Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:02:02 (1826765): wrapper (7.7.26015): starting
10:02:02 (1826765): wrapper: running run_atlas (--nthreads 4)
[2024-05-17 10:02:02] Arguments: --nthreads 4
[2024-05-17 10:02:02] Threads: 4
[2024-05-17 10:02:02] Checking for CVMFS
[2024-05-17 10:02:02] No cvmfs_config command found, will try listing directly
[2024-05-17 10:02:02] CVMFS is ok
[2024-05-17 10:02:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-17 10:02:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-17 10:02:02] Further information can be found at the LHC@home message board.
[2024-05-17 10:02:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-17 10:02:02] Checking for apptainer binary...
[2024-05-17 10:02:02] which: no apptainer in ((null))
[2024-05-17 10:02:02] apptainer is not installed, using version from CVMFS
[2024-05-17 10:02:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-17 10:02:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-17 10:02:03] apptainer works
[2024-05-17 10:02:03] Set ATHENA_PROC_NUMBER=4
[2024-05-17 10:02:03] Set ATHENA_CORE_NUMBER=4
[2024-05-17 10:02:03] Starting ATLAS job with PandaID=6201765992
[2024-05-17 10:02:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-17 13:22:30]  *** The last 200 lines of the pilot log: ***
[2024-05-17 13:22:30] 2024-05-17 11:22:09,364 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-17 13:22:30] 2024-05-17 11:22:09,364 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-17 13:22:30] 2024-05-17 11:22:09,367 | INFO     | fitting pss+swap vs Time
[2024-05-17 13:22:30] 2024-05-17 11:22:09,368 | INFO     | model: linear, x: [1715932958.0, 1715933019.0, 1715933080.0, 1715933141.0, 1715933202.0, 1715933263.0, 1715933324.0, 1715933385.0, 1715933446.0, 1715933507.0, 1715
[2024-05-17 13:22:30] 2024-05-17 11:22:09,368 | INFO     | sum of square deviations: 2370641658.0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,369 | INFO     | sum of deviations: 80956144204.99998
[2024-05-17 13:22:30] 2024-05-17 11:22:09,369 | INFO     | mean x: 1715938936.0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,369 | INFO     | mean y: 2271137.54822335
[2024-05-17 13:22:30] 2024-05-17 11:22:09,370 | INFO     | -- intersect: -58596125410.91496
[2024-05-17 13:22:30] 2024-05-17 11:22:09,370 | INFO     | intersect: -58596125410.91496
[2024-05-17 13:22:30] 2024-05-17 11:22:09,370 | INFO     | chi2: 5.094364080230539
[2024-05-17 13:22:30] 2024-05-17 11:22:09,370 | INFO     | model: linear, x: [1715932958.0, 1715933019.0, 1715933080.0, 1715933141.0, 1715933202.0, 1715933263.0, 1715933324.0, 1715933385.0, 1715933446.0, 1715933507.0, 1715
[2024-05-17 13:22:30] 2024-05-17 11:22:09,370 | INFO     | sum of square deviations: 2194675568.0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,371 | INFO     | sum of deviations: 91173020815.5
[2024-05-17 13:22:30] 2024-05-17 11:22:09,372 | INFO     | mean x: 1715938783.5
[2024-05-17 13:22:30] 2024-05-17 11:22:09,372 | INFO     | mean y: 2279766.8489583335
[2024-05-17 13:22:30] 2024-05-17 11:22:09,372 | INFO     | -- intersect: -71282663077.2267
[2024-05-17 13:22:30] 2024-05-17 11:22:09,372 | INFO     | intersect: -71282663077.2267
[2024-05-17 13:22:30] 2024-05-17 11:22:09,372 | INFO     | chi2: 4.301052131322244
[2024-05-17 13:22:30] 2024-05-17 11:22:09,372 | INFO     | current chi2=4.301052131322244 (change=15.572344976026816 %)
[2024-05-17 13:22:30] 2024-05-17 11:22:09,372 | INFO     | right removable region: 191
[2024-05-17 13:22:30] 2024-05-17 11:22:09,373 | INFO     | model: linear, x: [1715933263.0, 1715933324.0, 1715933385.0, 1715933446.0, 1715933507.0, 1715933568.0, 1715933629.0, 1715933690.0, 1715933751.0, 1715933812.0, 1715
[2024-05-17 13:22:30] 2024-05-17 11:22:09,373 | INFO     | sum of square deviations: 2194675568.0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,374 | INFO     | sum of deviations: 34512220557.5
[2024-05-17 13:22:30] 2024-05-17 11:22:09,374 | INFO     | mean x: 1715939088.5
[2024-05-17 13:22:30] 2024-05-17 11:22:09,374 | INFO     | mean y: 2311280.7552083335
[2024-05-17 13:22:30] 2024-05-17 11:22:09,374 | INFO     | -- intersect: -26981571507.676834
[2024-05-17 13:22:30] 2024-05-17 11:22:09,374 | INFO     | intersect: -26981571507.676834
[2024-05-17 13:22:30] 2024-05-17 11:22:09,374 | INFO     | chi2: 2.4977030347548856
[2024-05-17 13:22:30] 2024-05-17 11:22:09,375 | INFO     | current chi2=2.4977030347548856 (change=50.97124988676005 %)
[2024-05-17 13:22:30] 2024-05-17 11:22:09,375 | INFO     | model: linear, x: [1715933568.0, 1715933629.0, 1715933690.0, 1715933751.0, 1715933812.0, 1715933873.0, 1715933934.0, 1715933995.0, 1715934056.0, 1715934117.0, 1715
[2024-05-17 13:22:30] 2024-05-17 11:22:09,375 | INFO     | sum of square deviations: 2027639878.0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,376 | INFO     | sum of deviations: -3600209264.0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,376 | INFO     | mean x: 1715939241.0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,376 | INFO     | mean y: 2346081.935828877
[2024-05-17 13:22:30] 2024-05-17 11:22:09,376 | INFO     | -- intersect: 3049110164.1272173
[2024-05-17 13:22:30] 2024-05-17 11:22:09,376 | INFO     | intersect: 3049110164.1272173
[2024-05-17 13:22:30] 2024-05-17 11:22:09,377 | INFO     | chi2: 0.8944917784512976
[2024-05-17 13:22:30] 2024-05-17 11:22:09,377 | INFO     | current chi2=0.8944917784512976 (change=64.1874247656876 %)
[2024-05-17 13:22:30] 2024-05-17 11:22:09,377 | INFO     | model: linear, x: [1715933873.0, 1715933934.0, 1715933995.0, 1715934056.0, 1715934117.0, 1715934178.0, 1715934239.0, 1715934300.0, 1715934361.0, 1715934422.0, 1715
[2024-05-17 13:22:30] 2024-05-17 11:22:09,377 | INFO     | sum of square deviations: 1869302025.5
[2024-05-17 13:22:30] 2024-05-17 11:22:09,378 | INFO     | sum of deviations: -9143590943.500002
[2024-05-17 13:22:30] 2024-05-17 11:22:09,378 | INFO     | mean x: 1715939393.5
[2024-05-17 13:22:30] 2024-05-17 11:22:09,378 | INFO     | mean y: 2351359.763736264
[2024-05-17 13:22:30] 2024-05-17 11:22:09,378 | INFO     | -- intersect: 8395777186.071699
[2024-05-17 13:22:30] 2024-05-17 11:22:09,379 | INFO     | intersect: 8395777186.071699
[2024-05-17 13:22:30] 2024-05-17 11:22:09,379 | INFO     | chi2: 0.8371149315965255
[2024-05-17 13:22:30] 2024-05-17 11:22:09,379 | INFO     | current chi2=0.8371149315965255 (change=6.414463300502662 %)
[2024-05-17 13:22:30] 2024-05-17 11:22:09,379 | INFO     | left removable region: 30
[2024-05-17 13:22:30] 2024-05-17 11:22:09,379 | INFO     | model: linear, x: [1715934788.0, 1715934849.0, 1715934910.0, 1715934971.0, 1715935032.0, 1715935093.0, 1715935154.0, 1715935215.0, 1715935276.0, 1715935337.0, 1715
[2024-05-17 13:22:30] 2024-05-17 11:22:09,380 | INFO     | sum of square deviations: 1294014960.0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,380 | INFO     | sum of deviations: 1135288080.0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,381 | INFO     | mean x: 1715939668.0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,381 | INFO     | mean y: 2364480.099378882
[2024-05-17 13:22:30] 2024-05-17 11:22:09,381 | INFO     | -- intersect: -1503094043.4091573
[2024-05-17 13:22:30] 2024-05-17 11:22:09,381 | INFO     | intersect: -1503094043.4091573
[2024-05-17 13:22:30] 2024-05-17 11:22:09,381 | INFO     | chi2: 0.000781096979978499
[2024-05-17 13:22:30] 2024-05-17 11:22:09,381 | INFO     | -- intersect: -1503094043.4091573
[2024-05-17 13:22:30] 2024-05-17 11:22:09,381 | INFO     | current memory leak: 0.88 B/s (using 161 data points, chi2=0.00)
[2024-05-17 13:22:30] 2024-05-17 11:22:09,382 | INFO     | ..............................
