Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:00:28 (3770067): wrapper (7.7.26015): starting
02:00:28 (3770067): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 02:00:28] Arguments: --nthreads 4
[2024-05-16 02:00:28] Threads: 4
[2024-05-16 02:00:28] Checking for CVMFS
[2024-05-16 02:00:28] No cvmfs_config command found, will try listing directly
[2024-05-16 02:00:28] CVMFS is ok
[2024-05-16 02:00:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 02:00:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 02:00:28] Further information can be found at the LHC@home message board.
[2024-05-16 02:00:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 02:00:28] Checking for apptainer binary...
[2024-05-16 02:00:28] which: no apptainer in ((null))
[2024-05-16 02:00:28] apptainer is not installed, using version from CVMFS
[2024-05-16 02:00:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 02:00:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-16 02:00:29] apptainer works
[2024-05-16 02:00:29] Set ATHENA_PROC_NUMBER=4
[2024-05-16 02:00:29] Set ATHENA_CORE_NUMBER=4
[2024-05-16 02:00:29] Starting ATLAS job with PandaID=6201764307
[2024-05-16 02:00:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 04:47:27]  *** The last 200 lines of the pilot log: ***
[2024-05-16 04:47:27] 2024-05-16 02:47:13,667 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-16 04:47:27] 2024-05-16 02:47:13,670 | INFO     | fitting pss+swap vs Time
[2024-05-16 04:47:27] 2024-05-16 02:47:13,670 | INFO     | model: linear, x: [1715817671.0, 1715817732.0, 1715817793.0, 1715817854.0, 1715817915.0, 1715817976.0, 1715818037.0, 1715818098.0, 1715818159.0, 1715818220.0, 1715
[2024-05-16 04:47:27] 2024-05-16 02:47:13,670 | INFO     | sum of square deviations: 1367709365.0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,671 | INFO     | sum of deviations: 63737945685.49996
[2024-05-16 04:47:27] 2024-05-16 02:47:13,671 | INFO     | mean x: 1715822642.5
[2024-05-16 04:47:27] 2024-05-16 02:47:13,671 | INFO     | mean y: 2213190.0304878047
[2024-05-16 04:47:27] 2024-05-16 02:47:13,671 | INFO     | -- intersect: -79958495709.27286
[2024-05-16 04:47:27] 2024-05-16 02:47:13,671 | INFO     | intersect: -79958495709.27286
[2024-05-16 04:47:27] 2024-05-16 02:47:13,671 | INFO     | chi2: 4.964417780817145
[2024-05-16 04:47:27] 2024-05-16 02:47:13,672 | INFO     | model: linear, x: [1715817671.0, 1715817732.0, 1715817793.0, 1715817854.0, 1715817915.0, 1715817976.0, 1715818037.0, 1715818098.0, 1715818159.0, 1715818220.0, 1715
[2024-05-16 04:47:27] 2024-05-16 02:47:13,672 | INFO     | sum of square deviations: 1246386160.0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,672 | INFO     | sum of deviations: 71772292804.00002
[2024-05-16 04:47:27] 2024-05-16 02:47:13,673 | INFO     | mean x: 1715822490.0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,673 | INFO     | mean y: 2222967.65408805
[2024-05-16 04:47:27] 2024-05-16 02:47:13,673 | INFO     | -- intersect: -98802239167.87572
[2024-05-16 04:47:27] 2024-05-16 02:47:13,673 | INFO     | intersect: -98802239167.87572
[2024-05-16 04:47:27] 2024-05-16 02:47:13,673 | INFO     | chi2: 4.161161000336646
[2024-05-16 04:47:27] 2024-05-16 02:47:13,673 | INFO     | current chi2=4.161161000336646 (change=16.180281675412957 %)
[2024-05-16 04:47:27] 2024-05-16 02:47:13,673 | INFO     | right removable region: 158
[2024-05-16 04:47:27] 2024-05-16 02:47:13,673 | INFO     | model: linear, x: [1715817976.0, 1715818037.0, 1715818098.0, 1715818159.0, 1715818220.0, 1715818281.0, 1715818342.0, 1715818403.0, 1715818464.0, 1715818525.0, 1715
