Name | E0KMDmervO5nsSi4apGgGQJmABFKDmABFKDm4ySLDmQKIKDme7ob5n_0 |
Workunit | 222848721 |
Created | 8 May 2024, 12:46:32 UTC |
Sent | 2 Jun 2024, 6:34:31 UTC |
Report deadline | 24 Sep 2024, 12:08:16 UTC |
Received | 16 May 2024, 19:32:16 UTC |
Server state | In progress |
Outcome | Success |
Client state | Compute error |
Exit status | 0 (0x00000000) |
Computer ID | 10690563 |
Run time | 2 days 20 hours 10 min 17 sec |
CPU time | 11 days 2 hours 25 min 58 sec |
Validate state | Initial |
Credit | 0.00 |
Device peak FLOPS | 15.29 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.87 GB |
Peak swap size | 36.78 GB |
Peak disk usage | 5.24 GB |
<core_client_version>7.20.2</core_client_version> <![CDATA[ <stderr_txt> 01:02:18 (2456996): wrapper (7.7.26015): starting 01:02:18 (2456996): wrapper: running run_atlas (--nthreads 4) [2024-05-14 01:02:18] Arguments: --nthreads 4 [2024-05-14 01:02:18] Threads: 4 [2024-05-14 01:02:18] Checking for CVMFS [2024-05-14 01:02:18] No cvmfs_config command found, will try listing directly [2024-05-14 01:02:18] CVMFS is ok [2024-05-14 01:02:19] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-05-14 01:02:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2024-05-14 01:02:19] Further information can be found at the LHC@home message board. [2024-05-14 01:02:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-05-14 01:02:19] Checking for apptainer binary... [2024-05-14 01:02:19] which: no apptainer in ((null)) [2024-05-14 01:02:19] apptainer is not installed, using version from CVMFS [2024-05-14 01:02:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-05-14 01:02:20] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz [2024-05-14 01:02:20] apptainer works [2024-05-14 01:02:20] Set ATHENA_PROC_NUMBER=4 [2024-05-14 01:02:20] Set ATHENA_CORE_NUMBER=4 [2024-05-14 01:02:20] Starting ATLAS job with PandaID=6199068286 [2024-05-14 01:02:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh 05:16:39 (2696320): wrapper (7.7.26015): starting 05:16:39 (2696320): wrapper: running run_atlas (--nthreads 4) [2024-05-15 05:16:39] Arguments: --nthreads 4 [2024-05-15 05:16:39] Threads: 4 [2024-05-15 05:16:39] This job has been restarted, cleaning up previous attempt [2024-05-15 05:16:40] Checking for CVMFS [2024-05-15 05:16:40] No cvmfs_config command found, will try listing directly [2024-05-15 05:16:40] CVMFS is ok [2024-05-15 05:16:40] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-05-15 05:16:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2024-05-15 05:16:40] Further information can be found at the LHC@home message board. [2024-05-15 05:16:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-05-15 05:16:40] Checking for apptainer binary... [2024-05-15 05:16:40] which: no apptainer in ((null)) [2024-05-15 05:16:40] apptainer is not installed, using version from CVMFS [2024-05-15 05:16:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-05-15 05:16:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz [2024-05-15 05:16:41] apptainer works [2024-05-15 05:16:41] Set ATHENA_PROC_NUMBER=4 [2024-05-15 05:16:41] Set ATHENA_CORE_NUMBER=4 [2024-05-15 05:16:41] Starting ATLAS job with PandaID=6199068286 [2024-05-15 05:16:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2024-05-16 21:30:29] *** The last 200 lines of the pilot log: *** [2024-05-16 21:30:29] 2024-05-16 19:30:08,076 | INFO | job 6199068286 has state=finished [2024-05-16 21:30:29] 2024-05-16 19:30:08,077 | INFO | preparing for final server update for job 6199068286 in state='finished' [2024-05-16 21:30:29] 2024-05-16 19:30:08,078 | INFO | this job has now completed (state=finished) [2024-05-16 21:30:29] 2024-05-16 19:30:08,078 | INFO | pilot will not update the server (heartbeat message will be written to file) [2024-05-16 21:30:29] 2024-05-16 19:30:08,078 | INFO | job 6199068286 has finished - writing final server update [2024-05-16 21:30:29] 2024-05-16 19:30:08,078 | WARNING | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2614544/.job.ad' [2024-05-16 21:30:29] 2024-05-16 19:30:08,078 | INFO | total number of processed events: 3800 (read) [2024-05-16 21:30:29] 2024-05-16 19:30:08,083 | INFO | executing command: lscpu [2024-05-16 21:30:29] 2024-05-16 19:30:08,140 | INFO | found 32 cores (16 cores per socket, 2 sockets) [2024-05-16 21:30:29] 2024-05-16 19:30:08,141 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2024-05-16 21:30:29] 2024-05-16 19:30:08,187 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2024-05-16 21:30:29] 2024-05-16 19:30:08,554 | INFO | monitor loop #10917: job 0:6199068286 is in state 'finished' [2024-05-16 21:30:29] 2024-05-16 19:30:08,554 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2024-05-16 21:30:29] 2024-05-16 19:30:11,059 | INFO | monitor loop #10918: job 0:6199068286 is in state 'finished' [2024-05-16 21:30:29] 2024-05-16 19:30:11,059 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2024-05-16 21:30:29] 2024-05-16 19:30:13,039 | INFO | CPU arch script returned: x86-64-v4 [2024-05-16 21:30:29] 2024-05-16 19:30:13,039 | INFO | using path: /scratch/boinc/var/slot52/slots/1/PanDA_Pilot-6199068286/memory_monitor_summary.json (trf name=prmon) [2024-05-16 21:30:29] 2024-05-16 19:30:13,041 | INFO | extracted standard info from prmon json [2024-05-16 21:30:29] 2024-05-16 19:30:13,041 | INFO | extracted standard memory fields from prmon json [2024-05-16 21:30:29] 2024-05-16 19:30:13,041 | WARNING | GPU info not found in prmon json [2024-05-16 21:30:29] 2024-05-16 19:30:13,063 | INFO | fitting pss+swap vs Time [2024-05-16 21:30:29] 2024-05-16 19:30:13,065 | INFO | model: linear, x: [1715743034.0, 1715743095.0, 1715743156.0, 1715743217.0, 1715743278.0, 1715743339.0, 1715743400.0, 1715743461.0, 1715743522.0, 1715743583.0, 1715 [2024-05-16 21:30:29] 2024-05-16 19:30:13,066 | INFO | sum of square deviations: 4148779874607.4736 [2024-05-16 21:30:29] 2024-05-16 19:30:13,149 | INFO | sum of deviations: 5233380870499.07 [2024-05-16 21:30:29] 2024-05-16 19:30:13,149 | INFO | mean x: 1715815410.5033698 [2024-05-16 21:30:29] 2024-05-16 19:30:13,149 | INFO | mean y: 2721564.4267059816 [2024-05-16 21:30:29] 2024-05-16 19:30:13,149 | INFO | -- intersect: -2161653461.0102415 [2024-05-16 21:30:29] 2024-05-16 19:30:13,149 | INFO | intersect: -2161653461.0102415 [2024-05-16 21:30:29] 2024-05-16 19:30:13,151 | INFO | chi2: 17.352344586077056 [2024-05-16 21:30:29] 2024-05-16 19:30:13,152 | INFO | model: linear, x: [1715743034.0, 1715743095.0, 1715743156.0, 1715743217.0, 1715743278.0, 1715743339.0, 1715743400.0, 1715743461.0, 1715743522.0, 1715743583.0, 1715 [2024-05-16 21:30:29] 2024-05-16 19:30:13,153 | INFO | sum of square deviations: 4122621181929.9736 [2024-05-16 21:30:29] 2024-05-16 19:30:13,277 | INFO | sum of deviations: 5981219241045.516 [2024-05-16 21:30:29] 2024-05-16 19:30:13,277 | INFO | mean x: 1715815258.003377 [2024-05-16 21:30:29] 2024-05-16 19:30:13,277 | INFO | mean y: 2725923.684677079 [2024-05-16 21:30:29] 2024-05-16 19:30:13,277 | INFO | -- intersect: -2486628975.143278 [2024-05-16 21:30:29] 2024-05-16 19:30:13,277 | INFO | intersect: -2486628975.143278 [2024-05-16 21:30:29] 2024-05-16 19:30:13,281 | INFO | chi2: 14.377673357268218 [2024-05-16 21:30:29] 2024-05-16 19:30:13,281 | INFO | current chi2=14.377673357268218 (change=17.142762547463555 %) [2024-05-16 21:30:29] 2024-05-16 19:30:13,281 | INFO | right removable region: 2368 [2024-05-16 21:30:29] 2024-05-16 19:30:13,284 | INFO | model: linear, x: [1715743339.0, 1715743400.0, 1715743461.0, 1715743522.0, 1715743583.0, 1715743644.0, 1715743705.0, 1715743766.0, 1715743827.0, 1715743888.0, 1715 [2024-05-16 21:30:29] 2024-05-16 19:30:13,285 | INFO | sum of square deviations: 4122621177049.9736 [2024-05-16 21:30:29] 2024-05-16 19:30:13,416 | INFO | sum of deviations: 4465034628127.922 [2024-05-16 21:30:29] 2024-05-16 19:30:13,417 | INFO | mean x: 1715815563.003377 [2024-05-16 21:30:29] 2024-05-16 19:30:13,417 | INFO | mean y: 2726043.13592233 [2024-05-16 21:30:29] 2024-05-16 19:30:13,417 | INFO | -- intersect: -1855600389.3142684 [2024-05-16 21:30:29] 2024-05-16 19:30:13,417 | INFO | intersect: -1855600389.3142684 [2024-05-16 21:30:29] 2024-05-16 19:30:13,420 | INFO | chi2: 14.226490872227593 [2024-05-16 21:30:29] 2024-05-16 19:30:13,420 | INFO | current chi2=14.226490872227593 (change=18.01401360112191 %) [2024-05-16 21:30:29] 2024-05-16 19:30:13,420 | INFO | left removable region: 10 [2024-05-16 21:30:29] 2024-05-16 19:30:13,422 | INFO | model: linear, x: [1715743644.0, 1715743705.0, 1715743766.0, 1715743827.0, 1715743888.0, 1715743949.0, 1715744010.0, 1715744071.0, 1715744132.0, 1715744193.0, 1715 [2024-05-16 21:30:29] 2024-05-16 19:30:13,423 | INFO | sum of square deviations: 4065459582987.4727 [2024-05-16 21:30:29] 2024-05-16 19:30:13,552 | INFO | sum of deviations: 4686409258235.363 [2024-05-16 21:30:29] 2024-05-16 19:30:13,552 | INFO | mean x: 1715815532.5033927 [2024-05-16 21:30:29] 2024-05-16 19:30:13,552 | INFO | mean y: 2735133.328244275 [2024-05-16 21:30:29] 2024-05-16 19:30:13,552 | INFO | -- intersect: -1975150424.948309 [2024-05-16 21:30:29] 2024-05-16 19:30:13,552 | INFO | intersect: -1975150424.948309 [2024-05-16 21:30:29] 2024-05-16 19:30:13,555 | INFO | chi2: 8.479454426414472 [2024-05-16 21:30:29] 2024-05-16 19:30:13,555 | INFO | -- intersect: -1975150424.948309 [2024-05-16 21:30:29] 2024-05-16 19:30:13,556 | INFO | current memory leak: 1.15 B/s (using 2358 data points, chi2=8.48) [2024-05-16 21:30:29] 2024-05-16 19:30:13,557 | INFO | .............................. [2024-05-16 21:30:29] 2024-05-16 19:30:13,558 | INFO | . Timing measurements: [2024-05-16 21:30:29] 2024-05-16 19:30:13,558 | INFO | . get job = 0 s [2024-05-16 21:30:29] 2024-05-16 19:30:13,558 | INFO | . initial setup = 0 s [2024-05-16 21:30:29] 2024-05-16 19:30:13,558 | INFO | . payload setup = 7 s [2024-05-16 21:30:29] 2024-05-16 19:30:13,558 | INFO | . stage-in = 0 s [2024-05-16 21:30:29] 2024-05-16 19:30:13,558 | INFO | . payload execution = 144765 s [2024-05-16 21:30:29] 2024-05-16 19:30:13,558 | INFO | . stage-out = 5 s [2024-05-16 21:30:29] 2024-05-16 19:30:13,558 | INFO | . log creation = 2 s [2024-05-16 21:30:29] 2024-05-16 19:30:13,558 | INFO | .............................. [2024-05-16 21:30:29] 2024-05-16 19:30:13,937 | INFO | [2024-05-16 21:30:29] 2024-05-16 19:30:13,937 | INFO | job summary report [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | -------------------------------------------------- [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | PanDA job id: 6199068286 [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | task id: 38734053 [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | errors: (none) [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | status: LOG_TRANSFER = DONE [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | pilot state: finished [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | transexitcode: 0 [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | exeerrorcode: 0 [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | exeerrordiag: [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | exitcode: 0 [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | exitmsg: OK [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | cpuconsumptiontime: 580986 s [2024-05-16 21:30:29] 2024-05-16 19:30:13,938 | INFO | nevents: 3800 [2024-05-16 21:30:29] 2024-05-16 19:30:13,939 | INFO | neventsw: 0 [2024-05-16 21:30:29] 2024-05-16 19:30:13,939 | INFO | pid: 2708336 [2024-05-16 21:30:29] 2024-05-16 19:30:13,939 | INFO | pgrp: 2708336 [2024-05-16 21:30:29] 2024-05-16 19:30:13,939 | INFO | corecount: 4 [2024-05-16 21:30:29] 2024-05-16 19:30:13,939 | INFO | event service: False [2024-05-16 21:30:29] 2024-05-16 19:30:13,939 | INFO | sizes: {0: 2386088, 4: 2386294, 11: 2386322, 144776: 2501246, 144783: 2510228, 144785: 2510284, 144791: 2510634} [2024-05-16 21:30:29] 2024-05-16 19:30:13,939 | INFO | -------------------------------------------------- [2024-05-16 21:30:29] 2024-05-16 19:30:13,939 | INFO | [2024-05-16 21:30:29] 2024-05-16 19:30:13,939 | INFO | executing command: ls -lF /scratch/boinc/var/slot52/slots/1 [2024-05-16 21:30:29] 2024-05-16 19:30:13,966 | INFO | queue jobs had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,966 | INFO | queue payloads had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,966 | INFO | queue data_in had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,966 | INFO | queue data_out had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue current_data_in had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue validated_jobs had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue validated_payloads had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue monitored_payloads had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue finished_jobs had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue finished_payloads had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue finished_data_in had 1 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue finished_data_out had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue failed_jobs had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue failed_payloads had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue failed_data_in had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,967 | INFO | queue failed_data_out had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,968 | INFO | queue completed_jobs had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,968 | INFO | queue completed_jobids has 1 job(s) [2024-05-16 21:30:29] 2024-05-16 19:30:13,968 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,968 | INFO | queue messages had 0 job(s) [purged] [2024-05-16 21:30:29] 2024-05-16 19:30:13,968 | INFO | job 6199068286 has completed (purged errors) [2024-05-16 21:30:29] 2024-05-16 19:30:13,968 | INFO | overall cleanup function is called [2024-05-16 21:30:29] 2024-05-16 19:30:14,982 | INFO | --- collectZombieJob: --- 10, [2708336] [2024-05-16 21:30:29] 2024-05-16 19:30:14,983 | INFO | zombie collector waiting for pid 2708336 [2024-05-16 21:30:29] 2024-05-16 19:30:14,983 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2024-05-16 21:30:29] 2024-05-16 19:30:15,987 | INFO | collected zombie processes [2024-05-16 21:30:29] 2024-05-16 19:30:15,988 | INFO | will now attempt to kill all subprocesses of pid=2708336 [2024-05-16 21:30:29] 2024-05-16 19:30:16,206 | INFO | process IDs to be killed: [2708336] (in reverse order) [2024-05-16 21:30:29] 2024-05-16 19:30:16,338 | WARNING | found no corresponding commands to process id(s) [2024-05-16 21:30:29] 2024-05-16 19:30:16,339 | INFO | Do not look for orphan processes in BOINC jobs [2024-05-16 21:30:29] 2024-05-16 19:30:16,347 | INFO | did not find any defunct processes belonging to 2708336 [2024-05-16 21:30:29] 2024-05-16 19:30:16,354 | INFO | did not find any defunct processes belonging to 2708336 [2024-05-16 21:30:29] 2024-05-16 19:30:16,355 | INFO | ready for new job [2024-05-16 21:30:29] 2024-05-16 19:30:16,355 | INFO | pilot has finished with previous job - re-establishing logging [2024-05-16 21:30:29] 2024-05-16 19:30:16,367 | INFO | ************************************** [2024-05-16 21:30:29] 2024-05-16 19:30:16,367 | INFO | *** PanDA Pilot version 3.7.3.84 *** [2024-05-16 21:30:29] 2024-05-16 19:30:16,367 | INFO | ************************************** [2024-05-16 21:30:29] 2024-05-16 19:30:16,367 | INFO | [2024-05-16 21:30:29] 2024-05-16 19:30:16,370 | INFO | architecture information: [2024-05-16 21:30:29] 2024-05-16 19:30:16,371 | INFO | executing command: cat /etc/os-release [2024-05-16 21:30:29] 2024-05-16 19:30:16,387 | INFO | cat /etc/os-release: [2024-05-16 21:30:29] NAME="CentOS Linux" [2024-05-16 21:30:29] VERSION="7 (Core)" [2024-05-16 21:30:29] ID="centos" [2024-05-16 21:30:29] ID_LIKE="rhel fedora" [2024-05-16 21:30:29] VERSION_ID="7" [2024-05-16 21:30:29] PRETTY_NAME="CentOS Linux 7 (Core)" [2024-05-16 21:30:29] ANSI_COLOR="0;31" [2024-05-16 21:30:29] CPE_NAME="cpe:/o:centos:centos:7" [2024-05-16 21:30:29] HOME_URL="https://www.centos.org/" [2024-05-16 21:30:29] BUG_REPORT_URL="https://bugs.centos.org/" [2024-05-16 21:30:29] [2024-05-16 21:30:29] CENTOS_MANTISBT_PROJECT="CentOS-7" [2024-05-16 21:30:29] CENTOS_MANTISBT_PROJECT_VERSION="7" [2024-05-16 21:30:29] REDHAT_SUPPORT_PRODUCT="centos" [2024-05-16 21:30:29] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2024-05-16 21:30:29] [2024-05-16 21:30:29] 2024-05-16 19:30:16,387 | INFO | ************************************** [2024-05-16 21:30:29] 2024-05-16 19:30:16,890 | INFO | executing command: df -mP /scratch/boinc/var/slot52/slots/1 [2024-05-16 21:30:29] 2024-05-16 19:30:16,908 | INFO | sufficient remaining disk space (553396469760 B) [2024-05-16 21:30:29] 2024-05-16 19:30:16,908 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2024-05-16 21:30:29] 2024-05-16 19:30:16,908 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2024-05-16 21:30:29] 2024-05-16 19:30:16,909 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2024-05-16 21:30:29] 2024-05-16 19:30:16,909 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2024-05-16 21:30:29] 2024-05-16 19:30:16,909 | INFO | found 0 job(s) in 20 queues [2024-05-16 21:30:29] 2024-05-16 19:30:16,910 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2024-05-16 21:30:29] 2024-05-16 19:30:16,910 | WARNING | will wait for a maximum of 300 s for threads to finish [2024-05-16 21:30:29] 2024-05-16 19:30:17,075 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2024-05-16 21:30:29] 2024-05-16 19:30:17,075 | INFO | aborting loop [2024-05-16 21:30:29] 2024-05-16 19:30:17,629 | INFO | all data control threads have been joined [2024-05-16 21:30:29] 2024-05-16 19:30:17,732 | INFO | all job control threads have been joined [2024-05-16 21:30:29] 2024-05-16 19:30:17,910 | INFO | [job] retrieve thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:17,955 | INFO | [payload] failed_post thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:17,960 | INFO | all payload control threads have been joined [2024-05-16 21:30:29] 2024-05-16 19:30:18,081 | INFO | [job] job monitor thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:18,099 | INFO | [payload] execute_payloads thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:18,355 | INFO | [data] copytool_in thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:18,356 | INFO | [job] validate thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:18,406 | INFO | [job] create_data_payload thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:18,406 | INFO | [payload] run_realtimelog thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:18,588 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2024-05-16 21:30:29] 2024-05-16 19:30:18,634 | INFO | [data] control thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:18,654 | INFO | [payload] validate_pre thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:18,655 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2024-05-16 21:30:29] 2024-05-16 19:30:18,738 | INFO | [job] control thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:18,916 | INFO | [data] copytool_out thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:18,966 | INFO | [payload] control thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:19,416 | INFO | [payload] validate_post thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:19,661 | INFO | [job] queue monitor thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:22,594 | INFO | [data] queue_monitor thread has finished [2024-05-16 21:30:29] 2024-05-16 19:30:23,529 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47703274857536)>', '<ExcThread(monitor, started 47703450060544)>'] [2024-05-16 21:30:29] 2024-05-16 19:30:23,940 | WARNING | job_aborted has been set - aborting pilot monitoring [2024-05-16 21:30:29] 2024-05-16 19:30:23,941 | INFO | [monitor] control thread has ended [2024-05-16 21:30:29] 2024-05-16 19:30:28,554 | INFO | all workflow threads have been joined [2024-05-16 21:30:29] 2024-05-16 19:30:28,554 | INFO | end of generic workflow (traces error code: 0) [2024-05-16 21:30:29] 2024-05-16 19:30:28,554 | INFO | traces error code: 0 [2024-05-16 21:30:29] 2024-05-16 19:30:28,555 | INFO | pilot has finished (exit code=0, shell exit code=0) [2024-05-16 21:30:29] 2024-05-16 19:30:28,669 [wrapper] ==== pilot stdout END ==== [2024-05-16 21:30:29] 2024-05-16 19:30:28,672 [wrapper] ==== wrapper stdout RESUME ==== [2024-05-16 21:30:29] 2024-05-16 19:30:28,675 [wrapper] pilotpid: 2700658 [2024-05-16 21:30:29] 2024-05-16 19:30:28,677 [wrapper] Pilot exit status: 0 [2024-05-16 21:30:29] 2024-05-16 19:30:28,736 [wrapper] pandaids: 6199068286 6199068286 [2024-05-16 21:30:29] 2024-05-16 19:30:28,836 [wrapper] cleanup: SIGTERM to supervisor_pilot 220805 2700659 [2024-05-16 21:30:29] 2024-05-16 19:30:28,838 [wrapper] Test setup, not cleaning [2024-05-16 21:30:29] 2024-05-16 19:30:28,840 [wrapper] ==== wrapper stdout END ==== [2024-05-16 21:30:29] 2024-05-16 19:30:28,842 [wrapper] ==== wrapper stderr END ==== [2024-05-16 21:30:29] 2024-05-16 19:30:28,847 [wrapper] apfmon messages muted [2024-05-16 21:30:29] *** Error codes and diagnostics *** [2024-05-16 21:30:29] "exeErrorCode": 0, [2024-05-16 21:30:29] "exeErrorDiag": "", [2024-05-16 21:30:29] "pilotErrorCode": 0, [2024-05-16 21:30:29] "pilotErrorDiag": "", [2024-05-16 21:30:29] *** Listing of results directory *** [2024-05-16 21:30:29] total 2953908 [2024-05-16 21:30:29] drwx------ 4 boinc boinc 4096 Apr 30 14:00 pilot3 [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 468928 May 8 14:37 pilot3.tar.gz [2024-05-16 21:30:29] -rwx------ 1 boinc boinc 32251 May 8 14:46 runpilot2-wrapper.sh [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 5633 May 8 14:46 queuedata.json [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 100 May 14 01:02 wrapper_26015_x86_64-pc-linux-gnu [2024-05-16 21:30:29] -rwxr-xr-x 1 boinc boinc 7986 May 14 01:02 run_atlas [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 105 May 14 01:02 job.xml [2024-05-16 21:30:29] -rw-r--r-- 3 boinc boinc 325800191 May 14 01:02 EVNT.38734051._000599.pool.root.1 [2024-05-16 21:30:29] -rw-r--r-- 3 boinc boinc 325800191 May 14 01:02 ATLAS.root_0 [2024-05-16 21:30:29] -rw-r--r-- 2 boinc boinc 17537 May 14 01:02 start_atlas.sh [2024-05-16 21:30:29] drwxrwx--x 2 boinc boinc 4096 May 14 01:02 shared [2024-05-16 21:30:29] -rw-r--r-- 2 boinc boinc 481748 May 14 01:02 input.tar.gz [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 0 May 14 01:02 boinc_lockfile [2024-05-16 21:30:29] -rw------- 1 boinc boinc 1319809 May 14 01:02 cric_ddmendpoints.json [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 2851 May 15 05:16 pandaJob.out [2024-05-16 21:30:29] -rw------- 1 boinc boinc 424 May 15 05:16 setup.sh.local [2024-05-16 21:30:29] -rw------- 1 boinc boinc 1008600 May 15 05:16 agis_schedconf.cvmfs.json [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 6673 May 15 07:07 init_data.xml [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 534 May 16 21:19 boinc_task_state.xml [2024-05-16 21:30:29] -rw------- 1 boinc boinc 2280657023 May 16 21:29 HITS.38734053._002207.pool.root.1 [2024-05-16 21:30:29] -rw------- 1 boinc boinc 1086 May 16 21:29 memory_monitor_summary.json [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 30 May 16 21:30 wrapper_checkpoint.txt [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 8192 May 16 21:30 boinc_mmap_file [2024-05-16 21:30:29] -rw------- 1 boinc boinc 97 May 16 21:30 pilot_heartbeat.json [2024-05-16 21:30:29] -rw------- 1 boinc boinc 0 May 16 21:30 agis_ddmendpoints.agis.ALL.json [2024-05-16 21:30:29] -rw------- 1 boinc boinc 7491816 May 16 21:30 log.38734053._002207.job.log.tgz.1 [2024-05-16 21:30:29] -rw------- 1 boinc boinc 27514 May 16 21:30 heartbeat.json [2024-05-16 21:30:29] -rw------- 1 boinc boinc 4348 May 16 21:30 pilotlog.txt [2024-05-16 21:30:29] -rw------- 1 boinc boinc 36991571 May 16 21:30 log.38734053._002207.job.log.1 [2024-05-16 21:30:29] -rw------- 1 boinc boinc 353 May 16 21:30 output.list [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 620 May 16 21:30 runtime_log [2024-05-16 21:30:29] -rw------- 1 boinc boinc 44523520 May 16 21:30 result.tar.gz [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 11488 May 16 21:30 runtime_log.err [2024-05-16 21:30:29] -rw------- 1 boinc boinc 784 May 16 21:30 E0KMDmervO5nsSi4apGgGQJmABFKDmABFKDm4ySLDmQKIKDme7ob5n.diag [2024-05-16 21:30:29] -rw-r--r-- 1 boinc boinc 23663 May 16 21:30 stderr.txt [2024-05-16 21:30:29] HITS file was successfully produced: [2024-05-16 21:30:29] -rw------- 1 boinc boinc 2280657023 May 16 21:29 shared/HITS.pool.root.1 [2024-05-16 21:30:29] *** Contents of shared directory: *** [2024-05-16 21:30:29] total 2589356 [2024-05-16 21:30:29] -rw-r--r-- 3 boinc boinc 325800191 May 14 01:02 ATLAS.root_0 [2024-05-16 21:30:29] -rw-r--r-- 2 boinc boinc 17537 May 14 01:02 start_atlas.sh [2024-05-16 21:30:29] -rw-r--r-- 2 boinc boinc 481748 May 14 01:02 input.tar.gz [2024-05-16 21:30:29] -rw------- 1 boinc boinc 2280657023 May 16 21:29 HITS.pool.root.1 [2024-05-16 21:30:29] -rw------- 1 boinc boinc 44523520 May 16 21:30 result.tar.gz 21:30:31 (2696320): run_atlas exited; CPU time 571394.381398 21:30:31 (2696320): called boinc_finish(0) </stderr_txt> <message> upload failure: <file_xfer_error> <file_name>E0KMDmervO5nsSi4apGgGQJmABFKDmABFKDm4ySLDmQKIKDme7ob5n_0_r356054862_ATLAS_hits</file_name> <error_code>-131 (file size too big)</error_code> </file_xfer_error> </message> ]]>
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