Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:52:34 (2020899): wrapper (7.7.26015): starting
15:52:34 (2020899): wrapper: running run_atlas (--nthreads 4)
[2024-05-15 15:52:34] Arguments: --nthreads 4
[2024-05-15 15:52:34] Threads: 4
[2024-05-15 15:52:34] Checking for CVMFS
[2024-05-15 15:52:34] No cvmfs_config command found, will try listing directly
[2024-05-15 15:52:34] CVMFS is ok
[2024-05-15 15:52:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-15 15:52:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-15 15:52:34] Further information can be found at the LHC@home message board.
[2024-05-15 15:52:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-15 15:52:34] Checking for apptainer binary...
[2024-05-15 15:52:34] which: no apptainer in ((null))
[2024-05-15 15:52:34] apptainer is not installed, using version from CVMFS
[2024-05-15 15:52:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-15 15:52:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-05-15 15:52:35] apptainer works
[2024-05-15 15:52:35] Set ATHENA_PROC_NUMBER=4
[2024-05-15 15:52:35] Set ATHENA_CORE_NUMBER=4
[2024-05-15 15:52:35] Starting ATLAS job with PandaID=6199854256
[2024-05-15 15:52:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 11:38:20]  *** The last 200 lines of the pilot log: ***
[2024-05-16 11:38:20] 2024-05-16 09:37:54,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 11:38:20] 2024-05-16 09:37:54,923 | INFO     | job 6199854256 has state=finished
[2024-05-16 11:38:20] 2024-05-16 09:37:54,923 | INFO     | preparing for final server update for job 6199854256 in state='finished'
[2024-05-16 11:38:20] 2024-05-16 09:37:54,924 | INFO     | this job has now completed (state=finished)
[2024-05-16 11:38:20] 2024-05-16 09:37:54,924 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-16 11:38:20] 2024-05-16 09:37:54,924 | INFO     | job 6199854256 has finished - writing final server update
[2024-05-16 11:38:20] 2024-05-16 09:37:54,924 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_608780/.job.ad'
[2024-05-16 11:38:20] 2024-05-16 09:37:54,924 | INFO     | total number of processed events: 1950 (read)
[2024-05-16 11:38:20] 2024-05-16 09:37:54,932 | INFO     | executing command: lscpu
[2024-05-16 11:38:20] 2024-05-16 09:37:54,989 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-05-16 11:38:20] 2024-05-16 09:37:54,989 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-16 11:38:20] 2024-05-16 09:37:55,030 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-16 11:38:20] 2024-05-16 09:37:57,041 | INFO     | monitor loop #5270: job 0:6199854256 is in state 'finished'
[2024-05-16 11:38:20] 2024-05-16 09:37:57,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 11:38:20] 2024-05-16 09:37:59,545 | INFO     | monitor loop #5271: job 0:6199854256 is in state 'finished'
[2024-05-16 11:38:20] 2024-05-16 09:37:59,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-16 11:38:20] 2024-05-16 09:38:01,082 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-16 11:38:20] 2024-05-16 09:38:01,083 | INFO     | using path: /scratch/boinc/var/slot84/slots/1/PanDA_Pilot-6199854256/memory_monitor_summary.json (trf name=prmon)
[2024-05-16 11:38:20] 2024-05-16 09:38:01,084 | INFO     | extracted standard info from prmon json
[2024-05-16 11:38:20] 2024-05-16 09:38:01,084 | INFO     | extracted standard memory fields from prmon json
[2024-05-16 11:38:20] 2024-05-16 09:38:01,084 | WARNING  | GPU info not found in prmon json
[2024-05-16 11:38:20] 2024-05-16 09:38:01,104 | INFO     | fitting pss+swap vs Time
[2024-05-16 11:38:20] 2024-05-16 09:38:01,106 | INFO     | model: linear, x: [1715781194.0, 1715781255.0, 1715781316.0, 1715781377.0, 1715781438.0, 1715781499.0, 1715781560.0, 1715781621.0, 1715781682.0, 1715781743.0, 1715
[2024-05-16 11:38:20] 2024-05-16 09:38:01,106 | INFO     | sum of square deviations: 491556853727.5
[2024-05-16 11:38:20] 2024-05-16 09:38:01,138 | INFO     | sum of deviations: 2303348694748.0005
[2024-05-16 11:38:20] 2024-05-16 09:38:01,138 | INFO     | mean x: 1715816726.5
[2024-05-16 11:38:20] 2024-05-16 09:38:01,138 | INFO     | mean y: 2632647.0720411665
[2024-05-16 11:38:20] 2024-05-16 09:38:01,139 | INFO     | -- intersect: -8037381824.176621
[2024-05-16 11:38:20] 2024-05-16 09:38:01,139 | INFO     | intersect: -8037381824.176621
[2024-05-16 11:38:20] 2024-05-16 09:38:01,140 | INFO     | chi2: 15.316077557615502
[2024-05-16 11:38:20] 2024-05-16 09:38:01,141 | INFO     | model: linear, x: [1715781194.0, 1715781255.0, 1715781316.0, 1715781377.0, 1715781438.0, 1715781499.0, 1715781560.0, 1715781621.0, 1715781682.0, 1715781743.0, 1715
[2024-05-16 11:38:20] 2024-05-16 09:38:01,141 | INFO     | sum of square deviations: 485260298460.0
[2024-05-16 11:38:20] 2024-05-16 09:38:01,162 | INFO     | sum of deviations: 2661755696629.0015
[2024-05-16 11:38:20] 2024-05-16 09:38:01,162 | INFO     | mean x: 1715816574.0
[2024-05-16 11:38:20] 2024-05-16 09:38:01,162 | INFO     | mean y: 2641326.0585701982
[2024-05-16 11:38:20] 2024-05-16 09:38:01,162 | INFO     | -- intersect: -9408976633.846346
[2024-05-16 11:38:20] 2024-05-16 09:38:01,162 | INFO     | intersect: -9408976633.846346
[2024-05-16 11:38:20] 2024-05-16 09:38:01,163 | INFO     | chi2: 12.26691683923123
[2024-05-16 11:38:20] 2024-05-16 09:38:01,163 | INFO     | current chi2=12.26691683923123 (change=19.908235035465456 %)
[2024-05-16 11:38:20] 2024-05-16 09:38:01,163 | INFO     | right removable region: 1160
[2024-05-16 11:38:20] 2024-05-16 09:38:01,164 | INFO     | model: linear, x: [1715781499.0, 1715781560.0, 1715781621.0, 1715781682.0, 1715781743.0, 1715781804.0, 1715781865.0, 1715781926.0, 1715781987.0, 1715782048.0, 1715
[2024-05-16 11:38:20] 2024-05-16 09:38:01,164 | INFO     | sum of square deviations: 485260298460.0
[2024-05-16 11:38:20] 2024-05-16 09:38:01,180 | INFO     | sum of deviations: 1937210596786.9993
[2024-05-16 11:38:20] 2024-05-16 09:38:01,180 | INFO     | mean x: 1715816879.0
[2024-05-16 11:38:20] 2024-05-16 09:38:01,180 | INFO     | mean y: 2641512.100775194
[2024-05-16 11:38:20] 2024-05-16 09:38:01,180 | INFO     | -- intersect: -6847081514.2695465
[2024-05-16 11:38:20] 2024-05-16 09:38:01,180 | INFO     | intersect: -6847081514.2695465
[2024-05-16 11:38:20] 2024-05-16 09:38:01,181 | INFO     | chi2: 12.137384872437112
[2024-05-16 11:38:20] 2024-05-16 09:38:01,181 | INFO     | current chi2=12.137384872437112 (change=20.75396049165259 %)
[2024-05-16 11:38:20] 2024-05-16 09:38:01,181 | INFO     | left removable region: 10
[2024-05-16 11:38:20] 2024-05-16 09:38:01,181 | INFO     | model: linear, x: [1715781804.0, 1715781865.0, 1715781926.0, 1715781987.0, 1715782048.0, 1715782109.0, 1715782170.0, 1715782231.0, 1715782292.0, 1715782353.0, 1715
[2024-05-16 11:38:20] 2024-05-16 09:38:01,182 | INFO     | sum of square deviations: 471597632987.5
[2024-05-16 11:38:20] 2024-05-16 09:38:01,196 | INFO     | sum of deviations: 2059493386046.4995
[2024-05-16 11:38:20] 2024-05-16 09:38:01,196 | INFO     | mean x: 1715816848.5
[2024-05-16 11:38:20] 2024-05-16 09:38:01,197 | INFO     | mean y: 2659679.0773913045
[2024-05-16 11:38:20] 2024-05-16 09:38:01,197 | INFO     | -- intersect: -7490408996.368149
[2024-05-16 11:38:20] 2024-05-16 09:38:01,197 | INFO     | intersect: -7490408996.368149
[2024-05-16 11:38:20] 2024-05-16 09:38:01,197 | INFO     | chi2: 6.288656413762885
[2024-05-16 11:38:20] 2024-05-16 09:38:01,198 | INFO     | -- intersect: -7490408996.368149
[2024-05-16 11:38:20] 2024-05-16 09:38:01,198 | INFO     | current memory leak: 4.37 B/s (using 1150 data points, chi2=6.29)
[2024-05-16 11:38:20] 2024-05-16 09:38:01,199 | INFO     | ..............................
[2024-05-16 11:38:20] 2024-05-16 09:38:01,199 | INFO     | . Timing measurements:
[2024-05-16 11:38:20] 2024-05-16 09:38:01,199 | INFO     | . get job = 0 s
[2024-05-16 11:38:20] 2024-05-16 09:38:01,199 | INFO     | . initial setup = 1 s
[2024-05-16 11:38:20] 2024-05-16 09:38:01,199 | INFO     | . payload setup = 9 s
[2024-05-16 11:38:20] 2024-05-16 09:38:01,199 | INFO     | . stage-in = 0 s
[2024-05-16 11:38:20] 2024-05-16 09:38:01,199 | INFO     | . payload execution = 71076 s
[2024-05-16 11:38:20] 2024-05-16 09:38:01,199 | INFO     | . stage-out = 2 s
[2024-05-16 11:38:20] 2024-05-16 09:38:01,199 | INFO     | . log creation = 0 s
[2024-05-16 11:38:20] 2024-05-16 09:38:01,199 | INFO     | ..............................
[2024-05-16 11:38:20] 2024-05-16 09:38:01,676 | INFO     | 
[2024-05-16 11:38:20] 2024-05-16 09:38:01,676 | INFO     | job summary report
[2024-05-16 11:38:20] 2024-05-16 09:38:01,676 | INFO     | --------------------------------------------------
[2024-05-16 11:38:20] 2024-05-16 09:38:01,676 | INFO     | PanDA job id: 6199854256
[2024-05-16 11:38:20] 2024-05-16 09:38:01,676 | INFO     | task id: 38734053
[2024-05-16 11:38:20] 2024-05-16 09:38:01,676 | INFO     | errors: (none)
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | pilot state: finished 
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | transexitcode: 0
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | exeerrorcode: 0
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | exeerrordiag: 
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | exitcode: 0
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | exitmsg: OK
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | cpuconsumptiontime: 277843 s
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | nevents: 1950
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | neventsw: 0
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | pid: 2034073
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | pgrp: 2034073
[2024-05-16 11:38:20] 2024-05-16 09:38:01,677 | INFO     | corecount: 4
[2024-05-16 11:38:20] 2024-05-16 09:38:01,678 | INFO     | event service: False
[2024-05-16 11:38:20] 2024-05-16 09:38:01,678 | INFO     | sizes: {0: 2397047, 1: 2397047, 5: 2397281, 11: 2397337, 71089: 2473551, 71092: 2482533, 71093: 2482717, 71101: 2482939}
[2024-05-16 11:38:20] 2024-05-16 09:38:01,678 | INFO     | --------------------------------------------------
[2024-05-16 11:38:20] 2024-05-16 09:38:01,678 | INFO     | 
[2024-05-16 11:38:20] 2024-05-16 09:38:01,678 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/1
[2024-05-16 11:38:20] 2024-05-16 09:38:01,703 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,703 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,703 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,703 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,703 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,704 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,704 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,704 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,704 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,704 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,705 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,705 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 11:38:20] 2024-05-16 09:38:01,705 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,705 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 11:38:20] 2024-05-16 09:38:01,705 | INFO     | job 6199854256 has completed (purged errors)
[2024-05-16 11:38:20] 2024-05-16 09:38:01,705 | INFO     | overall cleanup function is called
[2024-05-16 11:38:20] 2024-05-16 09:38:02,719 | INFO     | --- collectZombieJob: --- 10, [2034073]
[2024-05-16 11:38:20] 2024-05-16 09:38:02,719 | INFO     | zombie collector waiting for pid 2034073
[2024-05-16 11:38:20] 2024-05-16 09:38:02,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 11:38:20] 2024-05-16 09:38:03,724 | INFO     | collected zombie processes
[2024-05-16 11:38:20] 2024-05-16 09:38:03,724 | INFO     | will now attempt to kill all subprocesses of pid=2034073
[2024-05-16 11:38:20] 2024-05-16 09:38:03,945 | INFO     | process IDs to be killed: [2034073] (in reverse order)
[2024-05-16 11:38:20] 2024-05-16 09:38:04,156 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 11:38:20] 2024-05-16 09:38:04,157 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 11:38:20] 2024-05-16 09:38:04,175 | INFO     | did not find any defunct processes belonging to 2034073
[2024-05-16 11:38:20] 2024-05-16 09:38:04,190 | INFO     | did not find any defunct processes belonging to 2034073
[2024-05-16 11:38:20] 2024-05-16 09:38:04,191 | INFO     | ready for new job
[2024-05-16 11:38:20] 2024-05-16 09:38:04,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 11:38:20] 2024-05-16 09:38:04,198 | INFO     | *************************************
[2024-05-16 11:38:20] 2024-05-16 09:38:04,198 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 11:38:20] 2024-05-16 09:38:04,198 | INFO     | *************************************
[2024-05-16 11:38:20] 2024-05-16 09:38:04,198 | INFO     | 
[2024-05-16 11:38:20] 2024-05-16 09:38:04,205 | INFO     | architecture information:
[2024-05-16 11:38:20] 2024-05-16 09:38:04,207 | INFO     | executing command: cat /etc/os-release
[2024-05-16 11:38:20] 2024-05-16 09:38:04,222 | INFO     | cat /etc/os-release:
[2024-05-16 11:38:20] NAME="CentOS Linux"
[2024-05-16 11:38:20] VERSION="7 (Core)"
[2024-05-16 11:38:20] ID="centos"
[2024-05-16 11:38:20] ID_LIKE="rhel fedora"
[2024-05-16 11:38:20] VERSION_ID="7"
[2024-05-16 11:38:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 11:38:20] ANSI_COLOR="0;31"
[2024-05-16 11:38:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 11:38:20] HOME_URL="https://www.centos.org/"
[2024-05-16 11:38:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 11:38:20] 
[2024-05-16 11:38:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 11:38:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 11:38:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 11:38:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 11:38:20] 
[2024-05-16 11:38:20] 2024-05-16 09:38:04,223 | INFO     | *************************************
[2024-05-16 11:38:20] 2024-05-16 09:38:04,725 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/1
[2024-05-16 11:38:20] 2024-05-16 09:38:04,748 | INFO     | sufficient remaining disk space (3055797927936 B)
[2024-05-16 11:38:20] 2024-05-16 09:38:04,749 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 11:38:20] 2024-05-16 09:38:04,749 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 11:38:20] 2024-05-16 09:38:04,960 | INFO     | all payload control threads have been joined
[2024-05-16 11:38:20] 2024-05-16 09:38:05,349 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 11:38:20] 2024-05-16 09:38:05,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 11:38:20] 2024-05-16 09:38:05,349 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 11:38:20] 2024-05-16 09:38:05,354 | INFO     | all data control threads have been joined
[2024-05-16 11:38:20] 2024-05-16 09:38:05,506 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 11:38:20] 2024-05-16 09:38:05,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 11:38:20] 2024-05-16 09:38:05,560 | INFO     | aborting loop
[2024-05-16 11:38:20] 2024-05-16 09:38:05,754 | INFO     | [job] retrieve thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:05,821 | INFO     | [payload] failed_post thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:05,951 | INFO     | all job control threads have been joined
[2024-05-16 11:38:20] 2024-05-16 09:38:05,966 | INFO     | [payload] control thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:06,011 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:06,166 | INFO     | [payload] validate_post thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:06,274 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 11:38:20] 2024-05-16 09:38:06,284 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:06,359 | INFO     | [data] control thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:06,565 | INFO     | [job] job monitor thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:06,710 | INFO     | [data] copytool_in thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:06,956 | INFO     | [job] control thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:07,088 | INFO     | [job] validate thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:07,090 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:07,178 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:07,280 | INFO     | [job] queue monitor thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:07,511 | INFO     | [data] copytool_out thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:08,012 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 11:38:20] 2024-05-16 09:38:12,017 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 11:38:20] 2024-05-16 09:38:14,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47968982656064)>', '<ExcThread(monitor, started 47969357281024)>']
[2024-05-16 11:38:20] 2024-05-16 09:38:14,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 11:38:20] 2024-05-16 09:38:14,389 | INFO     | [monitor] control thread has ended
[2024-05-16 11:38:20] 2024-05-16 09:38:19,127 | INFO     | all workflow threads have been joined
[2024-05-16 11:38:20] 2024-05-16 09:38:19,127 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 11:38:20] 2024-05-16 09:38:19,127 | INFO     | traces error code: 0
[2024-05-16 11:38:20] 2024-05-16 09:38:19,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 11:38:20] 2024-05-16 09:38:19,210 [wrapper] ==== pilot stdout END ====
[2024-05-16 11:38:20] 2024-05-16 09:38:19,212 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 11:38:20] 2024-05-16 09:38:19,214 [wrapper] pilotpid: 2025627
[2024-05-16 11:38:20] 2024-05-16 09:38:19,221 [wrapper] Pilot exit status: 0
[2024-05-16 11:38:20] 2024-05-16 09:38:19,266 [wrapper] pandaids: 6199854256
[2024-05-16 11:38:20] 2024-05-16 09:38:19,395 [wrapper] cleanup: SIGTERM to supervisor_pilot 3774272 2025628
[2024-05-16 11:38:20] 2024-05-16 09:38:19,398 [wrapper] Test setup, not cleaning
[2024-05-16 11:38:20] 2024-05-16 09:38:19,400 [wrapper] ==== wrapper stdout END ====
[2024-05-16 11:38:20] 2024-05-16 09:38:19,403 [wrapper] ==== wrapper stderr END ====
[2024-05-16 11:38:20] 2024-05-16 09:38:19,407 [wrapper] apfmon messages muted
[2024-05-16 11:38:20]  *** Error codes and diagnostics ***
[2024-05-16 11:38:20]     "exeErrorCode": 0,
[2024-05-16 11:38:20]     "exeErrorDiag": "",
[2024-05-16 11:38:20]     "pilotErrorCode": 0,
[2024-05-16 11:38:20]     "pilotErrorDiag": "",
[2024-05-16 11:38:20]  *** Listing of results directory ***
[2024-05-16 11:38:20] total 1497312
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc     467845 May  9 10:28 pilot3.tar.gz
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc       5633 May  9 10:46 queuedata.json
[2024-05-16 11:38:20] -rwx------ 1 boinc boinc      32251 May  9 10:46 runpilot2-wrapper.sh
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc        100 May 15 15:52 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 11:38:20] -rwxr-xr-x 1 boinc boinc       7986 May 15 15:52 run_atlas
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc        105 May 15 15:52 job.xml
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc       6643 May 15 15:52 init_data.xml
[2024-05-16 11:38:20] -rw-r--r-- 2 boinc boinc  326725574 May 15 15:52 EVNT.38734051._000855.pool.root.1
[2024-05-16 11:38:20] -rw-r--r-- 2 boinc boinc      17537 May 15 15:52 start_atlas.sh
[2024-05-16 11:38:20] drwxrwx--x 2 boinc boinc       4096 May 15 15:52 shared
[2024-05-16 11:38:20] -rw-r--r-- 2 boinc boinc     480161 May 15 15:52 input.tar.gz
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc          0 May 15 15:52 boinc_lockfile
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc       2851 May 15 15:52 pandaJob.out
[2024-05-16 11:38:20] -rw------- 1 boinc boinc        424 May 15 15:52 setup.sh.local
[2024-05-16 11:38:20] -rw------- 1 boinc boinc    1010550 May 15 15:52 agis_schedconf.cvmfs.json
[2024-05-16 11:38:20] -rw------- 1 boinc boinc    1325758 May 15 15:52 cric_ddmendpoints.json
[2024-05-16 11:38:20] drwx------ 4 boinc boinc       4096 May 15 15:52 pilot3
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc        533 May 16 11:29 boinc_task_state.xml
[2024-05-16 11:38:20] -rw------- 1 boinc boinc 1174486196 May 16 11:37 HITS.38734053._003509.pool.root.1
[2024-05-16 11:38:20] -rw------- 1 boinc boinc         95 May 16 11:37 pilot_heartbeat.json
[2024-05-16 11:38:20] -rw------- 1 boinc boinc       1052 May 16 11:37 memory_monitor_summary.json
[2024-05-16 11:38:20] -rw------- 1 boinc boinc          0 May 16 11:37 agis_ddmendpoints.agis.ALL.json
[2024-05-16 11:38:20] -rw------- 1 boinc boinc    2062275 May 16 11:37 log.38734053._003509.job.log.tgz.1
[2024-05-16 11:38:20] -rw------- 1 boinc boinc      27362 May 16 11:38 heartbeat.json
[2024-05-16 11:38:20] -rw------- 1 boinc boinc       4222 May 16 11:38 pilotlog.txt
[2024-05-16 11:38:20] -rw------- 1 boinc boinc   12176801 May 16 11:38 log.38734053._003509.job.log.1
[2024-05-16 11:38:20] -rw------- 1 boinc boinc        353 May 16 11:38 output.list
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc        620 May 16 11:38 runtime_log
[2024-05-16 11:38:20] -rw------- 1 boinc boinc   14274560 May 16 11:38 result.tar.gz
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc      11410 May 16 11:38 runtime_log.err
[2024-05-16 11:38:20] -rw------- 1 boinc boinc        666 May 16 11:38 1ZQKDmQbEP5nsSi4apGgGQJmABFKDmABFKDm4ySLDmTjIKDmGiScYm.diag
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc       8192 May 16 11:38 boinc_mmap_file
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc         29 May 16 11:38 wrapper_checkpoint.txt
[2024-05-16 11:38:20] -rw-r--r-- 1 boinc boinc      21708 May 16 11:38 stderr.txt
[2024-05-16 11:38:20] HITS file was successfully produced:
[2024-05-16 11:38:20] -rw------- 1 boinc boinc 1174486196 May 16 11:37 shared/HITS.pool.root.1
[2024-05-16 11:38:20]  *** Contents of shared directory: ***
[2024-05-16 11:38:20] total 1480468
[2024-05-16 11:38:20] -rw-r--r-- 2 boinc boinc  326725574 May 15 15:52 ATLAS.root_0
[2024-05-16 11:38:20] -rw-r--r-- 2 boinc boinc      17537 May 15 15:52 start_atlas.sh
[2024-05-16 11:38:20] -rw-r--r-- 2 boinc boinc     480161 May 15 15:52 input.tar.gz
[2024-05-16 11:38:20] -rw------- 1 boinc boinc 1174486196 May 16 11:37 HITS.pool.root.1
[2024-05-16 11:38:20] -rw------- 1 boinc boinc   14274560 May 16 11:38 result.tar.gz
11:38:21 (2020899): run_atlas exited; CPU time 275590.971878
11:38:21 (2020899): called boinc_finish(0)

</stderr_txt>
]]>

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