Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
03:23:01 (55435): wrapper (7.7.26015): starting
03:23:01 (55435): wrapper: running run_atlas (--nthreads 12)
[2024-05-17 03:23:01] Arguments: --nthreads 12
[2024-05-17 03:23:01] Threads: 12
[2024-05-17 03:23:01] Checking for CVMFS
[2024-05-17 03:23:01] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-17 03:23:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-17 03:23:01] Running cvmfs_config stat atlas.cern.ch
[2024-05-17 03:23:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-17 03:23:02] 2.10.1.0 3019 79512 138052 132837 2 95 41721022 45568000 11996 130560 0 366621537 99.745 260623670 20217 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-17 03:23:02] CVMFS is ok
[2024-05-17 03:23:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 03:23:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 03:23:02] Further information can be found at the LHC@home message board.
[2024-05-17 03:23:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 03:23:02] Checking for apptainer binary...
[2024-05-17 03:23:02] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-17 03:23:02] Running /usr/bin/apptainer --version
[2024-05-17 03:23:02] apptainer version 1.1.8-1.el7
[2024-05-17 03:23:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 03:23:03] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0129.triumf.lcg
[2024-05-17 03:23:03] apptainer works
[2024-05-17 03:23:03] Set ATHENA_PROC_NUMBER=12
[2024-05-17 03:23:03] Set ATHENA_CORE_NUMBER=12
[2024-05-17 03:23:03] Starting ATLAS job with PandaID=6201786452
[2024-05-17 03:23:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 09:49:52]  *** The last 200 lines of the pilot log: ***
[2024-05-17 09:49:52] 2024-05-17 16:49:27,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 09:49:52] 2024-05-17 16:49:29,539 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-17 09:49:52] 2024-05-17 16:49:29,603 | INFO     | job 6201786452 has state=finished
[2024-05-17 09:49:52] 2024-05-17 16:49:29,603 | INFO     | preparing for final server update for job 6201786452 in state='finished'
[2024-05-17 09:49:52] 2024-05-17 16:49:29,604 | INFO     | this job has now completed (state=finished)
[2024-05-17 09:49:52] 2024-05-17 16:49:29,604 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 09:49:52] 2024-05-17 16:49:29,604 | INFO     | job 6201786452 has finished - writing final server update
[2024-05-17 09:49:52] 2024-05-17 16:49:29,604 | INFO     | total number of processed events: 1950 (read)
[2024-05-17 09:49:52] 2024-05-17 16:49:29,608 | INFO     | executing command: lscpu
[2024-05-17 09:49:52] 2024-05-17 16:49:29,673 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 09:49:52] 2024-05-17 16:49:29,673 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 09:49:52] 2024-05-17 16:49:29,725 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 09:49:52] 2024-05-17 16:49:30,261 | INFO     | monitor loop #1776: job 0:6201786452 is in state 'finished'
[2024-05-17 09:49:52] 2024-05-17 16:49:30,261 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 09:49:52] 2024-05-17 16:49:32,763 | INFO     | monitor loop #1777: job 0:6201786452 is in state 'finished'
[2024-05-17 09:49:52] 2024-05-17 16:49:32,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 09:49:52] 2024-05-17 16:49:33,753 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 09:49:52] 2024-05-17 16:49:33,753 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6201786452/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 09:49:52] 2024-05-17 16:49:33,754 | INFO     | extracted standard info from prmon json
[2024-05-17 09:49:52] 2024-05-17 16:49:33,754 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 09:49:52] 2024-05-17 16:49:33,754 | WARNING  | GPU info not found in prmon json
