| Name | WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo_0 |
| Workunit | 222912313 |
| Created | 10 May 2024, 18:01:43 UTC |
| Sent | 2 Jun 2024, 11:03:02 UTC |
| Report deadline | 3 Oct 2024, 5:58:56 UTC |
| Received | 18 May 2024, 13:18:25 UTC |
| Server state | In progress |
| Outcome | Success |
| Client state | Compute error |
| Exit status | 195 (0x000000C3) EXIT_CHILD_FAILED |
| Computer ID | 10689036 |
| Run time | 8 hours 48 min 37 sec |
| CPU time | 1 days 8 hours 24 min 9 sec |
| Validate state | Initial |
| Credit | 0.00 |
| Device peak FLOPS | 18.94 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.87 GB |
| Peak swap size | 37.72 GB |
| Peak disk usage | 1.18 GB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
09:32:03 (1501712): wrapper (7.7.26015): starting
09:32:03 (1501712): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 09:32:03] Arguments: --nthreads 4
[2024-05-17 09:32:03] Threads: 4
[2024-05-17 09:32:03] Checking for CVMFS
[2024-05-17 09:32:03] No cvmfs_config command found, will try listing directly
[2024-05-17 09:32:03] CVMFS is ok
[2024-05-17 09:32:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 09:32:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 09:32:03] Further information can be found at the LHC@home message board.
[2024-05-17 09:32:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 09:32:03] Checking for apptainer binary...
[2024-05-17 09:32:03] which: no apptainer in ((null))
[2024-05-17 09:32:03] apptainer is not installed, using version from CVMFS
[2024-05-17 09:32:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 09:32:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-17 09:32:04] apptainer works
[2024-05-17 09:32:04] Set ATHENA_PROC_NUMBER=4
[2024-05-17 09:32:04] Set ATHENA_CORE_NUMBER=4
[2024-05-17 09:32:04] Starting ATLAS job with PandaID=6201788873
[2024-05-17 09:32:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:01:40 (1507472): wrapper (7.7.26015): starting
22:01:40 (1507472): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 22:01:40] Arguments: --nthreads 4
[2024-05-17 22:01:40] Threads: 4
[2024-05-17 22:01:40] This job has been restarted, cleaning up previous attempt
[2024-05-17 22:01:41] Checking for CVMFS
[2024-05-17 22:01:41] No cvmfs_config command found, will try listing directly
[2024-05-17 22:01:41] CVMFS is ok
[2024-05-17 22:01:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 22:01:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 22:01:41] Further information can be found at the LHC@home message board.
[2024-05-17 22:01:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 22:01:41] Checking for apptainer binary...
[2024-05-17 22:01:41] which: no apptainer in ((null))
[2024-05-17 22:01:41] apptainer is not installed, using version from CVMFS
[2024-05-17 22:01:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 22:01:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-17 22:01:42] apptainer works
[2024-05-17 22:01:42] Set ATHENA_PROC_NUMBER=4
[2024-05-17 22:01:42] Set ATHENA_CORE_NUMBER=4
[2024-05-17 22:01:42] Starting ATLAS job with PandaID=6201788873
[2024-05-17 22:01:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 22:04:51] Job failed
[2024-05-17 22:04:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-17 22:04:51] ++ pwd
[2024-05-17 22:04:51] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot92/slots/1/
[2024-05-17 22:04:51] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot92/slots/1/
[2024-05-17 22:04:51] + mv ATLAS.root_0 EVNT.38734051._000907.pool.root.1
[2024-05-17 22:04:51] mv: 'ATLAS.root_0' and 'EVNT.38734051._000907.pool.root.1' are the same file
[2024-05-17 22:04:51] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-17 22:04:51] + umask 077
[2024-05-17 22:04:51] ++ date +%s
[2024-05-17 22:04:51] + ACCOUNTING_STARTTIME=1715976102
[2024-05-17 22:04:51] + echo 'Detecting resource accounting method available for the job.'
[2024-05-17 22:04:51] Detecting resource accounting method available for the job.
[2024-05-17 22:04:51] + JOB_ACCOUNTING=
[2024-05-17 22:04:51] + command -v arc-job-cgroup
[2024-05-17 22:04:51] + '[' -z '' ']'
[2024-05-17 22:04:51] + GNU_TIME=/usr/bin/time
[2024-05-17 22:04:51] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-17 22:04:51] Looking for /usr/bin/time tool for accounting measurements
[2024-05-17 22:04:51] + '[' '!' -z /usr/bin/time ']'
[2024-05-17 22:04:51] + /usr/bin/time --version
[2024-05-17 22:04:51] + echo 'GNU time found and will be used for job accounting.'
[2024-05-17 22:04:51] GNU time found and will be used for job accounting.
