29] 2024-05-16 15:52:11,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 17:52:29] 2024-05-16 15:52:11,185 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 17:52:29] 2024-05-16 15:52:11,186 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 17:52:29] 2024-05-16 15:52:11,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 17:52:29] 2024-05-16 15:52:11,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 17:52:29] 2024-05-16 15:52:11,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 17:52:29] 2024-05-16 15:52:11,444 | INFO     | all data control threads have been joined
[2024-05-16 17:52:29] 2024-05-16 15:52:11,537 | INFO     | all payload control threads have been joined
[2024-05-16 17:52:29] 2024-05-16 15:52:11,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:52:29] 2024-05-16 15:52:11,845 | INFO     | aborting loop
[2024-05-16 17:52:29] 2024-05-16 15:52:12,190 | INFO     | [job] retrieve thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:12,448 | INFO     | all job control threads have been joined
[2024-05-16 17:52:29] 2024-05-16 15:52:12,449 | INFO     | [data] control thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:12,542 | INFO     | [payload] control thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:12,796 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:12,846 | INFO     | [job] job monitor thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:13,027 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:13,027 | INFO     | [data] copytool_in thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:13,124 | INFO     | [payload] failed_post thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:13,190 | INFO     | [data] copytool_out thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:13,407 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 17:52:29] 2024-05-16 15:52:13,452 | INFO     | [job] validate thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:13,453 | INFO     | [job] control thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:13,454 | INFO     | [payload] validate_post thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:13,527 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:14,412 | INFO     | [job] queue monitor thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:15,192 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:21,602 | INFO     | job.realtimelogging is not enabled
[2024-05-16 17:52:29] 2024-05-16 15:52:22,605 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 17:52:29] 2024-05-16 15:52:24,039 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47519995159616)>', '<ExcThread(monitor, started 47520168511232)>']
[2024-05-16 17:52:29] 2024-05-16 15:52:24,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 17:52:29] 2024-05-16 15:52:24,250 | INFO     | [monitor] control thread has ended
[2024-05-16 17:52:29] 2024-05-16 15:52:29,064 | INFO     | all workflow threads have been joined
[2024-05-16 17:52:29] 2024-05-16 15:52:29,064 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 17:52:29] 2024-05-16 15:52:29,065 | INFO     | traces error code: 0
[2024-05-16 17:52:29] 2024-05-16 15:52:29,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 17:52:29] 2024-05-16 15:52:29,122 [wrapper] ==== pilot stdout END ====
[2024-05-16 17:52:29] 2024-05-16 15:52:29,125 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 17:52:29] 2024-05-16 15:52:29,127 [wrapper] pilotpid: 3099297
[2024-05-16 17:52:29] 2024-05-16 15:52:29,129 [wrapper] Pilot exit status: 0
[2024-05-16 17:52:29] 2024-05-16 15:52:29,135 [wrapper] pandaids: 6201812873
[2024-05-16 17:52:29] 2024-05-16 15:52:29,177 [wrapper] cleanup: SIGTERM to supervisor_pilot 1067963 3099298
[2024-05-16 17:52:29] 2024-05-16 15:52:29,180 [wrapper] Test setup, not cleaning
[2024-05-16 17:52:29] 2024-05-16 15:52:29,182 [wrapper] ==== wrapper stdout END ====
[2024-05-16 17:52:29] 2024-05-16 15:52:29,185 [wrapper] ==== wrapper stderr END ====
[2024-05-16 17:52:29] 2024-05-16 15:52:29,190 [wrapper] apfmon messages muted
[2024-05-16 17:52:29]  *** Error codes and diagnostics ***
[2024-05-16 17:52:29]     "exeErrorCode": 0,
[2024-05-16 17:52:29]     "exeErrorDiag": "",
[2024-05-16 17:52:29]     "pilotErrorCode": 0,
[2024-05-16 17:52:29]     "pilotErrorDiag": "",
[2024-05-16 17:52:29]  *** Listing of results directory ***
[2024-05-16 17:52:29] total 1286048
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc    467845 May 10 20:34 pilot3.tar.gz
[2024-05-16 17:52:29] -rwx------ 1 boinc boinc     32251 May 10 20:36 runpilot2-wrapper.sh
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc      5633 May 10 20:36 queuedata.json
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc       100 May 15 19:11 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 17:52:29] -rwxr-xr-x 1 boinc boinc      7986 May 15 19:11 run_atlas
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc       105 May 15 19:11 job.xml
[2024-05-16 17:52:29] -rw-r--r-- 2 boinc boinc 329200762 May 15 19:53 EVNT.38734051._000663.pool.root.1
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc      6457 May 15 19:53 init_data.xml
[2024-05-16 17:52:29] drwxrwx--x 2 boinc boinc      4096 May 15 19:53 shared
[2024-05-16 17:52:29] -rw-r--r-- 2 boinc boinc    480164 May 15 19:53 input.tar.gz
[2024-05-16 17:52:29] -rw-r--r-- 2 boinc boinc     17537 May 15 19:53 start_atlas.sh
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc         0 May 15 19:53 boinc_lockfile
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc      2853 May 15 19:53 pandaJob.out
[2024-05-16 17:52:29] -rw------- 1 boinc boinc       424 May 15 19:53 setup.sh.local
[2024-05-16 17:52:29] -rw------- 1 boinc boinc   1011265 May 15 19:53 agis_schedconf.cvmfs.json
[2024-05-16 17:52:29] -rw------- 1 boinc boinc   1324701 May 15 19:53 cric_ddmendpoints.json
[2024-05-16 17:52:29] drwx------ 4 boinc boinc      4096 May 15 19:53 pilot3
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc       533 May 16 17:43 boinc_task_state.xml
[2024-05-16 17:52:29] -rw------- 1 boinc boinc 951006261 May 16 17:51 HITS.38734053._005328.pool.root.1
[2024-05-16 17:52:29] -rw------- 1 boinc boinc        95 May 16 17:51 pilot_heartbeat.json
[2024-05-16 17:52:29] -rw------- 1 boinc boinc      1062 May 16 17:51 memory_monitor_summary.json
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc        29 May 16 17:52 wrapper_checkpoint.txt
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc      8192 May 16 17:52 boinc_mmap_file
[2024-05-16 17:52:29] -rw------- 1 boinc boinc         0 May 16 17:52 agis_ddmendpoints.agis.ALL.json
[2024-05-16 17:52:29] -rw------- 1 boinc boinc   2133338 May 16 17:52 log.38734053._005328.job.log.tgz.1
[2024-05-16 17:52:29] -rw------- 1 boinc boinc     27202 May 16 17:52 heartbeat.json
[2024-05-16 17:52:29] -rw------- 1 boinc boinc      4417 May 16 17:52 pilotlog.txt
[2024-05-16 17:52:29] -rw------- 1 boinc boinc  14435124 May 16 17:52 log.38734053._005328.job.log.1
[2024-05-16 17:52:29] -rw------- 1 boinc boinc       353 May 16 17:52 output.list
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc       620 May 16 17:52 runtime_log
[2024-05-16 17:52:29] -rw------- 1 boinc boinc  16609280 May 16 17:52 result.tar.gz
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc     11410 May 16 17:52 runtime_log.err
[2024-05-16 17:52:29] -rw------- 1 boinc boinc       666 May 16 17:52 NHoMDm6HkP5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmv2FKDmrK8FFo.diag
[2024-05-16 17:52:29] -rw-r--r-- 1 boinc boinc     21632 May 16 17:52 stderr.txt
[2024-05-16 17:52:29] HITS file was successfully produced:
[2024-05-16 17:52:29] -rw------- 1 boinc boinc 951006261 May 16 17:51 shared/HITS.pool.root.1
[2024-05-16 17:52:29]  *** Contents of shared directory: ***
[2024-05-16 17:52:29] total 1266928
[2024-05-16 17:52:29] -rw-r--r-- 2 boinc boinc 329200762 May 15 19:53 ATLAS.root_0
[2024-05-16 17:52:29] -rw-r--r-- 2 boinc boinc    480164 May 15 19:53 input.tar.gz
[2024-05-16 17:52:29] -rw-r--r-- 2 boinc boinc     17537 May 15 19:53 start_atlas.sh
[2024-05-16 17:52:29] -rw------- 1 boinc boinc 951006261 May 16 17:51 HITS.pool.root.1
[2024-05-16 17:52:29] -rw------- 1 boinc boinc  16609280 May 16 17:52 result.tar.gz
17:52:31 (3094749): run_atlas exited; CPU time 306744.831135
17:52:31 (3094749): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN