Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:31:44 (1422528): wrapper (7.7.26015): starting
00:31:44 (1422528): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 00:31:44] Arguments: --nthreads 4
[2024-05-16 00:31:44] Threads: 4
[2024-05-16 00:31:44] Checking for CVMFS
[2024-05-16 00:31:44] No cvmfs_config command found, will try listing directly
[2024-05-16 00:31:44] CVMFS is ok
[2024-05-16 00:31:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 00:31:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 00:31:44] Further information can be found at the LHC@home message board.
[2024-05-16 00:31:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 00:31:44] Checking for apptainer binary...
[2024-05-16 00:31:44] which: no apptainer in ((null))
[2024-05-16 00:31:44] apptainer is not installed, using version from CVMFS
[2024-05-16 00:31:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 00:31:45] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-16 00:31:45] apptainer works
[2024-05-16 00:31:45] Set ATHENA_PROC_NUMBER=4
[2024-05-16 00:31:45] Set ATHENA_CORE_NUMBER=4
[2024-05-16 00:31:45] Starting ATLAS job with PandaID=6201769873
[2024-05-16 00:31:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 21:34:02]  *** The last 200 lines of the pilot log: ***
[2024-05-16 21:34:02] 2024-05-16 19:33:37,028 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 21:34:02] 2024-05-16 19:33:37,028 | INFO     | job 6201769873 has finished - writing final server update
[2024-05-16 21:34:02] 2024-05-16 19:33:37,029 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2387485/.job.ad'
[2024-05-16 21:34:02] 2024-05-16 19:33:37,029 | INFO     | total number of processed events: 1850 (read)
[2024-05-16 21:34:02] 2024-05-16 19:33:37,032 | INFO     | executing command: lscpu
[2024-05-16 21:34:02] 2024-05-16 19:33:37,083 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-05-16 21:34:02] 2024-05-16 19:33:37,083 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 21:34:02] 2024-05-16 19:33:37,128 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 21:34:02] 2024-05-16 19:33:39,415 | INFO     | monitor loop #5695: job 0:6201769873 is in state 'finished'
[2024-05-16 21:34:02] 2024-05-16 19:33:39,416 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 21:34:02] 2024-05-16 19:33:41,919 | INFO     | monitor loop #5696: job 0:6201769873 is in state 'finished'
[2024-05-16 21:34:02] 2024-05-16 19:33:41,919 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 21:34:02] 2024-05-16 19:33:44,423 | INFO     | monitor loop #5697: job 0:6201769873 is in state 'finished'
[2024-05-16 21:34:02] 2024-05-16 19:33:44,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 21:34:02] 2024-05-16 19:33:46,928 | INFO     | monitor loop #5698: job 0:6201769873 is in state 'finished'
[2024-05-16 21:34:02] 2024-05-16 19:33:46,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 21:34:02] 2024-05-16 19:33:48,963 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-16 21:34:02] 2024-05-16 19:33:48,963 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6201769873/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 21:34:02] 2024-05-16 19:33:48,964 | INFO     | extracted standard info from prmon json
[2024-05-16 21:34:02] 2024-05-16 19:33:48,964 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 21:34:02] 2024-05-16 19:33:48,964 | WARNING  | GPU info not found in prmon json
[2024-05-16 21:34:02] 2024-05-16 19:33:48,985 | INFO     | fitting pss+swap vs Time
[2024-05-16 21:34:02] 2024-05-16 19:33:48,986 | INFO     | model: linear, x: [1715812341.0, 1715812402.0, 1715812463.0, 1715812524.0, 1715812585.0, 1715812646.0, 1715812707.0, 1715812768.0, 1715812829.0, 1715812890.0, 1715
[2024-05-16 21:34:02] 2024-05-16 19:33:48,987 | INFO     | sum of square deviations: 592643412337.996