[2024-05-17 22:04:51] + JOB_ACCOUNTING=gnutime
[2024-05-17 22:04:51] + '[' -z gnutime ']'
[2024-05-17 22:04:51] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-17 22:04:51] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-17 22:04:51] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-10/BOINC_MCORE/6201788873.out
[2024-05-17 22:04:51] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-10/BOINC_MCORE/6201788873.out
[2024-05-17 22:04:51] + export PILOT_NOKILL=YES
[2024-05-17 22:04:51] + PILOT_NOKILL=YES
[2024-05-17 22:04:51] + export GRID_GLOBAL_JOBID=WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-17 22:04:51] + GRID_GLOBAL_JOBID=WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-17 22:04:51] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-17 22:04:51] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-17 22:04:51] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-17 22:04:51] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-17 22:04:51] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-17 22:04:51] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-17 22:04:51] ++ pwd
[2024-05-17 22:04:51] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot92/slots/1
[2024-05-17 22:04:51] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-17 22:04:51] ++ pwd
[2024-05-17 22:04:51] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot92/slots/1/log.38734053._004948.job.log.1
[2024-05-17 22:04:51] ++ pwd
[2024-05-17 22:04:51] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot92/slots/1/log.38734053._004948.job.log.1
[2024-05-17 22:04:51] ++ pwd
[2024-05-17 22:04:51] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot92/slots/1.diag
[2024-05-17 22:04:51] + '[' '!' -z '' ']'
[2024-05-17 22:04:51] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-17 22:04:51] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-17 22:04:51] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-17 22:04:51] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-17 22:04:51] + '[' '!' -z '' ']'
[2024-05-17 22:04:51] + '[' -z yes ']'
[2024-05-17 22:04:51] ++ pwd
[2024-05-17 22:04:51] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag
[2024-05-17 22:04:51] + runtimeenvironments=
[2024-05-17 22:04:51] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-17 22:04:51] + RTE_function_0 1
[2024-05-17 22:04:51] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-17 22:04:51] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-17 22:04:51] + export BOINC_APP=ATLAS
[2024-05-17 22:04:51] + BOINC_APP=ATLAS
[2024-05-17 22:04:51] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-17 22:04:51] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-17 22:04:51] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-17 22:04:51] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-17 22:04:51] + '[' -z 1 ']'
[2024-05-17 22:04:51] + '[' 1 == 1 ']'
[2024-05-17 22:04:51] + shift
[2024-05-17 22:04:51] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-17 22:04:51] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-17 22:04:51] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-17 22:04:51] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot92/slots/1/
[2024-05-17 22:04:51] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot92/slots/1/
[2024-05-17 22:04:51] + '[' -e /scratch/boinc/var/slot92/slots/1/init_data.xml ']'
[2024-05-17 22:04:51] + grep '<use_http_proxy/>' /scratch/boinc/var/slot92/slots/1/init_data.xml
[2024-05-17 22:04:51] + '[' -e /scratch/boinc/var/slot92/slots/1/init_data.xml ']'
[2024-05-17 22:04:51] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot92/slots/1/init_data.xml
[2024-05-17 22:04:51] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-17 22:04:51] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-17 22:04:51] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-17 22:04:51] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-17 22:04:51] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-17 22:04:51] + '[' 0 -ne 0 ']'
[2024-05-17 22:04:51] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-17 22:04:51] + '[' -f /etc/os-release ']'
[2024-05-17 22:04:51] +++ cat /etc/os-release
[2024-05-17 22:04:51] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-17 22:04:51] +++ NAME='CentOS Linux'
[2024-05-17 22:04:51] +++ VERSION='7 (Core)'
[2024-05-17 22:04:51] +++ ID=centos
[2024-05-17 22:04:51] +++ ID_LIKE='rhel fedora'
[2024-05-17 22:04:51] +++ VERSION_ID=7
[2024-05-17 22:04:51] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-17 22:04:51] +++ ANSI_COLOR='0;31'
[2024-05-17 22:04:51] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-17 22:04:51] +++ HOME_URL=https://www.centos.org/
[2024-05-17 22:04:51] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-17 22:04:51] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-17 22:04:51] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-17 22:04:51] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-17 22:04:51] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-17 22:04:51] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-17 22:04:51] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-17 22:04:51] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-17 22:04:51] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-17 22:04:51] + HOME=/scratch/boinc/var/slot92/slots/1
[2024-05-17 22:04:51] + export HOME
[2024-05-17 22:04:51] + cd /scratch/boinc/var/slot92/slots/1
[2024-05-17 22:04:51] + '[' '!' -z '' ']'
[2024-05-17 22:04:51] + '[' -z '' ']'
[2024-05-17 22:04:51] ++ /bin/hostname -f
[2024-05-17 22:04:51] + nodename=skurut14.grid.cesnet.cz
[2024-05-17 22:04:51] + echo nodename=skurut14.grid.cesnet.cz
[2024-05-17 22:04:51] + echo Processors=1
[2024-05-17 22:04:51] + echo Benchmark=HEPSPEC:1.0
[2024-05-17 22:04:51] + executable=./runpilot2-wrapper.sh
[2024-05-17 22:04:51] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-17 22:04:51] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-17 22:04:51] ++ head -n 1
[2024-05-17 22:04:51] ++ tr -d '\0'
[2024-05-17 22:04:51] + line1='#!/bin/bash'
[2024-05-17 22:04:51] ++ echo '#!/bin/bash'
[2024-05-17 22:04:51] ++ sed -n 's/^#! *//p'
[2024-05-17 22:04:51] + shebang=/bin/bash
[2024-05-17 22:04:51] ++ echo /bin/bash
[2024-05-17 22:04:51] ++ awk '{print $1}'
[2024-05-17 22:04:51] + interpreter=/bin/bash
[2024-05-17 22:04:51] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-17 22:04:51] + '[' x/bin/bash = x ']'
