Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:43:54 (2438948): wrapper (7.7.26015): starting
11:43:54 (2438948): wrapper: running run_atlas (--nthreads 4)
[2024-05-09 11:43:54] Arguments: --nthreads 4
[2024-05-09 11:43:54] Threads: 4
[2024-05-09 11:43:54] Checking for CVMFS
[2024-05-09 11:43:54] No cvmfs_config command found, will try listing directly
[2024-05-09 11:43:54] CVMFS is ok
[2024-05-09 11:43:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-09 11:43:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-09 11:43:54] Further information can be found at the LHC@home message board.
[2024-05-09 11:43:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-09 11:43:54] Checking for apptainer binary...
[2024-05-09 11:43:54] which: no apptainer in ((null))
[2024-05-09 11:43:54] apptainer is not installed, using version from CVMFS
[2024-05-09 11:43:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-09 11:43:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2024-05-09 11:43:55] apptainer works
[2024-05-09 11:43:55] Set ATHENA_PROC_NUMBER=4
[2024-05-09 11:43:55] Set ATHENA_CORE_NUMBER=4
[2024-05-09 11:43:55] Starting ATLAS job with PandaID=6192317011
[2024-05-09 11:43:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-09 14:49:22]  *** The last 200 lines of the pilot log: ***
[2024-05-09 14:49:22]  ddm_activity=['write_lan', 'write_wan']
[2024-05-09 14:49:22]  ddmendpoint=NDGF-T1_DATADISK
[2024-05-09 14:49:22]  direct_access_lan=False
[2024-05-09 14:49:22]  direct_access_wan=False
[2024-05-09 14:49:22]  domain=
[2024-05-09 14:49:22]  filesize=312528
[2024-05-09 14:49:22]  filetype=log
[2024-05-09 14:49:22]  guid=a5ca23ea-df60-4514-8770-612ba2c631df
[2024-05-09 14:49:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-09 14:49:22]  is_tar=False
[2024-05-09 14:49:22]  lfn=log.38207243._012369.job.log.tgz.1
[2024-05-09 14:49:22]  mtime=0
[2024-05-09 14:49:22]  protocol_id=None
[2024-05-09 14:49:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-09 14:49:22]  replicas=None
[2024-05-09 14:49:22]  scope=mc23_13p6TeV
[2024-05-09 14:49:22]  status=None
[2024-05-09 14:49:22]  status_code=0
[2024-05-09 14:49:22]  storage_token=
[2024-05-09 14:49:22]  surl=/scratch/boinc/var/slot36/slots/1/PanDA_Pilot-6192317011/log.38207243._012369.job.log.tgz.1
[2024-05-09 14:49:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/07/log.38207243._012369.job.log.tgz.1
[2024-05-09 14:49:22]  workdir=None
[2024-05-09 14:49:22] ]
[2024-05-09 14:49:22] 2024-05-09 12:49:05,005 | INFO     | transferring file log.38207243._012369.job.log.tgz.1 from /scratch/boinc/var/slot36/slots/1/PanDA_Pilot-6192317011/log.38207243._012369.job.log.tgz.1 to /scratch/b
[2024-05-09 14:49:22] 2024-05-09 12:49:05,006 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot36/slots/1/PanDA_Pilot-6192317011/log.38207243._012369.job.log.tgz.1 /scratch/boinc/var/slot36/slots/1/lo
[2024-05-09 14:49:22] 2024-05-09 12:49:05,018 | INFO     | adding to output.list: log.38207243._012369.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/07/log.38207243._012369.job.log.tg
[2024-05-09 14:49:22] 2024-05-09 12:49:05,018 | INFO     | summary of transferred files:
[2024-05-09 14:49:22] 2024-05-09 12:49:05,018 | INFO     |  -- lfn=log.38207243._012369.job.log.tgz.1, status_code=0, status=transferred
[2024-05-09 14:49:22] 2024-05-09 12:49:05,019 | INFO     | stage-out finished correctly
[2024-05-09 14:49:22] 2024-05-09 12:49:05,752 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-09 14:49:22] 2024-05-09 12:49:05,810 | INFO     | job 6192317011 has state=finished
[2024-05-09 14:49:22] 2024-05-09 12:49:05,811 | INFO     | preparing for final server update for job 6192317011 in state='finished'
