Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:51:05 (2460035): wrapper (7.7.26015): starting
11:51:05 (2460035): wrapper: running run_atlas (--nthreads 4)
[2024-05-09 11:51:05] Arguments: --nthreads 4
[2024-05-09 11:51:05] Threads: 4
[2024-05-09 11:51:05] Checking for CVMFS
[2024-05-09 11:51:05] No cvmfs_config command found, will try listing directly
[2024-05-09 11:51:05] CVMFS is ok
[2024-05-09 11:51:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-09 11:51:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-09 11:51:05] Further information can be found at the LHC@home message board.
[2024-05-09 11:51:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-09 11:51:05] Checking for apptainer binary...
[2024-05-09 11:51:05] which: no apptainer in ((null))
[2024-05-09 11:51:05] apptainer is not installed, using version from CVMFS
[2024-05-09 11:51:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-09 11:51:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2024-05-09 11:51:06] apptainer works
[2024-05-09 11:51:06] Set ATHENA_PROC_NUMBER=4
[2024-05-09 11:51:06] Set ATHENA_CORE_NUMBER=4
[2024-05-09 11:51:06] Starting ATLAS job with PandaID=6192339436
[2024-05-09 11:51:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-09 14:05:10]  *** The last 200 lines of the pilot log: ***
[2024-05-09 14:05:10]  is_tar=False
[2024-05-09 14:05:10]  lfn=log.38204375._012951.job.log.tgz.1
[2024-05-09 14:05:10]  mtime=0
[2024-05-09 14:05:10]  protocol_id=None
[2024-05-09 14:05:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-09 14:05:10]  replicas=None
[2024-05-09 14:05:10]  scope=mc23_13p6TeV
[2024-05-09 14:05:10]  status=None
[2024-05-09 14:05:10]  status_code=0
[2024-05-09 14:05:10]  storage_token=
[2024-05-09 14:05:10]  surl=/scratch/boinc/var/slot48/slots/1/PanDA_Pilot-6192339436/log.38204375._012951.job.log.tgz.1
[2024-05-09 14:05:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/33/log.38204375._012951.job.log.tgz.1
[2024-05-09 14:05:10]  workdir=None
[2024-05-09 14:05:10] ]
[2024-05-09 14:05:10] 2024-05-09 12:04:39,358 | INFO     | transferring file log.38204375._012951.job.log.tgz.1 from /scratch/boinc/var/slot48/slots/1/PanDA_Pilot-6192339436/log.38204375._012951.job.log.tgz.1 to /scratch/b
[2024-05-09 14:05:10] 2024-05-09 12:04:39,358 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot48/slots/1/PanDA_Pilot-6192339436/log.38204375._012951.job.log.tgz.1 /scratch/boinc/var/slot48/slots/1/lo
[2024-05-09 14:05:10] 2024-05-09 12:04:39,370 | INFO     | monitor loop #623: job 0:6192339436 is in state 'stageout'
[2024-05-09 14:05:10] 2024-05-09 12:04:39,371 | WARNING  | aborting job monitor tasks since payload process 2478325 is not running
[2024-05-09 14:05:10] 2024-05-09 12:04:39,371 | INFO     | will not send any job update
[2024-05-09 14:05:10] 2024-05-09 12:04:39,376 | INFO     | adding to output.list: log.38204375._012951.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/33/log.38204375._012951.job.log.tg
[2024-05-09 14:05:10] 2024-05-09 12:04:39,377 | INFO     | summary of transferred files:
[2024-05-09 14:05:10] 2024-05-09 12:04:39,377 | INFO     |  -- lfn=log.38204375._012951.job.log.tgz.1, status_code=0, status=transferred
[2024-05-09 14:05:10] 2024-05-09 12:04:39,377 | INFO     | stage-out finished correctly
[2024-05-09 14:05:10] 2024-05-09 12:04:41,874 | INFO     | monitor loop #624: job 0:6192339436 is in state 'finished'
[2024-05-09 14:05:10] 2024-05-09 12:04:41,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-09 14:05:10] 2024-05-09 12:04:42,861 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-09 14:05:10] 2024-05-09 12:04:43,555 | INFO     | job 6192339436 has state=finished
[2024-05-09 14:05:10] 2024-05-09 12:04:43,555 | INFO     | preparing for final server update for job 6192339436 in state='finished'
[2024-05-09 14:05:10] 2024-05-09 12:04:43,556 | INFO     | this job has now completed (state=finished)
[2024-05-09 14:05:10] 2024-05-09 12:04:43,556 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-09 14:05:10] 2024-05-09 12:04:43,556 | INFO     | job 6192339436 has finished - writing final server update
[2024-05-09 14:05:10] 2024-05-09 12:04:43,556 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_18212/.job.ad'
[2024-05-09 14:05:10] 2024-05-09 12:04:43,556 | INFO     | total number of processed events: 400 (read)
[2024-05-09 14:05:10] 2024-05-09 12:04:43,560 | INFO     | executing command: lscpu
[2024-05-09 14:05:10] 2024-05-09 12:04:43,610 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-05-09 14:05:10] 2024-05-09 12:04:43,611 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-09 14:05:10] 2024-05-09 12:04:43,653 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-09 14:05:10] 2024-05-09 12:04:44,382 | INFO     | monitor loop #625: job 0:6192339436 is in state 'finished'
[2024-05-09 14:05:10] 2024-05-09 12:04:44,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-09 14:05:10] 2024-05-09 12:04:46,885 | INFO     | monitor loop #626: job 0:6192339436 is in state 'finished'
[2024-05-09 14:05:10] 2024-05-09 12:04:46,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,281 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-09 14:05:10] 2024-05-09 12:04:48,282 | INFO     | using path: /scratch/boinc/var/slot48/slots/1/PanDA_Pilot-6192339436/memory_monitor_summary.json (trf name=prmon)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,283 | INFO     | extracted standard info from prmon json
[2024-05-09 14:05:10] 2024-05-09 12:04:48,283 | INFO     | extracted standard memory fields from prmon json
[2024-05-09 14:05:10] 2024-05-09 12:04:48,284 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-09 14:05:10] 2024-05-09 12:04:48,284 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-09 14:05:10] 2024-05-09 12:04:48,286 | INFO     | fitting pss+swap vs Time
[2024-05-09 14:05:10] 2024-05-09 12:04:48,288 | INFO     | current chi2=4.026967599851829 (change=0.2319900815313765 %)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,288 | INFO     | right removable region: 125
[2024-05-09 14:05:10] 2024-05-09 12:04:48,289 | INFO     | current chi2=1.5345978376801808 (change=61.980381392646365 %)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,290 | INFO     | current chi2=0.05079012359803215 (change=96.69033004276805 %)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,291 | INFO     | current chi2=0.0012519938039210541 (change=97.53496602246985 %)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,291 | INFO     | current chi2=0.0007739636854931656 (change=38.181508321428666 %)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,292 | INFO     | current chi2=0.0007344236376931387 (change=5.108773000742555 %)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,292 | INFO     | left removable region: 50
[2024-05-09 14:05:10] 2024-05-09 12:04:48,293 | INFO     | current memory leak: 2.45 B/s (using 75 data points, chi2=0.00)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,293 | INFO     | ..............................
[2024-05-09 14:05:10] 2024-05-09 12:04:48,293 | INFO     | . Timing measurements:
[2024-05-09 14:05:10] 2024-05-09 12:04:48,293 | INFO     | . get job = 0 s
[2024-05-09 14:05:10] 2024-05-09 12:04:48,293 | INFO     | . initial setup = 1 s
[2024-05-09 14:05:10] 2024-05-09 12:04:48,293 | INFO     | . payload setup = 3 s
[2024-05-09 14:05:10] 2024-05-09 12:04:48,294 | INFO     | . stage-in = 0 s
[2024-05-09 14:05:10] 2024-05-09 12:04:48,294 | INFO     | . payload execution = 7982 s
[2024-05-09 14:05:10] 2024-05-09 12:04:48,294 | INFO     | . stage-out = 0 s
[2024-05-09 14:05:10] 2024-05-09 12:04:48,294 | INFO     | . log creation = 0 s
[2024-05-09 14:05:10] 2024-05-09 12:04:48,294 | INFO     | ..............................
