Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:45:42 (1343943): wrapper (7.7.26015): starting
00:45:42 (1343943): wrapper: running run_atlas (--nthreads 4)
[2024-05-16 00:45:42] Arguments: --nthreads 4
[2024-05-16 00:45:42] Threads: 4
[2024-05-16 00:45:42] Checking for CVMFS
[2024-05-16 00:45:42] No cvmfs_config command found, will try listing directly
[2024-05-16 00:45:42] CVMFS is ok
[2024-05-16 00:45:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-16 00:45:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-16 00:45:42] Further information can be found at the LHC@home message board.
[2024-05-16 00:45:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-16 00:45:42] Checking for apptainer binary...
[2024-05-16 00:45:42] which: no apptainer in ((null))
[2024-05-16 00:45:42] apptainer is not installed, using version from CVMFS
[2024-05-16 00:45:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-16 00:45:44] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-05-16 00:45:44] apptainer works
[2024-05-16 00:45:44] Set ATHENA_PROC_NUMBER=4
[2024-05-16 00:45:44] Set ATHENA_CORE_NUMBER=4
[2024-05-16 00:45:44] Starting ATLAS job with PandaID=6199657160
[2024-05-16 00:45:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-16 04:59:41]  *** The last 200 lines of the pilot log: ***
[2024-05-16 04:59:41] 2024-05-16 02:59:19,403 | INFO     | model: linear, x: [1715813175.0, 1715813236.0, 1715813297.0, 1715813358.0, 1715813419.0, 1715813480.0, 1715813541.0, 1715813602.0, 1715813663.0, 1715813724.0, 1715
[2024-05-16 04:59:41] 2024-05-16 02:59:19,403 | INFO     | sum of square deviations: 4504437945.0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,405 | INFO     | sum of deviations: 112302297042.99998
[2024-05-16 04:59:41] 2024-05-16 02:59:19,405 | INFO     | mean x: 1715820586.5
[2024-05-16 04:59:41] 2024-05-16 02:59:19,405 | INFO     | mean y: 2285920.8278688523
[2024-05-16 04:59:41] 2024-05-16 02:59:19,405 | INFO     | -- intersect: -42775657860.48389
[2024-05-16 04:59:41] 2024-05-16 02:59:19,405 | INFO     | intersect: -42775657860.48389
[2024-05-16 04:59:41] 2024-05-16 02:59:19,405 | INFO     | chi2: 4.134707140225492
[2024-05-16 04:59:41] 2024-05-16 02:59:19,405 | INFO     | current chi2=4.134707140225492 (change=-0.006394570813704401 %)
[2024-05-16 04:59:41] 2024-05-16 02:59:19,405 | INFO     | right removable region: 243
[2024-05-16 04:59:41] 2024-05-16 02:59:19,405 | INFO     | model: linear, x: [1715813480.0, 1715813541.0, 1715813602.0, 1715813663.0, 1715813724.0, 1715813785.0, 1715813846.0, 1715813907.0, 1715813968.0, 1715814029.0, 1715
[2024-05-16 04:59:41] 2024-05-16 02:59:19,406 | INFO     | sum of square deviations: 4504437945.0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,407 | INFO     | sum of deviations: 56389903101.0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,408 | INFO     | mean x: 1715820891.5
[2024-05-16 04:59:41] 2024-05-16 02:59:19,408 | INFO     | mean y: 2318678.5573770492
[2024-05-16 04:59:41] 2024-05-16 02:59:19,408 | INFO     | -- intersect: -21477602899.173767
[2024-05-16 04:59:41] 2024-05-16 02:59:19,408 | INFO     | intersect: -21477602899.173767
[2024-05-16 04:59:41] 2024-05-16 02:59:19,408 | INFO     | chi2: 1.5999573094900164
[2024-05-16 04:59:41] 2024-05-16 02:59:19,408 | INFO     | current chi2=1.5999573094900164 (change=61.301742405729385 %)
[2024-05-16 04:59:41] 2024-05-16 02:59:19,409 | INFO     | model: linear, x: [1715813785.0, 1715813846.0, 1715813907.0, 1715813968.0, 1715814029.0, 1715814090.0, 1715814151.0, 1715814212.0, 1715814273.0, 1715814334.0, 1715
[2024-05-16 04:59:41] 2024-05-16 02:59:19,409 | INFO     | sum of square deviations: 4233158440.0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,411 | INFO     | sum of deviations: 9141776224.0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,411 | INFO     | mean x: 1715821044.0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,411 | INFO     | mean y: 2345241.376569038