[2024-05-09 14:49:22] 2024-05-09 12:49:05,811 | INFO     | this job has now completed (state=finished)
[2024-05-09 14:49:22] 2024-05-09 12:49:05,811 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-09 14:49:22] 2024-05-09 12:49:05,812 | INFO     | job 6192317011 has finished - writing final server update
[2024-05-09 14:49:22] 2024-05-09 12:49:05,812 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_18290/.job.ad'
[2024-05-09 14:49:22] 2024-05-09 12:49:05,812 | INFO     | total number of processed events: 400 (read)
[2024-05-09 14:49:22] 2024-05-09 12:49:05,813 | INFO     | executing command: lscpu
[2024-05-09 14:49:22] 2024-05-09 12:49:05,845 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-05-09 14:49:22] 2024-05-09 12:49:05,845 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-09 14:49:22] 2024-05-09 12:49:05,869 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-09 14:49:22] 2024-05-09 12:49:06,065 | INFO     | monitor loop #867: job 0:6192317011 is in state 'finished'
[2024-05-09 14:49:22] 2024-05-09 12:49:06,065 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,489 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-09 14:49:22] 2024-05-09 12:49:08,490 | INFO     | using path: /scratch/boinc/var/slot36/slots/1/PanDA_Pilot-6192317011/memory_monitor_summary.json (trf name=prmon)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,491 | INFO     | extracted standard info from prmon json
[2024-05-09 14:49:22] 2024-05-09 12:49:08,491 | INFO     | extracted standard memory fields from prmon json
[2024-05-09 14:49:22] 2024-05-09 12:49:08,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-09 14:49:22] 2024-05-09 12:49:08,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-09 14:49:22] 2024-05-09 12:49:08,493 | INFO     | fitting pss+swap vs Time
[2024-05-09 14:49:22] 2024-05-09 12:49:08,495 | INFO     | current chi2=4.142058499121568 (change=0.08070215741959594 %)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,495 | INFO     | right removable region: 176
[2024-05-09 14:49:22] 2024-05-09 12:49:08,496 | INFO     | current chi2=1.6209589758299674 (change=60.897442001143254 %)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,496 | INFO     | current chi2=0.09075962919508661 (change=94.40086821761695 %)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,497 | INFO     | current chi2=0.001599482291288871 (change=98.2376720735044 %)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,498 | INFO     | current chi2=0.0003382220718693819 (change=78.85427843050135 %)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,498 | INFO     | current chi2=0.000331169871028976 (change=2.0850800190028367 %)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,498 | INFO     | left removable region: 50
[2024-05-09 14:49:22] 2024-05-09 12:49:08,499 | INFO     | current memory leak: 3.74 B/s (using 126 data points, chi2=0.00)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,499 | INFO     | ..............................
[2024-05-09 14:49:22] 2024-05-09 12:49:08,499 | INFO     | . Timing measurements:
[2024-05-09 14:49:22] 2024-05-09 12:49:08,499 | INFO     | . get job = 0 s
[2024-05-09 14:49:22] 2024-05-09 12:49:08,500 | INFO     | . initial setup = 1 s
[2024-05-09 14:49:22] 2024-05-09 12:49:08,500 | INFO     | . payload setup = 3 s
[2024-05-09 14:49:22] 2024-05-09 12:49:08,500 | INFO     | . stage-in = 0 s
[2024-05-09 14:49:22] 2024-05-09 12:49:08,500 | INFO     | . payload execution = 11084 s
[2024-05-09 14:49:22] 2024-05-09 12:49:08,500 | INFO     | . stage-out = 0 s
[2024-05-09 14:49:22] 2024-05-09 12:49:08,500 | INFO     | . log creation = 0 s
[2024-05-09 14:49:22] 2024-05-09 12:49:08,500 | INFO     | ..............................
[2024-05-09 14:49:22] 2024-05-09 12:49:08,555 | INFO     | 
[2024-05-09 14:49:22] 2024-05-09 12:49:08,556 | INFO     | job summary report
[2024-05-09 14:49:22] 2024-05-09 12:49:08,556 | INFO     | --------------------------------------------------
[2024-05-09 14:49:22] 2024-05-09 12:49:08,556 | INFO     | PanDA job id: 6192317011
[2024-05-09 14:49:22] 2024-05-09 12:49:08,556 | INFO     | task id: 38207243
[2024-05-09 14:49:22] 2024-05-09 12:49:08,556 | INFO     | errors: (none)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,556 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-09 14:49:22] 2024-05-09 12:49:08,556 | INFO     | pilot state: finished 
[2024-05-09 14:49:22] 2024-05-09 12:49:08,557 | INFO     | transexitcode: 0
[2024-05-09 14:49:22] 2024-05-09 12:49:08,557 | INFO     | exeerrorcode: 0
[2024-05-09 14:49:22] 2024-05-09 12:49:08,557 | INFO     | exeerrordiag: 
[2024-05-09 14:49:22] 2024-05-09 12:49:08,557 | INFO     | exitcode: 0
[2024-05-09 14:49:22] 2024-05-09 12:49:08,557 | INFO     | exitmsg: OK
[2024-05-09 14:49:22] 2024-05-09 12:49:08,557 | INFO     | cpuconsumptiontime: 41402 s
[2024-05-09 14:49:22] 2024-05-09 12:49:08,557 | INFO     | nevents: 400
[2024-05-09 14:49:22] 2024-05-09 12:49:08,557 | INFO     | neventsw: 0
[2024-05-09 14:49:22] 2024-05-09 12:49:08,558 | INFO     | pid: 2450084
[2024-05-09 14:49:22] 2024-05-09 12:49:08,558 | INFO     | pgrp: 2450084
[2024-05-09 14:49:22] 2024-05-09 12:49:08,558 | INFO     | corecount: 4
[2024-05-09 14:49:22] 2024-05-09 12:49:08,558 | INFO     | event service: False
[2024-05-09 14:49:22] 2024-05-09 12:49:08,558 | INFO     | sizes: {0: 2379952, 1: 2380887, 4: 2381093, 11: 2381121, 11088: 2410278, 11089: 2419443, 11090: 2419443, 11093: 2419613}
[2024-05-09 14:49:22] 2024-05-09 12:49:08,558 | INFO     | --------------------------------------------------
[2024-05-09 14:49:22] 2024-05-09 12:49:08,558 | INFO     | 
[2024-05-09 14:49:22] 2024-05-09 12:49:08,558 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-05-09 14:49:22] 2024-05-09 12:49:08,574 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,575 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,575 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,575 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,575 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,575 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,575 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,576 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,576 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,576 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,576 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,576 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,576 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,577 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,577 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-09 14:49:22] 2024-05-09 12:49:08,577 | INFO     | job 6192317011 has completed (purged errors)
[2024-05-09 14:49:22] 2024-05-09 12:49:08,578 | INFO     | overall cleanup function is called
[2024-05-09 14:49:22] 2024-05-09 12:49:09,585 | INFO     | --- collectZombieJob: --- 10, [2450084]
[2024-05-09 14:49:22] 2024-05-09 12:49:09,585 | INFO     | zombie collector waiting for pid 2450084
[2024-05-09 14:49:22] 2024-05-09 12:49:09,586 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-09 14:49:22] 2024-05-09 12:49:10,587 | INFO     | collected zombie processes
[2024-05-09 14:49:22] 2024-05-09 12:49:10,588 | INFO     | will now attempt to kill all subprocesses of pid=2450084
[2024-05-09 14:49:22] 2024-05-09 12:49:10,673 | INFO     | process IDs to be killed: [2450084] (in reverse order)