[2024-05-16 21:34:02] 2024-05-16 19:33:49,022 | INFO     | sum of deviations: 2446845635193.876
[2024-05-16 21:34:02] 2024-05-16 19:33:49,022 | INFO     | mean x: 1715850161.0016117
[2024-05-16 21:34:02] 2024-05-16 19:33:49,022 | INFO     | mean y: 2631332.563255439
[2024-05-16 21:34:02] 2024-05-16 19:33:49,022 | INFO     | -- intersect: -7081595691.121373
[2024-05-16 21:34:02] 2024-05-16 19:33:49,022 | INFO     | intersect: -7081595691.121373
[2024-05-16 21:34:02] 2024-05-16 19:33:49,024 | INFO     | chi2: 14.631934535321816
[2024-05-16 21:34:02] 2024-05-16 19:33:49,025 | INFO     | model: linear, x: [1715812341.0, 1715812402.0, 1715812463.0, 1715812524.0, 1715812585.0, 1715812646.0, 1715812707.0, 1715812768.0, 1715812829.0, 1715812890.0, 1715
[2024-05-16 21:34:02] 2024-05-16 19:33:49,026 | INFO     | sum of square deviations: 585508934992.9965
[2024-05-16 21:34:02] 2024-05-16 19:33:49,059 | INFO     | sum of deviations: 2794144057955.964
[2024-05-16 21:34:02] 2024-05-16 19:33:49,059 | INFO     | mean x: 1715850008.5016181
[2024-05-16 21:34:02] 2024-05-16 19:33:49,059 | INFO     | mean y: 2638756.5210355986
[2024-05-16 21:34:02] 2024-05-16 19:33:49,059 | INFO     | -- intersect: -8185677115.474724
[2024-05-16 21:34:02] 2024-05-16 19:33:49,059 | INFO     | intersect: -8185677115.474724
[2024-05-16 21:34:02] 2024-05-16 19:33:49,061 | INFO     | chi2: 12.100289205243012
[2024-05-16 21:34:02] 2024-05-16 19:33:49,061 | INFO     | current chi2=12.100289205243012 (change=17.302191476918903 %)
[2024-05-16 21:34:02] 2024-05-16 19:33:49,061 | INFO     | right removable region: 1235
[2024-05-16 21:34:02] 2024-05-16 19:33:49,062 | INFO     | model: linear, x: [1715812646.0, 1715812707.0, 1715812768.0, 1715812829.0, 1715812890.0, 1715812951.0, 1715813012.0, 1715813073.0, 1715813134.0, 1715813195.0, 1715
[2024-05-16 21:34:02] 2024-05-16 19:33:49,063 | INFO     | sum of square deviations: 585508933772.9965
[2024-05-16 21:34:02] 2024-05-16 19:33:49,095 | INFO     | sum of deviations: 2056717239229.171
[2024-05-16 21:34:02] 2024-05-16 19:33:49,096 | INFO     | mean x: 1715850313.5016181
[2024-05-16 21:34:02] 2024-05-16 19:33:49,096 | INFO     | mean y: 2639669.164239482
[2024-05-16 21:34:02] 2024-05-16 19:33:49,096 | INFO     | -- intersect: -6024627749.241653
[2024-05-16 21:34:02] 2024-05-16 19:33:49,096 | INFO     | intersect: -6024627749.241653
[2024-05-16 21:34:02] 2024-05-16 19:33:49,097 | INFO     | chi2: 11.441838468846944
[2024-05-16 21:34:02] 2024-05-16 19:33:49,098 | INFO     | current chi2=11.441838468846944 (change=21.802284986813667 %)
[2024-05-16 21:34:02] 2024-05-16 19:33:49,098 | INFO     | left removable region: 10
[2024-05-16 21:34:02] 2024-05-16 19:33:49,099 | INFO     | model: linear, x: [1715812951.0, 1715813012.0, 1715813073.0, 1715813134.0, 1715813195.0, 1715813256.0, 1715813317.0, 1715813378.0, 1715813439.0, 1715813500.0, 1715
[2024-05-16 21:34:02] 2024-05-16 19:33:49,099 | INFO     | sum of square deviations: 570015117810.006
[2024-05-16 21:34:02] 2024-05-16 19:33:49,132 | INFO     | sum of deviations: 2154502237693.5803
[2024-05-16 21:34:02] 2024-05-16 19:33:49,132 | INFO     | mean x: 1715850283.0016327
[2024-05-16 21:34:02] 2024-05-16 19:33:49,132 | INFO     | mean y: 2655949.7085714284
[2024-05-16 21:34:02] 2024-05-16 19:33:49,132 | INFO     | -- intersect: -6482791819.601955
[2024-05-16 21:34:02] 2024-05-16 19:33:49,132 | INFO     | intersect: -6482791819.601955
[2024-05-16 21:34:02] 2024-05-16 19:33:49,134 | INFO     | chi2: 6.136006358055712
[2024-05-16 21:34:02] 2024-05-16 19:33:49,134 | INFO     | -- intersect: -6482791819.601955
[2024-05-16 21:34:02] 2024-05-16 19:33:49,134 | INFO     | current memory leak: 3.78 B/s (using 1225 data points, chi2=6.14)
[2024-05-16 21:34:02] 2024-05-16 19:33:49,135 | INFO     | ..............................
[2024-05-16 21:34:02] 2024-05-16 19:33:49,136 | INFO     | . Timing measurements:
[2024-05-16 21:34:02] 2024-05-16 19:33:49,136 | INFO     | . get job = 0 s
[2024-05-16 21:34:02] 2024-05-16 19:33:49,136 | INFO     | . initial setup = 1 s
[2024-05-16 21:34:02] 2024-05-16 19:33:49,136 | INFO     | . payload setup = 8 s
[2024-05-16 21:34:02] 2024-05-16 19:33:49,136 | INFO     | . stage-in = 0 s
[2024-05-16 21:34:02] 2024-05-16 19:33:49,136 | INFO     | . payload execution = 75671 s
[2024-05-16 21:34:02] 2024-05-16 19:33:49,136 | INFO     | . stage-out = 3 s
[2024-05-16 21:34:02] 2024-05-16 19:33:49,136 | INFO     | . log creation = 0 s
[2024-05-16 21:34:02] 2024-05-16 19:33:49,136 | INFO     | ..............................
[2024-05-16 21:34:02] 2024-05-16 19:33:49,232 | INFO     | 
[2024-05-16 21:34:02] 2024-05-16 19:33:49,232 | INFO     | job summary report
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | --------------------------------------------------
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | PanDA job id: 6201769873
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | task id: 38734053
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | errors: (none)
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | pilot state: finished 
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | transexitcode: 0
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | exeerrorcode: 0
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | exeerrordiag: 
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | exitcode: 0
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | exitmsg: OK
[2024-05-16 21:34:02] 2024-05-16 19:33:49,233 | INFO     | cpuconsumptiontime: 296304 s
[2024-05-16 21:34:02] 2024-05-16 19:33:49,234 | INFO     | nevents: 1850
[2024-05-16 21:34:02] 2024-05-16 19:33:49,234 | INFO     | neventsw: 0
[2024-05-16 21:34:02] 2024-05-16 19:33:49,234 | INFO     | pid: 1436678
[2024-05-16 21:34:02] 2024-05-16 19:33:49,234 | INFO     | pgrp: 1436678
[2024-05-16 21:34:02] 2024-05-16 19:33:49,234 | INFO     | corecount: 4
[2024-05-16 21:34:02] 2024-05-16 19:33:49,234 | INFO     | event service: False
[2024-05-16 21:34:02] 2024-05-16 19:33:49,234 | INFO     | sizes: {0: 2392651, 4: 2392857, 11: 2392885, 75684: 2471474, 75687: 2480456, 75688: 2480512, 75701: 2480862}
[2024-05-16 21:34:02] 2024-05-16 19:33:49,234 | INFO     | --------------------------------------------------
[2024-05-16 21:34:02] 2024-05-16 19:33:49,234 | INFO     | 
[2024-05-16 21:34:02] 2024-05-16 19:33:49,234 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2024-05-16 21:34:02] 2024-05-16 19:33:49,261 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,263 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 21:34:02] 2024-05-16 19:33:49,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,263 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 21:34:02] 2024-05-16 19:33:49,263 | INFO     | job 6201769873 has completed (purged errors)
[2024-05-16 21:34:02] 2024-05-16 19:33:49,263 | INFO     | overall cleanup function is called
[2024-05-16 21:34:02] 2024-05-16 19:33:50,276 | INFO     | --- collectZombieJob: --- 10, [1436678]
[2024-05-16 21:34:02] 2024-05-16 19:33:50,276 | INFO     | zombie collector waiting for pid 1436678
[2024-05-16 21:34:02] 2024-05-16 19:33:50,276 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 21:34:02] 2024-05-16 19:33:51,281 | INFO     | collected zombie processes
[2024-05-16 21:34:02] 2024-05-16 19:33:51,281 | INFO     | will now attempt to kill all subprocesses of pid=1436678