[2024-05-17 22:04:51] + type /bin/bash
[2024-05-17 22:04:51] + '[' xgnutime = xgnutime ']'
[2024-05-17 22:04:51] + /usr/bin/time -o /scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-17 22:04:51] + RESULT=2
[2024-05-17 22:04:51] + sed -i -e /nodename=/d /scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag
[2024-05-17 22:04:51] ++ grep domain_name init_data.xml
[2024-05-17 22:04:51] ++ awk -F '>' '{print $2}'
[2024-05-17 22:04:51] ++ awk -F '<' '{print $1}'
[2024-05-17 22:04:51] ++ sed -e 's# #_#g'
[2024-05-17 22:04:51] + hostname=skurut14.grid.cesnet.cz
[2024-05-17 22:04:51] ++ grep user_name init_data.xml
[2024-05-17 22:04:51] ++ awk -F '>' '{print $2}'
[2024-05-17 22:04:51] ++ awk -F '<' '{print $1}'
[2024-05-17 22:04:51] ++ sed -e 's# #_#g'
[2024-05-17 22:04:51] + username=praguelcg2
[2024-05-17 22:04:51] + nodename=praguelcg2@skurut14.grid.cesnet.cz
[2024-05-17 22:04:51] + echo nodename=praguelcg2@skurut14.grid.cesnet.cz
[2024-05-17 22:04:51] + '[' -n 4 ']'
[2024-05-17 22:04:51] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag
[2024-05-17 22:04:51] + echo exitcode=2
[2024-05-17 22:04:51] + runtimeenvironments=
[2024-05-17 22:04:51] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-17 22:04:51] + RTE_function_0 2
[2024-05-17 22:04:51] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-17 22:04:51] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-17 22:04:51] + export BOINC_APP=ATLAS
[2024-05-17 22:04:51] + BOINC_APP=ATLAS
[2024-05-17 22:04:51] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-17 22:04:51] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-17 22:04:51] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-17 22:04:51] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-17 22:04:51] + '[' -z 2 ']'
[2024-05-17 22:04:51] + '[' 2 == 1 ']'
[2024-05-17 22:04:51] + '[' 0 -ne 0 ']'
[2024-05-17 22:04:51] + echo 'zip all output files'
[2024-05-17 22:04:51] + flist='*.diag '
[2024-05-17 22:04:51] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-17 22:04:51] + '[' -e ./heartbeat.json ']'
[2024-05-17 22:04:51] + flist='*.diag ./heartbeat.json'
[2024-05-17 22:04:51] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-17 22:04:51] + '[' -e ./output.list ']'
[2024-05-17 22:04:51] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-17 22:04:51] + '[' -e ./log.38734053._004948.job.log.1 ']'
[2024-05-17 22:04:51] + flist='*.diag ./heartbeat.json ./log.38734053._004948.job.log.1'
[2024-05-17 22:04:51] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-17 22:04:51] + '[' -e ./log.38734053._004948.job.log.1 ']'
[2024-05-17 22:04:51] + flist='*.diag ./heartbeat.json ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1'
[2024-05-17 22:04:51] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-17 22:04:51] + '[' -e ./gmlog/ ']'
[2024-05-17 22:04:51] + '[' -f output.list ']'
[2024-05-17 22:04:51] + tar cvf result.tar.gz WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag ./heartbeat.json ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1
[2024-05-17 22:04:51] + '[' xgnutime = xcgroup ']'
[2024-05-17 22:04:51] + '[' -n '' ']'
[2024-05-17 22:04:51] + '[' -n '' ']'
[2024-05-17 22:04:51] ++ date +%s
[2024-05-17 22:04:51] + ACCOUNTING_ENDTIME=1715976290
[2024-05-17 22:04:51] ++ date -d '1970-01-01 UTC 1715976102 seconds' +%Y%m%d%H%M%SZ
[2024-05-17 22:04:51] + echo LRMSStartTime=20240517220142Z
[2024-05-17 22:04:51] ++ date -d '1970-01-01 UTC 1715976290 seconds' +%Y%m%d%H%M%SZ
[2024-05-17 22:04:51] + echo LRMSEndTime=20240517220450Z
[2024-05-17 22:04:51] + echo walltime=188
[2024-05-17 22:04:51] + echo exitcode=2
[2024-05-17 22:04:51] + exit 2
[2024-05-17 22:04:51] ./log.38734053._004948.job.log.1
[2024-05-17 22:04:51] ./runtime_log
[2024-05-17 22:04:51] ./runtime_log.err
[2024-05-17 22:04:51] ./PanDA_Pilot-6201788873/log.EVNTtoHITS
[2024-05-17 22:04:51] ./PanDA_Pilot-6201788873/PoolFileCatalog.xml.AthenaMP-saved
[2024-05-17 22:04:51] ./PanDA_Pilot-6201788873/prmon.log
[2024-05-17 22:04:51] ./PanDA_Pilot-6201788873/PoolFileCatalog.xml.BAK
[2024-05-17 22:04:51] ./PanDA_Pilot-6201788873/PoolFileCatalog.xml
[2024-05-17 22:04:51] ./PanDA_Pilot-6201788873/pilotlog.txt
[2024-05-17 22:04:51] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-17 22:04:51] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-17 22:04:51] ./pilot3/pilot/util/realtimelogger.py
[2024-05-17 22:04:51] ./pilot3/pilot/util/loggingsupport.py
[2024-05-17 22:04:51] ./pilotlog.txt
03:32:06 (2819678): wrapper (7.7.26015): starting
03:32:06 (2819678): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 03:32:06] Arguments: --nthreads 4
[2024-05-18 03:32:06] Threads: 4
[2024-05-18 03:32:06] This job has been restarted, cleaning up previous attempt
[2024-05-18 03:32:06] Checking for CVMFS
[2024-05-18 03:32:06] No cvmfs_config command found, will try listing directly
[2024-05-18 03:32:06] CVMFS is ok
[2024-05-18 03:32:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 03:32:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 03:32:06] Further information can be found at the LHC@home message board.
[2024-05-18 03:32:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 03:32:06] Checking for apptainer binary...
[2024-05-18 03:32:06] which: no apptainer in ((null))
[2024-05-18 03:32:06] apptainer is not installed, using version from CVMFS
[2024-05-18 03:32:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 03:32:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-18 03:32:07] apptainer works
[2024-05-18 03:32:07] Set ATHENA_PROC_NUMBER=4
[2024-05-18 03:32:07] Set ATHENA_CORE_NUMBER=4
[2024-05-18 03:32:07] Starting ATLAS job with PandaID=6201788873
[2024-05-18 03:32:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:38:04 (518771): wrapper (7.7.26015): starting
11:38:04 (518771): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 11:38:04] Arguments: --nthreads 4
[2024-05-18 11:38:04] Threads: 4
[2024-05-18 11:38:04] This job has been restarted, cleaning up previous attempt
[2024-05-18 11:38:04] Checking for CVMFS
[2024-05-18 11:38:04] No cvmfs_config command found, will try listing directly
[2024-05-18 11:38:04] CVMFS is ok
[2024-05-18 11:38:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 11:38:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 11:38:04] Further information can be found at the LHC@home message board.
[2024-05-18 11:38:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 11:38:04] Checking for apptainer binary...
[2024-05-18 11:38:04] which: no apptainer in ((null))
[2024-05-18 11:38:04] apptainer is not installed, using version from CVMFS
[2024-05-18 11:38:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 11:38:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-18 11:38:05] apptainer works
[2024-05-18 11:38:05] Set ATHENA_PROC_NUMBER=4
[2024-05-18 11:38:05] Set ATHENA_CORE_NUMBER=4
[2024-05-18 11:38:05] Starting ATLAS job with PandaID=6201788873
[2024-05-18 11:38:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 11:41:15] Job failed
[2024-05-18 11:41:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-18 11:41:15] ++ pwd
[2024-05-18 11:41:15] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot92/slots/1/
[2024-05-18 11:41:15] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot92/slots/1/
[2024-05-18 11:41:15] + mv ATLAS.root_0 EVNT.38734051._000907.pool.root.1
[2024-05-18 11:41:15] mv: 'ATLAS.root_0' and 'EVNT.38734051._000907.pool.root.1' are the same file
[2024-05-18 11:41:15] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-18 11:41:15] + umask 077
[2024-05-18 11:41:15] ++ date +%s
[2024-05-18 11:41:15] + ACCOUNTING_STARTTIME=1716025085
[2024-05-18 11:41:15] + echo 'Detecting resource accounting method available for the job.'
[2024-05-18 11:41:15] Detecting resource accounting method available for the job.
[2024-05-18 11:41:15] + JOB_ACCOUNTING=
[2024-05-18 11:41:15] + command -v arc-job-cgroup
[2024-05-18 11:41:15] + '[' -z '' ']'
[2024-05-18 11:41:15] + GNU_TIME=/usr/bin/time
[2024-05-18 11:41:15] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-18 11:41:15] Looking for /usr/bin/time tool for accounting measurements
[2024-05-18 11:41:15] + '[' '!' -z /usr/bin/time ']'
[2024-05-18 11:41:15] + /usr/bin/time --version
[2024-05-18 11:41:15] + echo 'GNU time found and will be used for job accounting.'
[2024-05-18 11:41:15] GNU time found and will be used for job accounting.
[2024-05-18 11:41:15] + JOB_ACCOUNTING=gnutime
[2024-05-18 11:41:15] + '[' -z gnutime ']'
[2024-05-18 11:41:15] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-18 11:41:15] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-18 11:41:15] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-10/BOINC_MCORE/6201788873.out
[2024-05-18 11:41:15] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-10/BOINC_MCORE/6201788873.out
[2024-05-18 11:41:15] + export PILOT_NOKILL=YES
[2024-05-18 11:41:15] + PILOT_NOKILL=YES
[2024-05-18 11:41:15] + export GRID_GLOBAL_JOBID=WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-18 11:41:15] + GRID_GLOBAL_JOBID=WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-18 11:41:15] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-18 11:41:15] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-18 11:41:15] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-18 11:41:15] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-18 11:41:15] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-18 11:41:15] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-18 11:41:15] ++ pwd
[2024-05-18 11:41:15] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot92/slots/1
[2024-05-18 11:41:15] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-18 11:41:15] ++ pwd
[2024-05-18 11:41:15] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot92/slots/1/log.38734053._004948.job.log.1
[2024-05-18 11:41:15] ++ pwd
[2024-05-18 11:41:15] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot92/slots/1/log.38734053._004948.job.log.1
[2024-05-18 11:41:15] ++ pwd
[2024-05-18 11:41:15] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot92/slots/1.diag
[2024-05-18 11:41:15] + '[' '!' -z '' ']'
[2024-05-18 11:41:15] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-18 11:41:15] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-18 11:41:15] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-18 11:41:15] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-18 11:41:15] + '[' '!' -z '' ']'
[2024-05-18 11:41:15] + '[' -z yes ']'
[2024-05-18 11:41:15] ++ pwd
[2024-05-18 11:41:15] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag
[2024-05-18 11:41:15] + runtimeenvironments=
[2024-05-18 11:41:15] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-18 11:41:15] + RTE_function_0 1
[2024-05-18 11:41:15] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 11:41:15] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 11:41:15] + export BOINC_APP=ATLAS
[2024-05-18 11:41:15] + BOINC_APP=ATLAS
[2024-05-18 11:41:15] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 11:41:15] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 11:41:15] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 11:41:15] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 11:41:15] + '[' -z 1 ']'
[2024-05-18 11:41:15] + '[' 1 == 1 ']'
[2024-05-18 11:41:15] + shift
[2024-05-18 11:41:15] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-18 11:41:15] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 11:41:15] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-18 11:41:15] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot92/slots/1/
[2024-05-18 11:41:15] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot92/slots/1/
[2024-05-18 11:41:15] + '[' -e /scratch/boinc/var/slot92/slots/1/init_data.xml ']'
[2024-05-18 11:41:15] + grep '<use_http_proxy/>' /scratch/boinc/var/slot92/slots/1/init_data.xml
[2024-05-18 11:41:15] + '[' -e /scratch/boinc/var/slot92/slots/1/init_data.xml ']'
[2024-05-18 11:41:15] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot92/slots/1/init_data.xml
[2024-05-18 11:41:15] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-18 11:41:15] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 11:41:15] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-18 11:41:15] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 11:41:15] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 11:41:15] + '[' 0 -ne 0 ']'
[2024-05-18 11:41:15] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-18 11:41:15] + '[' -f /etc/os-release ']'
[2024-05-18 11:41:15] +++ cat /etc/os-release
[2024-05-18 11:41:15] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-18 11:41:15] +++ NAME='CentOS Linux'
[2024-05-18 11:41:15] +++ VERSION='7 (Core)'
[2024-05-18 11:41:15] +++ ID=centos
[2024-05-18 11:41:15] +++ ID_LIKE='rhel fedora'
[2024-05-18 11:41:15] +++ VERSION_ID=7
[2024-05-18 11:41:15] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-18 11:41:15] +++ ANSI_COLOR='0;31'
[2024-05-18 11:41:15] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-18 11:41:15] +++ HOME_URL=https://www.centos.org/
[2024-05-18 11:41:15] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-18 11:41:15] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-18 11:41:15] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-18 11:41:15] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-18 11:41:15] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-18 11:41:15] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-18 11:41:15] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-18 11:41:15] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-18 11:41:15] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-18 11:41:15] + HOME=/scratch/boinc/var/slot92/slots/1
[2024-05-18 11:41:15] + export HOME
[2024-05-18 11:41:15] + cd /scratch/boinc/var/slot92/slots/1
[2024-05-18 11:41:15] + '[' '!' -z '' ']'
[2024-05-18 11:41:15] + '[' -z '' ']'
[2024-05-18 11:41:15] ++ /bin/hostname -f
[2024-05-18 11:41:15] + nodename=skurut14.grid.cesnet.cz
[2024-05-18 11:41:15] + echo nodename=skurut14.grid.cesnet.cz
[2024-05-18 11:41:15] + echo Processors=1
[2024-05-18 11:41:15] + echo Benchmark=HEPSPEC:1.0
[2024-05-18 11:41:15] + executable=./runpilot2-wrapper.sh
[2024-05-18 11:41:15] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-18 11:41:15] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-18 11:41:15] ++ head -n 1
[2024-05-18 11:41:15] ++ tr -d '\0'
[2024-05-18 11:41:15] + line1='#!/bin/bash'
[2024-05-18 11:41:15] ++ echo '#!/bin/bash'
[2024-05-18 11:41:15] ++ sed -n 's/^#! *//p'
[2024-05-18 11:41:15] + shebang=/bin/bash
[2024-05-18 11:41:15] ++ echo /bin/bash
[2024-05-18 11:41:15] ++ awk '{print $1}'
[2024-05-18 11:41:15] + interpreter=/bin/bash
[2024-05-18 11:41:15] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-18 11:41:15] + '[' x/bin/bash = x ']'
[2024-05-18 11:41:15] + type /bin/bash
[2024-05-18 11:41:15] + '[' xgnutime = xgnutime ']'
[2024-05-18 11:41:15] + /usr/bin/time -o /scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-18 11:41:15] + RESULT=2
[2024-05-18 11:41:15] + sed -i -e /nodename=/d /scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag
[2024-05-18 11:41:15] ++ grep domain_name init_data.xml
[2024-05-18 11:41:15] ++ awk -F '>' '{print $2}'
[2024-05-18 11:41:15] ++ awk -F '<' '{print $1}'
[2024-05-18 11:41:15] ++ sed -e 's# #_#g'
[2024-05-18 11:41:15] + hostname=skurut14.grid.cesnet.cz
[2024-05-18 11:41:15] ++ grep user_name init_data.xml
[2024-05-18 11:41:15] ++ awk -F '>' '{print $2}'
[2024-05-18 11:41:15] ++ awk -F '<' '{print $1}'
[2024-05-18 11:41:15] ++ sed -e 's# #_#g'
[2024-05-18 11:41:15] + username=praguelcg2
[2024-05-18 11:41:15] + nodename=praguelcg2@skurut14.grid.cesnet.cz
[2024-05-18 11:41:15] + echo nodename=praguelcg2@skurut14.grid.cesnet.cz
[2024-05-18 11:41:15] + '[' -n 4 ']'
[2024-05-18 11:41:15] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag
[2024-05-18 11:41:15] + echo exitcode=2
[2024-05-18 11:41:15] + runtimeenvironments=
[2024-05-18 11:41:15] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-18 11:41:15] + RTE_function_0 2
[2024-05-18 11:41:15] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 11:41:15] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 11:41:15] + export BOINC_APP=ATLAS
[2024-05-18 11:41:15] + BOINC_APP=ATLAS
[2024-05-18 11:41:15] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 11:41:15] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 11:41:15] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 11:41:15] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 11:41:15] + '[' -z 2 ']'
[2024-05-18 11:41:15] + '[' 2 == 1 ']'
[2024-05-18 11:41:15] + '[' 0 -ne 0 ']'
[2024-05-18 11:41:15] + echo 'zip all output files'
[2024-05-18 11:41:15] + flist='*.diag '