[2024-05-17 13:22:30] 2024-05-17 11:22:09,382 | INFO     | . Timing measurements:
[2024-05-17 13:22:30] 2024-05-17 11:22:09,382 | INFO     | . get job = 0 s
[2024-05-17 13:22:30] 2024-05-17 11:22:09,382 | INFO     | . initial setup = 1 s
[2024-05-17 13:22:30] 2024-05-17 11:22:09,382 | INFO     | . payload setup = 5 s
[2024-05-17 13:22:30] 2024-05-17 11:22:09,382 | INFO     | . stage-in = 0 s
[2024-05-17 13:22:30] 2024-05-17 11:22:09,382 | INFO     | . payload execution = 11964 s
[2024-05-17 13:22:30] 2024-05-17 11:22:09,382 | INFO     | . stage-out = 0 s
[2024-05-17 13:22:30] 2024-05-17 11:22:09,382 | INFO     | . log creation = 0 s
[2024-05-17 13:22:30] 2024-05-17 11:22:09,382 | INFO     | ..............................
[2024-05-17 13:22:30] 2024-05-17 11:22:09,480 | INFO     | 
[2024-05-17 13:22:30] 2024-05-17 11:22:09,480 | INFO     | job summary report
[2024-05-17 13:22:30] 2024-05-17 11:22:09,480 | INFO     | --------------------------------------------------
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | PanDA job id: 6201765992
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | task id: 38744216
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | errors: (none)
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | pilot state: finished 
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | transexitcode: 0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | exeerrorcode: 0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | exeerrordiag: 
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | exitcode: 0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | exitmsg: OK
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | cpuconsumptiontime: 45156 s
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | nevents: 400
[2024-05-17 13:22:30] 2024-05-17 11:22:09,481 | INFO     | neventsw: 0
[2024-05-17 13:22:30] 2024-05-17 11:22:09,482 | INFO     | pid: 1865041
[2024-05-17 13:22:30] 2024-05-17 11:22:09,482 | INFO     | pgrp: 1865041
[2024-05-17 13:22:30] 2024-05-17 11:22:09,482 | INFO     | corecount: 4
[2024-05-17 13:22:30] 2024-05-17 11:22:09,482 | INFO     | event service: False
[2024-05-17 13:22:30] 2024-05-17 11:22:09,482 | INFO     | sizes: {0: 2391902, 1: 2392101, 5: 2392307, 11: 2392363, 11973: 2421958, 11975: 2430940, 11977: 2431124, 11981: 2431294}
[2024-05-17 13:22:30] 2024-05-17 11:22:09,482 | INFO     | --------------------------------------------------
[2024-05-17 13:22:30] 2024-05-17 11:22:09,482 | INFO     | 
[2024-05-17 13:22:30] 2024-05-17 11:22:09,482 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/1
[2024-05-17 13:22:30] 2024-05-17 11:22:09,506 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,506 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,508 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,508 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,508 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,508 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-17 13:22:30] 2024-05-17 11:22:09,508 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,508 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-17 13:22:30] 2024-05-17 11:22:09,508 | INFO     | job 6201765992 has completed (purged errors)
[2024-05-17 13:22:30] 2024-05-17 11:22:09,508 | INFO     | overall cleanup function is called
[2024-05-17 13:22:30] 2024-05-17 11:22:10,515 | INFO     | --- collectZombieJob: --- 10, [1865041]
[2024-05-17 13:22:30] 2024-05-17 11:22:10,515 | INFO     | zombie collector waiting for pid 1865041
[2024-05-17 13:22:30] 2024-05-17 11:22:10,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-17 13:22:30] 2024-05-17 11:22:11,520 | INFO     | collected zombie processes