[2024-05-16 21:34:02] 2024-05-16 19:33:51,501 | INFO     | process IDs to be killed: [1436678] (in reverse order)
[2024-05-16 21:34:02] 2024-05-16 19:33:51,654 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 21:34:02] 2024-05-16 19:33:51,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 21:34:02] 2024-05-16 19:33:51,665 | INFO     | did not find any defunct processes belonging to 1436678
[2024-05-16 21:34:02] 2024-05-16 19:33:51,676 | INFO     | did not find any defunct processes belonging to 1436678
[2024-05-16 21:34:02] 2024-05-16 19:33:51,676 | INFO     | ready for new job
[2024-05-16 21:34:02] 2024-05-16 19:33:51,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 21:34:02] 2024-05-16 19:33:51,683 | INFO     | *************************************
[2024-05-16 21:34:02] 2024-05-16 19:33:51,683 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 21:34:02] 2024-05-16 19:33:51,683 | INFO     | *************************************
[2024-05-16 21:34:02] 2024-05-16 19:33:51,683 | INFO     | 
[2024-05-16 21:34:02] 2024-05-16 19:33:51,687 | INFO     | architecture information:
[2024-05-16 21:34:02] 2024-05-16 19:33:51,688 | INFO     | executing command: cat /etc/os-release
[2024-05-16 21:34:02] 2024-05-16 19:33:51,707 | INFO     | cat /etc/os-release:
[2024-05-16 21:34:02] NAME="CentOS Linux"
[2024-05-16 21:34:02] VERSION="7 (Core)"
[2024-05-16 21:34:02] ID="centos"
[2024-05-16 21:34:02] ID_LIKE="rhel fedora"
[2024-05-16 21:34:02] VERSION_ID="7"
[2024-05-16 21:34:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 21:34:02] ANSI_COLOR="0;31"
[2024-05-16 21:34:02] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 21:34:02] HOME_URL="https://www.centos.org/"
[2024-05-16 21:34:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 21:34:02] 
[2024-05-16 21:34:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 21:34:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 21:34:02] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 21:34:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 21:34:02] 
[2024-05-16 21:34:02] 2024-05-16 19:33:51,707 | INFO     | *************************************
[2024-05-16 21:34:02] 2024-05-16 19:33:52,209 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2024-05-16 21:34:02] 2024-05-16 19:33:52,231 | INFO     | sufficient remaining disk space (549325897728 B)
[2024-05-16 21:34:02] 2024-05-16 19:33:52,231 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 21:34:02] 2024-05-16 19:33:52,231 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 21:34:02] 2024-05-16 19:33:52,231 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 21:34:02] 2024-05-16 19:33:52,879 | INFO     | all data control threads have been joined
[2024-05-16 21:34:02] 2024-05-16 19:33:52,928 | INFO     | all job control threads have been joined
[2024-05-16 21:34:02] 2024-05-16 19:33:52,945 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 21:34:02] 2024-05-16 19:33:52,945 | INFO     | aborting loop
[2024-05-16 21:34:02] 2024-05-16 19:33:53,230 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 21:34:02] 2024-05-16 19:33:53,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 21:34:02] 2024-05-16 19:33:53,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 21:34:02] 2024-05-16 19:33:53,236 | INFO     | [job] retrieve thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:53,250 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:53,550 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 21:34:02] 2024-05-16 19:33:53,600 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:53,640 | INFO     | all payload control threads have been joined