[2024-05-16 04:47:27] 2024-05-16 02:47:13,673 | INFO     | sum of square deviations: 1246386160.0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,674 | INFO     | sum of deviations: 26519084368.0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,674 | INFO     | mean x: 1715822795.0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,674 | INFO     | mean y: 2259819.3333333335
[2024-05-16 04:47:27] 2024-05-16 02:47:13,674 | INFO     | -- intersect: -36504924648.3942
[2024-05-16 04:47:27] 2024-05-16 02:47:13,674 | INFO     | intersect: -36504924648.3942
[2024-05-16 04:47:27] 2024-05-16 02:47:13,675 | INFO     | chi2: 2.4186866018977256
[2024-05-16 04:47:27] 2024-05-16 02:47:13,675 | INFO     | current chi2=2.4186866018977256 (change=51.27955162751011 %)
[2024-05-16 04:47:27] 2024-05-16 02:47:13,675 | INFO     | model: linear, x: [1715818281.0, 1715818342.0, 1715818403.0, 1715818464.0, 1715818525.0, 1715818586.0, 1715818647.0, 1715818708.0, 1715818769.0, 1715818830.0, 1715
[2024-05-16 04:47:27] 2024-05-16 02:47:13,675 | INFO     | sum of square deviations: 1132458442.5
[2024-05-16 04:47:27] 2024-05-16 02:47:13,676 | INFO     | sum of deviations: -3621083219.999998
[2024-05-16 04:47:27] 2024-05-16 02:47:13,676 | INFO     | mean x: 1715822947.5
[2024-05-16 04:47:27] 2024-05-16 02:47:13,676 | INFO     | mean y: 2300174.1818181816
[2024-05-16 04:47:27] 2024-05-16 02:47:13,676 | INFO     | -- intersect: 5488715790.4292
[2024-05-16 04:47:27] 2024-05-16 02:47:13,676 | INFO     | intersect: 5488715790.4292
[2024-05-16 04:47:27] 2024-05-16 02:47:13,676 | INFO     | chi2: 0.8904348760437839
[2024-05-16 04:47:27] 2024-05-16 02:47:13,676 | INFO     | current chi2=0.8904348760437839 (change=63.1851900388773 %)
[2024-05-16 04:47:27] 2024-05-16 02:47:13,677 | INFO     | model: linear, x: [1715818586.0, 1715818647.0, 1715818708.0, 1715818769.0, 1715818830.0, 1715818891.0, 1715818952.0, 1715819013.0, 1715819074.0, 1715819135.0, 1715
[2024-05-16 04:47:27] 2024-05-16 02:47:13,677 | INFO     | sum of square deviations: 1025693650.0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,677 | INFO     | sum of deviations: -6595873086.999999
[2024-05-16 04:47:27] 2024-05-16 02:47:13,677 | INFO     | mean x: 1715823100.0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,678 | INFO     | mean y: 2304328.637583893
[2024-05-16 04:47:27] 2024-05-16 02:47:13,678 | INFO     | -- intersect: 11036155817.669333
[2024-05-16 04:47:27] 2024-05-16 02:47:13,678 | INFO     | intersect: 11036155817.669333
[2024-05-16 04:47:27] 2024-05-16 02:47:13,678 | INFO     | chi2: 0.8466371052243706
[2024-05-16 04:47:27] 2024-05-16 02:47:13,678 | INFO     | current chi2=0.8466371052243706 (change=4.91869444894246 %)
[2024-05-16 04:47:27] 2024-05-16 02:47:13,678 | INFO     | left removable region: 30
[2024-05-16 04:47:27] 2024-05-16 02:47:13,678 | INFO     | model: linear, x: [1715819501.0, 1715819562.0, 1715819623.0, 1715819684.0, 1715819745.0, 1715819806.0, 1715819867.0, 1715819928.0, 1715819989.0, 1715820050.0, 1715
[2024-05-16 04:47:27] 2024-05-16 02:47:13,678 | INFO     | sum of square deviations: 650252192.0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,679 | INFO     | sum of deviations: 1388566851.0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,679 | INFO     | mean x: 1715823374.5
[2024-05-16 04:47:27] 2024-05-16 02:47:13,679 | INFO     | mean y: 2320661.671875
[2024-05-16 04:47:27] 2024-05-16 02:47:13,679 | INFO     | -- intersect: -3661696913.8377495
[2024-05-16 04:47:27] 2024-05-16 02:47:13,679 | INFO     | intersect: -3661696913.8377495
[2024-05-16 04:47:27] 2024-05-16 02:47:13,679 | INFO     | chi2: 0.00016509982887296943
[2024-05-16 04:47:27] 2024-05-16 02:47:13,680 | INFO     | -- intersect: -3661696913.8377495
[2024-05-16 04:47:27] 2024-05-16 02:47:13,680 | INFO     | current memory leak: 2.14 B/s (using 128 data points, chi2=0.00)
[2024-05-16 04:47:27] 2024-05-16 02:47:13,680 | INFO     | ..............................
[2024-05-16 04:47:27] 2024-05-16 02:47:13,680 | INFO     | . Timing measurements:
[2024-05-16 04:47:27] 2024-05-16 02:47:13,680 | INFO     | . get job = 0 s
[2024-05-16 04:47:27] 2024-05-16 02:47:13,680 | INFO     | . initial setup = 1 s
[2024-05-16 04:47:27] 2024-05-16 02:47:13,680 | INFO     | . payload setup = 6 s
[2024-05-16 04:47:27] 2024-05-16 02:47:13,680 | INFO     | . stage-in = 0 s
[2024-05-16 04:47:27] 2024-05-16 02:47:13,680 | INFO     | . payload execution = 9956 s
[2024-05-16 04:47:27] 2024-05-16 02:47:13,680 | INFO     | . stage-out = 0 s
[2024-05-16 04:47:27] 2024-05-16 02:47:13,681 | INFO     | . log creation = 0 s
[2024-05-16 04:47:27] 2024-05-16 02:47:13,681 | INFO     | ..............................
[2024-05-16 04:47:27] 2024-05-16 02:47:13,773 | INFO     | 
[2024-05-16 04:47:27] 2024-05-16 02:47:13,773 | INFO     | job summary report
[2024-05-16 04:47:27] 2024-05-16 02:47:13,773 | INFO     | --------------------------------------------------
[2024-05-16 04:47:27] 2024-05-16 02:47:13,773 | INFO     | PanDA job id: 6201764307
[2024-05-16 04:47:27] 2024-05-16 02:47:13,773 | INFO     | task id: 38204311
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | errors: (none)
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | pilot state: finished 
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | transexitcode: 0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | exeerrorcode: 0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | exeerrordiag: 
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | exitcode: 0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | exitmsg: OK
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | cpuconsumptiontime: 37112 s
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | nevents: 400
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | neventsw: 0
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | pid: 3784859
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | pgrp: 3784859
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | corecount: 4
[2024-05-16 04:47:27] 2024-05-16 02:47:13,774 | INFO     | event service: False
[2024-05-16 04:47:27] 2024-05-16 02:47:13,775 | INFO     | sizes: {0: 2392230, 6: 2392436, 11: 2392464, 9966: 2421053, 9967: 2430091, 9975: 2430205}
[2024-05-16 04:47:27] 2024-05-16 02:47:13,775 | INFO     | --------------------------------------------------
[2024-05-16 04:47:27] 2024-05-16 02:47:13,775 | INFO     | 
[2024-05-16 04:47:27] 2024-05-16 02:47:13,775 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/1
[2024-05-16 04:47:27] 2024-05-16 02:47:13,796 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,796 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,796 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,796 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | job 6201764307 has completed (purged errors)
[2024-05-16 04:47:27] 2024-05-16 02:47:13,797 | INFO     | overall cleanup function is called
[2024-05-16 04:47:27] 2024-05-16 02:47:14,805 | INFO     | --- collectZombieJob: --- 10, [3784859]
[2024-05-16 04:47:27] 2024-05-16 02:47:14,805 | INFO     | zombie collector waiting for pid 3784859
[2024-05-16 04:47:27] 2024-05-16 02:47:14,805 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 04:47:27] 2024-05-16 02:47:15,566 | INFO     | 9994s have passed since pilot start
[2024-05-16 04:47:27] 2024-05-16 02:47:15,811 | INFO     | collected zombie processes
[2024-05-16 04:47:27] 2024-05-16 02:47:15,811 | INFO     | will now attempt to kill all subprocesses of pid=3784859
[2024-05-16 04:47:27] 2024-05-16 02:47:16,008 | INFO     | process IDs to be killed: [3784859] (in reverse order)
[2024-05-16 04:47:27] 2024-05-16 02:47:16,212 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 04:47:27] 2024-05-16 02:47:16,212 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 04:47:27] 2024-05-16 02:47:16,232 | INFO     | did not find any defunct processes belonging to 3784859
[2024-05-16 04:47:27] 2024-05-16 02:47:16,242 | INFO     | did not find any defunct processes belonging to 3784859
[2024-05-16 04:47:27] 2024-05-16 02:47:16,242 | INFO     | ready for new job
[2024-05-16 04:47:27] 2024-05-16 02:47:16,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 04:47:27] 2024-05-16 02:47:16,243 | INFO     | *************************************
[2024-05-16 04:47:27] 2024-05-16 02:47:16,243 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 04:47:27] 2024-05-16 02:47:16,243 | INFO     | *************************************
[2024-05-16 04:47:27] 2024-05-16 02:47:16,244 | INFO     | 
[2024-05-16 04:47:27] 2024-05-16 02:47:16,248 | INFO     | architecture information:
[2024-05-16 04:47:27] 2024-05-16 02:47:16,248 | INFO     | executing command: cat /etc/os-release
[2024-05-16 04:47:27] 2024-05-16 02:47:16,264 | INFO     | cat /etc/os-release:
[2024-05-16 04:47:27] NAME="CentOS Linux"
[2024-05-16 04:47:27] VERSION="7 (Core)"
[2024-05-16 04:47:27] ID="centos"
[2024-05-16 04:47:27] ID_LIKE="rhel fedora"
[2024-05-16 04:47:27] VERSION_ID="7"
[2024-05-16 04:47:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 04:47:27] ANSI_COLOR="0;31"
[2024-05-16 04:47:27] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 04:47:27] HOME_URL="https://www.centos.org/"
[2024-05-16 04:47:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 04:47:27] 
[2024-05-16 04:47:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 04:47:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 04:47:27] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 04:47:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 04:47:27] 
[2024-05-16 04:47:27] 2024-05-16 02:47:16,264 | INFO     | *************************************
[2024-05-16 04:47:27] 2024-05-16 02:47:16,767 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/1
[2024-05-16 04:47:27] 2024-05-16 02:47:16,790 | INFO     | sufficient remaining disk space (3016625225728 B)
[2024-05-16 04:47:27] 2024-05-16 02:47:16,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 04:47:27] 2024-05-16 02:47:16,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 04:47:27] 2024-05-16 02:47:16,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 04:47:27] 2024-05-16 02:47:16,791 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 04:47:27] 2024-05-16 02:47:16,791 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-16 04:47:27] 2024-05-16 02:47:16,792 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 04:47:27] 2024-05-16 02:47:16,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 04:47:27] 2024-05-16 02:47:16,792 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 04:47:27] 2024-05-16 02:47:16,840 | INFO     | all data control threads have been joined
[2024-05-16 04:47:27] 2024-05-16 02:47:17,172 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 04:47:27] 2024-05-16 02:47:17,172 | INFO     | aborting loop
[2024-05-16 04:47:27] 2024-05-16 02:47:17,225 | INFO     | all job control threads have been joined
[2024-05-16 04:47:27] 2024-05-16 02:47:17,502 | INFO     | all payload control threads have been joined
[2024-05-16 04:47:27] 2024-05-16 02:47:17,795 | INFO     | [job] retrieve thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:17,845 | INFO     | [data] control thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,088 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,167 | INFO     | [job] validate thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,178 | INFO     | [job] job monitor thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,230 | INFO     | [job] control thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,356 | INFO     | [payload] failed_post thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,390 | INFO     | [data] copytool_in thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,486 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,507 | INFO     | [payload] control thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 04:47:27] 2024-05-16 02:47:18,782 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,796 | INFO     | [data] copytool_out thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,842 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:18,975 | INFO     | [payload] validate_post thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:19,785 | INFO     | [job] queue monitor thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:20,797 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 04:47:27] 2024-05-16 02:47:21,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47970081281088)>', '<ExcThread(monitor, started 47970260936448)>']
[2024-05-16 04:47:27] 2024-05-16 02:47:21,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 04:47:27] 2024-05-16 02:47:21,814 | INFO     | [monitor] control thread has ended
[2024-05-16 04:47:27] 2024-05-16 02:47:26,596 | INFO     | all workflow threads have been joined
[2024-05-16 04:47:27] 2024-05-16 02:47:26,597 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 04:47:27] 2024-05-16 02:47:26,597 | INFO     | traces error code: 0
[2024-05-16 04:47:27] 2024-05-16 02:47:26,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 04:47:27] 2024-05-16 02:47:26,736 [wrapper] ==== pilot stdout END ====
[2024-05-16 04:47:27] 2024-05-16 02:47:26,739 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 04:47:27] 2024-05-16 02:47:26,741 [wrapper] pilotpid: 3777131
[2024-05-16 04:47:27] 2024-05-16 02:47:26,743 [wrapper] Pilot exit status: 0
[2024-05-16 04:47:27] 2024-05-16 02:47:26,759 [wrapper] pandaids: 6201764307
[2024-05-16 04:47:27] 2024-05-16 02:47:26,871 [wrapper] cleanup: SIGTERM to supervisor_pilot  638427 3777132
[2024-05-16 04:47:27] 2024-05-16 02:47:26,875 [wrapper] Test setup, not cleaning
[2024-05-16 04:47:27] 2024-05-16 02:47:26,877 [wrapper] ==== wrapper stdout END ====
[2024-05-16 04:47:27] 2024-05-16 02:47:26,879 [wrapper] ==== wrapper stderr END ====
[2024-05-16 04:47:27] 2024-05-16 02:47:26,885 [wrapper] apfmon messages muted
[2024-05-16 04:47:27]  *** Error codes and diagnostics ***
[2024-05-16 04:47:27]     "exeErrorCode": 0,
[2024-05-16 04:47:27]     "exeErrorDiag": "",
[2024-05-16 04:47:27]     "pilotErrorCode": 0,
[2024-05-16 04:47:27]     "pilotErrorDiag": "",
[2024-05-16 04:47:27]  *** Listing of results directory ***
[2024-05-16 04:47:27] total 618332
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc    467845 May 10 19:36 pilot3.tar.gz
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc      5633 May 10 19:40 queuedata.json
[2024-05-16 04:47:27] -rwx------ 1 boinc boinc     32251 May 10 19:41 runpilot2-wrapper.sh
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc       100 May 16 02:00 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 04:47:27] -rwxr-xr-x 1 boinc boinc      7986 May 16 02:00 run_atlas
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc       105 May 16 02:00 job.xml
[2024-05-16 04:47:27] -rw-r--r-- 2 boinc boinc 452340278 May 16 02:00 EVNT.38204309._000627.pool.root.1
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc      6644 May 16 02:00 init_data.xml
[2024-05-16 04:47:27] -rw-r--r-- 2 boinc boinc     17537 May 16 02:00 start_atlas.sh
[2024-05-16 04:47:27] drwxrwx--x 2 boinc boinc      4096 May 16 02:00 shared
[2024-05-16 04:47:27] -rw-r--r-- 2 boinc boinc    480006 May 16 02:00 input.tar.gz
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc         0 May 16 02:00 boinc_lockfile
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc      2610 May 16 02:00 pandaJob.out
[2024-05-16 04:47:27] -rw------- 1 boinc boinc       424 May 16 02:00 setup.sh.local
[2024-05-16 04:47:27] -rw------- 1 boinc boinc   1011347 May 16 02:00 agis_schedconf.cvmfs.json
[2024-05-16 04:47:27] -rw------- 1 boinc boinc         0 May 16 02:00 agis_ddmendpoints.agis.ALL.json
[2024-05-16 04:47:27] -rw------- 1 boinc boinc   1324701 May 16 02:00 cric_ddmendpoints.json
[2024-05-16 04:47:27] drwx------ 4 boinc boinc      4096 May 16 02:00 pilot3
[2024-05-16 04:47:27] -rw------- 1 boinc boinc 174598040 May 16 04:46 HITS.38204311._019220.pool.root.1
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc       530 May 16 04:46 boinc_task_state.xml
[2024-05-16 04:47:27] -rw------- 1 boinc boinc      1040 May 16 04:47 memory_monitor_summary.json
[2024-05-16 04:47:27] -rw------- 1 boinc boinc    314449 May 16 04:47 log.38204311._019220.job.log.tgz.1
[2024-05-16 04:47:27] -rw------- 1 boinc boinc      7714 May 16 04:47 heartbeat.json
[2024-05-16 04:47:27] -rw------- 1 boinc boinc        95 May 16 04:47 pilot_heartbeat.json
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc        28 May 16 04:47 wrapper_checkpoint.txt
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc      8192 May 16 04:47 boinc_mmap_file
[2024-05-16 04:47:27] -rw------- 1 boinc boinc      4345 May 16 04:47 pilotlog.txt
[2024-05-16 04:47:27] -rw------- 1 boinc boinc   1041431 May 16 04:47 log.38204311._019220.job.log.1
[2024-05-16 04:47:27] -rw------- 1 boinc boinc       357 May 16 04:47 output.list
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc       620 May 16 04:47 runtime_log
[2024-05-16 04:47:27] -rw------- 1 boinc boinc   1372160 May 16 04:47 result.tar.gz
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc     11410 May 16 04:47 runtime_log.err
[2024-05-16 04:47:27] -rw------- 1 boinc boinc       658 May 16 04:47 QlxLDmQQjP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmUrIKDm8UiC8m.diag
[2024-05-16 04:47:27] -rw-r--r-- 1 boinc boinc     21295 May 16 04:47 stderr.txt
[2024-05-16 04:47:27] HITS file was successfully produced:
[2024-05-16 04:47:27] -rw------- 1 boinc boinc 174598040 May 16 04:46 shared/HITS.pool.root.1
[2024-05-16 04:47:27]  *** Contents of shared directory: ***
[2024-05-16 04:47:27] total 614088
[2024-05-16 04:47:27] -rw-r--r-- 2 boinc boinc 452340278 May 16 02:00 ATLAS.root_0
[2024-05-16 04:47:27] -rw-r--r-- 2 boinc boinc     17537 May 16 02:00 start_atlas.sh
[2024-05-16 04:47:27] -rw-r--r-- 2 boinc boinc    480006 May 16 02:00 input.tar.gz
[2024-05-16 04:47:27] -rw------- 1 boinc boinc 174598040 May 16 04:46 HITS.pool.root.1
[2024-05-16 04:47:27] -rw------- 1 boinc boinc   1372160 May 16 04:47 result.tar.gz
04:47:29 (3770067): run_atlas exited; CPU time 36693.835184
04:47:29 (3770067): called boinc_finish(0)

</stderr_txt>
]]>

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