[2024-05-09 14:05:10] 2024-05-09 12:04:48,673 | INFO     | 
[2024-05-09 14:05:10] 2024-05-09 12:04:48,673 | INFO     | job summary report
[2024-05-09 14:05:10] 2024-05-09 12:04:48,673 | INFO     | --------------------------------------------------
[2024-05-09 14:05:10] 2024-05-09 12:04:48,673 | INFO     | PanDA job id: 6192339436
[2024-05-09 14:05:10] 2024-05-09 12:04:48,673 | INFO     | task id: 38204375
[2024-05-09 14:05:10] 2024-05-09 12:04:48,673 | INFO     | errors: (none)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | pilot state: finished 
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | transexitcode: 0
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | exeerrorcode: 0
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | exeerrordiag: 
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | exitcode: 0
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | exitmsg: OK
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | cpuconsumptiontime: 29193 s
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | nevents: 400
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | neventsw: 0
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | pid: 2478325
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | pgrp: 2478325
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | corecount: 4
[2024-05-09 14:05:10] 2024-05-09 12:04:48,674 | INFO     | event service: False
[2024-05-09 14:05:10] 2024-05-09 12:04:48,675 | INFO     | sizes: {0: 2380769, 1: 2380883, 4: 2381117, 11: 2381145, 7989: 2408866, 7991: 2417848, 7995: 2418032, 8000: 2418202}
[2024-05-09 14:05:10] 2024-05-09 12:04:48,675 | INFO     | --------------------------------------------------
[2024-05-09 14:05:10] 2024-05-09 12:04:48,675 | INFO     | 
[2024-05-09 14:05:10] 2024-05-09 12:04:48,675 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/1
[2024-05-09 14:05:10] 2024-05-09 12:04:48,695 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,695 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,696 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,697 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-09 14:05:10] 2024-05-09 12:04:48,697 | INFO     | job 6192339436 has completed (purged errors)
[2024-05-09 14:05:10] 2024-05-09 12:04:48,697 | INFO     | overall cleanup function is called
[2024-05-09 14:05:10] 2024-05-09 12:04:49,704 | INFO     | --- collectZombieJob: --- 10, [2478325]
[2024-05-09 14:05:10] 2024-05-09 12:04:49,704 | INFO     | zombie collector waiting for pid 2478325
[2024-05-09 14:05:10] 2024-05-09 12:04:49,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-09 14:05:10] 2024-05-09 12:04:50,709 | INFO     | collected zombie processes
[2024-05-09 14:05:10] 2024-05-09 12:04:50,710 | INFO     | will now attempt to kill all subprocesses of pid=2478325
[2024-05-09 14:05:10] 2024-05-09 12:04:50,864 | INFO     | process IDs to be killed: [2478325] (in reverse order)
[2024-05-09 14:05:10] 2024-05-09 12:04:50,946 | WARNING  | found no corresponding commands to process id(s)
[2024-05-09 14:05:10] 2024-05-09 12:04:50,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-09 14:05:10] 2024-05-09 12:04:50,953 | INFO     | did not find any defunct processes belonging to 2478325
[2024-05-09 14:05:10] 2024-05-09 12:04:50,958 | INFO     | did not find any defunct processes belonging to 2478325
[2024-05-09 14:05:10] 2024-05-09 12:04:50,958 | INFO     | ready for new job
[2024-05-09 14:05:10] 2024-05-09 12:04:50,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-09 14:05:10] 2024-05-09 12:04:50,959 | INFO     | *************************************
[2024-05-09 14:05:10] 2024-05-09 12:04:50,959 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-05-09 14:05:10] 2024-05-09 12:04:50,959 | INFO     | *************************************
[2024-05-09 14:05:10] 2024-05-09 12:04:50,959 | INFO     | 
[2024-05-09 14:05:10] 2024-05-09 12:04:50,962 | INFO     | architecture information:
[2024-05-09 14:05:10] 2024-05-09 12:04:50,962 | INFO     | executing command: cat /etc/os-release
[2024-05-09 14:05:10] 2024-05-09 12:04:50,975 | INFO     | cat /etc/os-release:
[2024-05-09 14:05:10] NAME="CentOS Linux"
[2024-05-09 14:05:10] VERSION="7 (Core)"
[2024-05-09 14:05:10] ID="centos"
[2024-05-09 14:05:10] ID_LIKE="rhel fedora"
[2024-05-09 14:05:10] VERSION_ID="7"
[2024-05-09 14:05:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-09 14:05:10] ANSI_COLOR="0;31"
[2024-05-09 14:05:10] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-09 14:05:10] HOME_URL="https://www.centos.org/"
[2024-05-09 14:05:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-09 14:05:10] 
[2024-05-09 14:05:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-09 14:05:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-09 14:05:10] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-09 14:05:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-09 14:05:10] 
[2024-05-09 14:05:10] 2024-05-09 12:04:50,975 | INFO     | *************************************
[2024-05-09 14:05:10] 2024-05-09 12:04:51,478 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/1
[2024-05-09 14:05:10] 2024-05-09 12:04:51,497 | INFO     | sufficient remaining disk space (674098053120 B)
[2024-05-09 14:05:10] 2024-05-09 12:04:51,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-09 14:05:10] 2024-05-09 12:04:51,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-09 14:05:10] 2024-05-09 12:04:51,833 | INFO     | all data control threads have been joined
[2024-05-09 14:05:10] 2024-05-09 12:04:51,894 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-09 14:05:10] 2024-05-09 12:04:51,894 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-09 14:05:10] 2024-05-09 12:04:51,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-09 14:05:10] 2024-05-09 12:04:51,894 | INFO     | will abort loop
[2024-05-09 14:05:10] 2024-05-09 12:04:52,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-09 14:05:10] 2024-05-09 12:04:52,476 | INFO     | all payload control threads have been joined
[2024-05-09 14:05:10] 2024-05-09 12:04:52,497 | INFO     | found 0 job(s) in 20 queues
[2024-05-09 14:05:10] 2024-05-09 12:04:52,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-09 14:05:10] 2024-05-09 12:04:52,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-09 14:05:10] 2024-05-09 12:04:52,500 | INFO     | [job] retrieve thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:52,776 | INFO     | [job] create_data_payload thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:52,825 | INFO     | [job] validate thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:52,838 | INFO     | [data] control thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:52,844 | INFO     | [payload] validate_post thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:52,895 | INFO     | [job] job monitor thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:52,978 | INFO     | [payload] validate_pre thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:53,016 | INFO     | [data] copytool_in thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:53,204 | INFO     | all job control threads have been joined
[2024-05-09 14:05:10] 2024-05-09 12:04:53,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-09 14:05:10] 2024-05-09 12:04:53,387 | INFO     | [payload] execute_payloads thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:53,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-09 14:05:10] 2024-05-09 12:04:53,478 | INFO     | [payload] control thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:53,588 | INFO     | [payload] failed_post thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:54,209 | INFO     | [job] control thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:54,358 | INFO     | [job] queue monitor thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:54,464 | INFO     | [data] copytool_out thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:04:57,437 | INFO     | [data] queue_monitor thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:05:01,919 | INFO     | job.realtimelogging is not enabled
[2024-05-09 14:05:10] 2024-05-09 12:05:02,923 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-09 14:05:10] 2024-05-09 12:05:04,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47208477783104)>', '<ExcThread(monitor, started 47208657422080)>']
[2024-05-09 14:05:10] 2024-05-09 12:05:04,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-09 14:05:10] 2024-05-09 12:05:04,543 | INFO     | [monitor] control thread has ended
[2024-05-09 14:05:10] 2024-05-09 12:05:09,515 | INFO     | all workflow threads have been joined
[2024-05-09 14:05:10] 2024-05-09 12:05:09,516 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-09 14:05:10] 2024-05-09 12:05:09,516 | INFO     | traces error code: 0
[2024-05-09 14:05:10] 2024-05-09 12:05:09,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-09 14:05:10] 2024-05-09 12:05:09,594 [wrapper] ==== pilot stdout END ====
[2024-05-09 14:05:10] 2024-05-09 12:05:09,597 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-09 14:05:10] 2024-05-09 12:05:09,598 [wrapper] pilotpid: 2471280
[2024-05-09 14:05:10] 2024-05-09 12:05:09,600 [wrapper] Pilot exit status: 0
[2024-05-09 14:05:10] 2024-05-09 12:05:09,608 [wrapper] pandaids: 6192339436
[2024-05-09 14:05:10] 2024-05-09 12:05:09,661 [wrapper] cleanup: SIGTERM to supervisor_pilot 2707233 2471281
[2024-05-09 14:05:10] 2024-05-09 12:05:09,664 [wrapper] Test setup, not cleaning
[2024-05-09 14:05:10] 2024-05-09 12:05:09,666 [wrapper] ==== wrapper stdout END ====
[2024-05-09 14:05:10] 2024-05-09 12:05:09,667 [wrapper] ==== wrapper stderr END ====
[2024-05-09 14:05:10] 2024-05-09 12:05:09,671 [wrapper] apfmon messages muted
[2024-05-09 14:05:10]  *** Error codes and diagnostics ***
[2024-05-09 14:05:10]     "exeErrorCode": 0,
[2024-05-09 14:05:10]     "exeErrorDiag": "",
[2024-05-09 14:05:10]     "pilotErrorCode": 0,
[2024-05-09 14:05:10]     "pilotErrorDiag": "",
[2024-05-09 14:05:10]  *** Listing of results directory ***
[2024-05-09 14:05:10] total 614492
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc    462745 May  1 03:25 pilot3.tar.gz
[2024-05-09 14:05:10] -rwx------ 1 boinc boinc     32211 May  1 03:29 runpilot2-wrapper.sh
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc      6173 May  1 03:29 queuedata.json
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc       100 May  9 11:50 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-09 14:05:10] -rwxr-xr-x 1 boinc boinc      7986 May  9 11:50 run_atlas
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc       105 May  9 11:50 job.xml
[2024-05-09 14:05:10] -rw-r--r-- 2 boinc boinc    474772 May  9 11:51 input.tar.gz
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc      6661 May  9 11:51 init_data.xml
[2024-05-09 14:05:10] -rw-r--r-- 2 boinc boinc 451758262 May  9 11:51 EVNT.38204373._000455.pool.root.1
[2024-05-09 14:05:10] -rw-r--r-- 2 boinc boinc     17537 May  9 11:51 start_atlas.sh
[2024-05-09 14:05:10] drwxrwx--x 2 boinc boinc      4096 May  9 11:51 shared
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc         0 May  9 11:51 boinc_lockfile
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc      2587 May  9 11:51 pandaJob.out
[2024-05-09 14:05:10] -rw------- 1 boinc boinc       424 May  9 11:51 setup.sh.local
[2024-05-09 14:05:10] -rw------- 1 boinc boinc   1001888 May  9 11:51 agis_schedconf.cvmfs.json
[2024-05-09 14:05:10] -rw------- 1 boinc boinc         0 May  9 11:51 agis_ddmendpoints.agis.ALL.json
[2024-05-09 14:05:10] -rw------- 1 boinc boinc   1317658 May  9 11:51 cric_ddmendpoints.json
[2024-05-09 14:05:10] drwx------ 4 boinc boinc      4096 May  9 11:51 pilot3
[2024-05-09 14:05:10] -rw------- 1 boinc boinc 171835860 May  9 14:04 HITS.38204375._012951.pool.root.1
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc       530 May  9 14:04 boinc_task_state.xml
[2024-05-09 14:05:10] -rw------- 1 boinc boinc      1044 May  9 14:04 memory_monitor_summary.json
[2024-05-09 14:05:10] -rw------- 1 boinc boinc        95 May  9 14:04 pilot_heartbeat.json
[2024-05-09 14:05:10] -rw------- 1 boinc boinc    288776 May  9 14:04 log.38204375._012951.job.log.tgz.1
[2024-05-09 14:05:10] -rw------- 1 boinc boinc      7725 May  9 14:04 heartbeat.json
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc      8192 May  9 14:04 boinc_mmap_file
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc        27 May  9 14:04 wrapper_checkpoint.txt
[2024-05-09 14:05:10] -rw------- 1 boinc boinc      4479 May  9 14:05 pilotlog.txt
[2024-05-09 14:05:10] -rw------- 1 boinc boinc    784744 May  9 14:05 log.38204375._012951.job.log.1
[2024-05-09 14:05:10] -rw------- 1 boinc boinc       357 May  9 14:05 output.list
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc       620 May  9 14:05 runtime_log
[2024-05-09 14:05:10] -rw------- 1 boinc boinc   1095680 May  9 14:05 result.tar.gz
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc     11409 May  9 14:05 runtime_log.err
[2024-05-09 14:05:10] -rw------- 1 boinc boinc       650 May  9 14:05 RB5LDmUxDM5nfZGDcpSWOuwoABFKDmABFKDmtxRSDmhDQKDmTDPp3n.diag
[2024-05-09 14:05:10] -rw-r--r-- 1 boinc boinc     21522 May  9 14:05 stderr.txt
[2024-05-09 14:05:10] HITS file was successfully produced:
[2024-05-09 14:05:10] -rw------- 1 boinc boinc 171835860 May  9 14:04 shared/HITS.pool.root.1
[2024-05-09 14:05:10]  *** Contents of shared directory: ***
[2024-05-09 14:05:10] total 610548
[2024-05-09 14:05:10] -rw-r--r-- 2 boinc boinc    474772 May  9 11:51 input.tar.gz
[2024-05-09 14:05:10] -rw-r--r-- 2 boinc boinc 451758262 May  9 11:51 ATLAS.root_0
[2024-05-09 14:05:10] -rw-r--r-- 2 boinc boinc     17537 May  9 11:51 start_atlas.sh
[2024-05-09 14:05:10] -rw------- 1 boinc boinc 171835860 May  9 14:04 HITS.pool.root.1
[2024-05-09 14:05:10] -rw------- 1 boinc boinc   1095680 May  9 14:05 result.tar.gz
14:05:12 (2460035): run_atlas exited; CPU time 29062.145743
14:05:12 (2460035): called boinc_finish(0)

</stderr_txt>
]]>

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