[2024-05-16 21:34:02] 2024-05-16 19:33:53,732 | INFO     | [payload] validate_post thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:53,842 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:53,884 | INFO     | [data] control thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:53,933 | INFO     | [job] control thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:53,950 | INFO     | [job] job monitor thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:54,178 | INFO     | [job] validate thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:54,189 | INFO     | [data] copytool_in thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:54,189 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:54,242 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 21:34:02] 2024-05-16 19:33:54,506 | INFO     | [payload] failed_post thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:54,645 | INFO     | [payload] control thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:55,247 | INFO     | [job] queue monitor thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:55,555 | INFO     | [data] copytool_out thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:56,237 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 21:34:02] 2024-05-16 19:33:56,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47600721556544)>', '<ExcThread(monitor, started 47600894908160)>']
[2024-05-16 21:34:02] 2024-05-16 19:33:57,250 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 21:34:02] 2024-05-16 19:33:57,250 | INFO     | [monitor] control thread has ended
[2024-05-16 21:34:02] 2024-05-16 19:34:01,684 | INFO     | all workflow threads have been joined
[2024-05-16 21:34:02] 2024-05-16 19:34:01,684 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 21:34:02] 2024-05-16 19:34:01,685 | INFO     | traces error code: 0
[2024-05-16 21:34:02] 2024-05-16 19:34:01,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 21:34:02] 2024-05-16 19:34:01,772 [wrapper] ==== pilot stdout END ====
[2024-05-16 21:34:02] 2024-05-16 19:34:01,774 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 21:34:02] 2024-05-16 19:34:01,797 [wrapper] pilotpid: 1426932
[2024-05-16 21:34:02] 2024-05-16 19:34:01,800 [wrapper] Pilot exit status: 0
[2024-05-16 21:34:02] 2024-05-16 19:34:01,855 [wrapper] pandaids: 6201769873
[2024-05-16 21:34:02] 2024-05-16 19:34:01,951 [wrapper] cleanup: SIGTERM to supervisor_pilot  218869 1426933
[2024-05-16 21:34:02] 2024-05-16 19:34:01,955 [wrapper] Test setup, not cleaning
[2024-05-16 21:34:02] 2024-05-16 19:34:01,959 [wrapper] ==== wrapper stdout END ====
[2024-05-16 21:34:02] 2024-05-16 19:34:01,964 [wrapper] ==== wrapper stderr END ====
[2024-05-16 21:34:02] 2024-05-16 19:34:01,975 [wrapper] apfmon messages muted
[2024-05-16 21:34:02]  *** Error codes and diagnostics ***
[2024-05-16 21:34:02]     "exeErrorCode": 0,
[2024-05-16 21:34:02]     "exeErrorDiag": "",
[2024-05-16 21:34:02]     "pilotErrorCode": 0,
[2024-05-16 21:34:02]     "pilotErrorDiag": "",
[2024-05-16 21:34:02]  *** Listing of results directory ***
[2024-05-16 21:34:02] total 1446656
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc     467845 May 10 19:45 pilot3.tar.gz
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc       5633 May 10 19:47 queuedata.json
[2024-05-16 21:34:02] -rwx------ 1 boinc boinc      32251 May 10 19:48 runpilot2-wrapper.sh
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc        100 May 16 00:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 21:34:02] -rwxr-xr-x 1 boinc boinc       7986 May 16 00:31 run_atlas