[2024-05-17 13:22:30] 2024-05-17 11:22:11,520 | INFO     | will now attempt to kill all subprocesses of pid=1865041
[2024-05-17 13:22:30] 2024-05-17 11:22:11,732 | INFO     | process IDs to be killed: [1865041] (in reverse order)
[2024-05-17 13:22:30] 2024-05-17 11:22:11,927 | WARNING  | found no corresponding commands to process id(s)
[2024-05-17 13:22:30] 2024-05-17 11:22:11,928 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-17 13:22:30] 2024-05-17 11:22:11,943 | INFO     | did not find any defunct processes belonging to 1865041
[2024-05-17 13:22:30] 2024-05-17 11:22:11,955 | INFO     | did not find any defunct processes belonging to 1865041
[2024-05-17 13:22:30] 2024-05-17 11:22:11,955 | INFO     | ready for new job
[2024-05-17 13:22:30] 2024-05-17 11:22:11,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-17 13:22:30] 2024-05-17 11:22:11,957 | INFO     | *************************************
[2024-05-17 13:22:30] 2024-05-17 11:22:11,957 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-17 13:22:30] 2024-05-17 11:22:11,957 | INFO     | *************************************
[2024-05-17 13:22:30] 2024-05-17 11:22:11,957 | INFO     | 
[2024-05-17 13:22:30] 2024-05-17 11:22:11,962 | INFO     | architecture information:
[2024-05-17 13:22:30] 2024-05-17 11:22:11,962 | INFO     | executing command: cat /etc/os-release
[2024-05-17 13:22:30] 2024-05-17 11:22:11,978 | INFO     | cat /etc/os-release:
[2024-05-17 13:22:30] NAME="CentOS Linux"
[2024-05-17 13:22:30] VERSION="7 (Core)"
[2024-05-17 13:22:30] ID="centos"
[2024-05-17 13:22:30] ID_LIKE="rhel fedora"
[2024-05-17 13:22:30] VERSION_ID="7"
[2024-05-17 13:22:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-17 13:22:30] ANSI_COLOR="0;31"
[2024-05-17 13:22:30] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-17 13:22:30] HOME_URL="https://www.centos.org/"
[2024-05-17 13:22:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-17 13:22:30] 
[2024-05-17 13:22:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-17 13:22:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-17 13:22:30] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-17 13:22:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-17 13:22:30] 
[2024-05-17 13:22:30] 2024-05-17 11:22:11,978 | INFO     | *************************************
[2024-05-17 13:22:30] 2024-05-17 11:22:12,481 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/1
[2024-05-17 13:22:30] 2024-05-17 11:22:12,501 | INFO     | sufficient remaining disk space (3100973727744 B)
[2024-05-17 13:22:30] 2024-05-17 11:22:12,502 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-17 13:22:30] 2024-05-17 11:22:12,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-17 13:22:30] 2024-05-17 11:22:12,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-17 13:22:30] 2024-05-17 11:22:12,502 | INFO     | aborting loop
[2024-05-17 13:22:30] 2024-05-17 11:22:12,715 | INFO     | all data control threads have been joined
[2024-05-17 13:22:30] 2024-05-17 11:22:12,903 | INFO     | all job control threads have been joined
[2024-05-17 13:22:30] 2024-05-17 11:22:13,038 | INFO     | found 0 job(s) in 20 queues
[2024-05-17 13:22:30] 2024-05-17 11:22:13,039 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-17 13:22:30] 2024-05-17 11:22:13,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-17 13:22:30] 2024-05-17 11:22:13,096 | INFO     | all payload control threads have been joined
[2024-05-17 13:22:30] 2024-05-17 11:22:13,294 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-17 13:22:30] 2024-05-17 11:22:13,506 | INFO     | [job] retrieve thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:13,507 | INFO     | [job] job monitor thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:13,721 | INFO     | [payload] validate_post thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:13,721 | INFO     | [data] control thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:13,908 | INFO     | [job] control thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:14,101 | INFO     | [payload] control thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:14,110 | INFO     | [data] copytool_in thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:14,174 | INFO     | [job] validate thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:14,361 | INFO     | [job] create_data_payload thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:14,415 | INFO     | [payload] failed_post thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:14,426 | INFO     | [payload] execute_payloads thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:14,426 | INFO     | [payload] validate_pre thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:14,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-17 13:22:30] 2024-05-17 11:22:15,301 | INFO     | [data] copytool_out thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:15,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-17 13:22:30] 2024-05-17 11:22:15,497 | INFO     | [job] queue monitor thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:19,403 | INFO     | [data] queue_monitor thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:23,269 | INFO     | job.realtimelogging is not enabled
[2024-05-17 13:22:30] 2024-05-17 11:22:24,274 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-17 13:22:30] 2024-05-17 11:22:24,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47409862997056)>', '<ExcThread(monitor, started 47410036348672)>']
[2024-05-17 13:22:30] 2024-05-17 11:22:25,094 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-17 13:22:30] 2024-05-17 11:22:25,094 | INFO     | [monitor] control thread has ended
[2024-05-17 13:22:30] 2024-05-17 11:22:29,324 | INFO     | all workflow threads have been joined
[2024-05-17 13:22:30] 2024-05-17 11:22:29,324 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-17 13:22:30] 2024-05-17 11:22:29,325 | INFO     | traces error code: 0
[2024-05-17 13:22:30] 2024-05-17 11:22:29,325 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-17 13:22:30] 2024-05-17 11:22:29,419 [wrapper] ==== pilot stdout END ====
[2024-05-17 13:22:30] 2024-05-17 11:22:29,421 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-17 13:22:30] 2024-05-17 11:22:29,423 [wrapper] pilotpid: 1837589
[2024-05-17 13:22:30] 2024-05-17 11:22:29,425 [wrapper] Pilot exit status: 0
[2024-05-17 13:22:30] 2024-05-17 11:22:29,433 [wrapper] pandaids: 6201765992
[2024-05-17 13:22:30] 2024-05-17 11:22:29,524 [wrapper] cleanup: SIGTERM to supervisor_pilot 3030065 1837590
[2024-05-17 13:22:30] 2024-05-17 11:22:29,527 [wrapper] Test setup, not cleaning
[2024-05-17 13:22:30] 2024-05-17 11:22:29,531 [wrapper] ==== wrapper stdout END ====
[2024-05-17 13:22:30] 2024-05-17 11:22:29,534 [wrapper] ==== wrapper stderr END ====
[2024-05-17 13:22:30] 2024-05-17 11:22:29,540 [wrapper] apfmon messages muted
[2024-05-17 13:22:30]  *** Error codes and diagnostics ***
[2024-05-17 13:22:30]     "exeErrorCode": 0,
[2024-05-17 13:22:30]     "exeErrorDiag": "",
[2024-05-17 13:22:30]     "pilotErrorCode": 0,
[2024-05-17 13:22:30]     "pilotErrorDiag": "",
[2024-05-17 13:22:30]  *** Listing of results directory ***
[2024-05-17 13:22:30] total 909232
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc    467845 May 10 19:36 pilot3.tar.gz
[2024-05-17 13:22:30] -rwx------ 1 boinc boinc     32251 May 10 19:44 runpilot2-wrapper.sh
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc      5633 May 10 19:44 queuedata.json