[2024-05-09 14:49:22] 2024-05-09 12:49:10,739 | WARNING  | found no corresponding commands to process id(s)
[2024-05-09 14:49:22] 2024-05-09 12:49:10,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-09 14:49:22] 2024-05-09 12:49:10,743 | INFO     | did not find any defunct processes belonging to 2450084
[2024-05-09 14:49:22] 2024-05-09 12:49:10,746 | INFO     | did not find any defunct processes belonging to 2450084
[2024-05-09 14:49:22] 2024-05-09 12:49:10,746 | INFO     | ready for new job
[2024-05-09 14:49:22] 2024-05-09 12:49:10,746 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-09 14:49:22] 2024-05-09 12:49:10,747 | INFO     | *************************************
[2024-05-09 14:49:22] 2024-05-09 12:49:10,747 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-05-09 14:49:22] 2024-05-09 12:49:10,747 | INFO     | *************************************
[2024-05-09 14:49:22] 2024-05-09 12:49:10,748 | INFO     | 
[2024-05-09 14:49:22] 2024-05-09 12:49:10,749 | INFO     | architecture information:
[2024-05-09 14:49:22] 2024-05-09 12:49:10,749 | INFO     | executing command: cat /etc/os-release
[2024-05-09 14:49:22] 2024-05-09 12:49:10,759 | INFO     | cat /etc/os-release:
[2024-05-09 14:49:22] NAME="CentOS Linux"
[2024-05-09 14:49:22] VERSION="7 (Core)"
[2024-05-09 14:49:22] ID="centos"
[2024-05-09 14:49:22] ID_LIKE="rhel fedora"
[2024-05-09 14:49:22] VERSION_ID="7"
[2024-05-09 14:49:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-09 14:49:22] ANSI_COLOR="0;31"
[2024-05-09 14:49:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-09 14:49:22] HOME_URL="https://www.centos.org/"
[2024-05-09 14:49:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-09 14:49:22] 
[2024-05-09 14:49:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-09 14:49:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-09 14:49:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-09 14:49:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-09 14:49:22] 
[2024-05-09 14:49:22] 2024-05-09 12:49:10,759 | INFO     | *************************************
[2024-05-09 14:49:22] 2024-05-09 12:49:11,262 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-05-09 14:49:22] 2024-05-09 12:49:11,278 | INFO     | sufficient remaining disk space (1667849256960 B)
[2024-05-09 14:49:22] 2024-05-09 12:49:11,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-09 14:49:22] 2024-05-09 12:49:11,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-09 14:49:22] 2024-05-09 12:49:11,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-09 14:49:22] 2024-05-09 12:49:11,366 | INFO     | all payload control threads have been joined
[2024-05-09 14:49:22] 2024-05-09 12:49:11,395 | INFO     | all job control threads have been joined
[2024-05-09 14:49:22] 2024-05-09 12:49:11,671 | INFO     | job.realtimelogging is not enabled
[2024-05-09 14:49:22] 2024-05-09 12:49:11,736 | INFO     | all data control threads have been joined
[2024-05-09 14:49:22] 2024-05-09 12:49:11,815 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-09 14:49:22] 2024-05-09 12:49:11,949 | INFO     | found 0 job(s) in 20 queues
[2024-05-09 14:49:22] 2024-05-09 12:49:11,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-09 14:49:22] 2024-05-09 12:49:11,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-09 14:49:22] 2024-05-09 12:49:12,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-09 14:49:22] 2024-05-09 12:49:12,076 | INFO     | aborting loop
[2024-05-09 14:49:22] 2024-05-09 12:49:12,284 | INFO     | [job] retrieve thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:12,371 | INFO     | [payload] control thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:12,400 | INFO     | [job] control thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:12,647 | INFO     | [payload] execute_payloads thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:12,655 | INFO     | [job] validate thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:12,676 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:12,740 | INFO     | [data] control thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:12,767 | INFO     | [payload] failed_post thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:12,943 | INFO     | [data] copytool_in thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:12,944 | INFO     | [job] create_data_payload thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:13,006 | INFO     | [payload] validate_pre thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:13,081 | INFO     | [job] job monitor thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:13,284 | INFO     | [data] copytool_out thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:13,318 | INFO     | [payload] validate_post thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:13,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-09 14:49:22] 2024-05-09 12:49:14,571 | INFO     | [job] queue monitor thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:15,821 | INFO     | [data] queue_monitor thread has finished
[2024-05-09 14:49:22] 2024-05-09 12:49:17,031 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47633551184960)>', '<ExcThread(monitor, started 47633726621440)>']
[2024-05-09 14:49:22] 2024-05-09 12:49:17,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-09 14:49:22] 2024-05-09 12:49:17,972 | INFO     | [monitor] control thread has ended
[2024-05-09 14:49:22] 2024-05-09 12:49:22,045 | INFO     | all workflow threads have been joined
[2024-05-09 14:49:22] 2024-05-09 12:49:22,045 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-09 14:49:22] 2024-05-09 12:49:22,046 | INFO     | traces error code: 0
[2024-05-09 14:49:22] 2024-05-09 12:49:22,046 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-09 14:49:22] 2024-05-09 12:49:22,111 [wrapper] ==== pilot stdout END ====
[2024-05-09 14:49:22] 2024-05-09 12:49:22,113 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-09 14:49:22] 2024-05-09 12:49:22,115 [wrapper] pilotpid: 2443173
[2024-05-09 14:49:22] 2024-05-09 12:49:22,118 [wrapper] Pilot exit status: 0
[2024-05-09 14:49:22] 2024-05-09 12:49:22,134 [wrapper] pandaids: 6192317011
[2024-05-09 14:49:22] 2024-05-09 12:49:22,188 [wrapper] cleanup: SIGTERM to supervisor_pilot 2713512 2443174
[2024-05-09 14:49:22] 2024-05-09 12:49:22,191 [wrapper] Test setup, not cleaning
[2024-05-09 14:49:22] 2024-05-09 12:49:22,193 [wrapper] ==== wrapper stdout END ====
[2024-05-09 14:49:22] 2024-05-09 12:49:22,196 [wrapper] ==== wrapper stderr END ====
[2024-05-09 14:49:22] 2024-05-09 12:49:22,200 [wrapper] apfmon messages muted
[2024-05-09 14:49:22]  *** Error codes and diagnostics ***
[2024-05-09 14:49:22]     "exeErrorCode": 0,
[2024-05-09 14:49:22]     "exeErrorDiag": "",
[2024-05-09 14:49:22]     "pilotErrorCode": 0,
[2024-05-09 14:49:22]     "pilotErrorDiag": "",
[2024-05-09 14:49:22]  *** Listing of results directory ***
[2024-05-09 14:49:22] total 706828
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc    462745 May  1 02:24 pilot3.tar.gz
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc      6173 May  1 03:18 queuedata.json
[2024-05-09 14:49:22] -rwx------ 1 boinc boinc     32211 May  1 03:18 runpilot2-wrapper.sh
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc       100 May  9 10:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-09 14:49:22] -rwxr-xr-x 1 boinc boinc      7986 May  9 10:43 run_atlas
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc       105 May  9 10:43 job.xml
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc      6455 May  9 11:43 init_data.xml
[2024-05-09 14:49:22] -rw-r--r-- 2 boinc boinc 519924036 May  9 11:43 EVNT.38207241._000387.pool.root.1
[2024-05-09 14:49:22] -rw-r--r-- 2 boinc boinc     17537 May  9 11:43 start_atlas.sh
[2024-05-09 14:49:22] drwxrwx--x 2 boinc boinc      4096 May  9 11:43 shared
[2024-05-09 14:49:22] -rw-r--r-- 2 boinc boinc    474797 May  9 11:43 input.tar.gz
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc         0 May  9 11:43 boinc_lockfile
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc      2617 May  9 11:43 pandaJob.out
[2024-05-09 14:49:22] -rw------- 1 boinc boinc       424 May  9 11:43 setup.sh.local
[2024-05-09 14:49:22] -rw------- 1 boinc boinc   1001888 May  9 11:44 agis_schedconf.cvmfs.json
[2024-05-09 14:49:22] -rw------- 1 boinc boinc   1317658 May  9 11:44 cric_ddmendpoints.json
[2024-05-09 14:49:22] drwx------ 4 boinc boinc      4096 May  9 11:44 pilot3
[2024-05-09 14:49:22] -rw------- 1 boinc boinc        95 May  9 14:48 pilot_heartbeat.json
[2024-05-09 14:49:22] -rw------- 1 boinc boinc 197600638 May  9 14:48 HITS.38207243._012369.pool.root.1
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc       531 May  9 14:48 boinc_task_state.xml
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc      8192 May  9 14:48 boinc_mmap_file
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc        28 May  9 14:48 wrapper_checkpoint.txt
[2024-05-09 14:49:22] -rw------- 1 boinc boinc      1059 May  9 14:49 memory_monitor_summary.json
[2024-05-09 14:49:22] -rw------- 1 boinc boinc         0 May  9 14:49 agis_ddmendpoints.agis.ALL.json
[2024-05-09 14:49:22] -rw------- 1 boinc boinc    312528 May  9 14:49 log.38207243._012369.job.log.tgz.1
[2024-05-09 14:49:22] -rw------- 1 boinc boinc      7733 May  9 14:49 heartbeat.json
[2024-05-09 14:49:22] -rw------- 1 boinc boinc      4294 May  9 14:49 pilotlog.txt
[2024-05-09 14:49:22] -rw------- 1 boinc boinc   1073380 May  9 14:49 log.38207243._012369.job.log.1
[2024-05-09 14:49:22] -rw------- 1 boinc boinc       357 May  9 14:49 output.list
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc       620 May  9 14:49 runtime_log
[2024-05-09 14:49:22] -rw------- 1 boinc boinc   1402880 May  9 14:49 result.tar.gz
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc     11410 May  9 14:49 runtime_log.err
[2024-05-09 14:49:22] -rw------- 1 boinc boinc       653 May  9 14:49 r2vMDmfnDM5nfZGDcpSWOuwoABFKDmABFKDmtxRSDmMDQKDmVnRZLm.diag
[2024-05-09 14:49:22] -rw-r--r-- 1 boinc boinc     20902 May  9 14:49 stderr.txt
[2024-05-09 14:49:22] HITS file was successfully produced:
[2024-05-09 14:49:22] -rw------- 1 boinc boinc 197600638 May  9 14:48 shared/HITS.pool.root.1
[2024-05-09 14:49:22]  *** Contents of shared directory: ***
[2024-05-09 14:49:22] total 702576
[2024-05-09 14:49:22] -rw-r--r-- 2 boinc boinc 519924036 May  9 11:43 ATLAS.root_0
[2024-05-09 14:49:22] -rw-r--r-- 2 boinc boinc     17537 May  9 11:43 start_atlas.sh
[2024-05-09 14:49:22] -rw-r--r-- 2 boinc boinc    474797 May  9 11:43 input.tar.gz
[2024-05-09 14:49:22] -rw------- 1 boinc boinc 197600638 May  9 14:48 HITS.pool.root.1
[2024-05-09 14:49:22] -rw------- 1 boinc boinc   1402880 May  9 14:49 result.tar.gz
14:49:24 (2438948): run_atlas exited; CPU time 41266.998535
14:49:24 (2438948): called boinc_finish(0)

</stderr_txt>
]]>

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