[2024-05-16 04:59:41] 2024-05-16 02:59:19,411 | INFO     | -- intersect: -3703079974.0987244
[2024-05-16 04:59:41] 2024-05-16 02:59:19,411 | INFO     | intersect: -3703079974.0987244
[2024-05-16 04:59:41] 2024-05-16 02:59:19,412 | INFO     | chi2: 0.07868836064110407
[2024-05-16 04:59:41] 2024-05-16 02:59:19,412 | INFO     | current chi2=0.07868836064110407 (change=95.08184623587327 %)
[2024-05-16 04:59:41] 2024-05-16 02:59:19,412 | INFO     | model: linear, x: [1715814090.0, 1715814151.0, 1715814212.0, 1715814273.0, 1715814334.0, 1715814395.0, 1715814456.0, 1715814517.0, 1715814578.0, 1715814639.0, 1715
[2024-05-16 04:59:41] 2024-05-16 02:59:19,412 | INFO     | sum of square deviations: 3972995422.5
[2024-05-16 04:59:41] 2024-05-16 02:59:19,414 | INFO     | sum of deviations: 1911527109.9999998
[2024-05-16 04:59:41] 2024-05-16 02:59:19,414 | INFO     | mean x: 1715821196.5
[2024-05-16 04:59:41] 2024-05-16 02:59:19,414 | INFO     | mean y: 2349431.4444444445
[2024-05-16 04:59:41] 2024-05-16 02:59:19,414 | INFO     | -- intersect: -823183544.1154807
[2024-05-16 04:59:41] 2024-05-16 02:59:19,414 | INFO     | intersect: -823183544.1154807
[2024-05-16 04:59:41] 2024-05-16 02:59:19,414 | INFO     | chi2: 0.0018332007791334794
[2024-05-16 04:59:41] 2024-05-16 02:59:19,415 | INFO     | current chi2=0.0018332007791334794 (change=97.6703024892148 %)
[2024-05-16 04:59:41] 2024-05-16 02:59:19,415 | INFO     | model: linear, x: [1715814395.0, 1715814456.0, 1715814517.0, 1715814578.0, 1715814639.0, 1715814700.0, 1715814761.0, 1715814822.0, 1715814883.0, 1715814944.0, 1715
[2024-05-16 04:59:41] 2024-05-16 02:59:19,415 | INFO     | sum of square deviations: 3723716330.0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,416 | INFO     | sum of deviations: 1980287896.0000005
[2024-05-16 04:59:41] 2024-05-16 02:59:19,416 | INFO     | mean x: 1715821349.0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,417 | INFO     | mean y: 2349388.6331877727
[2024-05-16 04:59:41] 2024-05-16 02:59:19,417 | INFO     | -- intersect: -910131570.7107514
[2024-05-16 04:59:41] 2024-05-16 02:59:19,417 | INFO     | intersect: -910131570.7107514
[2024-05-16 04:59:41] 2024-05-16 02:59:19,417 | INFO     | chi2: 0.0017918628327363072
[2024-05-16 04:59:41] 2024-05-16 02:59:19,417 | INFO     | current chi2=0.0017918628327363072 (change=2.2549601149914373 %)
[2024-05-16 04:59:41] 2024-05-16 02:59:19,417 | INFO     | left removable region: 40
[2024-05-16 04:59:41] 2024-05-16 02:59:19,417 | INFO     | model: linear, x: [1715815615.0, 1715815676.0, 1715815737.0, 1715815798.0, 1715815859.0, 1715815920.0, 1715815981.0, 1715816042.0, 1715816103.0, 1715816164.0, 1715
[2024-05-16 04:59:41] 2024-05-16 02:59:19,417 | INFO     | sum of square deviations: 2593916542.0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,418 | INFO     | sum of deviations: 2348965003.0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,418 | INFO     | mean x: 1715821776.0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,418 | INFO     | mean y: 2349030.921182266
[2024-05-16 04:59:41] 2024-05-16 02:59:19,418 | INFO     | -- intersect: -1551442402.9781222
[2024-05-16 04:59:41] 2024-05-16 02:59:19,418 | INFO     | intersect: -1551442402.9781222
[2024-05-16 04:59:41] 2024-05-16 02:59:19,418 | INFO     | chi2: 0.0001632338234003561
[2024-05-16 04:59:41] 2024-05-16 02:59:19,418 | INFO     | -- intersect: -1551442402.9781222
[2024-05-16 04:59:41] 2024-05-16 02:59:19,419 | INFO     | current memory leak: 0.91 B/s (using 203 data points, chi2=0.00)
[2024-05-16 04:59:41] 2024-05-16 02:59:19,419 | INFO     | ..............................
[2024-05-16 04:59:41] 2024-05-16 02:59:19,419 | INFO     | . Timing measurements:
[2024-05-16 04:59:41] 2024-05-16 02:59:19,419 | INFO     | . get job = 0 s
[2024-05-16 04:59:41] 2024-05-16 02:59:19,419 | INFO     | . initial setup = 1 s
[2024-05-16 04:59:41] 2024-05-16 02:59:19,419 | INFO     | . payload setup = 4 s
[2024-05-16 04:59:41] 2024-05-16 02:59:19,419 | INFO     | . stage-in = 0 s
[2024-05-16 04:59:41] 2024-05-16 02:59:19,419 | INFO     | . payload execution = 15176 s
[2024-05-16 04:59:41] 2024-05-16 02:59:19,419 | INFO     | . stage-out = 1 s
[2024-05-16 04:59:41] 2024-05-16 02:59:19,419 | INFO     | . log creation = 0 s
[2024-05-16 04:59:41] 2024-05-16 02:59:19,419 | INFO     | ..............................
[2024-05-16 04:59:41] 2024-05-16 02:59:19,477 | INFO     | 
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | job summary report
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | --------------------------------------------------
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | PanDA job id: 6199657160
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | task id: 38744235
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | errors: (none)
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | pilot state: finished 
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | transexitcode: 0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | exeerrorcode: 0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | exeerrordiag: 
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | exitcode: 0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | exitmsg: OK
[2024-05-16 04:59:41] 2024-05-16 02:59:19,478 | INFO     | cpuconsumptiontime: 57801 s
[2024-05-16 04:59:41] 2024-05-16 02:59:19,479 | INFO     | nevents: 400
[2024-05-16 04:59:41] 2024-05-16 02:59:19,479 | INFO     | neventsw: 0
[2024-05-16 04:59:41] 2024-05-16 02:59:19,479 | INFO     | pid: 1355927
[2024-05-16 04:59:41] 2024-05-16 02:59:19,479 | INFO     | pgrp: 1355927
[2024-05-16 04:59:41] 2024-05-16 02:59:19,479 | INFO     | corecount: 4
[2024-05-16 04:59:41] 2024-05-16 02:59:19,479 | INFO     | event service: False
[2024-05-16 04:59:41] 2024-05-16 02:59:19,479 | INFO     | sizes: {0: 2392077, 4: 2392283, 11: 2392311, 15185: 2423306, 15187: 2432288, 15188: 2432344, 15193: 2432642}
[2024-05-16 04:59:41] 2024-05-16 02:59:19,479 | INFO     | --------------------------------------------------
[2024-05-16 04:59:41] 2024-05-16 02:59:19,479 | INFO     | 
[2024-05-16 04:59:41] 2024-05-16 02:59:19,479 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/1
[2024-05-16 04:59:41] 2024-05-16 02:59:19,587 | WARNING  | process 1355927 is no longer using CPU - aborting
[2024-05-16 04:59:41] 2024-05-16 02:59:19,587 | INFO     | aborting job monitoring since job object (job id=6199657160) has expired
[2024-05-16 04:59:41] 2024-05-16 02:59:19,606 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,607 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,608 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-16 04:59:41] 2024-05-16 02:59:19,608 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,608 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-16 04:59:41] 2024-05-16 02:59:19,608 | INFO     | job 6199657160 has completed (purged errors)
[2024-05-16 04:59:41] 2024-05-16 02:59:19,608 | INFO     | overall cleanup function is called
[2024-05-16 04:59:41] 2024-05-16 02:59:20,614 | INFO     | --- collectZombieJob: --- 10, [1355927]
[2024-05-16 04:59:41] 2024-05-16 02:59:20,615 | INFO     | zombie collector waiting for pid 1355927
[2024-05-16 04:59:41] 2024-05-16 02:59:20,615 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-16 04:59:41] 2024-05-16 02:59:21,619 | INFO     | collected zombie processes
