Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
13:23:30 (2241): wrapper (7.7.26015): starting
13:23:30 (2241): wrapper: running run_atlas (--nthreads 12)
[2024-05-16 13:23:30] Arguments: --nthreads 12
[2024-05-16 13:23:30] Threads: 12
[2024-05-16 13:23:30] Checking for CVMFS
[2024-05-16 13:23:31] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-16 13:23:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-16 13:23:31] Running cvmfs_config stat atlas.cern.ch
[2024-05-16 13:23:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-16 13:23:31] 2.10.1.0 61637 182509 156104 132813 2 245 29975211 45568001 20082 130560 0 1055146049 99.772 618118016 16518 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-16 13:23:31] CVMFS is ok
[2024-05-16 13:23:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 13:23:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 13:23:31] Further information can be found at the LHC@home message board.
[2024-05-16 13:23:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 13:23:31] Checking for apptainer binary...
[2024-05-16 13:23:31] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-16 13:23:31] Running /usr/bin/apptainer --version
[2024-05-16 13:23:32] apptainer version 1.1.8-1.el7
[2024-05-16 13:23:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 13:23:33] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0098.triumf.lcg
[2024-05-16 13:23:33] apptainer works
[2024-05-16 13:23:33] Set ATHENA_PROC_NUMBER=12
[2024-05-16 13:23:33] Set ATHENA_CORE_NUMBER=12
[2024-05-16 13:23:33] Starting ATLAS job with PandaID=6201770389
[2024-05-16 13:23:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 03:48:17]  *** The last 200 lines of the pilot log: ***
[2024-05-17 03:48:17] 2024-05-17 10:47:56,734 | INFO     | monitor loop #2755: job 0:6201770389 is in state 'finished'
[2024-05-17 03:48:17] 2024-05-17 10:47:56,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 03:48:17] 2024-05-17 10:47:57,054 | INFO     | job 6201770389 has state=finished
[2024-05-17 03:48:17] 2024-05-17 10:47:57,054 | INFO     | preparing for final server update for job 6201770389 in state='finished'
[2024-05-17 03:48:17] 2024-05-17 10:47:57,055 | INFO     | this job has now completed (state=finished)
[2024-05-17 03:48:17] 2024-05-17 10:47:57,055 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-17 03:48:17] 2024-05-17 10:47:57,055 | INFO     | job 6201770389 has finished - writing final server update
[2024-05-17 03:48:17] 2024-05-17 10:47:57,056 | INFO     | total number of processed events: 1850 (read)
[2024-05-17 03:48:17] 2024-05-17 10:47:57,063 | INFO     | executing command: lscpu
[2024-05-17 03:48:17] 2024-05-17 10:47:57,116 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-17 03:48:17] 2024-05-17 10:47:57,117 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-17 03:48:17] 2024-05-17 10:47:57,176 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-17 03:48:17] 2024-05-17 10:47:59,238 | INFO     | monitor loop #2756: job 0:6201770389 is in state 'finished'
[2024-05-17 03:48:17] 2024-05-17 10:47:59,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 03:48:17] 2024-05-17 10:48:01,741 | INFO     | monitor loop #2757: job 0:6201770389 is in state 'finished'
[2024-05-17 03:48:17] 2024-05-17 10:48:01,742 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-17 03:48:17] 2024-05-17 10:48:02,323 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-17 03:48:17] 2024-05-17 10:48:02,323 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6201770389/memory_monitor_summary.json (trf name=prmon)
[2024-05-17 03:48:17] 2024-05-17 10:48:02,324 | INFO     | extracted standard info from prmon json
[2024-05-17 03:48:17] 2024-05-17 10:48:02,324 | INFO     | extracted standard memory fields from prmon json
[2024-05-17 03:48:17] 2024-05-17 10:48:02,324 | WARNING  | GPU info not found in prmon json
[2024-05-17 03:48:17] 2024-05-17 10:48:02,334 | INFO     | fitting pss+swap vs Time
[2024-05-17 03:48:17] 2024-05-17 10:48:02,335 | INFO     | model: linear, x: [1715891087.0, 1715891148.0, 1715891209.0, 1715891270.0, 1715891331.0, 1715891392.0, 1715891453.0, 1715891514.0, 1715891575.0, 1715891636.0, 1715
[2024-05-17 03:48:17] 2024-05-17 10:48:02,335 | INFO     | sum of square deviations: 189548498926.10623
[2024-05-17 03:48:17] 2024-05-17 10:48:02,348 | INFO     | sum of deviations: 5675341864052.727
[2024-05-17 03:48:17] 2024-05-17 10:48:02,348 | INFO     | mean x: 1715916971.2302244
[2024-05-17 03:48:17] 2024-05-17 10:48:02,348 | INFO     | mean y: 3974732.924439197
[2024-05-17 03:48:17] 2024-05-17 10:48:02,348 | INFO     | -- intersect: -51372931321.38245
[2024-05-17 03:48:17] 2024-05-17 10:48:02,349 | INFO     | intersect: -51372931321.38245
[2024-05-17 03:48:17] 2024-05-17 10:48:02,349 | INFO     | chi2: 25.08439451860205
[2024-05-17 03:48:17] 2024-05-17 10:48:02,350 | INFO     | model: linear, x: [1715891087.0, 1715891148.0, 1715891209.0, 1715891270.0, 1715891331.0, 1715891392.0, 1715891453.0, 1715891514.0, 1715891575.0, 1715891636.0, 1715
[2024-05-17 03:48:17] 2024-05-17 10:48:02,350 | INFO     | sum of square deviations: 186221287998.5
[2024-05-17 03:48:17] 2024-05-17 10:48:02,362 | INFO     | sum of deviations: 6087870542844.001
[2024-05-17 03:48:17] 2024-05-17 10:48:02,362 | INFO     | mean x: 1715916818.5
[2024-05-17 03:48:17] 2024-05-17 10:48:02,362 | INFO     | mean y: 3993670.4394299285
[2024-05-17 03:48:17] 2024-05-17 10:48:02,362 | INFO     | -- intersect: -56092060468.123344
[2024-05-17 03:48:17] 2024-05-17 10:48:02,362 | INFO     | intersect: -56092060468.123344
[2024-05-17 03:48:17] 2024-05-17 10:48:02,363 | INFO     | chi2: 21.542141187833334
[2024-05-17 03:48:17] 2024-05-17 10:48:02,363 | INFO     | current chi2=21.542141187833334 (change=14.121342766084535 %)
[2024-05-17 03:48:17] 2024-05-17 10:48:02,363 | INFO     | right removable region: 841
[2024-05-17 03:48:17] 2024-05-17 10:48:02,364 | INFO     | model: linear, x: [1715891392.0, 1715891453.0, 1715891514.0, 1715891575.0, 1715891636.0, 1715891697.0, 1715891758.0, 1715891819.0, 1715891880.0, 1715891941.0, 1715
[2024-05-17 03:48:17] 2024-05-17 10:48:02,364 | INFO     | sum of square deviations: 186210293350.94632
[2024-05-17 03:48:17] 2024-05-17 10:48:02,376 | INFO     | sum of deviations: 5228343308044.727
[2024-05-17 03:48:17] 2024-05-17 10:48:02,376 | INFO     | mean x: 1715917124.212589
[2024-05-17 03:48:17] 2024-05-17 10:48:02,376 | INFO     | mean y: 3995213.1579572447
[2024-05-17 03:48:17] 2024-05-17 10:48:02,376 | INFO     | -- intersect: -48174887125.145645
[2024-05-17 03:48:17] 2024-05-17 10:48:02,376 | INFO     | intersect: -48174887125.145645
[2024-05-17 03:48:17] 2024-05-17 10:48:02,376 | INFO     | chi2: 21.268409390112097
[2024-05-17 03:48:17] 2024-05-17 10:48:02,377 | INFO     | current chi2=21.268409390112097 (change=15.212586158538127 %)
[2024-05-17 03:48:17] 2024-05-17 10:48:02,377 | INFO     | left removable region: 10
[2024-05-17 03:48:17] 2024-05-17 10:48:02,377 | INFO     | model: linear, x: [1715891697.0, 1715891758.0, 1715891819.0, 1715891880.0, 1715891941.0, 1715892002.0, 1715892063.0, 1715892124.0, 1715892185.0, 1715892246.0, 1715
[2024-05-17 03:48:17] 2024-05-17 10:48:02,377 | INFO     | sum of square deviations: 179017402063.66794
[2024-05-17 03:48:17] 2024-05-17 10:48:02,389 | INFO     | sum of deviations: 5327430207032.598
[2024-05-17 03:48:17] 2024-05-17 10:48:02,389 | INFO     | mean x: 1715917093.9277978
[2024-05-17 03:48:17] 2024-05-17 10:48:02,389 | INFO     | mean y: 4037228.9265944646
[2024-05-17 03:48:17] 2024-05-17 10:48:02,389 | INFO     | -- intersect: -51060431663.89854
[2024-05-17 03:48:17] 2024-05-17 10:48:02,389 | INFO     | intersect: -51060431663.89854
[2024-05-17 03:48:17] 2024-05-17 10:48:02,390 | INFO     | chi2: 14.082712456848832
[2024-05-17 03:48:17] 2024-05-17 10:48:02,390 | INFO     | -- intersect: -51060431663.89854
[2024-05-17 03:48:17] 2024-05-17 10:48:02,390 | INFO     | current memory leak: 29.76 B/s (using 831 data points, chi2=14.08)
[2024-05-17 03:48:17] 2024-05-17 10:48:02,391 | INFO     | ..............................
[2024-05-17 03:48:17] 2024-05-17 10:48:02,391 | INFO     | . Timing measurements:
[2024-05-17 03:48:17] 2024-05-17 10:48:02,391 | INFO     | . get job = 0 s
[2024-05-17 03:48:17] 2024-05-17 10:48:02,391 | INFO     | . initial setup = 2 s
[2024-05-17 03:48:17] 2024-05-17 10:48:02,391 | INFO     | . payload setup = 18 s
[2024-05-17 03:48:17] 2024-05-17 10:48:02,391 | INFO     | . stage-in = 0 s
[2024-05-17 03:48:17] 2024-05-17 10:48:02,391 | INFO     | . payload execution = 51794 s
[2024-05-17 03:48:17] 2024-05-17 10:48:02,391 | INFO     | . stage-out = 3 s
[2024-05-17 03:48:17] 2024-05-17 10:48:02,391 | INFO     | . log creation = 0 s
[2024-05-17 03:48:17] 2024-05-17 10:48:02,391 | INFO     | ..............................
[2024-05-17 03:48:17] 2024-05-17 10:48:02,458 | INFO     | 
[2024-05-17 03:48:17] 2024-05-17 10:48:02,459 | INFO     | job summary report
[2024-05-17 03:48:17] 2024-05-17 10:48:02,459 | INFO     | --------------------------------------------------
[2024-05-17 03:48:17] 2024-05-17 10:48:02,459 | INFO     | PanDA job id: 6201770389
[2024-05-17 03:48:17] 2024-05-17 10:48:02,460 | INFO     | task id: 38734053
[2024-05-17 03:48:17] 2024-05-17 10:48:02,460 | INFO     | errors: (none)
[2024-05-17 03:48:17] 2024-05-17 10:48:02,460 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 03:48:17] 2024-05-17 10:48:02,460 | INFO     | pilot state: finished 
[2024-05-17 03:48:17] 2024-05-17 10:48:02,460 | INFO     | transexitcode: 0
[2024-05-17 03:48:17] 2024-05-17 10:48:02,460 | INFO     | exeerrorcode: 0
[2024-05-17 03:48:17] 2024-05-17 10:48:02,460 | INFO     | exeerrordiag: 
[2024-05-17 03:48:17] 2024-05-17 10:48:02,460 | INFO     | exitcode: 0
[2024-05-17 03:48:17] 2024-05-17 10:48:02,460 | INFO     | exitmsg: OK
[2024-05-17 03:48:17] 2024-05-17 10:48:02,461 | INFO     | cpuconsumptiontime: 245292 s
[2024-05-17 03:48:17] 2024-05-17 10:48:02,461 | INFO     | nevents: 1850
[2024-05-17 03:48:17] 2024-05-17 10:48:02,461 | INFO     | neventsw: 0
[2024-05-17 03:48:17] 2024-05-17 10:48:02,461 | INFO     | pid: 19134
[2024-05-17 03:48:17] 2024-05-17 10:48:02,461 | INFO     | pgrp: 19134
[2024-05-17 03:48:17] 2024-05-17 10:48:02,461 | INFO     | corecount: 12
[2024-05-17 03:48:17] 2024-05-17 10:48:02,461 | INFO     | event service: False
[2024-05-17 03:48:17] 2024-05-17 10:48:02,461 | INFO     | sizes: {0: 2391730, 1: 2392665, 9: 2392871, 12: 2392899, 51817: 2458346, 51822: 2467484, 51828: 2467650}
[2024-05-17 03:48:17] 2024-05-17 10:48:02,461 | INFO     | --------------------------------------------------
[2024-05-17 03:48:17] 2024-05-17 10:48:02,462 | INFO     | 
[2024-05-17 03:48:17] 2024-05-17 10:48:02,462 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-17 03:48:17] 2024-05-17 10:48:02,490 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,491 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,491 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,491 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,491 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,491 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,491 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,492 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,492 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,492 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,492 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,492 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,492 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,492 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,493 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,493 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 03:48:17] 2024-05-17 10:48:02,493 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,493 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 03:48:17] 2024-05-17 10:48:02,493 | INFO     | job 6201770389 has completed (purged errors)
[2024-05-17 03:48:17] 2024-05-17 10:48:02,493 | INFO     | overall cleanup function is called
[2024-05-17 03:48:17] 2024-05-17 10:48:03,511 | INFO     | --- collectZombieJob: --- 10, [19134]
[2024-05-17 03:48:17] 2024-05-17 10:48:03,512 | INFO     | zombie collector waiting for pid 19134
[2024-05-17 03:48:17] 2024-05-17 10:48:03,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 03:48:17] 2024-05-17 10:48:04,516 | INFO     | collected zombie processes
[2024-05-17 03:48:17] 2024-05-17 10:48:04,517 | INFO     | will now attempt to kill all subprocesses of pid=19134
[2024-05-17 03:48:17] 2024-05-17 10:48:04,702 | INFO     | process IDs to be killed: [19134] (in reverse order)
[2024-05-17 03:48:17] 2024-05-17 10:48:04,822 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 03:48:17] 2024-05-17 10:48:04,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 03:48:17] 2024-05-17 10:48:04,835 | INFO     | did not find any defunct processes belonging to 19134
[2024-05-17 03:48:17] 2024-05-17 10:48:04,841 | INFO     | did not find any defunct processes belonging to 19134
[2024-05-17 03:48:17] 2024-05-17 10:48:04,841 | INFO     | ready for new job
[2024-05-17 03:48:17] 2024-05-17 10:48:04,841 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 03:48:17] 2024-05-17 10:48:04,845 | INFO     | *************************************
[2024-05-17 03:48:17] 2024-05-17 10:48:04,845 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 03:48:17] 2024-05-17 10:48:04,845 | INFO     | *************************************
[2024-05-17 03:48:17] 2024-05-17 10:48:04,845 | INFO     | 
[2024-05-17 03:48:17] 2024-05-17 10:48:04,851 | INFO     | architecture information:
[2024-05-17 03:48:17] 2024-05-17 10:48:04,852 | INFO     | executing command: cat /etc/os-release
[2024-05-17 03:48:17] 2024-05-17 10:48:04,875 | INFO     | cat /etc/os-release:
[2024-05-17 03:48:17] NAME="CentOS Linux"
[2024-05-17 03:48:17] VERSION="7 (Core)"
[2024-05-17 03:48:17] ID="centos"
[2024-05-17 03:48:17] ID_LIKE="rhel fedora"
[2024-05-17 03:48:17] VERSION_ID="7"
[2024-05-17 03:48:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 03:48:17] ANSI_COLOR="0;31"
[2024-05-17 03:48:17] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 03:48:17] HOME_URL="https://www.centos.org/"
[2024-05-17 03:48:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 03:48:17] 
[2024-05-17 03:48:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 03:48:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 03:48:17] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 03:48:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 03:48:17] 
[2024-05-17 03:48:17] 2024-05-17 10:48:04,875 | INFO     | *************************************
[2024-05-17 03:48:17] 2024-05-17 10:48:05,378 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-17 03:48:17] 2024-05-17 10:48:05,405 | INFO     | sufficient remaining disk space (2217583050752 B)
[2024-05-17 03:48:17] 2024-05-17 10:48:05,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 03:48:17] 2024-05-17 10:48:05,406 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 03:48:17] 2024-05-17 10:48:05,406 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 03:48:17] 2024-05-17 10:48:05,406 | INFO     | aborting loop
[2024-05-17 03:48:17] 2024-05-17 10:48:06,052 | INFO     | all data control threads have been joined
[2024-05-17 03:48:17] 2024-05-17 10:48:06,211 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 03:48:17] 2024-05-17 10:48:06,211 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 03:48:17] 2024-05-17 10:48:06,211 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 03:48:17] 2024-05-17 10:48:06,371 | INFO     | all job control threads have been joined
[2024-05-17 03:48:17] 2024-05-17 10:48:06,410 | INFO     | [job] retrieve thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:06,412 | INFO     | [job] job monitor thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:06,461 | INFO     | all payload control threads have been joined
[2024-05-17 03:48:17] 2024-05-17 10:48:06,737 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:06,771 | INFO     | [data] copytool_in thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:06,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 03:48:17] 2024-05-17 10:48:06,850 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 03:48:17] 2024-05-17 10:48:06,878 | INFO     | [payload] validate_post thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:07,058 | INFO     | [data] control thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:07,315 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:07,373 | INFO     | [job] control thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:07,466 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 03:48:17] 2024-05-17 10:48:07,466 | INFO     | [payload] control thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:07,514 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:07,585 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:07,724 | INFO     | [job] validate thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:07,991 | INFO     | [payload] failed_post thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:08,471 | INFO     | [job] queue monitor thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:08,778 | INFO     | [data] copytool_out thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:10,855 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 03:48:17] 2024-05-17 10:48:11,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140662645086016)>', '<ExcThread(monitor, started 140662351570688)>']
[2024-05-17 03:48:17] 2024-05-17 10:48:12,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 03:48:17] 2024-05-17 10:48:12,227 | INFO     | [monitor] control thread has ended
[2024-05-17 03:48:17] 2024-05-17 10:48:16,348 | INFO     | all workflow threads have been joined
[2024-05-17 03:48:17] 2024-05-17 10:48:16,349 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 03:48:17] 2024-05-17 10:48:16,350 | INFO     | traces error code: 0
[2024-05-17 03:48:17] 2024-05-17 10:48:16,350 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 03:48:17] 2024-05-17 10:48:16,460 [wrapper] ==== pilot stdout END ====
[2024-05-17 03:48:17] 2024-05-17 10:48:16,465 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 03:48:17] 2024-05-17 10:48:16,469 [wrapper] pilotpid: 7946
[2024-05-17 03:48:17] 2024-05-17 10:48:16,473 [wrapper] Pilot exit status: 0
[2024-05-17 03:48:17] 2024-05-17 10:48:16,488 [wrapper] pandaids: 6201770389
[2024-05-17 03:48:17] 2024-05-17 10:48:16,569 [wrapper] cleanup: SIGTERM to supervisor_pilot 259345 7947
[2024-05-17 03:48:17] 2024-05-17 10:48:16,574 [wrapper] Test setup, not cleaning
[2024-05-17 03:48:17] 2024-05-17 10:48:16,578 [wrapper] ==== wrapper stdout END ====
[2024-05-17 03:48:17] 2024-05-17 10:48:16,582 [wrapper] ==== wrapper stderr END ====
[2024-05-17 03:48:17] 2024-05-17 10:48:16,590 [wrapper] apfmon messages muted
[2024-05-17 03:48:17]  *** Error codes and diagnostics ***
[2024-05-17 03:48:17]     "exeErrorCode": 0,
[2024-05-17 03:48:17]     "exeErrorDiag": "",
[2024-05-17 03:48:17]     "pilotErrorCode": 0,
[2024-05-17 03:48:17]     "pilotErrorDiag": "",
[2024-05-17 03:48:17]  *** Listing of results directory ***
[2024-05-17 03:48:17] total 1444016
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc     467845 May 10 10:45 pilot3.tar.gz
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc       5633 May 10 10:48 queuedata.json
[2024-05-17 03:48:17] -rwx------ 1 boinc boinc      32251 May 10 10:49 runpilot2-wrapper.sh
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc        100 May 16 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 03:48:17] -rwxr-xr-x 1 boinc boinc       7986 May 16 13:23 run_atlas
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc        105 May 16 13:23 job.xml
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc       6621 May 16 13:23 init_data.xml
[2024-05-17 03:48:17] -rw-r--r-- 2 boinc boinc  329612541 May 16 13:23 EVNT.38734051._000627.pool.root.1
[2024-05-17 03:48:17] drwxrwx--x 2 boinc boinc       4096 May 16 13:23 shared
[2024-05-17 03:48:17] -rw-r--r-- 2 boinc boinc     480175 May 16 13:23 input.tar.gz
[2024-05-17 03:48:17] -rw-r--r-- 2 boinc boinc      17537 May 16 13:23 start_atlas.sh
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc          0 May 16 13:23 boinc_lockfile
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc       2853 May 16 13:23 pandaJob.out
[2024-05-17 03:48:17] -rw------- 1 boinc boinc        424 May 16 13:23 setup.sh.local
[2024-05-17 03:48:17] -rw------- 1 boinc boinc    1019286 May 16 13:23 agis_schedconf.cvmfs.json
[2024-05-17 03:48:17] -rw------- 1 boinc boinc    1324701 May 16 13:23 cric_ddmendpoints.json
[2024-05-17 03:48:17] drwx------ 4 boinc boinc       4096 May 16 13:23 pilot3
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc        533 May 17 03:36 boinc_task_state.xml
[2024-05-17 03:48:17] -rw------- 1 boinc boinc 1130740904 May 17 03:47 HITS.38734053._004499.pool.root.1
[2024-05-17 03:48:17] -rw------- 1 boinc boinc       1079 May 17 03:47 memory_monitor_summary.json
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc       8192 May 17 03:47 boinc_mmap_file
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc         29 May 17 03:47 wrapper_checkpoint.txt
[2024-05-17 03:48:17] -rw------- 1 boinc boinc          0 May 17 03:47 agis_ddmendpoints.agis.ALL.json
[2024-05-17 03:48:17] -rw------- 1 boinc boinc    2646686 May 17 03:47 log.38734053._004499.job.log.tgz.1
[2024-05-17 03:48:17] -rw------- 1 boinc boinc      28007 May 17 03:48 heartbeat.json
[2024-05-17 03:48:17] -rw------- 1 boinc boinc         95 May 17 03:48 pilot_heartbeat.json
[2024-05-17 03:48:17] -rw------- 1 boinc boinc       4210 May 17 03:48 pilotlog.txt
[2024-05-17 03:48:17] -rw------- 1 boinc boinc    4725954 May 17 03:48 log.38734053._004499.job.log.1
[2024-05-17 03:48:17] -rw------- 1 boinc boinc        353 May 17 03:48 output.list
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc        620 May 17 03:48 runtime_log
[2024-05-17 03:48:17] -rw------- 1 boinc boinc    7413760 May 17 03:48 result.tar.gz
[2024-05-17 03:48:17] -rw------- 1 boinc boinc        664 May 17 03:48 UL9NDmhYjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmBxIKDm9ELRBn.diag
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc      11287 May 17 03:48 runtime_log.err
[2024-05-17 03:48:17] -rw-r--r-- 1 boinc boinc      22164 May 17 03:48 stderr.txt
[2024-05-17 03:48:17] HITS file was successfully produced:
[2024-05-17 03:48:17] -rw------- 1 boinc boinc 1130740904 May 17 03:47 shared/HITS.pool.root.1
[2024-05-17 03:48:17]  *** Contents of shared directory: ***
[2024-05-17 03:48:17] total 1433868
[2024-05-17 03:48:17] -rw-r--r-- 2 boinc boinc  329612541 May 16 13:23 ATLAS.root_0
[2024-05-17 03:48:17] -rw-r--r-- 2 boinc boinc     480175 May 16 13:23 input.tar.gz
[2024-05-17 03:48:17] -rw-r--r-- 2 boinc boinc      17537 May 16 13:23 start_atlas.sh
[2024-05-17 03:48:17] -rw------- 1 boinc boinc 1130740904 May 17 03:47 HITS.pool.root.1
[2024-05-17 03:48:17] -rw------- 1 boinc boinc    7413760 May 17 03:48 result.tar.gz
03:48:18 (2241): run_atlas exited; CPU time 240037.337481
03:48:18 (2241): called boinc_finish(0)

</stderr_txt>
]]>

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