[2024-05-18 11:41:15] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-18 11:41:15] + '[' -e ./heartbeat.json ']'
[2024-05-18 11:41:15] + flist='*.diag ./heartbeat.json'
[2024-05-18 11:41:15] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-18 11:41:15] + '[' -e ./output.list ']'
[2024-05-18 11:41:15] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-18 11:41:15] + '[' -e ./log.38734053._004948.job.log.1 ']'
[2024-05-18 11:41:15] + flist='*.diag ./heartbeat.json ./log.38734053._004948.job.log.1'
[2024-05-18 11:41:15] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-18 11:41:15] + '[' -e ./log.38734053._004948.job.log.1 ']'
[2024-05-18 11:41:15] + flist='*.diag ./heartbeat.json ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1'
[2024-05-18 11:41:15] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-18 11:41:15] + '[' -e ./gmlog/ ']'
[2024-05-18 11:41:15] + '[' -f output.list ']'
[2024-05-18 11:41:15] + tar cvf result.tar.gz WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag ./heartbeat.json ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1
[2024-05-18 11:41:15] + '[' xgnutime = xcgroup ']'
[2024-05-18 11:41:15] + '[' -n '' ']'
[2024-05-18 11:41:15] + '[' -n '' ']'
[2024-05-18 11:41:15] ++ date +%s
[2024-05-18 11:41:15] + ACCOUNTING_ENDTIME=1716025274
[2024-05-18 11:41:15] ++ date -d '1970-01-01 UTC 1716025085 seconds' +%Y%m%d%H%M%SZ
[2024-05-18 11:41:15] + echo LRMSStartTime=20240518113805Z
[2024-05-18 11:41:15] ++ date -d '1970-01-01 UTC 1716025274 seconds' +%Y%m%d%H%M%SZ
[2024-05-18 11:41:15] + echo LRMSEndTime=20240518114114Z
[2024-05-18 11:41:15] + echo walltime=189
[2024-05-18 11:41:15] + echo exitcode=2
[2024-05-18 11:41:15] + exit 2
[2024-05-18 11:41:15] ./log.38734053._004948.job.log.1
[2024-05-18 11:41:15] ./runtime_log
[2024-05-18 11:41:15] ./runtime_log.err
[2024-05-18 11:41:15] ./PanDA_Pilot-6201788873/log.EVNTtoHITS
[2024-05-18 11:41:15] ./PanDA_Pilot-6201788873/PoolFileCatalog.xml.AthenaMP-saved
[2024-05-18 11:41:15] ./PanDA_Pilot-6201788873/prmon.log
[2024-05-18 11:41:15] ./PanDA_Pilot-6201788873/PoolFileCatalog.xml.BAK
[2024-05-18 11:41:15] ./PanDA_Pilot-6201788873/PoolFileCatalog.xml
[2024-05-18 11:41:15] ./PanDA_Pilot-6201788873/pilotlog.txt
[2024-05-18 11:41:15] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-18 11:41:15] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-18 11:41:15] ./pilot3/pilot/util/realtimelogger.py
[2024-05-18 11:41:15] ./pilot3/pilot/util/loggingsupport.py
[2024-05-18 11:41:15] ./pilotlog.txt
15:03:24 (1262965): wrapper (7.7.26015): starting
15:03:24 (1262965): wrapper: running run_atlas (--nthreads 4)
[2024-05-18 15:03:24] Arguments: --nthreads 4
[2024-05-18 15:03:24] Threads: 4
[2024-05-18 15:03:24] This job has been restarted, cleaning up previous attempt
[2024-05-18 15:03:24] Checking for CVMFS
[2024-05-18 15:03:24] No cvmfs_config command found, will try listing directly
[2024-05-18 15:03:24] CVMFS is ok
[2024-05-18 15:03:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 15:03:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 15:03:24] Further information can be found at the LHC@home message board.
[2024-05-18 15:03:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 15:03:24] Checking for apptainer binary...
[2024-05-18 15:03:24] which: no apptainer in ((null))
[2024-05-18 15:03:24] apptainer is not installed, using version from CVMFS
[2024-05-18 15:03:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 15:03:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-18 15:03:25] apptainer works
[2024-05-18 15:03:25] Set ATHENA_PROC_NUMBER=4
[2024-05-18 15:03:25] Set ATHENA_CORE_NUMBER=4
[2024-05-18 15:03:25] Starting ATLAS job with PandaID=6201788873
[2024-05-18 15:03:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 15:06:36] Job failed
[2024-05-18 15:06:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2024-05-18 15:06:36] ++ pwd
[2024-05-18 15:06:36] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot92/slots/1/
[2024-05-18 15:06:36] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot92/slots/1/
[2024-05-18 15:06:36] + mv ATLAS.root_0 EVNT.38734051._000907.pool.root.1
[2024-05-18 15:06:36] mv: 'ATLAS.root_0' and 'EVNT.38734051._000907.pool.root.1' are the same file
[2024-05-18 15:06:36] + tar --strip-components=5 -xvf input.tar.gz
[2024-05-18 15:06:36] + umask 077
[2024-05-18 15:06:36] ++ date +%s
[2024-05-18 15:06:36] + ACCOUNTING_STARTTIME=1716037405
[2024-05-18 15:06:36] + echo 'Detecting resource accounting method available for the job.'
[2024-05-18 15:06:36] Detecting resource accounting method available for the job.
[2024-05-18 15:06:36] + JOB_ACCOUNTING=
[2024-05-18 15:06:36] + command -v arc-job-cgroup
[2024-05-18 15:06:36] + '[' -z '' ']'
[2024-05-18 15:06:36] + GNU_TIME=/usr/bin/time
[2024-05-18 15:06:36] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2024-05-18 15:06:36] Looking for /usr/bin/time tool for accounting measurements
[2024-05-18 15:06:36] + '[' '!' -z /usr/bin/time ']'
[2024-05-18 15:06:36] + /usr/bin/time --version
[2024-05-18 15:06:36] + echo 'GNU time found and will be used for job accounting.'
[2024-05-18 15:06:36] GNU time found and will be used for job accounting.
[2024-05-18 15:06:36] + JOB_ACCOUNTING=gnutime
[2024-05-18 15:06:36] + '[' -z gnutime ']'
[2024-05-18 15:06:36] + export PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-18 15:06:36] + PANDA_JSID=harvester-CERN_central_ACTA
[2024-05-18 15:06:36] + export GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-10/BOINC_MCORE/6201788873.out
[2024-05-18 15:06:36] + GTAG=http://aipanda403.cern.ch/data/jobs/2024-05-10/BOINC_MCORE/6201788873.out
[2024-05-18 15:06:36] + export PILOT_NOKILL=YES
[2024-05-18 15:06:36] + PILOT_NOKILL=YES
[2024-05-18 15:06:36] + export GRID_GLOBAL_JOBID=WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-18 15:06:36] + GRID_GLOBAL_JOBID=WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-18 15:06:36] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-18 15:06:36] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo
[2024-05-18 15:06:36] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-18 15:06:36] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2024-05-18 15:06:36] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-18 15:06:36] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2024-05-18 15:06:36] ++ pwd
[2024-05-18 15:06:36] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot92/slots/1
[2024-05-18 15:06:36] + RUNTIME_JOB_STDIN=/dev/null
[2024-05-18 15:06:36] ++ pwd
[2024-05-18 15:06:36] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot92/slots/1/log.38734053._004948.job.log.1
[2024-05-18 15:06:36] ++ pwd
[2024-05-18 15:06:36] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot92/slots/1/log.38734053._004948.job.log.1
[2024-05-18 15:06:36] ++ pwd
[2024-05-18 15:06:36] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot92/slots/1.diag
[2024-05-18 15:06:36] + '[' '!' -z '' ']'
[2024-05-18 15:06:36] + RUNTIME_LOCAL_SCRATCH_DIR=
[2024-05-18 15:06:36] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2024-05-18 15:06:36] + RUNTIME_FRONTEND_SEES_NODE=
[2024-05-18 15:06:36] + RUNTIME_NODE_SEES_FRONTEND=yes
[2024-05-18 15:06:36] + '[' '!' -z '' ']'
[2024-05-18 15:06:36] + '[' -z yes ']'
[2024-05-18 15:06:36] ++ pwd
[2024-05-18 15:06:36] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag
[2024-05-18 15:06:36] + runtimeenvironments=
[2024-05-18 15:06:36] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-18 15:06:36] + RTE_function_0 1
[2024-05-18 15:06:36] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 15:06:36] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 15:06:36] + export BOINC_APP=ATLAS
[2024-05-18 15:06:36] + BOINC_APP=ATLAS
[2024-05-18 15:06:36] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 15:06:36] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 15:06:36] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 15:06:36] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 15:06:36] + '[' -z 1 ']'
[2024-05-18 15:06:36] + '[' 1 == 1 ']'
[2024-05-18 15:06:36] + shift
[2024-05-18 15:06:36] + FRONTIER_SQUID_NDGF='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)'
[2024-05-18 15:06:36] + FRONTIER_BACKUP='(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 15:06:36] + FRONTIER_WPAD='(proxyconfigurl=http://grid-wpad/wpad.dat)'
[2024-05-18 15:06:36] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot92/slots/1/
[2024-05-18 15:06:36] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot92/slots/1/
[2024-05-18 15:06:36] + '[' -e /scratch/boinc/var/slot92/slots/1/init_data.xml ']'
[2024-05-18 15:06:36] + grep '<use_http_proxy/>' /scratch/boinc/var/slot92/slots/1/init_data.xml
[2024-05-18 15:06:36] + '[' -e /scratch/boinc/var/slot92/slots/1/init_data.xml ']'
[2024-05-18 15:06:36] + grep '.cern.ch</domain_name>' /scratch/boinc/var/slot92/slots/1/init_data.xml
[2024-05-18 15:06:36] + FRONTIER_SERVER_URLS='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)'
[2024-05-18 15:06:36] + FRONTIER_PROXY_URLS='(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 15:06:36] + echo 'export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)"'
[2024-05-18 15:06:36] + export 'FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 15:06:36] + FRONTIER_SERVER='(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega.izum.si:3128)(proxyurl=http://grid-proxy.ijs.si:3128)(proxyurl=http://atlas-db-squid1.grid.uiocloud.no:3128)(backupproxyurl=http://atlasbpfrontier.cern.ch:3127)(backupproxyurl=http://atlasbpfrontier.fnal.gov:3127)'
[2024-05-18 15:06:36] + '[' 0 -ne 0 ']'
[2024-05-18 15:06:36] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2024-05-18 15:06:36] + '[' -f /etc/os-release ']'
[2024-05-18 15:06:36] +++ cat /etc/os-release
[2024-05-18 15:06:36] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2024-05-18 15:06:36] +++ NAME='CentOS Linux'
[2024-05-18 15:06:36] +++ VERSION='7 (Core)'
[2024-05-18 15:06:36] +++ ID=centos
[2024-05-18 15:06:36] +++ ID_LIKE='rhel fedora'
[2024-05-18 15:06:36] +++ VERSION_ID=7
[2024-05-18 15:06:36] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2024-05-18 15:06:36] +++ ANSI_COLOR='0;31'
[2024-05-18 15:06:36] +++ CPE_NAME=cpe:/o:centos:centos:7
[2024-05-18 15:06:36] +++ HOME_URL=https://www.centos.org/
[2024-05-18 15:06:36] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2024-05-18 15:06:36] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2024-05-18 15:06:36] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2024-05-18 15:06:36] +++ REDHAT_SUPPORT_PRODUCT=centos
[2024-05-18 15:06:36] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2024-05-18 15:06:36] ++ echo 'CentOS Linux 7 (Core)'
[2024-05-18 15:06:36] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2024-05-18 15:06:36] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2024-05-18 15:06:36] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2024-05-18 15:06:36] + HOME=/scratch/boinc/var/slot92/slots/1
[2024-05-18 15:06:36] + export HOME
[2024-05-18 15:06:36] + cd /scratch/boinc/var/slot92/slots/1
[2024-05-18 15:06:36] + '[' '!' -z '' ']'
[2024-05-18 15:06:36] + '[' -z '' ']'
[2024-05-18 15:06:36] ++ /bin/hostname -f
[2024-05-18 15:06:36] + nodename=skurut14.grid.cesnet.cz
[2024-05-18 15:06:36] + echo nodename=skurut14.grid.cesnet.cz
[2024-05-18 15:06:36] + echo Processors=1
[2024-05-18 15:06:36] + echo Benchmark=HEPSPEC:1.0
[2024-05-18 15:06:36] + executable=./runpilot2-wrapper.sh
[2024-05-18 15:06:36] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2024-05-18 15:06:36] ++ dd if=./runpilot2-wrapper.sh count=1
[2024-05-18 15:06:36] ++ head -n 1
[2024-05-18 15:06:36] ++ tr -d '\0'
[2024-05-18 15:06:36] + line1='#!/bin/bash'
[2024-05-18 15:06:36] ++ echo '#!/bin/bash'
[2024-05-18 15:06:36] ++ sed -n 's/^#! *//p'
[2024-05-18 15:06:36] + shebang=/bin/bash
[2024-05-18 15:06:36] ++ echo /bin/bash
[2024-05-18 15:06:36] ++ awk '{print $1}'
[2024-05-18 15:06:36] + interpreter=/bin/bash
[2024-05-18 15:06:36] + '[' /bin/bash = /usr/bin/env ']'
[2024-05-18 15:06:36] + '[' x/bin/bash = x ']'
[2024-05-18 15:06:36] + type /bin/bash
[2024-05-18 15:06:36] + '[' xgnutime = xgnutime ']'
[2024-05-18 15:06:36] + /usr/bin/time -o /scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type SCORE_HIMEM --pilotversion 3.7.5.4 -z -t --piloturl local --mute --container
[2024-05-18 15:06:36] + RESULT=2
[2024-05-18 15:06:36] + sed -i -e /nodename=/d /scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag
[2024-05-18 15:06:36] ++ grep domain_name init_data.xml
[2024-05-18 15:06:36] ++ awk -F '>' '{print $2}'
[2024-05-18 15:06:36] ++ awk -F '<' '{print $1}'
[2024-05-18 15:06:36] ++ sed -e 's# #_#g'
[2024-05-18 15:06:36] + hostname=skurut14.grid.cesnet.cz
[2024-05-18 15:06:36] ++ grep user_name init_data.xml
[2024-05-18 15:06:36] ++ awk -F '>' '{print $2}'
[2024-05-18 15:06:36] ++ awk -F '<' '{print $1}'
[2024-05-18 15:06:36] ++ sed -e 's# #_#g'
[2024-05-18 15:06:36] + username=praguelcg2
[2024-05-18 15:06:36] + nodename=praguelcg2@skurut14.grid.cesnet.cz
[2024-05-18 15:06:36] + echo nodename=praguelcg2@skurut14.grid.cesnet.cz
[2024-05-18 15:06:36] + '[' -n 4 ']'
[2024-05-18 15:06:36] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot92/slots/1/WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag
[2024-05-18 15:06:36] + echo exitcode=2
[2024-05-18 15:06:36] + runtimeenvironments=
[2024-05-18 15:06:36] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2024-05-18 15:06:36] + RTE_function_0 2
[2024-05-18 15:06:36] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 15:06:36] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2024-05-18 15:06:36] + export BOINC_APP=ATLAS
[2024-05-18 15:06:36] + BOINC_APP=ATLAS
[2024-05-18 15:06:36] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 15:06:36] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2024-05-18 15:06:36] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 15:06:36] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2024-05-18 15:06:36] + '[' -z 2 ']'
[2024-05-18 15:06:36] + '[' 2 == 1 ']'
[2024-05-18 15:06:36] + '[' 0 -ne 0 ']'
[2024-05-18 15:06:36] + echo 'zip all output files'
[2024-05-18 15:06:36] + flist='*.diag '
[2024-05-18 15:06:36] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-18 15:06:36] + '[' -e ./heartbeat.json ']'
[2024-05-18 15:06:36] + flist='*.diag ./heartbeat.json'
[2024-05-18 15:06:36] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-18 15:06:36] + '[' -e ./output.list ']'
[2024-05-18 15:06:36] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-18 15:06:36] + '[' -e ./log.38734053._004948.job.log.1 ']'
[2024-05-18 15:06:36] + flist='*.diag ./heartbeat.json ./log.38734053._004948.job.log.1'
[2024-05-18 15:06:36] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-18 15:06:36] + '[' -e ./log.38734053._004948.job.log.1 ']'
[2024-05-18 15:06:36] + flist='*.diag ./heartbeat.json ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1'
[2024-05-18 15:06:36] + for f in ./heartbeat.json ./output.list ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1 ./gmlog/
[2024-05-18 15:06:36] + '[' -e ./gmlog/ ']'
[2024-05-18 15:06:36] + '[' -f output.list ']'
[2024-05-18 15:06:36] + tar cvf result.tar.gz WfXLDmojjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmz0IKDmsX8FEo.diag ./heartbeat.json ./log.38734053._004948.job.log.1 ./log.38734053._004948.job.log.1
[2024-05-18 15:06:36] + '[' xgnutime = xcgroup ']'
[2024-05-18 15:06:36] + '[' -n '' ']'
[2024-05-18 15:06:36] + '[' -n '' ']'
[2024-05-18 15:06:36] ++ date +%s
[2024-05-18 15:06:36] + ACCOUNTING_ENDTIME=1716037595
[2024-05-18 15:06:36] ++ date -d '1970-01-01 UTC 1716037405 seconds' +%Y%m%d%H%M%SZ
[2024-05-18 15:06:36] + echo LRMSStartTime=20240518150325Z
[2024-05-18 15:06:36] ++ date -d '1970-01-01 UTC 1716037595 seconds' +%Y%m%d%H%M%SZ
[2024-05-18 15:06:36] + echo LRMSEndTime=20240518150635Z
[2024-05-18 15:06:36] + echo walltime=190
[2024-05-18 15:06:36] + echo exitcode=2
[2024-05-18 15:06:36] + exit 2
[2024-05-18 15:06:36] ./log.38734053._004948.job.log.1
[2024-05-18 15:06:36] ./runtime_log
[2024-05-18 15:06:36] ./runtime_log.err
[2024-05-18 15:06:36] ./PanDA_Pilot-6201788873/log.EVNTtoHITS
[2024-05-18 15:06:36] ./PanDA_Pilot-6201788873/PoolFileCatalog.xml.AthenaMP-saved
[2024-05-18 15:06:36] ./PanDA_Pilot-6201788873/prmon.log
[2024-05-18 15:06:36] ./PanDA_Pilot-6201788873/PoolFileCatalog.xml.BAK
[2024-05-18 15:06:36] ./PanDA_Pilot-6201788873/PoolFileCatalog.xml
[2024-05-18 15:06:36] ./PanDA_Pilot-6201788873/pilotlog.txt
[2024-05-18 15:06:36] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
[2024-05-18 15:06:36] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2024-05-18 15:06:36] ./pilot3/pilot/util/realtimelogger.py
[2024-05-18 15:06:36] ./pilot3/pilot/util/loggingsupport.py
[2024-05-18 15:06:36] ./pilotlog.txt
15:16:36 (1262965): run_atlas exited; CPU time 14.558480
15:16:36 (1262965): app exit status: 0x1
15:16:36 (1262965): called boinc_finish(195)
</stderr_txt>
]]>
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