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc        105 May 16 00:31 job.xml
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc       6663 May 16 00:31 init_data.xml
[2024-05-16 21:34:02] -rw-r--r-- 2 boinc boinc  326423353 May 16 00:31 EVNT.38734051._000610.pool.root.1
[2024-05-16 21:34:02] -rw-r--r-- 2 boinc boinc      17537 May 16 00:31 start_atlas.sh
[2024-05-16 21:34:02] drwxrwx--x 2 boinc boinc       4096 May 16 00:31 shared
[2024-05-16 21:34:02] -rw-r--r-- 2 boinc boinc     480166 May 16 00:31 input.tar.gz
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc          0 May 16 00:31 boinc_lockfile
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc       2853 May 16 00:31 pandaJob.out
[2024-05-16 21:34:02] -rw------- 1 boinc boinc        424 May 16 00:31 setup.sh.local
[2024-05-16 21:34:02] -rw------- 1 boinc boinc    1011339 May 16 00:31 agis_schedconf.cvmfs.json
[2024-05-16 21:34:02] -rw------- 1 boinc boinc    1324701 May 16 00:31 cric_ddmendpoints.json
[2024-05-16 21:34:02] drwx------ 4 boinc boinc       4096 May 16 00:31 pilot3
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc        533 May 16 21:23 boinc_task_state.xml
[2024-05-16 21:34:02] -rw------- 1 boinc boinc 1120244711 May 16 21:33 HITS.38734053._004473.pool.root.1
[2024-05-16 21:34:02] -rw------- 1 boinc boinc       1059 May 16 21:33 memory_monitor_summary.json
[2024-05-16 21:34:02] -rw------- 1 boinc boinc          0 May 16 21:33 agis_ddmendpoints.agis.ALL.json
[2024-05-16 21:34:02] -rw------- 1 boinc boinc    2122733 May 16 21:33 log.38734053._004473.job.log.tgz.1
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc         29 May 16 21:33 wrapper_checkpoint.txt
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc       8192 May 16 21:33 boinc_mmap_file
[2024-05-16 21:34:02] -rw------- 1 boinc boinc      27749 May 16 21:33 heartbeat.json
[2024-05-16 21:34:02] -rw------- 1 boinc boinc         95 May 16 21:33 pilot_heartbeat.json
[2024-05-16 21:34:02] -rw------- 1 boinc boinc       4221 May 16 21:34 pilotlog.txt
[2024-05-16 21:34:02] -rw------- 1 boinc boinc   13448357 May 16 21:34 log.38734053._004473.job.log.1
[2024-05-16 21:34:02] -rw------- 1 boinc boinc        353 May 16 21:34 output.list
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc        620 May 16 21:34 runtime_log
[2024-05-16 21:34:02] -rw------- 1 boinc boinc   15605760 May 16 21:34 result.tar.gz
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc      11410 May 16 21:34 runtime_log.err
[2024-05-16 21:34:02] -rw------- 1 boinc boinc        665 May 16 21:34 auQLDmDXjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmbwIKDm3GrKzn.diag
[2024-05-16 21:34:02] -rw-r--r-- 1 boinc boinc      21776 May 16 21:34 stderr.txt
[2024-05-16 21:34:02] HITS file was successfully produced:
[2024-05-16 21:34:02] -rw------- 1 boinc boinc 1120244711 May 16 21:33 shared/HITS.pool.root.1
[2024-05-16 21:34:02]  *** Contents of shared directory: ***
[2024-05-16 21:34:02] total 1428508
[2024-05-16 21:34:02] -rw-r--r-- 2 boinc boinc  326423353 May 16 00:31 ATLAS.root_0
[2024-05-16 21:34:02] -rw-r--r-- 2 boinc boinc      17537 May 16 00:31 start_atlas.sh
[2024-05-16 21:34:02] -rw-r--r-- 2 boinc boinc     480166 May 16 00:31 input.tar.gz
[2024-05-16 21:34:02] -rw------- 1 boinc boinc 1120244711 May 16 21:33 HITS.pool.root.1
[2024-05-16 21:34:02] -rw------- 1 boinc boinc   15605760 May 16 21:34 result.tar.gz
21:34:04 (1422528): run_atlas exited; CPU time 293976.137895
21:34:04 (1422528): called boinc_finish(0)

</stderr_txt>
]]>

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