[2024-05-17 09:49:52] 2024-05-17 16:49:33,759 | INFO     | fitting pss+swap vs Time
[2024-05-17 09:49:52] 2024-05-17 16:49:33,759 | INFO     | model: linear, x: [1715941423.0, 1715941484.0, 1715941545.0, 1715941606.0, 1715941667.0, 1715941728.0, 1715941789.0, 1715941850.0, 1715941911.0, 1715941972.0, 1715
[2024-05-17 09:49:52] 2024-05-17 16:49:33,760 | INFO     | sum of square deviations: 17014774835.0
[2024-05-17 09:49:52] 2024-05-17 16:49:33,762 | INFO     | sum of deviations: 945756499662.5004
[2024-05-17 09:49:52] 2024-05-17 16:49:33,762 | INFO     | mean x: 1715952982.5
[2024-05-17 09:49:52] 2024-05-17 16:49:33,762 | INFO     | mean y: 3754411.5078947367
[2024-05-17 09:49:52] 2024-05-17 16:49:33,763 | INFO     | -- intersect: -95376507863.62482
[2024-05-17 09:49:52] 2024-05-17 16:49:33,763 | INFO     | intersect: -95376507863.62482
[2024-05-17 09:49:52] 2024-05-17 16:49:33,763 | INFO     | chi2: 25.366154039402787
[2024-05-17 09:49:52] 2024-05-17 16:49:33,763 | INFO     | model: linear, x: [1715941423.0, 1715941484.0, 1715941545.0, 1715941606.0, 1715941667.0, 1715941728.0, 1715941789.0, 1715941850.0, 1715941911.0, 1715941972.0, 1715
[2024-05-17 09:49:52] 2024-05-17 16:49:33,763 | INFO     | sum of square deviations: 16351934500.0
[2024-05-17 09:49:52] 2024-05-17 16:49:33,766 | INFO     | sum of deviations: 1123867411302.9998
[2024-05-17 09:49:52] 2024-05-17 16:49:33,766 | INFO     | mean x: 1715952830.0
[2024-05-17 09:49:52] 2024-05-17 16:49:33,766 | INFO     | mean y: 3795378.2346666665
[2024-05-17 09:49:52] 2024-05-17 16:49:33,766 | INFO     | -- intersect: -117933532769.09595
[2024-05-17 09:49:52] 2024-05-17 16:49:33,766 | INFO     | intersect: -117933532769.09595
[2024-05-17 09:49:52] 2024-05-17 16:49:33,767 | INFO     | chi2: 21.598915684346846
[2024-05-17 09:49:52] 2024-05-17 16:49:33,767 | INFO     | current chi2=21.598915684346846 (change=14.851436876098997 %)
[2024-05-17 09:49:52] 2024-05-17 16:49:33,767 | INFO     | right removable region: 374
[2024-05-17 09:49:52] 2024-05-17 16:49:33,768 | INFO     | model: linear, x: [1715941728.0, 1715941789.0, 1715941850.0, 1715941911.0, 1715941972.0, 1715942033.0, 1715942094.0, 1715942155.0, 1715942216.0, 1715942277.0, 1715
[2024-05-17 09:49:52] 2024-05-17 16:49:33,768 | INFO     | sum of square deviations: 16351934500.0
[2024-05-17 09:49:52] 2024-05-17 16:49:33,770 | INFO     | sum of deviations: 762878431434.0002
[2024-05-17 09:49:52] 2024-05-17 16:49:33,771 | INFO     | mean x: 1715953135.0
[2024-05-17 09:49:52] 2024-05-17 16:49:33,771 | INFO     | mean y: 3796464.64
[2024-05-17 09:49:52] 2024-05-17 16:49:33,771 | INFO     | -- intersect: -80051785707.79686
[2024-05-17 09:49:52] 2024-05-17 16:49:33,771 | INFO     | intersect: -80051785707.79686
[2024-05-17 09:49:52] 2024-05-17 16:49:33,771 | INFO     | chi2: 21.410119409125734
[2024-05-17 09:49:52] 2024-05-17 16:49:33,771 | INFO     | current chi2=21.410119409125734 (change=15.595721070414948 %)
[2024-05-17 09:49:52] 2024-05-17 16:49:33,771 | INFO     | left removable region: 10
[2024-05-17 09:49:52] 2024-05-17 16:49:33,772 | INFO     | model: linear, x: [1715942033.0, 1715942094.0, 1715942155.0, 1715942216.0, 1715942277.0, 1715942338.0, 1715942399.0, 1715942460.0, 1715942521.0, 1715942582.0, 1715
[2024-05-17 09:49:52] 2024-05-17 16:49:33,772 | INFO     | sum of square deviations: 14954754815.0
[2024-05-17 09:49:52] 2024-05-17 16:49:33,774 | INFO     | sum of deviations: 811951565674.4999
[2024-05-17 09:49:52] 2024-05-17 16:49:33,774 | INFO     | mean x: 1715953104.5
[2024-05-17 09:49:52] 2024-05-17 16:49:33,774 | INFO     | mean y: 3886979.793956044
[2024-05-17 09:49:52] 2024-05-17 16:49:33,774 | INFO     | -- intersect: -93161853753.40132
[2024-05-17 09:49:52] 2024-05-17 16:49:33,774 | INFO     | intersect: -93161853753.40132
[2024-05-17 09:49:52] 2024-05-17 16:49:33,775 | INFO     | chi2: 13.879474628536983
[2024-05-17 09:49:52] 2024-05-17 16:49:33,775 | INFO     | -- intersect: -93161853753.40132
[2024-05-17 09:49:52] 2024-05-17 16:49:33,775 | INFO     | current memory leak: 54.29 B/s (using 364 data points, chi2=13.88)
[2024-05-17 09:49:52] 2024-05-17 16:49:33,776 | INFO     | ..............................
[2024-05-17 09:49:52] 2024-05-17 16:49:33,776 | INFO     | . Timing measurements:
[2024-05-17 09:49:52] 2024-05-17 16:49:33,776 | INFO     | . get job = 0 s
[2024-05-17 09:49:52] 2024-05-17 16:49:33,776 | INFO     | . initial setup = 2 s
[2024-05-17 09:49:52] 2024-05-17 16:49:33,776 | INFO     | . payload setup = 9 s
[2024-05-17 09:49:52] 2024-05-17 16:49:33,776 | INFO     | . stage-in = 0 s
[2024-05-17 09:49:52] 2024-05-17 16:49:33,776 | INFO     | . payload execution = 23139 s
[2024-05-17 09:49:52] 2024-05-17 16:49:33,776 | INFO     | . stage-out = 3 s
[2024-05-17 09:49:52] 2024-05-17 16:49:33,776 | INFO     | . log creation = 0 s
[2024-05-17 09:49:52] 2024-05-17 16:49:33,776 | INFO     | ..............................
[2024-05-17 09:49:52] 2024-05-17 16:49:34,140 | INFO     | 
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | job summary report
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | --------------------------------------------------
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | PanDA job id: 6201786452
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | task id: 38734053
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | errors: (none)
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | pilot state: finished 
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | transexitcode: 0
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | exeerrorcode: 0
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | exeerrordiag: 
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | exitcode: 0
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | exitmsg: OK
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | cpuconsumptiontime: 247277 s
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | nevents: 1950
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | neventsw: 0
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | pid: 68827
[2024-05-17 09:49:52] 2024-05-17 16:49:34,141 | INFO     | pgrp: 68827
[2024-05-17 09:49:52] 2024-05-17 16:49:34,142 | INFO     | corecount: 12
[2024-05-17 09:49:52] 2024-05-17 16:49:34,142 | INFO     | event service: False
[2024-05-17 09:49:52] 2024-05-17 16:49:34,142 | INFO     | sizes: {0: 2394896, 5: 2395134, 11: 2395190, 23152: 2450275, 23153: 2450274, 23158: 2458172, 23161: 2458356, 23165: 2458578}
[2024-05-17 09:49:52] 2024-05-17 16:49:34,142 | INFO     | --------------------------------------------------
[2024-05-17 09:49:52] 2024-05-17 16:49:34,142 | INFO     | 
[2024-05-17 09:49:52] 2024-05-17 16:49:34,142 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 09:49:52] 2024-05-17 16:49:34,170 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,171 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,172 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,172 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,172 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,172 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 09:49:52] 2024-05-17 16:49:34,172 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,172 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 09:49:52] 2024-05-17 16:49:34,172 | INFO     | job 6201786452 has completed (purged errors)
[2024-05-17 09:49:52] 2024-05-17 16:49:34,172 | INFO     | overall cleanup function is called
[2024-05-17 09:49:52] 2024-05-17 16:49:35,188 | INFO     | --- collectZombieJob: --- 10, [68827]
[2024-05-17 09:49:52] 2024-05-17 16:49:35,188 | INFO     | zombie collector waiting for pid 68827
[2024-05-17 09:49:52] 2024-05-17 16:49:35,188 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 09:49:52] 2024-05-17 16:49:36,193 | INFO     | collected zombie processes
[2024-05-17 09:49:52] 2024-05-17 16:49:36,194 | INFO     | will now attempt to kill all subprocesses of pid=68827
[2024-05-17 09:49:52] 2024-05-17 16:49:36,374 | INFO     | process IDs to be killed: [68827] (in reverse order)
[2024-05-17 09:49:52] 2024-05-17 16:49:36,490 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 09:49:52] 2024-05-17 16:49:36,491 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 09:49:52] 2024-05-17 16:49:36,502 | INFO     | did not find any defunct processes belonging to 68827
[2024-05-17 09:49:52] 2024-05-17 16:49:36,512 | INFO     | did not find any defunct processes belonging to 68827
[2024-05-17 09:49:52] 2024-05-17 16:49:36,513 | INFO     | ready for new job
[2024-05-17 09:49:52] 2024-05-17 16:49:36,513 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 09:49:52] 2024-05-17 16:49:36,516 | INFO     | *************************************
[2024-05-17 09:49:52] 2024-05-17 16:49:36,516 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 09:49:52] 2024-05-17 16:49:36,516 | INFO     | *************************************
[2024-05-17 09:49:52] 2024-05-17 16:49:36,516 | INFO     | 
[2024-05-17 09:49:52] 2024-05-17 16:49:36,520 | INFO     | architecture information:
[2024-05-17 09:49:52] 2024-05-17 16:49:36,521 | INFO     | executing command: cat /etc/os-release
[2024-05-17 09:49:52] 2024-05-17 16:49:36,541 | INFO     | cat /etc/os-release:
[2024-05-17 09:49:52] NAME="CentOS Linux"
[2024-05-17 09:49:52] VERSION="7 (Core)"
[2024-05-17 09:49:52] ID="centos"
[2024-05-17 09:49:52] ID_LIKE="rhel fedora"
[2024-05-17 09:49:52] VERSION_ID="7"
[2024-05-17 09:49:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 09:49:52] ANSI_COLOR="0;31"
[2024-05-17 09:49:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 09:49:52] HOME_URL="https://www.centos.org/"
[2024-05-17 09:49:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 09:49:52] 
[2024-05-17 09:49:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 09:49:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 09:49:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 09:49:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 09:49:52] 
[2024-05-17 09:49:52] 2024-05-17 16:49:36,542 | INFO     | *************************************
[2024-05-17 09:49:52] 2024-05-17 16:49:37,045 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 09:49:52] 2024-05-17 16:49:37,067 | INFO     | sufficient remaining disk space (2044122365952 B)
[2024-05-17 09:49:52] 2024-05-17 16:49:37,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 09:49:52] 2024-05-17 16:49:37,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 09:49:52] 2024-05-17 16:49:37,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 09:49:52] 2024-05-17 16:49:37,068 | INFO     | aborting loop
[2024-05-17 09:49:52] 2024-05-17 16:49:37,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 09:49:52] 2024-05-17 16:49:37,714 | INFO     | all payload control threads have been joined
[2024-05-17 09:49:52] 2024-05-17 16:49:37,928 | INFO     | all data control threads have been joined
[2024-05-17 09:49:52] 2024-05-17 16:49:38,044 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 09:49:52] 2024-05-17 16:49:38,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 09:49:52] 2024-05-17 16:49:38,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 09:49:52] 2024-05-17 16:49:38,070 | INFO     | [job] retrieve thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:38,074 | INFO     | [job] job monitor thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:38,300 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:38,304 | INFO     | [job] validate thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:38,330 | INFO     | all job control threads have been joined
[2024-05-17 09:49:52] 2024-05-17 16:49:38,380 | INFO     | [data] copytool_in thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:38,476 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:38,609 | INFO     | [payload] validate_post thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:38,720 | INFO     | [payload] control thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:38,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 09:49:52] 2024-05-17 16:49:38,883 | INFO     | [payload] failed_post thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:38,904 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:38,933 | INFO     | [data] control thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:39,031 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:39,336 | INFO     | [job] control thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:39,446 | INFO     | [data] copytool_out thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:39,860 | INFO     | [job] queue monitor thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:40,107 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 09:49:52] 2024-05-17 16:49:44,109 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 09:49:52] 2024-05-17 16:49:45,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496227268416)>', '<ExcThread(monitor, started 140495678330624)>']
[2024-05-17 09:49:52] 2024-05-17 16:49:46,088 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 09:49:52] 2024-05-17 16:49:46,088 | INFO     | [monitor] control thread has ended
[2024-05-17 09:49:52] 2024-05-17 16:49:50,976 | INFO     | all workflow threads have been joined
[2024-05-17 09:49:52] 2024-05-17 16:49:50,977 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 09:49:52] 2024-05-17 16:49:50,977 | INFO     | traces error code: 0
[2024-05-17 09:49:52] 2024-05-17 16:49:50,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 09:49:52] 2024-05-17 16:49:51,095 [wrapper] ==== pilot stdout END ====
[2024-05-17 09:49:52] 2024-05-17 16:49:51,100 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 09:49:52] 2024-05-17 16:49:51,104 [wrapper] pilotpid: 59850
[2024-05-17 09:49:52] 2024-05-17 16:49:51,107 [wrapper] Pilot exit status: 0
[2024-05-17 09:49:52] 2024-05-17 16:49:51,118 [wrapper] pandaids: 6201786452
[2024-05-17 09:49:52] 2024-05-17 16:49:51,196 [wrapper] cleanup: SIGTERM to supervisor_pilot 226685 59851
[2024-05-17 09:49:52] 2024-05-17 16:49:51,199 [wrapper] Test setup, not cleaning
[2024-05-17 09:49:52] 2024-05-17 16:49:51,202 [wrapper] ==== wrapper stdout END ====
[2024-05-17 09:49:52] 2024-05-17 16:49:51,207 [wrapper] ==== wrapper stderr END ====
[2024-05-17 09:49:52] 2024-05-17 16:49:51,215 [wrapper] apfmon messages muted
[2024-05-17 09:49:52]  *** Error codes and diagnostics ***
[2024-05-17 09:49:52]     "exeErrorCode": 0,
[2024-05-17 09:49:52]     "exeErrorDiag": "",
[2024-05-17 09:49:52]     "pilotErrorCode": 0,
[2024-05-17 09:49:52]     "pilotErrorDiag": "",
[2024-05-17 09:49:52]  *** Listing of results directory ***
[2024-05-17 09:49:52] total 1818192
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc     467845 May 10 10:53 pilot3.tar.gz
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc       5633 May 10 10:54 queuedata.json
[2024-05-17 09:49:52] -rwx------ 1 boinc boinc      32251 May 10 10:56 runpilot2-wrapper.sh
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc        100 May 17 03:22 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 09:49:52] -rwxr-xr-x 1 boinc boinc       7986 May 17 03:22 run_atlas
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc        105 May 17 03:22 job.xml
[2024-05-17 09:49:52] -rw-r--r-- 2 boinc boinc  331332987 May 17 03:23 EVNT.38734051._000895.pool.root.1
[2024-05-17 09:49:52] -rw-r--r-- 2 boinc boinc  327942526 May 17 03:23 EVNT.38734051._000896.pool.root.1
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc       6621 May 17 03:23 init_data.xml
[2024-05-17 09:49:52] drwxrwx--x 2 boinc boinc       4096 May 17 03:23 shared
[2024-05-17 09:49:52] -rw-r--r-- 2 boinc boinc     480247 May 17 03:23 input.tar.gz
[2024-05-17 09:49:52] -rw-r--r-- 2 boinc boinc      17587 May 17 03:23 start_atlas.sh
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc          0 May 17 03:23 boinc_lockfile
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc       3369 May 17 03:23 pandaJob.out
[2024-05-17 09:49:52] -rw------- 1 boinc boinc        424 May 17 03:23 setup.sh.local
[2024-05-17 09:49:52] -rw------- 1 boinc boinc    1019392 May 17 03:23 agis_schedconf.cvmfs.json
[2024-05-17 09:49:52] -rw------- 1 boinc boinc    1324701 May 17 03:23 cric_ddmendpoints.json
[2024-05-17 09:49:52] drwx------ 4 boinc boinc       4096 May 17 03:23 pilot3
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc        533 May 17 09:37 boinc_task_state.xml
[2024-05-17 09:49:52] -rw------- 1 boinc boinc 1189402724 May 17 09:48 HITS.38734053._004888.pool.root.1
[2024-05-17 09:49:52] -rw------- 1 boinc boinc         95 May 17 09:49 pilot_heartbeat.json
[2024-05-17 09:49:52] -rw------- 1 boinc boinc       1078 May 17 09:49 memory_monitor_summary.json
[2024-05-17 09:49:52] -rw------- 1 boinc boinc          0 May 17 09:49 agis_ddmendpoints.agis.ALL.json
[2024-05-17 09:49:52] -rw------- 1 boinc boinc    2435386 May 17 09:49 log.38734053._004888.job.log.tgz.1
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc       8192 May 17 09:49 boinc_mmap_file
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc         29 May 17 09:49 wrapper_checkpoint.txt
[2024-05-17 09:49:52] -rw------- 1 boinc boinc      27916 May 17 09:49 heartbeat.json
[2024-05-17 09:49:52] -rw------- 1 boinc boinc       4210 May 17 09:49 pilotlog.txt
[2024-05-17 09:49:52] -rw------- 1 boinc boinc    2347868 May 17 09:49 log.38734053._004888.job.log.1
[2024-05-17 09:49:52] -rw------- 1 boinc boinc        353 May 17 09:49 output.list
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc        620 May 17 09:49 runtime_log
[2024-05-17 09:49:52] -rw------- 1 boinc boinc    4823040 May 17 09:49 result.tar.gz
[2024-05-17 09:49:52] -rw------- 1 boinc boinc        661 May 17 09:49 WyyMDmcejP5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmx0FKDmWezeVn.diag
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc      11339 May 17 09:49 runtime_log.err
[2024-05-17 09:49:52] -rw-r--r-- 1 boinc boinc      22157 May 17 09:49 stderr.txt
[2024-05-17 09:49:52] HITS file was successfully produced:
[2024-05-17 09:49:52] -rw------- 1 boinc boinc 1189402724 May 17 09:48 shared/HITS.pool.root.1
[2024-05-17 09:49:52]  *** Contents of shared directory: ***
[2024-05-17 09:49:52] total 1810572
[2024-05-17 09:49:52] -rw-r--r-- 2 boinc boinc  331332987 May 17 03:23 ATLAS.root_0
[2024-05-17 09:49:52] -rw-r--r-- 2 boinc boinc  327942526 May 17 03:23 ATLAS.root_1
[2024-05-17 09:49:52] -rw-r--r-- 2 boinc boinc     480247 May 17 03:23 input.tar.gz
[2024-05-17 09:49:52] -rw-r--r-- 2 boinc boinc      17587 May 17 03:23 start_atlas.sh
[2024-05-17 09:49:52] -rw------- 1 boinc boinc 1189402724 May 17 09:48 HITS.pool.root.1
[2024-05-17 09:49:52] -rw------- 1 boinc boinc    4823040 May 17 09:49 result.tar.gz
09:49:53 (55435): run_atlas exited; CPU time 245425.180661
09:49:53 (55435): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN