Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:41:36 (1476326): wrapper (7.7.26015): starting
21:41:36 (1476326): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 21:41:36] Arguments: --nthreads 4
[2024-05-15 21:41:36] Threads: 4
[2024-05-15 21:41:36] Checking for CVMFS
[2024-05-15 21:41:36] No cvmfs_config command found, will try listing directly
[2024-05-15 21:41:36] CVMFS is ok
[2024-05-15 21:41:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 21:41:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 21:41:36] Further information can be found at the LHC@home message board.
[2024-05-15 21:41:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 21:41:36] Checking for apptainer binary...
[2024-05-15 21:41:36] which: no apptainer in ((null))
[2024-05-15 21:41:36] apptainer is not installed, using version from CVMFS
[2024-05-15 21:41:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 21:41:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2024-05-15 21:41:37] apptainer works
[2024-05-15 21:41:37] Set ATHENA_PROC_NUMBER=4
[2024-05-15 21:41:37] Set ATHENA_CORE_NUMBER=4
[2024-05-15 21:41:38] Starting ATLAS job with PandaID=6199851706
[2024-05-15 21:41:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 18:43:57]  *** The last 200 lines of the pilot log: ***
[2024-05-16 18:43:57] 2024-05-16 16:43:31,291 | INFO     | job 6199851706 has state=finished
[2024-05-16 18:43:57] 2024-05-16 16:43:31,291 | INFO     | preparing for final server update for job 6199851706 in state='finished'
[2024-05-16 18:43:57] 2024-05-16 16:43:31,291 | INFO     | this job has now completed (state=finished)
[2024-05-16 18:43:57] 2024-05-16 16:43:31,292 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 18:43:57] 2024-05-16 16:43:31,292 | INFO     | job 6199851706 has finished - writing final server update
[2024-05-16 18:43:57] 2024-05-16 16:43:31,292 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1403068/.job.ad'
[2024-05-16 18:43:57] 2024-05-16 16:43:31,292 | INFO     | total number of processed events: 1950 (read)
[2024-05-16 18:43:57] 2024-05-16 16:43:31,295 | INFO     | executing command: lscpu
[2024-05-16 18:43:57] 2024-05-16 16:43:31,347 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-05-16 18:43:57] 2024-05-16 16:43:31,347 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 18:43:57] 2024-05-16 16:43:31,381 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 18:43:57] 2024-05-16 16:43:33,016 | INFO     | monitor loop #5754: job 0:6199851706 is in state 'finished'
[2024-05-16 18:43:57] 2024-05-16 16:43:33,016 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 18:43:57] 2024-05-16 16:43:35,525 | INFO     | monitor loop #5755: job 0:6199851706 is in state 'finished'
[2024-05-16 18:43:57] 2024-05-16 16:43:35,525 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 18:43:57] 2024-05-16 16:43:36,027 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-16 18:43:57] 2024-05-16 16:43:36,027 | INFO     | using path: /scratch/boinc/var/slot24/slots/1/PanDA_Pilot-6199851706/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 18:43:57] 2024-05-16 16:43:36,028 | INFO     | extracted standard info from prmon json
[2024-05-16 18:43:57] 2024-05-16 16:43:36,028 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 18:43:57] 2024-05-16 16:43:36,028 | WARNING  | GPU info not found in prmon json
[2024-05-16 18:43:57] 2024-05-16 16:43:36,039 | INFO     | fitting pss+swap vs Time
[2024-05-16 18:43:57] 2024-05-16 16:43:36,040 | INFO     | model: linear, x: [1715802134.0, 1715802195.0, 1715802256.0, 1715802317.0, 1715802378.0, 1715802439.0, 1715802500.0, 1715802561.0, 1715802622.0, 1715802683.0, 1715
[2024-05-16 18:43:57] 2024-05-16 16:43:36,041 | INFO     | sum of square deviations: 592643446740.0
[2024-05-16 18:43:57] 2024-05-16 16:43:36,060 | INFO     | sum of deviations: 2436138731048.9995
[2024-05-16 18:43:57] 2024-05-16 16:43:36,060 | INFO     | mean x: 1715839954.0
[2024-05-16 18:43:57] 2024-05-16 16:43:36,060 | INFO     | mean y: 2630567.360999194
[2024-05-16 18:43:57] 2024-05-16 16:43:36,061 | INFO     | -- intersect: -7050554937.708057
[2024-05-16 18:43:57] 2024-05-16 16:43:36,061 | INFO     | intersect: -7050554937.708057
[2024-05-16 18:43:57] 2024-05-16 16:43:36,061 | INFO     | chi2: 14.627471185069814
[2024-05-16 18:43:57] 2024-05-16 16:43:36,062 | INFO     | model: linear, x: [1715802134.0, 1715802195.0, 1715802256.0, 1715802317.0, 1715802378.0, 1715802439.0, 1715802500.0, 1715802561.0, 1715802622.0, 1715802683.0, 1715
[2024-05-16 18:43:57] 2024-05-16 16:43:36,062 | INFO     | sum of square deviations: 585508968785.0
[2024-05-16 18:43:57] 2024-05-16 16:43:36,082 | INFO     | sum of deviations: 2782797463885.501
[2024-05-16 18:43:57] 2024-05-16 16:43:36,082 | INFO     | mean x: 1715839801.5
[2024-05-16 18:43:57] 2024-05-16 16:43:36,082 | INFO     | mean y: 2637977.6577669904
[2024-05-16 18:43:57] 2024-05-16 16:43:36,082 | INFO     | -- intersect: -8152377406.575109
[2024-05-16 18:43:57] 2024-05-16 16:43:36,082 | INFO     | intersect: -8152377406.575109
[2024-05-16 18:43:57] 2024-05-16 16:43:36,083 | INFO     | chi2: 12.09157370854279
[2024-05-16 18:43:57] 2024-05-16 16:43:36,083 | INFO     | current chi2=12.09157370854279 (change=17.336540571109804 %)
[2024-05-16 18:43:57] 2024-05-16 16:43:36,083 | INFO     | right removable region: 1235
[2024-05-16 18:43:57] 2024-05-16 16:43:36,084 | INFO     | model: linear, x: [1715802439.0, 1715802500.0, 1715802561.0, 1715802622.0, 1715802683.0, 1715802744.0, 1715802805.0, 1715802866.0, 1715802927.0, 1715802988.0, 1715
[2024-05-16 18:43:57] 2024-05-16 16:43:36,084 | INFO     | sum of square deviations: 585508968785.0
[2024-05-16 18:43:57] 2024-05-16 16:43:36,104 | INFO     | sum of deviations: 2052565970090.4998
[2024-05-16 18:43:57] 2024-05-16 16:43:36,104 | INFO     | mean x: 1715840106.5
[2024-05-16 18:43:57] 2024-05-16 16:43:36,104 | INFO     | mean y: 2638763.9134304207
[2024-05-16 18:43:57] 2024-05-16 16:43:36,104 | INFO     | -- intersect: -6012427102.672121
[2024-05-16 18:43:57] 2024-05-16 16:43:36,104 | INFO     | intersect: -6012427102.672121
[2024-05-16 18:43:57] 2024-05-16 16:43:36,105 | INFO     | chi2: 11.549771770522856
[2024-05-16 18:43:57] 2024-05-16 16:43:36,105 | INFO     | current chi2=11.549771770522856 (change=21.040543342094224 %)
[2024-05-16 18:43:57] 2024-05-16 16:43:36,105 | INFO     | left removable region: 10
[2024-05-16 18:43:57] 2024-05-16 16:43:36,106 | INFO     | model: linear, x: [1715802744.0, 1715802805.0, 1715802866.0, 1715802927.0, 1715802988.0, 1715803049.0, 1715803110.0, 1715803171.0, 1715803232.0, 1715803293.0, 1715
[2024-05-16 18:43:57] 2024-05-16 16:43:36,106 | INFO     | sum of square deviations: 570015152700.0
[2024-05-16 18:43:57] 2024-05-16 16:43:36,125 | INFO     | sum of deviations: 2151640098622.0002
[2024-05-16 18:43:57] 2024-05-16 16:43:36,125 | INFO     | mean x: 1715840076.0
[2024-05-16 18:43:57] 2024-05-16 16:43:36,125 | INFO     | mean y: 2654975.315102041
[2024-05-16 18:43:57] 2024-05-16 16:43:36,125 | INFO     | -- intersect: -6474138304.4019
[2024-05-16 18:43:57] 2024-05-16 16:43:36,125 | INFO     | intersect: -6474138304.4019
[2024-05-16 18:43:57] 2024-05-16 16:43:36,126 | INFO     | chi2: 6.279247121251699
[2024-05-16 18:43:57] 2024-05-16 16:43:36,126 | INFO     | -- intersect: -6474138304.4019
[2024-05-16 18:43:57] 2024-05-16 16:43:36,126 | INFO     | current memory leak: 3.77 B/s (using 1225 data points, chi2=6.28)
[2024-05-16 18:43:57] 2024-05-16 16:43:36,127 | INFO     | ..............................
[2024-05-16 18:43:57] 2024-05-16 16:43:36,127 | INFO     | . Timing measurements:
[2024-05-16 18:43:57] 2024-05-16 16:43:36,127 | INFO     | . get job = 0 s
[2024-05-16 18:43:57] 2024-05-16 16:43:36,127 | INFO     | . initial setup = 1 s
[2024-05-16 18:43:57] 2024-05-16 16:43:36,127 | INFO     | . payload setup = 7 s
[2024-05-16 18:43:57] 2024-05-16 16:43:36,127 | INFO     | . stage-in = 0 s
[2024-05-16 18:43:57] 2024-05-16 16:43:36,127 | INFO     | . payload execution = 75669 s
[2024-05-16 18:43:57] 2024-05-16 16:43:36,127 | INFO     | . stage-out = 2 s
[2024-05-16 18:43:57] 2024-05-16 16:43:36,127 | INFO     | . log creation = 0 s
[2024-05-16 18:43:57] 2024-05-16 16:43:36,127 | INFO     | ..............................
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | 
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | job summary report
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | --------------------------------------------------
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | PanDA job id: 6199851706
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | task id: 38734053
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | errors: (none)
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | pilot state: finished 
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | transexitcode: 0
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | exeerrorcode: 0
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | exeerrordiag: 
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | exitcode: 0
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | exitmsg: OK
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | cpuconsumptiontime: 296743 s
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | nevents: 1950
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | neventsw: 0
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | pid: 1490604
[2024-05-16 18:43:57] 2024-05-16 16:43:36,184 | INFO     | pgrp: 1490604
[2024-05-16 18:43:57] 2024-05-16 16:43:36,185 | INFO     | corecount: 4
[2024-05-16 18:43:57] 2024-05-16 16:43:36,185 | INFO     | event service: False
[2024-05-16 18:43:57] 2024-05-16 16:43:36,185 | INFO     | sizes: {0: 2392599, 4: 2392805, 11: 2392833, 75681: 2472157, 75683: 2481139, 75687: 2481195, 75694: 2481545}
[2024-05-16 18:43:57] 2024-05-16 16:43:36,185 | INFO     | --------------------------------------------------
[2024-05-16 18:43:57] 2024-05-16 16:43:36,185 | INFO     | 
[2024-05-16 18:43:57] 2024-05-16 16:43:36,185 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/1
[2024-05-16 18:43:57] 2024-05-16 16:43:36,201 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,202 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 18:43:57] 2024-05-16 16:43:36,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,203 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 18:43:57] 2024-05-16 16:43:36,203 | INFO     | job 6199851706 has completed (purged errors)
[2024-05-16 18:43:57] 2024-05-16 16:43:36,203 | INFO     | overall cleanup function is called
[2024-05-16 18:43:57] 2024-05-16 16:43:37,214 | INFO     | --- collectZombieJob: --- 10, [1490604]
[2024-05-16 18:43:57] 2024-05-16 16:43:37,214 | INFO     | zombie collector waiting for pid 1490604
[2024-05-16 18:43:57] 2024-05-16 16:43:37,214 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 18:43:57] 2024-05-16 16:43:38,219 | INFO     | collected zombie processes
[2024-05-16 18:43:57] 2024-05-16 16:43:38,220 | INFO     | will now attempt to kill all subprocesses of pid=1490604
[2024-05-16 18:43:57] 2024-05-16 16:43:38,454 | INFO     | process IDs to be killed: [1490604] (in reverse order)
[2024-05-16 18:43:57] 2024-05-16 16:43:38,616 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 18:43:57] 2024-05-16 16:43:38,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 18:43:57] 2024-05-16 16:43:38,627 | INFO     | did not find any defunct processes belonging to 1490604
[2024-05-16 18:43:57] 2024-05-16 16:43:38,638 | INFO     | did not find any defunct processes belonging to 1490604
[2024-05-16 18:43:57] 2024-05-16 16:43:38,639 | INFO     | ready for new job
[2024-05-16 18:43:57] 2024-05-16 16:43:38,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 18:43:57] 2024-05-16 16:43:38,645 | INFO     | *************************************
[2024-05-16 18:43:57] 2024-05-16 16:43:38,645 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 18:43:57] 2024-05-16 16:43:38,645 | INFO     | *************************************
[2024-05-16 18:43:57] 2024-05-16 16:43:38,645 | INFO     | 
[2024-05-16 18:43:57] 2024-05-16 16:43:38,650 | INFO     | architecture information:
[2024-05-16 18:43:57] 2024-05-16 16:43:38,651 | INFO     | executing command: cat /etc/os-release
[2024-05-16 18:43:57] 2024-05-16 16:43:38,668 | INFO     | cat /etc/os-release:
[2024-05-16 18:43:57] NAME="CentOS Linux"
[2024-05-16 18:43:57] VERSION="7 (Core)"
[2024-05-16 18:43:57] ID="centos"
[2024-05-16 18:43:57] ID_LIKE="rhel fedora"
[2024-05-16 18:43:57] VERSION_ID="7"
[2024-05-16 18:43:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 18:43:57] ANSI_COLOR="0;31"
[2024-05-16 18:43:57] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 18:43:57] HOME_URL="https://www.centos.org/"
[2024-05-16 18:43:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 18:43:57] 
[2024-05-16 18:43:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 18:43:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 18:43:57] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 18:43:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 18:43:57] 
[2024-05-16 18:43:57] 2024-05-16 16:43:38,669 | INFO     | *************************************
[2024-05-16 18:43:57] 2024-05-16 16:43:39,172 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/1
[2024-05-16 18:43:57] 2024-05-16 16:43:39,194 | INFO     | sufficient remaining disk space (561457922048 B)
[2024-05-16 18:43:57] 2024-05-16 16:43:39,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 18:43:57] 2024-05-16 16:43:39,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 18:43:57] 2024-05-16 16:43:39,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 18:43:57] 2024-05-16 16:43:39,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 18:43:57] 2024-05-16 16:43:39,195 | INFO     | aborting loop
[2024-05-16 18:43:57] 2024-05-16 16:43:39,219 | INFO     | all data control threads have been joined
[2024-05-16 18:43:57] 2024-05-16 16:43:39,320 | INFO     | all job control threads have been joined
[2024-05-16 18:43:57] 2024-05-16 16:43:39,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 18:43:57] 2024-05-16 16:43:39,416 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 18:43:57] 2024-05-16 16:43:39,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 18:43:57] 2024-05-16 16:43:39,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 18:43:57] 2024-05-16 16:43:40,200 | INFO     | [job] job monitor thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:40,200 | INFO     | [job] retrieve thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:40,224 | INFO     | [data] control thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:40,325 | INFO     | [job] control thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:40,484 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:40,538 | INFO     | all payload control threads have been joined
[2024-05-16 18:43:57] 2024-05-16 16:43:40,618 | INFO     | [payload] failed_post thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:40,705 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:41,113 | INFO     | [data] copytool_in thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:41,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 18:43:57] 2024-05-16 16:43:41,200 | INFO     | [data] copytool_out thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:41,352 | INFO     | [payload] validate_post thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:41,525 | INFO     | [job] validate thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:41,543 | INFO     | [payload] control thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:41,689 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:42,198 | INFO     | [job] queue monitor thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:43,420 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:49,426 | INFO     | job.realtimelogging is not enabled
[2024-05-16 18:43:57] 2024-05-16 16:43:50,431 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 18:43:57] 2024-05-16 16:43:51,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47075768296512)>', '<ExcThread(monitor, started 47076077496064)>']
[2024-05-16 18:43:57] 2024-05-16 16:43:51,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 18:43:57] 2024-05-16 16:43:51,469 | INFO     | [monitor] control thread has ended
[2024-05-16 18:43:57] 2024-05-16 16:43:56,397 | INFO     | all workflow threads have been joined
[2024-05-16 18:43:57] 2024-05-16 16:43:56,397 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 18:43:57] 2024-05-16 16:43:56,397 | INFO     | traces error code: 0
[2024-05-16 18:43:57] 2024-05-16 16:43:56,398 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 18:43:57] 2024-05-16 16:43:56,544 [wrapper] ==== pilot stdout END ====
[2024-05-16 18:43:57] 2024-05-16 16:43:56,547 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 18:43:57] 2024-05-16 16:43:56,549 [wrapper] pilotpid: 1482851
[2024-05-16 18:43:57] 2024-05-16 16:43:56,551 [wrapper] Pilot exit status: 0
[2024-05-16 18:43:57] 2024-05-16 16:43:56,567 [wrapper] pandaids: 6199851706
[2024-05-16 18:43:57] 2024-05-16 16:43:56,663 [wrapper] cleanup: SIGTERM to supervisor_pilot  155378 1482852
[2024-05-16 18:43:57] 2024-05-16 16:43:56,666 [wrapper] Test setup, not cleaning
[2024-05-16 18:43:57] 2024-05-16 16:43:56,668 [wrapper] ==== wrapper stdout END ====
[2024-05-16 18:43:57] 2024-05-16 16:43:56,671 [wrapper] ==== wrapper stderr END ====
[2024-05-16 18:43:57] 2024-05-16 16:43:56,678 [wrapper] apfmon messages muted
[2024-05-16 18:43:57]  *** Error codes and diagnostics ***
[2024-05-16 18:43:57]     "exeErrorCode": 0,
[2024-05-16 18:43:57]     "exeErrorDiag": "",
[2024-05-16 18:43:57]     "pilotErrorCode": 0,
[2024-05-16 18:43:57]     "pilotErrorDiag": "",
[2024-05-16 18:43:57]  *** Listing of results directory ***
[2024-05-16 18:43:57] total 1514492
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc     467845 May  9 10:28 pilot3.tar.gz
[2024-05-16 18:43:57] -rwx------ 1 boinc boinc      32251 May  9 10:45 runpilot2-wrapper.sh
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc       5633 May  9 10:46 queuedata.json
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc        100 May 15 21:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 18:43:57] -rwxr-xr-x 1 boinc boinc       7986 May 15 21:39 run_atlas
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc        105 May 15 21:39 job.xml
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc       6663 May 15 21:41 init_data.xml
[2024-05-16 18:43:57] -rw-r--r-- 2 boinc boinc  330080230 May 15 21:41 EVNT.38734051._000825.pool.root.1
[2024-05-16 18:43:57] -rw-r--r-- 2 boinc boinc      17537 May 15 21:41 start_atlas.sh
[2024-05-16 18:43:57] drwxrwx--x 2 boinc boinc       4096 May 15 21:41 shared
[2024-05-16 18:43:57] -rw-r--r-- 2 boinc boinc     480158 May 15 21:41 input.tar.gz
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc          0 May 15 21:41 boinc_lockfile
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc       2851 May 15 21:41 pandaJob.out
[2024-05-16 18:43:57] -rw------- 1 boinc boinc        424 May 15 21:41 setup.sh.local
[2024-05-16 18:43:57] -rw------- 1 boinc boinc    1011323 May 15 21:41 agis_schedconf.cvmfs.json
[2024-05-16 18:43:57] -rw------- 1 boinc boinc    1324701 May 15 21:41 cric_ddmendpoints.json
[2024-05-16 18:43:57] drwx------ 4 boinc boinc       4096 May 15 21:41 pilot3
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc        532 May 16 18:33 boinc_task_state.xml
[2024-05-16 18:43:57] -rw------- 1 boinc boinc 1185836297 May 16 18:42 HITS.38734053._003351.pool.root.1
[2024-05-16 18:43:57] -rw------- 1 boinc boinc       1066 May 16 18:43 memory_monitor_summary.json
[2024-05-16 18:43:57] -rw------- 1 boinc boinc         95 May 16 18:43 pilot_heartbeat.json
[2024-05-16 18:43:57] -rw------- 1 boinc boinc          0 May 16 18:43 agis_ddmendpoints.agis.ALL.json
[2024-05-16 18:43:57] -rw------- 1 boinc boinc    2138764 May 16 18:43 log.38734053._003351.job.log.tgz.1
[2024-05-16 18:43:57] -rw------- 1 boinc boinc      28240 May 16 18:43 heartbeat.json
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc       8192 May 16 18:43 boinc_mmap_file
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc         29 May 16 18:43 wrapper_checkpoint.txt
[2024-05-16 18:43:57] -rw------- 1 boinc boinc       4293 May 16 18:43 pilotlog.txt
[2024-05-16 18:43:57] -rw------- 1 boinc boinc   13537670 May 16 18:43 log.38734053._003351.job.log.1
[2024-05-16 18:43:57] -rw------- 1 boinc boinc        353 May 16 18:43 output.list
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc        620 May 16 18:43 runtime_log
[2024-05-16 18:43:57] -rw------- 1 boinc boinc   15718400 May 16 18:43 result.tar.gz
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc      11410 May 16 18:43 runtime_log.err
[2024-05-16 18:43:57] -rw------- 1 boinc boinc        665 May 16 18:43 eduKDmVaEP5n7Olcko1bjSoqABFKDmABFKDmOtvXDmDLWKDmXzfIvm.diag
[2024-05-16 18:43:57] -rw-r--r-- 1 boinc boinc      21642 May 16 18:43 stderr.txt
[2024-05-16 18:43:57] HITS file was successfully produced:
[2024-05-16 18:43:57] -rw------- 1 boinc boinc 1185836297 May 16 18:42 shared/HITS.pool.root.1
[2024-05-16 18:43:57]  *** Contents of shared directory: ***
[2024-05-16 18:43:57] total 1496240
[2024-05-16 18:43:57] -rw-r--r-- 2 boinc boinc  330080230 May 15 21:41 ATLAS.root_0
[2024-05-16 18:43:57] -rw-r--r-- 2 boinc boinc      17537 May 15 21:41 start_atlas.sh
[2024-05-16 18:43:57] -rw-r--r-- 2 boinc boinc     480158 May 15 21:41 input.tar.gz
[2024-05-16 18:43:57] -rw------- 1 boinc boinc 1185836297 May 16 18:42 HITS.pool.root.1
[2024-05-16 18:43:57] -rw------- 1 boinc boinc   15718400 May 16 18:43 result.tar.gz
18:43:59 (1476326): run_atlas exited; CPU time 294385.868266
18:43:59 (1476326): called boinc_finish(0)

</stderr_txt>
]]>

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