Name | iB0LDmUeEP5n7Olcko1bjSoqABFKDmABFKDmOtvXDmFMWKDmjNBNnn_0 |
Workunit | 222874722 |
Created | 9 May 2024, 8:53:14 UTC |
Sent | 9 May 2024, 8:53:57 UTC |
Report deadline | 17 May 2024, 8:53:57 UTC |
Received | 16 May 2024, 3:19:33 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 10691208 |
Run time | 21 hours 0 min 7 sec |
CPU time | 3 days 8 hours 23 min 46 sec |
Validate state | Valid |
Credit | 6,745.88 |
Device peak FLOPS | 13.31 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.82 GB |
Peak swap size | 35.38 GB |
Peak disk usage | 2.05 GB |
<core_client_version>7.20.2</core_client_version> <![CDATA[ <stderr_txt> 07:52:39 (637602): wrapper (7.7.26015): starting 07:52:39 (637602): wrapper: running run_atlas (--nthreads 4) [2024-05-15 07:52:39] Arguments: --nthreads 4 [2024-05-15 07:52:39] Threads: 4 [2024-05-15 07:52:39] Checking for CVMFS [2024-05-15 07:52:39] No cvmfs_config command found, will try listing directly [2024-05-15 07:52:39] CVMFS is ok [2024-05-15 07:52:39] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-05-15 07:52:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2024-05-15 07:52:39] Further information can be found at the LHC@home message board. [2024-05-15 07:52:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-05-15 07:52:39] Checking for apptainer binary... [2024-05-15 07:52:39] which: no apptainer in ((null)) [2024-05-15 07:52:39] apptainer is not installed, using version from CVMFS [2024-05-15 07:52:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-05-15 07:52:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz [2024-05-15 07:52:41] apptainer works [2024-05-15 07:52:41] Set ATHENA_PROC_NUMBER=4 [2024-05-15 07:52:41] Set ATHENA_CORE_NUMBER=4 [2024-05-15 07:52:41] Starting ATLAS job with PandaID=6199854376 [2024-05-15 07:52:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh 09:00:53 (926478): wrapper (7.7.26015): starting 09:00:53 (926478): wrapper: running run_atlas (--nthreads 4) [2024-05-15 09:00:53] Arguments: --nthreads 4 [2024-05-15 09:00:53] Threads: 4 [2024-05-15 09:00:53] This job has been restarted, cleaning up previous attempt [2024-05-15 09:00:53] Checking for CVMFS [2024-05-15 09:00:53] No cvmfs_config command found, will try listing directly [2024-05-15 09:00:53] CVMFS is ok [2024-05-15 09:00:53] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-05-15 09:00:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2024-05-15 09:00:53] Further information can be found at the LHC@home message board. [2024-05-15 09:00:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-05-15 09:00:53] Checking for apptainer binary... [2024-05-15 09:00:53] which: no apptainer in ((null)) [2024-05-15 09:00:53] apptainer is not installed, using version from CVMFS [2024-05-15 09:00:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-05-15 09:00:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz [2024-05-15 09:00:54] apptainer works [2024-05-15 09:00:54] Set ATHENA_PROC_NUMBER=4 [2024-05-15 09:00:54] Set ATHENA_CORE_NUMBER=4 [2024-05-15 09:00:54] Starting ATLAS job with PandaID=6199854376 [2024-05-15 09:00:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2024-05-16 05:11:52] *** The last 200 lines of the pilot log: *** [2024-05-16 05:11:52] 2024-05-16 03:11:27,607 | INFO | preparing for final server update for job 6199854376 in state='finished' [2024-05-16 05:11:52] 2024-05-16 03:11:27,607 | INFO | this job has now completed (state=finished) [2024-05-16 05:11:52] 2024-05-16 03:11:27,607 | INFO | pilot will not update the server (heartbeat message will be written to file) [2024-05-16 05:11:52] 2024-05-16 03:11:27,607 | INFO | job 6199854376 has finished - writing final server update [2024-05-16 05:11:52] 2024-05-16 03:11:27,607 | WARNING | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_782377/.job.ad' [2024-05-16 05:11:52] 2024-05-16 03:11:27,608 | INFO | total number of processed events: 1950 (read) [2024-05-16 05:11:52] 2024-05-16 03:11:27,611 | INFO | executing command: lscpu [2024-05-16 05:11:52] 2024-05-16 03:11:27,651 | INFO | found 32 cores (16 cores per socket, 2 sockets) [2024-05-16 05:11:52] 2024-05-16 03:11:27,651 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2024-05-16 05:11:52] 2024-05-16 03:11:27,680 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2024-05-16 05:11:52] 2024-05-16 03:11:27,937 | INFO | monitor loop #5543: job 0:6199854376 is in state 'finished' [2024-05-16 05:11:52] 2024-05-16 03:11:27,937 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2024-05-16 05:11:52] 2024-05-16 03:11:30,440 | INFO | monitor loop #5544: job 0:6199854376 is in state 'finished' [2024-05-16 05:11:52] 2024-05-16 03:11:30,440 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2024-05-16 05:11:52] 2024-05-16 03:11:30,922 | INFO | CPU arch script returned: x86-64-v4 [2024-05-16 05:11:52] 2024-05-16 03:11:30,922 | INFO | using path: /scratch/boinc/var/slot60/slots/1/PanDA_Pilot-6199854376/memory_monitor_summary.json (trf name=prmon) [2024-05-16 05:11:52] 2024-05-16 03:11:30,923 | INFO | extracted standard info from prmon json [2024-05-16 05:11:52] 2024-05-16 03:11:30,923 | INFO | extracted standard memory fields from prmon json [2024-05-16 05:11:52] 2024-05-16 03:11:30,923 | WARNING | GPU info not found in prmon json [2024-05-16 05:11:52] 2024-05-16 03:11:30,936 | INFO | fitting pss+swap vs Time [2024-05-16 05:11:52] 2024-05-16 03:11:30,937 | INFO | model: linear, x: [1715756487.0, 1715756548.0, 1715756609.0, 1715756670.0, 1715756731.0, 1715756792.0, 1715756853.0, 1715756914.0, 1715756975.0, 1715757036.0, 1715 [2024-05-16 05:11:52] 2024-05-16 03:11:30,938 | INFO | sum of square deviations: 523857851186.99884 [2024-05-16 05:11:52] 2024-05-16 03:11:30,957 | INFO | sum of deviations: 2439115570038.313 [2024-05-16 05:11:52] 2024-05-16 03:11:30,957 | INFO | mean x: 1715792782.0008397 [2024-05-16 05:11:52] 2024-05-16 03:11:30,957 | INFO | mean y: 2624545.687657431 [2024-05-16 05:11:52] 2024-05-16 03:11:30,957 | INFO | -- intersect: -7986216091.242489 [2024-05-16 05:11:52] 2024-05-16 03:11:30,957 | INFO | intersect: -7986216091.242489 [2024-05-16 05:11:52] 2024-05-16 03:11:30,958 | INFO | chi2: 16.15499003062138 [2024-05-16 05:11:52] 2024-05-16 03:11:30,959 | INFO | model: linear, x: [1715756487.0, 1715756548.0, 1715756609.0, 1715756670.0, 1715756731.0, 1715756792.0, 1715756853.0, 1715756914.0, 1715756975.0, 1715757036.0, 1715 [2024-05-16 05:11:52] 2024-05-16 03:11:30,959 | INFO | sum of square deviations: 517287802724.49945 [2024-05-16 05:11:52] 2024-05-16 03:11:30,977 | INFO | sum of deviations: 2810266045581.0596 [2024-05-16 05:11:52] 2024-05-16 03:11:30,978 | INFO | mean x: 1715792629.5008433 [2024-05-16 05:11:52] 2024-05-16 03:11:30,978 | INFO | mean y: 2633159.4409780777 [2024-05-16 05:11:52] 2024-05-16 03:11:30,978 | INFO | -- intersect: -9318742180.45372 [2024-05-16 05:11:52] 2024-05-16 03:11:30,978 | INFO | intersect: -9318742180.45372 [2024-05-16 05:11:52] 2024-05-16 03:11:30,979 | INFO | chi2: 13.000855333819676 [2024-05-16 05:11:52] 2024-05-16 03:11:30,979 | INFO | current chi2=13.000855333819676 (change=19.524213204855723 %) [2024-05-16 05:11:52] 2024-05-16 03:11:30,979 | INFO | right removable region: 1185 [2024-05-16 05:11:52] 2024-05-16 03:11:30,979 | INFO | model: linear, x: [1715756792.0, 1715756853.0, 1715756914.0, 1715756975.0, 1715757036.0, 1715757097.0, 1715757158.0, 1715757219.0, 1715757280.0, 1715757341.0, 1715 [2024-05-16 05:11:52] 2024-05-16 03:11:30,980 | INFO | sum of square deviations: 517287802114.49945 [2024-05-16 05:11:52] 2024-05-16 03:11:30,997 | INFO | sum of deviations: 2064411793911.2905 [2024-05-16 05:11:52] 2024-05-16 03:11:30,997 | INFO | mean x: 1715792934.5008433 [2024-05-16 05:11:52] 2024-05-16 03:11:30,997 | INFO | mean y: 2633240.7150084316 [2024-05-16 05:11:52] 2024-05-16 03:11:30,997 | INFO | -- intersect: -6844818323.799504 [2024-05-16 05:11:52] 2024-05-16 03:11:30,997 | INFO | intersect: -6844818323.799504 [2024-05-16 05:11:52] 2024-05-16 03:11:30,998 | INFO | chi2: 12.954460920549783 [2024-05-16 05:11:52] 2024-05-16 03:11:30,998 | INFO | current chi2=12.954460920549783 (change=19.81139637972586 %) [2024-05-16 05:11:52] 2024-05-16 03:11:30,998 | INFO | left removable region: 10 [2024-05-16 05:11:52] 2024-05-16 03:11:30,999 | INFO | model: linear, x: [1715757097.0, 1715757158.0, 1715757219.0, 1715757280.0, 1715757341.0, 1715757402.0, 1715757463.0, 1715757524.0, 1715757585.0, 1715757646.0, 1715 [2024-05-16 05:11:52] 2024-05-16 03:11:30,999 | INFO | sum of square deviations: 503027544102.99884 [2024-05-16 05:11:52] 2024-05-16 03:11:31,015 | INFO | sum of deviations: 2191034515497.2046 [2024-05-16 05:11:52] 2024-05-16 03:11:31,016 | INFO | mean x: 1715792904.0008512 [2024-05-16 05:11:52] 2024-05-16 03:11:31,016 | INFO | mean y: 2651352.795744681 [2024-05-16 05:11:52] 2024-05-16 03:11:31,016 | INFO | -- intersect: -7470819072.794484 [2024-05-16 05:11:52] 2024-05-16 03:11:31,016 | INFO | intersect: -7470819072.794484 [2024-05-16 05:11:52] 2024-05-16 03:11:31,016 | INFO | chi2: 6.848808693949025 [2024-05-16 05:11:52] 2024-05-16 03:11:31,017 | INFO | -- intersect: -7470819072.794484 [2024-05-16 05:11:52] 2024-05-16 03:11:31,017 | INFO | current memory leak: 4.36 B/s (using 1175 data points, chi2=6.85) [2024-05-16 05:11:52] 2024-05-16 03:11:31,018 | INFO | .............................. [2024-05-16 05:11:52] 2024-05-16 03:11:31,018 | INFO | . Timing measurements: [2024-05-16 05:11:52] 2024-05-16 03:11:31,018 | INFO | . get job = 0 s [2024-05-16 05:11:52] 2024-05-16 03:11:31,018 | INFO | . initial setup = 0 s [2024-05-16 05:11:52] 2024-05-16 03:11:31,018 | INFO | . payload setup = 7 s [2024-05-16 05:11:52] 2024-05-16 03:11:31,018 | INFO | . stage-in = 0 s [2024-05-16 05:11:52] 2024-05-16 03:11:31,018 | INFO | . payload execution = 72594 s [2024-05-16 05:11:52] 2024-05-16 03:11:31,018 | INFO | . stage-out = 2 s [2024-05-16 05:11:52] 2024-05-16 03:11:31,018 | INFO | . log creation = 0 s [2024-05-16 05:11:52] 2024-05-16 03:11:31,018 | INFO | .............................. [2024-05-16 05:11:52] 2024-05-16 03:11:31,073 | INFO | [2024-05-16 05:11:52] 2024-05-16 03:11:31,073 | INFO | job summary report [2024-05-16 05:11:52] 2024-05-16 03:11:31,073 | INFO | -------------------------------------------------- [2024-05-16 05:11:52] 2024-05-16 03:11:31,073 | INFO | PanDA job id: 6199854376 [2024-05-16 05:11:52] 2024-05-16 03:11:31,073 | INFO | task id: 38734053 [2024-05-16 05:11:52] 2024-05-16 03:11:31,073 | INFO | errors: (none) [2024-05-16 05:11:52] 2024-05-16 03:11:31,073 | INFO | status: LOG_TRANSFER = DONE [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | pilot state: finished [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | transexitcode: 0 [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | exeerrorcode: 0 [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | exeerrordiag: [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | exitcode: 0 [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | exitmsg: OK [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | cpuconsumptiontime: 285199 s [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | nevents: 1950 [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | neventsw: 0 [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | pid: 950112 [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | pgrp: 950112 [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | corecount: 4 [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | event service: False [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | sizes: {0: 2394734, 1: 2394933, 4: 2395139, 11: 2395167, 72605: 2473128, 72608: 2482110, 72612: 2482294, 72615: 2482516} [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | -------------------------------------------------- [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | [2024-05-16 05:11:52] 2024-05-16 03:11:31,074 | INFO | executing command: ls -lF /scratch/boinc/var/slot60/slots/1 [2024-05-16 05:11:52] 2024-05-16 03:11:31,092 | INFO | queue jobs had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,092 | INFO | queue payloads had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,092 | INFO | queue data_in had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,092 | INFO | queue data_out had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,092 | INFO | queue current_data_in had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue validated_jobs had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue validated_payloads had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue monitored_payloads had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue finished_jobs had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue finished_payloads had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue finished_data_in had 1 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue finished_data_out had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue failed_jobs had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue failed_payloads had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue failed_data_in had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue failed_data_out had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue completed_jobs had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue completed_jobids has 1 job(s) [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | queue messages had 0 job(s) [purged] [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | job 6199854376 has completed (purged errors) [2024-05-16 05:11:52] 2024-05-16 03:11:31,093 | INFO | overall cleanup function is called [2024-05-16 05:11:52] 2024-05-16 03:11:32,104 | INFO | --- collectZombieJob: --- 10, [950112] [2024-05-16 05:11:52] 2024-05-16 03:11:32,104 | INFO | zombie collector waiting for pid 950112 [2024-05-16 05:11:52] 2024-05-16 03:11:32,104 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2024-05-16 05:11:52] 2024-05-16 03:11:33,109 | INFO | collected zombie processes [2024-05-16 05:11:52] 2024-05-16 03:11:33,109 | INFO | will now attempt to kill all subprocesses of pid=950112 [2024-05-16 05:11:52] 2024-05-16 03:11:33,264 | INFO | process IDs to be killed: [950112] (in reverse order) [2024-05-16 05:11:52] 2024-05-16 03:11:33,383 | WARNING | found no corresponding commands to process id(s) [2024-05-16 05:11:52] 2024-05-16 03:11:33,383 | INFO | Do not look for orphan processes in BOINC jobs [2024-05-16 05:11:52] 2024-05-16 03:11:33,390 | INFO | did not find any defunct processes belonging to 950112 [2024-05-16 05:11:52] 2024-05-16 03:11:33,396 | INFO | did not find any defunct processes belonging to 950112 [2024-05-16 05:11:52] 2024-05-16 03:11:33,396 | INFO | ready for new job [2024-05-16 05:11:52] 2024-05-16 03:11:33,397 | INFO | pilot has finished with previous job - re-establishing logging [2024-05-16 05:11:52] 2024-05-16 03:11:33,401 | INFO | ************************************* [2024-05-16 05:11:52] 2024-05-16 03:11:33,401 | INFO | *** PanDA Pilot version 3.7.5.4 *** [2024-05-16 05:11:52] 2024-05-16 03:11:33,401 | INFO | ************************************* [2024-05-16 05:11:52] 2024-05-16 03:11:33,402 | INFO | [2024-05-16 05:11:52] 2024-05-16 03:11:33,404 | INFO | architecture information: [2024-05-16 05:11:52] 2024-05-16 03:11:33,405 | INFO | executing command: cat /etc/os-release [2024-05-16 05:11:52] 2024-05-16 03:11:33,422 | INFO | cat /etc/os-release: [2024-05-16 05:11:52] NAME="CentOS Linux" [2024-05-16 05:11:52] VERSION="7 (Core)" [2024-05-16 05:11:52] ID="centos" [2024-05-16 05:11:52] ID_LIKE="rhel fedora" [2024-05-16 05:11:52] VERSION_ID="7" [2024-05-16 05:11:52] PRETTY_NAME="CentOS Linux 7 (Core)" [2024-05-16 05:11:52] ANSI_COLOR="0;31" [2024-05-16 05:11:52] CPE_NAME="cpe:/o:centos:centos:7" [2024-05-16 05:11:52] HOME_URL="https://www.centos.org/" [2024-05-16 05:11:52] BUG_REPORT_URL="https://bugs.centos.org/" [2024-05-16 05:11:52] [2024-05-16 05:11:52] CENTOS_MANTISBT_PROJECT="CentOS-7" [2024-05-16 05:11:52] CENTOS_MANTISBT_PROJECT_VERSION="7" [2024-05-16 05:11:52] REDHAT_SUPPORT_PRODUCT="centos" [2024-05-16 05:11:52] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2024-05-16 05:11:52] [2024-05-16 05:11:52] 2024-05-16 03:11:33,422 | INFO | ************************************* [2024-05-16 05:11:52] 2024-05-16 03:11:33,925 | INFO | executing command: df -mP /scratch/boinc/var/slot60/slots/1 [2024-05-16 05:11:52] 2024-05-16 03:11:33,946 | INFO | sufficient remaining disk space (589162348544 B) [2024-05-16 05:11:52] 2024-05-16 03:11:33,947 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2024-05-16 05:11:52] 2024-05-16 03:11:33,947 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2024-05-16 05:11:52] 2024-05-16 03:11:33,947 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2024-05-16 05:11:52] 2024-05-16 03:11:33,948 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2024-05-16 05:11:52] 2024-05-16 03:11:33,948 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2024-05-16 05:11:52] 2024-05-16 03:11:33,948 | INFO | found 0 job(s) in 20 queues [2024-05-16 05:11:52] 2024-05-16 03:11:33,948 | INFO | aborting loop [2024-05-16 05:11:52] 2024-05-16 03:11:33,949 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2024-05-16 05:11:52] 2024-05-16 03:11:33,949 | WARNING | will wait for a maximum of 300 s for threads to finish [2024-05-16 05:11:52] 2024-05-16 03:11:34,184 | INFO | all data control threads have been joined [2024-05-16 05:11:52] 2024-05-16 03:11:34,210 | INFO | all payload control threads have been joined [2024-05-16 05:11:52] 2024-05-16 03:11:34,620 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2024-05-16 05:11:52] 2024-05-16 03:11:34,952 | INFO | [job] retrieve thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:34,952 | INFO | [job] job monitor thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:35,128 | INFO | [data] copytool_in thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:35,190 | INFO | [data] control thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:35,215 | INFO | [payload] control thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:35,377 | INFO | [payload] validate_post thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:35,415 | INFO | all job control threads have been joined [2024-05-16 05:11:52] 2024-05-16 03:11:35,543 | INFO | [payload] failed_post thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:35,612 | INFO | [payload] validate_pre thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:35,662 | INFO | [job] validate thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:35,981 | INFO | [payload] execute_payloads thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:36,079 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2024-05-16 05:11:52] 2024-05-16 03:11:36,169 | INFO | [job] create_data_payload thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:36,420 | INFO | [job] control thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:36,626 | INFO | [data] copytool_out thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:37,084 | INFO | [job] queue monitor thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:37,954 | INFO | [data] queue_monitor thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:44,486 | INFO | job.realtimelogging is not enabled [2024-05-16 05:11:52] 2024-05-16 03:11:45,491 | INFO | [payload] run_realtimelog thread has finished [2024-05-16 05:11:52] 2024-05-16 03:11:46,256 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47311222416448)>', '<ExcThread(monitor, started 47311399642880)>'] [2024-05-16 05:11:52] 2024-05-16 03:11:47,006 | WARNING | job_aborted has been set - aborting pilot monitoring [2024-05-16 05:11:52] 2024-05-16 03:11:47,006 | INFO | [monitor] control thread has ended [2024-05-16 05:11:52] 2024-05-16 03:11:51,281 | INFO | all workflow threads have been joined [2024-05-16 05:11:52] 2024-05-16 03:11:51,281 | INFO | end of generic workflow (traces error code: 0) [2024-05-16 05:11:52] 2024-05-16 03:11:51,282 | INFO | traces error code: 0 [2024-05-16 05:11:52] 2024-05-16 03:11:51,282 | INFO | pilot has finished (exit code=0, shell exit code=0) [2024-05-16 05:11:52] 2024-05-16 03:11:51,371 [wrapper] ==== pilot stdout END ==== [2024-05-16 05:11:52] 2024-05-16 03:11:51,373 [wrapper] ==== wrapper stdout RESUME ==== [2024-05-16 05:11:52] 2024-05-16 03:11:51,375 [wrapper] pilotpid: 933720 [2024-05-16 05:11:52] 2024-05-16 03:11:51,377 [wrapper] Pilot exit status: 0 [2024-05-16 05:11:52] 2024-05-16 03:11:51,398 [wrapper] pandaids: 6199854376 6199854376 [2024-05-16 05:11:52] 2024-05-16 03:11:51,477 [wrapper] cleanup: SIGTERM to supervisor_pilot 3702557 933721 [2024-05-16 05:11:52] 2024-05-16 03:11:51,479 [wrapper] Test setup, not cleaning [2024-05-16 05:11:52] 2024-05-16 03:11:51,480 [wrapper] ==== wrapper stdout END ==== [2024-05-16 05:11:52] 2024-05-16 03:11:51,482 [wrapper] ==== wrapper stderr END ==== [2024-05-16 05:11:52] 2024-05-16 03:11:51,486 [wrapper] apfmon messages muted [2024-05-16 05:11:52] *** Error codes and diagnostics *** [2024-05-16 05:11:52] "exeErrorCode": 0, [2024-05-16 05:11:52] "exeErrorDiag": "", [2024-05-16 05:11:52] "pilotErrorCode": 0, [2024-05-16 05:11:52] "pilotErrorDiag": "", [2024-05-16 05:11:52] *** Listing of results directory *** [2024-05-16 05:11:52] total 1824476 [2024-05-16 05:11:52] drwx------ 4 boinc boinc 4096 May 8 14:24 pilot3 [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 467845 May 9 10:28 pilot3.tar.gz [2024-05-16 05:11:52] -rwx------ 1 boinc boinc 32251 May 9 10:49 runpilot2-wrapper.sh [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 5633 May 9 10:50 queuedata.json [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 100 May 15 07:52 wrapper_26015_x86_64-pc-linux-gnu [2024-05-16 05:11:52] -rwxr-xr-x 1 boinc boinc 7986 May 15 07:52 run_atlas [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 105 May 15 07:52 job.xml [2024-05-16 05:11:52] -rw-r--r-- 3 boinc boinc 326700061 May 15 07:52 EVNT.38734051._000864.pool.root.1 [2024-05-16 05:11:52] -rw-r--r-- 3 boinc boinc 326700061 May 15 07:52 ATLAS.root_0 [2024-05-16 05:11:52] -rw-r--r-- 2 boinc boinc 17537 May 15 07:52 start_atlas.sh [2024-05-16 05:11:52] drwxrwx--x 2 boinc boinc 4096 May 15 07:52 shared [2024-05-16 05:11:52] -rw-r--r-- 2 boinc boinc 480166 May 15 07:52 input.tar.gz [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 0 May 15 07:52 boinc_lockfile [2024-05-16 05:11:52] -rw------- 1 boinc boinc 1324588 May 15 07:52 cric_ddmendpoints.json [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 6668 May 15 09:00 init_data.xml [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 2851 May 15 09:00 pandaJob.out [2024-05-16 05:11:52] -rw------- 1 boinc boinc 424 May 15 09:00 setup.sh.local [2024-05-16 05:11:52] -rw------- 1 boinc boinc 1007426 May 15 09:01 agis_schedconf.cvmfs.json [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 533 May 16 05:03 boinc_task_state.xml [2024-05-16 05:11:52] -rw------- 1 boinc boinc 1181540213 May 16 05:10 HITS.38734053._003556.pool.root.1 [2024-05-16 05:11:52] -rw------- 1 boinc boinc 1061 May 16 05:11 memory_monitor_summary.json [2024-05-16 05:11:52] -rw------- 1 boinc boinc 97 May 16 05:11 pilot_heartbeat.json [2024-05-16 05:11:52] -rw------- 1 boinc boinc 0 May 16 05:11 agis_ddmendpoints.agis.ALL.json [2024-05-16 05:11:52] -rw------- 1 boinc boinc 2102219 May 16 05:11 log.38734053._003556.job.log.tgz.1 [2024-05-16 05:11:52] -rw------- 1 boinc boinc 27938 May 16 05:11 heartbeat.json [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 8192 May 16 05:11 boinc_mmap_file [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 29 May 16 05:11 wrapper_checkpoint.txt [2024-05-16 05:11:52] -rw------- 1 boinc boinc 4416 May 16 05:11 pilotlog.txt [2024-05-16 05:11:52] -rw------- 1 boinc boinc 12774516 May 16 05:11 log.38734053._003556.job.log.1 [2024-05-16 05:11:52] -rw------- 1 boinc boinc 353 May 16 05:11 output.list [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 620 May 16 05:11 runtime_log [2024-05-16 05:11:52] -rw------- 1 boinc boinc 14919680 May 16 05:11 result.tar.gz [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 11487 May 16 05:11 runtime_log.err [2024-05-16 05:11:52] -rw------- 1 boinc boinc 778 May 16 05:11 iB0LDmUeEP5n7Olcko1bjSoqABFKDmABFKDmOtvXDmFMWKDmjNBNnn.diag [2024-05-16 05:11:52] -rw-r--r-- 1 boinc boinc 23651 May 16 05:11 stderr.txt [2024-05-16 05:11:52] HITS file was successfully produced: [2024-05-16 05:11:52] -rw------- 1 boinc boinc 1181540213 May 16 05:10 shared/HITS.pool.root.1 [2024-05-16 05:11:52] *** Contents of shared directory: *** [2024-05-16 05:11:52] total 1487964 [2024-05-16 05:11:52] -rw-r--r-- 3 boinc boinc 326700061 May 15 07:52 ATLAS.root_0 [2024-05-16 05:11:52] -rw-r--r-- 2 boinc boinc 17537 May 15 07:52 start_atlas.sh [2024-05-16 05:11:52] -rw-r--r-- 2 boinc boinc 480166 May 15 07:52 input.tar.gz [2024-05-16 05:11:52] -rw------- 1 boinc boinc 1181540213 May 16 05:10 HITS.pool.root.1 [2024-05-16 05:11:52] -rw------- 1 boinc boinc 14919680 May 16 05:11 result.tar.gz 05:11:54 (926478): run_atlas exited; CPU time 282776.171765 05:11:54 (926478): called boinc_finish(0) </stderr_txt> ]]>
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