[2024-05-16 04:59:41] 2024-05-16 02:59:21,620 | INFO     | will now attempt to kill all subprocesses of pid=1355927
[2024-05-16 04:59:41] 2024-05-16 02:59:21,786 | INFO     | process IDs to be killed: [1355927] (in reverse order)
[2024-05-16 04:59:41] 2024-05-16 02:59:21,903 | WARNING  | found no corresponding commands to process id(s)
[2024-05-16 04:59:41] 2024-05-16 02:59:21,903 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-16 04:59:41] 2024-05-16 02:59:21,911 | INFO     | did not find any defunct processes belonging to 1355927
[2024-05-16 04:59:41] 2024-05-16 02:59:21,917 | INFO     | did not find any defunct processes belonging to 1355927
[2024-05-16 04:59:41] 2024-05-16 02:59:21,918 | INFO     | ready for new job
[2024-05-16 04:59:41] 2024-05-16 02:59:21,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-16 04:59:41] 2024-05-16 02:59:21,919 | INFO     | *************************************
[2024-05-16 04:59:41] 2024-05-16 02:59:21,919 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-16 04:59:41] 2024-05-16 02:59:21,920 | INFO     | *************************************
[2024-05-16 04:59:41] 2024-05-16 02:59:21,920 | INFO     | 
[2024-05-16 04:59:41] 2024-05-16 02:59:21,922 | INFO     | architecture information:
[2024-05-16 04:59:41] 2024-05-16 02:59:21,923 | INFO     | executing command: cat /etc/os-release
[2024-05-16 04:59:41] 2024-05-16 02:59:21,935 | INFO     | cat /etc/os-release:
[2024-05-16 04:59:41] NAME="CentOS Linux"
[2024-05-16 04:59:41] VERSION="7 (Core)"
[2024-05-16 04:59:41] ID="centos"
[2024-05-16 04:59:41] ID_LIKE="rhel fedora"
[2024-05-16 04:59:41] VERSION_ID="7"
[2024-05-16 04:59:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-16 04:59:41] ANSI_COLOR="0;31"
[2024-05-16 04:59:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-16 04:59:41] HOME_URL="https://www.centos.org/"
[2024-05-16 04:59:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-16 04:59:41] 
[2024-05-16 04:59:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-16 04:59:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-16 04:59:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-16 04:59:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-16 04:59:41] 
[2024-05-16 04:59:41] 2024-05-16 02:59:21,935 | INFO     | *************************************
[2024-05-16 04:59:41] 2024-05-16 02:59:22,437 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/1
[2024-05-16 04:59:41] 2024-05-16 02:59:22,455 | INFO     | sufficient remaining disk space (582737723392 B)
[2024-05-16 04:59:41] 2024-05-16 02:59:22,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-16 04:59:41] 2024-05-16 02:59:22,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-16 04:59:41] 2024-05-16 02:59:22,472 | INFO     | found 0 job(s) in 20 queues
[2024-05-16 04:59:41] 2024-05-16 02:59:22,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-16 04:59:41] 2024-05-16 02:59:22,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-16 04:59:41] 2024-05-16 02:59:22,529 | INFO     | all payload control threads have been joined
[2024-05-16 04:59:41] 2024-05-16 02:59:22,574 | INFO     | all data control threads have been joined
[2024-05-16 04:59:41] 2024-05-16 02:59:22,589 | INFO     | all job control threads have been joined
[2024-05-16 04:59:41] 2024-05-16 02:59:23,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-16 04:59:41] 2024-05-16 02:59:23,090 | INFO     | aborting loop
[2024-05-16 04:59:41] 2024-05-16 02:59:23,460 | INFO     | [job] retrieve thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:23,534 | INFO     | [payload] control thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:23,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-16 04:59:41] 2024-05-16 02:59:23,571 | INFO     | [payload] failed_post thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:23,579 | INFO     | [data] control thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:23,595 | INFO     | [job] control thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:23,635 | INFO     | [job] validate thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:23,679 | INFO     | [payload] validate_post thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:24,080 | INFO     | [payload] validate_pre thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:24,094 | INFO     | [job] job monitor thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:24,119 | INFO     | [data] copytool_in thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:24,139 | INFO     | [job] create_data_payload thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:24,398 | INFO     | [payload] execute_payloads thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:24,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-16 04:59:41] 2024-05-16 02:59:24,607 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-16 04:59:41] 2024-05-16 02:59:25,491 | INFO     | [job] queue monitor thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:25,552 | INFO     | [data] copytool_out thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:28,612 | INFO     | [data] queue_monitor thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:32,732 | INFO     | job.realtimelogging is not enabled
[2024-05-16 04:59:41] 2024-05-16 02:59:33,737 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-16 04:59:41] 2024-05-16 02:59:35,671 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47045484319808)>', '<ExcThread(monitor, started 47045655570176)>']
[2024-05-16 04:59:41] 2024-05-16 02:59:36,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-16 04:59:41] 2024-05-16 02:59:36,538 | INFO     | [monitor] control thread has ended
[2024-05-16 04:59:41] 2024-05-16 02:59:40,696 | INFO     | all workflow threads have been joined
[2024-05-16 04:59:41] 2024-05-16 02:59:40,697 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-16 04:59:41] 2024-05-16 02:59:40,697 | INFO     | traces error code: 0
[2024-05-16 04:59:41] 2024-05-16 02:59:40,697 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-16 04:59:41] 2024-05-16 02:59:40,772 [wrapper] ==== pilot stdout END ====
[2024-05-16 04:59:41] 2024-05-16 02:59:40,774 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-16 04:59:41] 2024-05-16 02:59:40,777 [wrapper] pilotpid: 1348830
[2024-05-16 04:59:41] 2024-05-16 02:59:40,779 [wrapper] Pilot exit status: 0
[2024-05-16 04:59:41] 2024-05-16 02:59:40,803 [wrapper] pandaids: 6199657160
[2024-05-16 04:59:41] 2024-05-16 02:59:40,892 [wrapper] cleanup: SIGTERM to supervisor_pilot 1981946 1348831
[2024-05-16 04:59:41] 2024-05-16 02:59:40,894 [wrapper] Test setup, not cleaning
[2024-05-16 04:59:41] 2024-05-16 02:59:40,896 [wrapper] ==== wrapper stdout END ====
[2024-05-16 04:59:41] 2024-05-16 02:59:40,898 [wrapper] ==== wrapper stderr END ====
[2024-05-16 04:59:41] 2024-05-16 02:59:40,902 [wrapper] apfmon messages muted
[2024-05-16 04:59:41]  *** Error codes and diagnostics ***
[2024-05-16 04:59:41]     "exeErrorCode": 0,
[2024-05-16 04:59:41]     "exeErrorDiag": "",
[2024-05-16 04:59:41]     "pilotErrorCode": 0,
[2024-05-16 04:59:41]     "pilotErrorDiag": "",
[2024-05-16 04:59:41]  *** Listing of results directory ***
[2024-05-16 04:59:41] total 868240
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc    467845 May  9 03:36 pilot3.tar.gz
[2024-05-16 04:59:41] -rwx------ 1 boinc boinc     32251 May  9 03:42 runpilot2-wrapper.sh
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc      5633 May  9 03:49 queuedata.json
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc       100 May 16 00:45 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-16 04:59:41] -rwxr-xr-x 1 boinc boinc      7986 May 16 00:45 run_atlas
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc       105 May 16 00:45 job.xml
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc      6662 May 16 00:45 init_data.xml
[2024-05-16 04:59:41] -rw-r--r-- 2 boinc boinc 627613749 May 16 00:45 EVNT.38744233._000046.pool.root.1
[2024-05-16 04:59:41] -rw-r--r-- 2 boinc boinc     17537 May 16 00:45 start_atlas.sh
[2024-05-16 04:59:41] drwxrwx--x 2 boinc boinc      4096 May 16 00:45 shared
[2024-05-16 04:59:41] -rw-r--r-- 2 boinc boinc    479983 May 16 00:45 input.tar.gz
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc         0 May 16 00:45 boinc_lockfile
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc      2538 May 16 00:45 pandaJob.out
[2024-05-16 04:59:41] -rw------- 1 boinc boinc       424 May 16 00:45 setup.sh.local
[2024-05-16 04:59:41] -rw------- 1 boinc boinc   1011339 May 16 00:45 agis_schedconf.cvmfs.json
[2024-05-16 04:59:41] -rw------- 1 boinc boinc   1324701 May 16 00:45 cric_ddmendpoints.json
[2024-05-16 04:59:41] drwx------ 4 boinc boinc      4096 May 16 00:45 pilot3
[2024-05-16 04:59:41] -rw------- 1 boinc boinc        95 May 16 04:58 pilot_heartbeat.json
[2024-05-16 04:59:41] -rw------- 1 boinc boinc 253974546 May 16 04:58 HITS.38744235._001148.pool.root.1
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc       531 May 16 04:58 boinc_task_state.xml
[2024-05-16 04:59:41] -rw------- 1 boinc boinc      1047 May 16 04:59 memory_monitor_summary.json
[2024-05-16 04:59:41] -rw------- 1 boinc boinc         0 May 16 04:59 agis_ddmendpoints.agis.ALL.json
[2024-05-16 04:59:41] -rw------- 1 boinc boinc    344402 May 16 04:59 log.38744235._001148.job.log.tgz.1
[2024-05-16 04:59:41] -rw------- 1 boinc boinc      7755 May 16 04:59 heartbeat.json
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc      8192 May 16 04:59 boinc_mmap_file
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc        28 May 16 04:59 wrapper_checkpoint.txt
[2024-05-16 04:59:41] -rw------- 1 boinc boinc      4293 May 16 04:59 pilotlog.txt
[2024-05-16 04:59:41] -rw------- 1 boinc boinc   1636695 May 16 04:59 log.38744235._001148.job.log.1
[2024-05-16 04:59:41] -rw------- 1 boinc boinc       357 May 16 04:59 output.list
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc       620 May 16 04:59 runtime_log
[2024-05-16 04:59:41] -rw------- 1 boinc boinc   1996800 May 16 04:59 result.tar.gz
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc     11410 May 16 04:59 runtime_log.err
[2024-05-16 04:59:41] -rw------- 1 boinc boinc       658 May 16 04:59 b8YMDmEz7O5n7Olcko1bjSoqABFKDmABFKDmOtvXDm5FWKDmuWHy0m.diag
[2024-05-16 04:59:41] -rw-r--r-- 1 boinc boinc     21378 May 16 04:59 stderr.txt
[2024-05-16 04:59:41] HITS file was successfully produced:
[2024-05-16 04:59:41] -rw------- 1 boinc boinc 253974546 May 16 04:58 shared/HITS.pool.root.1
[2024-05-16 04:59:41]  *** Contents of shared directory: ***
[2024-05-16 04:59:41] total 863384
[2024-05-16 04:59:41] -rw-r--r-- 2 boinc boinc 627613749 May 16 00:45 ATLAS.root_0
[2024-05-16 04:59:41] -rw-r--r-- 2 boinc boinc     17537 May 16 00:45 start_atlas.sh
[2024-05-16 04:59:41] -rw-r--r-- 2 boinc boinc    479983 May 16 00:45 input.tar.gz
[2024-05-16 04:59:41] -rw------- 1 boinc boinc 253974546 May 16 04:58 HITS.pool.root.1
[2024-05-16 04:59:41] -rw------- 1 boinc boinc   1996800 May 16 04:59 result.tar.gz
04:59:43 (1343943): run_atlas exited; CPU time 57482.574736
04:59:43 (1343943): called boinc_finish(0)

</stderr_txt>
]]>

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