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc       100 May 17 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-17 13:22:30] -rwxr-xr-x 1 boinc boinc      7986 May 17 10:00 run_atlas
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc       105 May 17 10:00 job.xml
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc      6644 May 17 10:02 init_data.xml
[2024-05-17 13:22:30] -rw-r--r-- 2 boinc boinc 651893593 May 17 10:02 EVNT.38744214._000052.pool.root.1
[2024-05-17 13:22:30] -rw-r--r-- 2 boinc boinc     17537 May 17 10:02 start_atlas.sh
[2024-05-17 13:22:30] drwxrwx--x 2 boinc boinc      4096 May 17 10:02 shared
[2024-05-17 13:22:30] -rw-r--r-- 2 boinc boinc    479981 May 17 10:02 input.tar.gz
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc         0 May 17 10:02 boinc_lockfile
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc      2536 May 17 10:02 pandaJob.out
[2024-05-17 13:22:30] -rw------- 1 boinc boinc       424 May 17 10:02 setup.sh.local
[2024-05-17 13:22:30] -rw------- 1 boinc boinc   1019364 May 17 10:02 agis_schedconf.cvmfs.json
[2024-05-17 13:22:30] -rw------- 1 boinc boinc   1324701 May 17 10:02 cric_ddmendpoints.json
[2024-05-17 13:22:30] drwx------ 4 boinc boinc      4096 May 17 10:02 pilot3
[2024-05-17 13:22:30] -rw------- 1 boinc boinc 272452545 May 17 13:21 HITS.38744216._001556.pool.root.1
[2024-05-17 13:22:30] -rw------- 1 boinc boinc        95 May 17 13:21 pilot_heartbeat.json
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc       531 May 17 13:21 boinc_task_state.xml
[2024-05-17 13:22:30] -rw------- 1 boinc boinc      1052 May 17 13:21 memory_monitor_summary.json
[2024-05-17 13:22:30] -rw------- 1 boinc boinc         0 May 17 13:22 agis_ddmendpoints.agis.ALL.json
[2024-05-17 13:22:30] -rw------- 1 boinc boinc    326236 May 17 13:22 log.38744216._001556.job.log.tgz.1
[2024-05-17 13:22:30] -rw------- 1 boinc boinc      7714 May 17 13:22 heartbeat.json
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc      8192 May 17 13:22 boinc_mmap_file
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc        28 May 17 13:22 wrapper_checkpoint.txt
[2024-05-17 13:22:30] -rw------- 1 boinc boinc      4294 May 17 13:22 pilotlog.txt
[2024-05-17 13:22:30] -rw------- 1 boinc boinc   1259573 May 17 13:22 log.38744216._001556.job.log.1
[2024-05-17 13:22:30] -rw------- 1 boinc boinc       357 May 17 13:22 output.list
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc       620 May 17 13:22 runtime_log
[2024-05-17 13:22:30] -rw------- 1 boinc boinc   1607680 May 17 13:22 result.tar.gz
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc     11410 May 17 13:22 runtime_log.err
[2024-05-17 13:22:30] -rw------- 1 boinc boinc       657 May 17 13:22 JERLDmRTjP5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmDxFKDm6E6kHm.diag
[2024-05-17 13:22:30] -rw-r--r-- 1 boinc boinc     21281 May 17 13:22 stderr.txt
[2024-05-17 13:22:30] HITS file was successfully produced:
[2024-05-17 13:22:30] -rw------- 1 boinc boinc 272452545 May 17 13:21 shared/HITS.pool.root.1
[2024-05-17 13:22:30]  *** Contents of shared directory: ***
[2024-05-17 13:22:30] total 904756
[2024-05-17 13:22:30] -rw-r--r-- 2 boinc boinc 651893593 May 17 10:02 ATLAS.root_0
[2024-05-17 13:22:30] -rw-r--r-- 2 boinc boinc     17537 May 17 10:02 start_atlas.sh
[2024-05-17 13:22:30] -rw-r--r-- 2 boinc boinc    479981 May 17 10:02 input.tar.gz
[2024-05-17 13:22:30] -rw------- 1 boinc boinc 272452545 May 17 13:21 HITS.pool.root.1
[2024-05-17 13:22:30] -rw------- 1 boinc boinc   1607680 May 17 13:22 result.tar.gz
13:22:31 (1826765): run_atlas exited; CPU time 44892.126377
13:22:31 (1826765): called boinc_finish(0)

</stderr_txt>
]]>

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