Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:31:39 (426590): wrapper (7.7.26015): starting
17:31:39 (426590): wrapper: running run_atlas (--nthreads 4)
[2024-05-14 17:31:39] Arguments: --nthreads 4
[2024-05-14 17:31:39] Threads: 4
[2024-05-14 17:31:39] Checking for CVMFS
[2024-05-14 17:31:39] No cvmfs_config command found, will try listing directly
[2024-05-14 17:31:39] CVMFS is ok
[2024-05-14 17:31:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-14 17:31:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-14 17:31:39] Further information can be found at the LHC@home message board.
[2024-05-14 17:31:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-14 17:31:39] Checking for apptainer binary...
[2024-05-14 17:31:39] which: no apptainer in ((null))
[2024-05-14 17:31:39] apptainer is not installed, using version from CVMFS
[2024-05-14 17:31:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-14 17:31:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-14 17:31:40] apptainer works
[2024-05-14 17:31:40] Set ATHENA_PROC_NUMBER=4
[2024-05-14 17:31:40] Set ATHENA_CORE_NUMBER=4
[2024-05-14 17:31:40] Starting ATLAS job with PandaID=6198694047
[2024-05-14 17:31:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-15 11:22:21]  *** The last 200 lines of the pilot log: ***
[2024-05-15 11:22:21] 2024-05-15 09:21:55,165 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-15 11:22:21] 2024-05-15 09:21:55,218 | INFO     | job 6198694047 has state=finished
[2024-05-15 11:22:21] 2024-05-15 09:21:55,218 | INFO     | preparing for final server update for job 6198694047 in state='finished'
[2024-05-15 11:22:21] 2024-05-15 09:21:55,219 | INFO     | this job has now completed (state=finished)
[2024-05-15 11:22:21] 2024-05-15 09:21:55,219 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-15 11:22:21] 2024-05-15 09:21:55,219 | INFO     | job 6198694047 has finished - writing final server update
[2024-05-15 11:22:21] 2024-05-15 09:21:55,219 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_25373/.job.ad'
[2024-05-15 11:22:21] 2024-05-15 09:21:55,219 | INFO     | total number of processed events: 2050 (read)
[2024-05-15 11:22:21] 2024-05-15 09:21:55,226 | INFO     | executing command: lscpu
[2024-05-15 11:22:21] 2024-05-15 09:21:55,274 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-05-15 11:22:21] 2024-05-15 09:21:55,275 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-15 11:22:21] 2024-05-15 09:21:55,318 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-15 11:22:21] 2024-05-15 09:21:58,681 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-15 11:22:21] 2024-05-15 09:21:58,683 | INFO     | using path: /scratch/boinc/var/slot120/slots/1/PanDA_Pilot-6198694047/memory_monitor_summary.json (trf name=prmon)
[2024-05-15 11:22:21] 2024-05-15 09:21:58,687 | INFO     | extracted standard info from prmon json
[2024-05-15 11:22:21] 2024-05-15 09:21:58,687 | INFO     | extracted standard memory fields from prmon json
[2024-05-15 11:22:21] 2024-05-15 09:21:58,687 | WARNING  | GPU info not found in prmon json
[2024-05-15 11:22:21] 2024-05-15 09:21:58,703 | INFO     | fitting pss+swap vs Time
[2024-05-15 11:22:21] 2024-05-15 09:21:58,704 | INFO     | model: linear, x: [1715700769.0, 1715700830.0, 1715700891.0, 1715700952.0, 1715701013.0, 1715701074.0, 1715701135.0, 1715701196.0, 1715701257.0, 1715701318.0, 1715
[2024-05-15 11:22:21] 2024-05-15 09:21:58,705 | INFO     | sum of square deviations: 361015003323.0
[2024-05-15 11:22:21] 2024-05-15 09:21:58,718 | INFO     | sum of deviations: 1849161254852.0
[2024-05-15 11:22:21] 2024-05-15 09:21:58,718 | INFO     | mean x: 1715732824.5
