Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:37:00 (3311961): wrapper (7.7.26015): starting
19:37:00 (3311961): wrapper: running run_atlas (--nthreads 4)
[2024-05-14 19:37:00] Arguments: --nthreads 4
[2024-05-14 19:37:00] Threads: 4
[2024-05-14 19:37:00] Checking for CVMFS
[2024-05-14 19:37:00] No cvmfs_config command found, will try listing directly
[2024-05-14 19:37:00] CVMFS is ok
[2024-05-14 19:37:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-14 19:37:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-14 19:37:00] Further information can be found at the LHC@home message board.
[2024-05-14 19:37:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-14 19:37:00] Checking for apptainer binary...
[2024-05-14 19:37:00] which: no apptainer in ((null))
[2024-05-14 19:37:00] apptainer is not installed, using version from CVMFS
[2024-05-14 19:37:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-14 19:37:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2024-05-14 19:37:02] apptainer works
[2024-05-14 19:37:02] Set ATHENA_PROC_NUMBER=4
[2024-05-14 19:37:02] Set ATHENA_CORE_NUMBER=4
[2024-05-14 19:37:02] Starting ATLAS job with PandaID=6199655137
[2024-05-14 19:37:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-14 23:31:52]  *** The last 200 lines of the pilot log: ***
[2024-05-14 23:31:52]  ddm_activity=['write_lan', 'write_wan']
[2024-05-14 23:31:52]  ddmendpoint=NDGF-T1_DATADISK
[2024-05-14 23:31:52]  direct_access_lan=False
[2024-05-14 23:31:52]  direct_access_wan=False
[2024-05-14 23:31:52]  domain=
[2024-05-14 23:31:52]  filesize=342198
[2024-05-14 23:31:52]  filetype=log
[2024-05-14 23:31:52]  guid=ccd94de6-28b7-4eaf-b564-53a0ced87228
[2024-05-14 23:31:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-14 23:31:52]  is_tar=False
[2024-05-14 23:31:52]  lfn=log.38744235._000741.job.log.tgz.1
[2024-05-14 23:31:52]  mtime=0
[2024-05-14 23:31:52]  protocol_id=None
[2024-05-14 23:31:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-14 23:31:52]  replicas=None
[2024-05-14 23:31:52]  scope=mc23_13p6TeV
[2024-05-14 23:31:52]  status=None
[2024-05-14 23:31:52]  status_code=0
[2024-05-14 23:31:52]  storage_token=
[2024-05-14 23:31:52]  surl=/scratch/boinc/var/slot36/slots/1/PanDA_Pilot-6199655137/log.38744235._000741.job.log.tgz.1
[2024-05-14 23:31:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/a6/log.38744235._000741.job.log.tgz.1
[2024-05-14 23:31:52]  workdir=None
[2024-05-14 23:31:52] ]
[2024-05-14 23:31:52] 2024-05-14 21:31:30,700 | INFO     | transferring file log.38744235._000741.job.log.tgz.1 from /scratch/boinc/var/slot36/slots/1/PanDA_Pilot-6199655137/log.38744235._000741.job.log.tgz.1 to /scratch/b
[2024-05-14 23:31:52] 2024-05-14 21:31:30,700 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot36/slots/1/PanDA_Pilot-6199655137/log.38744235._000741.job.log.tgz.1 /scratch/boinc/var/slot36/slots/1/lo
[2024-05-14 23:31:52] 2024-05-14 21:31:30,723 | INFO     | adding to output.list: log.38744235._000741.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/a6/log.38744235._000741.job.log.tg
[2024-05-14 23:31:52] 2024-05-14 21:31:30,724 | INFO     | summary of transferred files:
[2024-05-14 23:31:52] 2024-05-14 21:31:30,724 | INFO     |  -- lfn=log.38744235._000741.job.log.tgz.1, status_code=0, status=transferred
[2024-05-14 23:31:52] 2024-05-14 21:31:30,724 | INFO     | stage-out finished correctly
[2024-05-14 23:31:52] 2024-05-14 21:31:31,286 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-14 23:31:52] 2024-05-14 21:31:31,355 | INFO     | job 6199655137 has state=finished
[2024-05-14 23:31:52] 2024-05-14 21:31:31,355 | INFO     | preparing for final server update for job 6199655137 in state='finished'
[2024-05-14 23:31:52] 2024-05-14 21:31:31,356 | INFO     | this job has now completed (state=finished)
[2024-05-14 23:31:52] 2024-05-14 21:31:31,356 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-14 23:31:52] 2024-05-14 21:31:31,356 | INFO     | job 6199655137 has finished - writing final server update
[2024-05-14 23:31:52] 2024-05-14 21:31:31,356 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2949910/.job.ad'
[2024-05-14 23:31:52] 2024-05-14 21:31:31,356 | INFO     | total number of processed events: 400 (read)
[2024-05-14 23:31:52] 2024-05-14 21:31:31,363 | INFO     | executing command: lscpu
[2024-05-14 23:31:52] 2024-05-14 21:31:31,411 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-05-14 23:31:52] 2024-05-14 21:31:31,412 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-14 23:31:52] 2024-05-14 21:31:31,456 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-14 23:31:52] 2024-05-14 21:31:32,497 | INFO     | monitor loop #1049: job 0:6199655137 is in state 'finished'
[2024-05-14 23:31:52] 2024-05-14 21:31:32,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,001 | INFO     | monitor loop #1050: job 0:6199655137 is in state 'finished'
[2024-05-14 23:31:52] 2024-05-14 21:31:35,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,766 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-14 23:31:52] 2024-05-14 21:31:35,766 | INFO     | using path: /scratch/boinc/var/slot36/slots/1/PanDA_Pilot-6199655137/memory_monitor_summary.json (trf name=prmon)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,767 | INFO     | extracted standard info from prmon json
[2024-05-14 23:31:52] 2024-05-14 21:31:35,767 | INFO     | extracted standard memory fields from prmon json
[2024-05-14 23:31:52] 2024-05-14 21:31:35,768 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-14 23:31:52] 2024-05-14 21:31:35,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-14 23:31:52] 2024-05-14 21:31:35,772 | INFO     | fitting pss+swap vs Time
[2024-05-14 23:31:52] 2024-05-14 21:31:35,775 | INFO     | current chi2=3.645373076868271 (change=-0.032523481846964006 %)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,775 | INFO     | right removable region: 224
[2024-05-14 23:31:52] 2024-05-14 21:31:35,777 | INFO     | current chi2=1.3926091593829928 (change=61.78547284474599 %)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,779 | INFO     | current chi2=0.08155384638831412 (change=94.14380942141388 %)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,781 | INFO     | current chi2=0.01748204321366962 (change=78.56380294998002 %)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,782 | INFO     | current chi2=0.01647734507299717 (change=5.74702927108 %)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,782 | INFO     | left removable region: 40
[2024-05-14 23:31:52] 2024-05-14 21:31:35,784 | INFO     | current memory leak: 0.24 B/s (using 184 data points, chi2=0.01)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,784 | INFO     | ..............................
[2024-05-14 23:31:52] 2024-05-14 21:31:35,784 | INFO     | . Timing measurements:
[2024-05-14 23:31:52] 2024-05-14 21:31:35,784 | INFO     | . get job = 0 s
[2024-05-14 23:31:52] 2024-05-14 21:31:35,784 | INFO     | . initial setup = 1 s
[2024-05-14 23:31:52] 2024-05-14 21:31:35,784 | INFO     | . payload setup = 9 s
[2024-05-14 23:31:52] 2024-05-14 21:31:35,784 | INFO     | . stage-in = 0 s
[2024-05-14 23:31:52] 2024-05-14 21:31:35,784 | INFO     | . payload execution = 14019 s
[2024-05-14 23:31:52] 2024-05-14 21:31:35,784 | INFO     | . stage-out = 0 s
[2024-05-14 23:31:52] 2024-05-14 21:31:35,785 | INFO     | . log creation = 0 s
[2024-05-14 23:31:52] 2024-05-14 21:31:35,785 | INFO     | ..............................
[2024-05-14 23:31:52] 2024-05-14 21:31:35,853 | INFO     | 
[2024-05-14 23:31:52] 2024-05-14 21:31:35,854 | INFO     | job summary report
[2024-05-14 23:31:52] 2024-05-14 21:31:35,854 | INFO     | --------------------------------------------------
[2024-05-14 23:31:52] 2024-05-14 21:31:35,854 | INFO     | PanDA job id: 6199655137
[2024-05-14 23:31:52] 2024-05-14 21:31:35,854 | INFO     | task id: 38744235
[2024-05-14 23:31:52] 2024-05-14 21:31:35,854 | INFO     | errors: (none)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,854 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-14 23:31:52] 2024-05-14 21:31:35,854 | INFO     | pilot state: finished 
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | transexitcode: 0
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | exeerrorcode: 0
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | exeerrordiag: 
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | exitcode: 0
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | exitmsg: OK
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | cpuconsumptiontime: 52842 s
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | nevents: 400
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | neventsw: 0
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | pid: 3327214
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | pgrp: 3327214
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | corecount: 4
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | event service: False
[2024-05-14 23:31:52] 2024-05-14 21:31:35,855 | INFO     | sizes: {0: 2385560, 1: 2385560, 8: 2385794, 11: 2385822, 14033: 2416140, 14035: 2425306, 14040: 2425420}
[2024-05-14 23:31:52] 2024-05-14 21:31:35,856 | INFO     | --------------------------------------------------
[2024-05-14 23:31:52] 2024-05-14 21:31:35,856 | INFO     | 
[2024-05-14 23:31:52] 2024-05-14 21:31:35,856 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-05-14 23:31:52] 2024-05-14 21:31:35,884 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,885 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,885 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,885 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,885 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,885 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,885 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,886 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,886 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,886 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,886 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,886 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,886 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,886 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,887 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,887 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,887 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-14 23:31:52] 2024-05-14 21:31:35,887 | INFO     | job 6199655137 has completed (purged errors)
[2024-05-14 23:31:52] 2024-05-14 21:31:35,887 | INFO     | overall cleanup function is called
[2024-05-14 23:31:52] 2024-05-14 21:31:36,895 | INFO     | --- collectZombieJob: --- 10, [3327214]
[2024-05-14 23:31:52] 2024-05-14 21:31:36,895 | INFO     | zombie collector waiting for pid 3327214
[2024-05-14 23:31:52] 2024-05-14 21:31:36,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-14 23:31:52] 2024-05-14 21:31:37,900 | INFO     | collected zombie processes
[2024-05-14 23:31:52] 2024-05-14 21:31:37,900 | INFO     | will now attempt to kill all subprocesses of pid=3327214
[2024-05-14 23:31:52] 2024-05-14 21:31:38,110 | INFO     | process IDs to be killed: [3327214] (in reverse order)
[2024-05-14 23:31:52] 2024-05-14 21:31:38,293 | WARNING  | found no corresponding commands to process id(s)
[2024-05-14 23:31:52] 2024-05-14 21:31:38,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-14 23:31:52] 2024-05-14 21:31:38,306 | INFO     | did not find any defunct processes belonging to 3327214
[2024-05-14 23:31:52] 2024-05-14 21:31:38,316 | INFO     | did not find any defunct processes belonging to 3327214
[2024-05-14 23:31:52] 2024-05-14 21:31:38,316 | INFO     | ready for new job
[2024-05-14 23:31:52] 2024-05-14 21:31:38,316 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-14 23:31:52] 2024-05-14 21:31:38,317 | INFO     | *************************************
[2024-05-14 23:31:52] 2024-05-14 21:31:38,317 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-05-14 23:31:52] 2024-05-14 21:31:38,317 | INFO     | *************************************
[2024-05-14 23:31:52] 2024-05-14 21:31:38,317 | INFO     | 
[2024-05-14 23:31:52] 2024-05-14 21:31:38,322 | INFO     | architecture information:
[2024-05-14 23:31:52] 2024-05-14 21:31:38,323 | INFO     | executing command: cat /etc/os-release
[2024-05-14 23:31:52] 2024-05-14 21:31:38,335 | INFO     | cat /etc/os-release:
[2024-05-14 23:31:52] NAME="CentOS Linux"
[2024-05-14 23:31:52] VERSION="7 (Core)"
[2024-05-14 23:31:52] ID="centos"
[2024-05-14 23:31:52] ID_LIKE="rhel fedora"
[2024-05-14 23:31:52] VERSION_ID="7"
[2024-05-14 23:31:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-14 23:31:52] ANSI_COLOR="0;31"
[2024-05-14 23:31:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-14 23:31:52] HOME_URL="https://www.centos.org/"
[2024-05-14 23:31:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-14 23:31:52] 
[2024-05-14 23:31:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-14 23:31:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-14 23:31:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-14 23:31:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-14 23:31:52] 
[2024-05-14 23:31:52] 2024-05-14 21:31:38,335 | INFO     | *************************************
[2024-05-14 23:31:52] 2024-05-14 21:31:38,838 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-05-14 23:31:52] 2024-05-14 21:31:38,855 | INFO     | sufficient remaining disk space (3021733888000 B)
[2024-05-14 23:31:52] 2024-05-14 21:31:38,855 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-14 23:31:52] 2024-05-14 21:31:38,855 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-14 23:31:52] 2024-05-14 21:31:38,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-14 23:31:52] 2024-05-14 21:31:38,856 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-14 23:31:52] 2024-05-14 21:31:38,856 | INFO     | aborting loop
[2024-05-14 23:31:52] 2024-05-14 21:31:39,121 | INFO     | all payload control threads have been joined
[2024-05-14 23:31:52] 2024-05-14 21:31:39,270 | INFO     | found 0 job(s) in 20 queues
[2024-05-14 23:31:52] 2024-05-14 21:31:39,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-14 23:31:52] 2024-05-14 21:31:39,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-14 23:31:52] 2024-05-14 21:31:39,650 | INFO     | all data control threads have been joined
[2024-05-14 23:31:52] 2024-05-14 21:31:39,861 | INFO     | [job] retrieve thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:39,862 | INFO     | [job] job monitor thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:39,897 | INFO     | [payload] validate_pre thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:39,932 | INFO     | [job] create_data_payload thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:40,084 | INFO     | [data] copytool_in thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:40,122 | INFO     | [payload] execute_payloads thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:40,126 | INFO     | [payload] control thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:40,470 | INFO     | all job control threads have been joined
[2024-05-14 23:31:52] 2024-05-14 21:31:40,655 | INFO     | [data] control thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:40,827 | INFO     | [job] validate thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:40,862 | INFO     | [data] copytool_out thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:40,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-14 23:31:52] 2024-05-14 21:31:41,115 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:41,257 | INFO     | [payload] validate_post thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:41,418 | INFO     | [payload] failed_post thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:41,475 | INFO     | [job] control thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:41,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-14 23:31:52] 2024-05-14 21:31:41,869 | INFO     | [job] queue monitor thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:45,872 | INFO     | [data] queue_monitor thread has finished
[2024-05-14 23:31:52] 2024-05-14 21:31:46,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46935885009984)>', '<ExcThread(monitor, started 46936054142720)>']
[2024-05-14 23:31:52] 2024-05-14 21:31:46,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-14 23:31:52] 2024-05-14 21:31:46,305 | INFO     | [monitor] control thread has ended
[2024-05-14 23:31:52] 2024-05-14 21:31:51,244 | INFO     | all workflow threads have been joined
[2024-05-14 23:31:52] 2024-05-14 21:31:51,244 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-14 23:31:52] 2024-05-14 21:31:51,244 | INFO     | traces error code: 0
[2024-05-14 23:31:52] 2024-05-14 21:31:51,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-14 23:31:52] 2024-05-14 21:31:51,323 [wrapper] ==== pilot stdout END ====
[2024-05-14 23:31:52] 2024-05-14 21:31:51,328 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-14 23:31:52] 2024-05-14 21:31:51,330 [wrapper] pilotpid: 3319570
[2024-05-14 23:31:52] 2024-05-14 21:31:51,332 [wrapper] Pilot exit status: 0
[2024-05-14 23:31:52] 2024-05-14 21:31:51,340 [wrapper] pandaids: 6199655137
[2024-05-14 23:31:52] 2024-05-14 21:31:51,434 [wrapper] cleanup: SIGTERM to supervisor_pilot  264486 3319571
[2024-05-14 23:31:52] 2024-05-14 21:31:51,436 [wrapper] Test setup, not cleaning
[2024-05-14 23:31:52] 2024-05-14 21:31:51,438 [wrapper] ==== wrapper stdout END ====
[2024-05-14 23:31:52] 2024-05-14 21:31:51,440 [wrapper] ==== wrapper stderr END ====
[2024-05-14 23:31:52] 2024-05-14 21:31:51,444 [wrapper] apfmon messages muted
[2024-05-14 23:31:52]  *** Error codes and diagnostics ***
[2024-05-14 23:31:52]     "exeErrorCode": 0,
[2024-05-14 23:31:52]     "exeErrorDiag": "",
[2024-05-14 23:31:52]     "pilotErrorCode": 0,
[2024-05-14 23:31:52]     "pilotErrorDiag": "",
[2024-05-14 23:31:52]  *** Listing of results directory ***
[2024-05-14 23:31:52] total 868228
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc      5633 May  9 03:38 queuedata.json
[2024-05-14 23:31:52] -rwx------ 1 boinc boinc     32251 May  9 03:38 runpilot2-wrapper.sh
[2024-05-14 23:31:52] -rw------- 1 boinc boinc    468593 May  9 03:38 pilot3.tar.gz
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc       100 May 14 19:36 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-14 23:31:52] -rwxr-xr-x 1 boinc boinc      7986 May 14 19:36 run_atlas
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc       105 May 14 19:36 job.xml
[2024-05-14 23:31:52] -rw-r--r-- 2 boinc boinc     17537 May 14 19:37 start_atlas.sh
[2024-05-14 23:31:52] drwxrwx--x 2 boinc boinc      4096 May 14 19:37 shared
[2024-05-14 23:31:52] -rw-r--r-- 2 boinc boinc    481361 May 14 19:37 input.tar.gz
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc      6643 May 14 19:37 init_data.xml
[2024-05-14 23:31:52] -rw-r--r-- 2 boinc boinc 625249376 May 14 19:37 EVNT.38744233._000029.pool.root.1
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc         0 May 14 19:37 boinc_lockfile
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc      2536 May 14 19:37 pandaJob.out
[2024-05-14 23:31:52] -rw------- 1 boinc boinc       424 May 14 19:37 setup.sh.local
[2024-05-14 23:31:52] -rw------- 1 boinc boinc   1008608 May 14 19:37 agis_schedconf.cvmfs.json
[2024-05-14 23:31:52] -rw------- 1 boinc boinc   1319809 May 14 19:37 cric_ddmendpoints.json
[2024-05-14 23:31:52] drwx------ 6 boinc boinc      4096 May 14 19:37 pilot3
[2024-05-14 23:31:52] -rw------- 1 boinc boinc 257032550 May 14 23:30 HITS.38744235._000741.pool.root.1
[2024-05-14 23:31:52] -rw------- 1 boinc boinc        95 May 14 23:31 pilot_heartbeat.json
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc       532 May 14 23:31 boinc_task_state.xml
[2024-05-14 23:31:52] -rw------- 1 boinc boinc      1045 May 14 23:31 memory_monitor_summary.json
[2024-05-14 23:31:52] -rw------- 1 boinc boinc         0 May 14 23:31 agis_ddmendpoints.agis.ALL.json
[2024-05-14 23:31:52] -rw------- 1 boinc boinc    342198 May 14 23:31 log.38744235._000741.job.log.tgz.1
[2024-05-14 23:31:52] -rw------- 1 boinc boinc      7697 May 14 23:31 heartbeat.json
[2024-05-14 23:31:52] -rw------- 1 boinc boinc      4222 May 14 23:31 pilotlog.txt
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc      8192 May 14 23:31 boinc_mmap_file
[2024-05-14 23:31:52] -rw------- 1 boinc boinc   1288600 May 14 23:31 log.38744235._000741.job.log.1
[2024-05-14 23:31:52] -rw------- 1 boinc boinc       357 May 14 23:31 output.list
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc       620 May 14 23:31 runtime_log
[2024-05-14 23:31:52] -rw------- 1 boinc boinc   1648640 May 14 23:31 result.tar.gz
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc     11410 May 14 23:31 runtime_log.err
[2024-05-14 23:31:52] -rw------- 1 boinc boinc       659 May 14 23:31 nmJNDmUv7O5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmqiFKDmFSlYBn.diag
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc        28 May 14 23:31 wrapper_checkpoint.txt
[2024-05-14 23:31:52] -rw-r--r-- 1 boinc boinc     20925 May 14 23:31 stderr.txt
[2024-05-14 23:31:52] HITS file was successfully produced:
[2024-05-14 23:31:52] -rw------- 1 boinc boinc 257032550 May 14 23:30 shared/HITS.pool.root.1
[2024-05-14 23:31:52]  *** Contents of shared directory: ***
[2024-05-14 23:31:52] total 863720
[2024-05-14 23:31:52] -rw-r--r-- 2 boinc boinc     17537 May 14 19:37 start_atlas.sh
[2024-05-14 23:31:52] -rw-r--r-- 2 boinc boinc    481361 May 14 19:37 input.tar.gz
[2024-05-14 23:31:52] -rw-r--r-- 2 boinc boinc 625249376 May 14 19:37 ATLAS.root_0
[2024-05-14 23:31:52] -rw------- 1 boinc boinc 257032550 May 14 23:30 HITS.pool.root.1
[2024-05-14 23:31:52] -rw------- 1 boinc boinc   1648640 May 14 23:31 result.tar.gz
23:31:53 (3311961): run_atlas exited; CPU time 52482.326182
23:31:53 (3311961): called boinc_finish(0)

</stderr_txt>
]]>

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