[2024-05-15 11:22:21] 2024-05-15 09:21:58,718 | INFO     | mean y: 2643191.4448669204
[2024-05-15 11:22:21] 2024-05-15 09:21:58,718 | INFO     | -- intersect: -8785541879.92349
[2024-05-15 11:22:21] 2024-05-15 09:21:58,718 | INFO     | intersect: -8785541879.92349
[2024-05-15 11:22:21] 2024-05-15 09:21:58,719 | INFO     | chi2: 13.586896678456988
[2024-05-15 11:22:21] 2024-05-15 09:21:58,720 | INFO     | model: linear, x: [1715700769.0, 1715700830.0, 1715700891.0, 1715700952.0, 1715701013.0, 1715701074.0, 1715701135.0, 1715701196.0, 1715701257.0, 1715701318.0, 1715
[2024-05-15 11:22:21] 2024-05-15 09:21:58,720 | INFO     | sum of square deviations: 355891874708.0
[2024-05-15 11:22:21] 2024-05-15 09:21:58,731 | INFO     | sum of deviations: 2152846563088.0002
[2024-05-15 11:22:21] 2024-05-15 09:21:58,731 | INFO     | mean x: 1715732672.0
[2024-05-15 11:22:21] 2024-05-15 09:21:58,731 | INFO     | mean y: 2652232.374403056
[2024-05-15 11:22:21] 2024-05-15 09:21:58,731 | INFO     | -- intersect: -10376087628.21832
[2024-05-15 11:22:21] 2024-05-15 09:21:58,731 | INFO     | intersect: -10376087628.21832
[2024-05-15 11:22:21] 2024-05-15 09:21:58,731 | INFO     | chi2: 10.926508097950908
[2024-05-15 11:22:21] 2024-05-15 09:21:58,731 | INFO     | current chi2=10.926508097950908 (change=19.580546194366217 %)
[2024-05-15 11:22:21] 2024-05-15 09:21:58,732 | INFO     | right removable region: 1046
[2024-05-15 11:22:21] 2024-05-15 09:21:58,732 | INFO     | model: linear, x: [1715701074.0, 1715701135.0, 1715701196.0, 1715701257.0, 1715701318.0, 1715701379.0, 1715701440.0, 1715701501.0, 1715701562.0, 1715701623.0, 1715
[2024-05-15 11:22:21] 2024-05-15 09:21:58,732 | INFO     | sum of square deviations: 355891874708.0
[2024-05-15 11:22:21] 2024-05-15 09:21:58,742 | INFO     | sum of deviations: 1525658941093.0
[2024-05-15 11:22:21] 2024-05-15 09:21:58,743 | INFO     | mean x: 1715732977.0
[2024-05-15 11:22:21] 2024-05-15 09:21:58,743 | INFO     | mean y: 2652817.7306590257
[2024-05-15 11:22:21] 2024-05-15 09:21:58,743 | INFO     | -- intersect: -7352455693.908872
[2024-05-15 11:22:21] 2024-05-15 09:21:58,743 | INFO     | intersect: -7352455693.908872
[2024-05-15 11:22:21] 2024-05-15 09:21:58,743 | INFO     | chi2: 10.546437811792462
[2024-05-15 11:22:21] 2024-05-15 09:21:58,743 | INFO     | current chi2=10.546437811792462 (change=22.3778758212344 %)
[2024-05-15 11:22:21] 2024-05-15 09:21:58,744 | INFO     | left removable region: 10
[2024-05-15 11:22:21] 2024-05-15 09:21:58,744 | INFO     | model: linear, x: [1715701379.0, 1715701440.0, 1715701501.0, 1715701562.0, 1715701623.0, 1715701684.0, 1715701745.0, 1715701806.0, 1715701867.0, 1715701928.0, 1715
[2024-05-15 11:22:21] 2024-05-15 09:21:58,744 | INFO     | sum of square deviations: 344792083335.0
[2024-05-15 11:22:21] 2024-05-15 09:21:58,755 | INFO     | sum of deviations: 1638611892104.4998
[2024-05-15 11:22:21] 2024-05-15 09:21:58,755 | INFO     | mean x: 1715732946.5
[2024-05-15 11:22:21] 2024-05-15 09:21:58,755 | INFO     | mean y: 2672334.027992278
[2024-05-15 11:22:21] 2024-05-15 09:21:58,755 | INFO     | -- intersect: -8151286372.381219
[2024-05-15 11:22:21] 2024-05-15 09:21:58,755 | INFO     | intersect: -8151286372.381219
[2024-05-15 11:22:21] 2024-05-15 09:21:58,755 | INFO     | chi2: 5.113584751303579
[2024-05-15 11:22:21] 2024-05-15 09:21:58,756 | INFO     | -- intersect: -8151286372.381219
[2024-05-15 11:22:21] 2024-05-15 09:21:58,756 | INFO     | current memory leak: 4.75 B/s (using 1036 data points, chi2=5.11)
[2024-05-15 11:22:21] 2024-05-15 09:21:58,756 | INFO     | ..............................
[2024-05-15 11:22:21] 2024-05-15 09:21:58,756 | INFO     | . Timing measurements:
[2024-05-15 11:22:21] 2024-05-15 09:21:58,756 | INFO     | . get job = 0 s
[2024-05-15 11:22:21] 2024-05-15 09:21:58,756 | INFO     | . initial setup = 1 s
[2024-05-15 11:22:21] 2024-05-15 09:21:58,756 | INFO     | . payload setup = 20 s
[2024-05-15 11:22:21] 2024-05-15 09:21:58,756 | INFO     | . stage-in = 0 s
[2024-05-15 11:22:21] 2024-05-15 09:21:58,756 | INFO     | . payload execution = 64144 s
[2024-05-15 11:22:21] 2024-05-15 09:21:58,757 | INFO     | . stage-out = 1 s
[2024-05-15 11:22:21] 2024-05-15 09:21:58,757 | INFO     | . log creation = 0 s
[2024-05-15 11:22:21] 2024-05-15 09:21:58,757 | INFO     | ..............................
[2024-05-15 11:22:21] 2024-05-15 09:21:58,886 | WARNING  | process 439985 is no longer using CPU - aborting
[2024-05-15 11:22:21] 2024-05-15 09:21:58,886 | INFO     | aborting job monitoring since job object (job id=6198694047) has expired
[2024-05-15 11:22:21] 2024-05-15 09:21:59,206 | INFO     | 
[2024-05-15 11:22:21] 2024-05-15 09:21:59,206 | INFO     | job summary report
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | --------------------------------------------------
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | PanDA job id: 6198694047
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | task id: 38734053
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | errors: (none)
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | pilot state: finished 
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | transexitcode: 0
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | exeerrorcode: 0
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | exeerrordiag: 
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | exitcode: 0
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | exitmsg: OK
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | cpuconsumptiontime: 249962 s
[2024-05-15 11:22:21] 2024-05-15 09:21:59,207 | INFO     | nevents: 2050
[2024-05-15 11:22:21] 2024-05-15 09:21:59,208 | INFO     | neventsw: 0
[2024-05-15 11:22:21] 2024-05-15 09:21:59,208 | INFO     | pid: 439985
[2024-05-15 11:22:21] 2024-05-15 09:21:59,208 | INFO     | pgrp: 439985
[2024-05-15 11:22:21] 2024-05-15 09:21:59,208 | INFO     | corecount: 4
[2024-05-15 11:22:21] 2024-05-15 09:21:59,208 | INFO     | event service: False
[2024-05-15 11:22:21] 2024-05-15 09:21:59,208 | INFO     | sizes: {0: 2385967, 1: 2386166, 10: 2386372, 11: 2386400, 64168: 2459665, 64169: 2459664, 64172: 2468832, 64174: 2468888, 64178: 2469110}
[2024-05-15 11:22:21] 2024-05-15 09:21:59,208 | INFO     | --------------------------------------------------
[2024-05-15 11:22:21] 2024-05-15 09:21:59,208 | INFO     | 
[2024-05-15 11:22:21] 2024-05-15 09:21:59,208 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/1
[2024-05-15 11:22:21] 2024-05-15 09:21:59,233 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,233 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,233 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,233 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,235 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-15 11:22:21] 2024-05-15 09:21:59,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,235 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-15 11:22:21] 2024-05-15 09:21:59,235 | INFO     | job 6198694047 has completed (purged errors)
[2024-05-15 11:22:21] 2024-05-15 09:21:59,235 | INFO     | overall cleanup function is called
[2024-05-15 11:22:21] 2024-05-15 09:22:00,248 | INFO     | --- collectZombieJob: --- 10, [439985]
[2024-05-15 11:22:21] 2024-05-15 09:22:00,248 | INFO     | zombie collector waiting for pid 439985
[2024-05-15 11:22:21] 2024-05-15 09:22:00,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-15 11:22:21] 2024-05-15 09:22:01,253 | INFO     | collected zombie processes
[2024-05-15 11:22:21] 2024-05-15 09:22:01,253 | INFO     | will now attempt to kill all subprocesses of pid=439985
[2024-05-15 11:22:21] 2024-05-15 09:22:01,483 | INFO     | process IDs to be killed: [439985] (in reverse order)
[2024-05-15 11:22:21] 2024-05-15 09:22:01,675 | WARNING  | found no corresponding commands to process id(s)
[2024-05-15 11:22:21] 2024-05-15 09:22:01,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-15 11:22:21] 2024-05-15 09:22:01,686 | INFO     | did not find any defunct processes belonging to 439985
[2024-05-15 11:22:21] 2024-05-15 09:22:01,694 | INFO     | did not find any defunct processes belonging to 439985
[2024-05-15 11:22:21] 2024-05-15 09:22:01,694 | INFO     | ready for new job
[2024-05-15 11:22:21] 2024-05-15 09:22:01,694 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-15 11:22:21] 2024-05-15 09:22:01,698 | INFO     | **************************************
[2024-05-15 11:22:21] 2024-05-15 09:22:01,699 | INFO     | ***  PanDA Pilot version 3.7.3.84  ***
[2024-05-15 11:22:21] 2024-05-15 09:22:01,699 | INFO     | **************************************
[2024-05-15 11:22:21] 2024-05-15 09:22:01,699 | INFO     | 
[2024-05-15 11:22:21] 2024-05-15 09:22:01,703 | INFO     | architecture information:
[2024-05-15 11:22:21] 2024-05-15 09:22:01,703 | INFO     | executing command: cat /etc/os-release
[2024-05-15 11:22:21] 2024-05-15 09:22:01,721 | INFO     | cat /etc/os-release:
[2024-05-15 11:22:21] NAME="CentOS Linux"
[2024-05-15 11:22:21] VERSION="7 (Core)"
[2024-05-15 11:22:21] ID="centos"
[2024-05-15 11:22:21] ID_LIKE="rhel fedora"
[2024-05-15 11:22:21] VERSION_ID="7"
[2024-05-15 11:22:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-15 11:22:21] ANSI_COLOR="0;31"
[2024-05-15 11:22:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-15 11:22:21] HOME_URL="https://www.centos.org/"
[2024-05-15 11:22:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-15 11:22:21] 
[2024-05-15 11:22:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-15 11:22:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-15 11:22:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-15 11:22:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-15 11:22:21] 
[2024-05-15 11:22:21] 2024-05-15 09:22:01,722 | INFO     | **************************************
[2024-05-15 11:22:21] 2024-05-15 09:22:02,224 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/1
[2024-05-15 11:22:21] 2024-05-15 09:22:02,247 | INFO     | sufficient remaining disk space (3010763685888 B)
[2024-05-15 11:22:21] 2024-05-15 09:22:02,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-15 11:22:21] 2024-05-15 09:22:02,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-15 11:22:21] 2024-05-15 09:22:02,248 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-15 11:22:21] 2024-05-15 09:22:02,248 | INFO     | found 0 job(s) in 20 queues
[2024-05-15 11:22:21] 2024-05-15 09:22:02,248 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-15 11:22:21] 2024-05-15 09:22:02,248 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-15 11:22:21] 2024-05-15 09:22:02,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:22:21] 2024-05-15 09:22:02,394 | INFO     | aborting loop
[2024-05-15 11:22:21] 2024-05-15 09:22:02,568 | INFO     | all job control threads have been joined
[2024-05-15 11:22:21] 2024-05-15 09:22:02,726 | INFO     | all data control threads have been joined
[2024-05-15 11:22:21] 2024-05-15 09:22:03,083 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-15 11:22:21] 2024-05-15 09:22:03,251 | INFO     | [job] retrieve thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:03,300 | INFO     | [payload] validate_post thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:03,398 | INFO     | [job] job monitor thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:03,399 | INFO     | [data] copytool_in thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:03,413 | INFO     | all payload control threads have been joined
[2024-05-15 11:22:21] 2024-05-15 09:22:03,473 | INFO     | [job] create_data_payload thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:03,573 | INFO     | [job] control thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:03,732 | INFO     | [data] control thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:03,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-15 11:22:21] 2024-05-15 09:22:03,938 | INFO     | [payload] execute_payloads thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:04,100 | INFO     | [job] validate thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:04,243 | INFO     | [payload] failed_post thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:04,418 | INFO     | [payload] control thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:04,693 | INFO     | [payload] validate_pre thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:04,832 | INFO     | [job] queue monitor thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:05,089 | INFO     | [data] copytool_out thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:05,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-15 11:22:21] 2024-05-15 09:22:09,737 | INFO     | [data] queue_monitor thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:12,478 | INFO     | job.realtimelogging is not enabled
[2024-05-15 11:22:21] 2024-05-15 09:22:13,482 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-15 11:22:21] 2024-05-15 09:22:15,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47963659154496)>', '<ExcThread(monitor, started 47963834607360)>']
[2024-05-15 11:22:21] 2024-05-15 09:22:16,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-15 11:22:21] 2024-05-15 09:22:16,303 | INFO     | [monitor] control thread has ended
[2024-05-15 11:22:21] 2024-05-15 09:22:20,416 | INFO     | all workflow threads have been joined
[2024-05-15 11:22:21] 2024-05-15 09:22:20,416 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-15 11:22:21] 2024-05-15 09:22:20,416 | INFO     | traces error code: 0
[2024-05-15 11:22:21] 2024-05-15 09:22:20,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-15 11:22:21] 2024-05-15 09:22:20,489 [wrapper] ==== pilot stdout END ====
[2024-05-15 11:22:21] 2024-05-15 09:22:20,491 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-15 11:22:21] 2024-05-15 09:22:20,492 [wrapper] pilotpid: 431394
[2024-05-15 11:22:21] 2024-05-15 09:22:20,494 [wrapper] Pilot exit status: 0
[2024-05-15 11:22:21] 2024-05-15 09:22:20,502 [wrapper] pandaids: 6198694047
[2024-05-15 11:22:21] 2024-05-15 09:22:20,585 [wrapper] cleanup: SIGTERM to supervisor_pilot 2705798 431395
[2024-05-15 11:22:21] 2024-05-15 09:22:20,588 [wrapper] Test setup, not cleaning
[2024-05-15 11:22:21] 2024-05-15 09:22:20,590 [wrapper] ==== wrapper stdout END ====
[2024-05-15 11:22:21] 2024-05-15 09:22:20,592 [wrapper] ==== wrapper stderr END ====
[2024-05-15 11:22:21] 2024-05-15 09:22:20,596 [wrapper] apfmon messages muted
[2024-05-15 11:22:21]  *** Error codes and diagnostics ***
[2024-05-15 11:22:21]     "exeErrorCode": 0,
[2024-05-15 11:22:21]     "exeErrorDiag": "",
[2024-05-15 11:22:21]     "pilotErrorCode": 0,
[2024-05-15 11:22:21]     "pilotErrorDiag": "",
[2024-05-15 11:22:21]  *** Listing of results directory ***
[2024-05-15 11:22:21] total 1557436
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc     468928 May  8 05:39 pilot3.tar.gz
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc       5634 May  8 05:41 queuedata.json
[2024-05-15 11:22:21] -rwx------ 1 boinc boinc      32251 May  8 05:41 runpilot2-wrapper.sh
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc        100 May 14 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-15 11:22:21] -rwxr-xr-x 1 boinc boinc       7986 May 14 17:31 run_atlas
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc        105 May 14 17:31 job.xml
[2024-05-15 11:22:21] -rw-r--r-- 2 boinc boinc  327024960 May 14 17:31 EVNT.38734051._000147.pool.root.1
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc       6644 May 14 17:31 init_data.xml
[2024-05-15 11:22:21] -rw-r--r-- 2 boinc boinc      17539 May 14 17:31 start_atlas.sh
[2024-05-15 11:22:21] drwxrwx--x 2 boinc boinc       4096 May 14 17:31 shared
[2024-05-15 11:22:21] -rw-r--r-- 2 boinc boinc     481742 May 14 17:31 input.tar.gz
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc          0 May 14 17:31 boinc_lockfile
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc       2851 May 14 17:31 pandaJob.out
[2024-05-15 11:22:21] -rw------- 1 boinc boinc        424 May 14 17:31 setup.sh.local
[2024-05-15 11:22:21] -rw------- 1 boinc boinc    1008542 May 14 17:31 agis_schedconf.cvmfs.json
[2024-05-15 11:22:21] -rw------- 1 boinc boinc    1319809 May 14 17:31 cric_ddmendpoints.json
[2024-05-15 11:22:21] drwx------ 4 boinc boinc       4096 May 14 17:32 pilot3
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc        532 May 15 11:14 boinc_task_state.xml
[2024-05-15 11:22:21] -rw------- 1 boinc boinc 1239074853 May 15 11:21 HITS.38734053._000747.pool.root.1
[2024-05-15 11:22:21] -rw------- 1 boinc boinc         95 May 15 11:21 pilot_heartbeat.json
[2024-05-15 11:22:21] -rw------- 1 boinc boinc       1054 May 15 11:21 memory_monitor_summary.json
[2024-05-15 11:22:21] -rw------- 1 boinc boinc          0 May 15 11:21 agis_ddmendpoints.agis.ALL.json
[2024-05-15 11:22:21] -rw------- 1 boinc boinc    1970120 May 15 11:21 log.38734053._000747.job.log.tgz.1
[2024-05-15 11:22:21] -rw------- 1 boinc boinc      27428 May 15 11:21 heartbeat.json
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc       8192 May 15 11:22 boinc_mmap_file
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc         29 May 15 11:22 wrapper_checkpoint.txt
[2024-05-15 11:22:21] -rw------- 1 boinc boinc       4422 May 15 11:22 pilotlog.txt
[2024-05-15 11:22:21] -rw------- 1 boinc boinc   10604975 May 15 11:22 log.38734053._000747.job.log.1
[2024-05-15 11:22:21] -rw------- 1 boinc boinc        353 May 15 11:22 output.list
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc        620 May 15 11:22 runtime_log
[2024-05-15 11:22:21] -rw------- 1 boinc boinc   12615680 May 15 11:22 result.tar.gz
[2024-05-15 11:22:21] -rw------- 1 boinc boinc        667 May 15 11:22 wKQODmZMnO5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm0OFKDmjmyEBn.diag
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc      11430 May 15 11:22 runtime_log.err
[2024-05-15 11:22:21] -rw-r--r-- 1 boinc boinc      21670 May 15 11:22 stderr.txt
[2024-05-15 11:22:21] HITS file was successfully produced:
[2024-05-15 11:22:21] -rw------- 1 boinc boinc 1239074853 May 15 11:21 shared/HITS.pool.root.1
[2024-05-15 11:22:21]  *** Contents of shared directory: ***
[2024-05-15 11:22:21] total 1542220
[2024-05-15 11:22:21] -rw-r--r-- 2 boinc boinc  327024960 May 14 17:31 ATLAS.root_0
[2024-05-15 11:22:21] -rw-r--r-- 2 boinc boinc      17539 May 14 17:31 start_atlas.sh
[2024-05-15 11:22:21] -rw-r--r-- 2 boinc boinc     481742 May 14 17:31 input.tar.gz
[2024-05-15 11:22:21] -rw------- 1 boinc boinc 1239074853 May 15 11:21 HITS.pool.root.1
[2024-05-15 11:22:21] -rw------- 1 boinc boinc   12615680 May 15 11:22 result.tar.gz
11:22:22 (426590): run_atlas exited; CPU time 246387.706744
11:22:22 (426590): called boinc_finish(0)

</stderr_txt>
]]>

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