Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:59:49 (1364284): wrapper (7.7.26015): starting
06:59:49 (1364284): wrapper: running run_atlas (--nthreads 4)
[2024-05-13 06:59:49] Arguments: --nthreads 4
[2024-05-13 06:59:49] Threads: 4
[2024-05-13 06:59:49] Checking for CVMFS
[2024-05-13 06:59:49] No cvmfs_config command found, will try listing directly
[2024-05-13 06:59:49] CVMFS is ok
[2024-05-13 06:59:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-13 06:59:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-13 06:59:49] Further information can be found at the LHC@home message board.
[2024-05-13 06:59:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-13 06:59:49] Checking for apptainer binary...
[2024-05-13 06:59:49] which: no apptainer in ((null))
[2024-05-13 06:59:49] apptainer is not installed, using version from CVMFS
[2024-05-13 06:59:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-13 06:59:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-13 06:59:50] apptainer works
[2024-05-13 06:59:50] Set ATHENA_PROC_NUMBER=4
[2024-05-13 06:59:50] Set ATHENA_CORE_NUMBER=4
[2024-05-13 06:59:50] Starting ATLAS job with PandaID=6198694035
[2024-05-13 06:59:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-13 23:42:21]  *** The last 200 lines of the pilot log: ***
[2024-05-13 23:42:21] 2024-05-13 21:41:56,512 | INFO     | stage-out finished correctly
[2024-05-13 23:42:21] 2024-05-13 21:41:59,602 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-13 23:42:21] 2024-05-13 21:41:59,676 | INFO     | job 6198694035 has state=finished
[2024-05-13 23:42:21] 2024-05-13 21:41:59,676 | INFO     | preparing for final server update for job 6198694035 in state='finished'
[2024-05-13 23:42:21] 2024-05-13 21:42:00,618 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-05-13 23:42:21] 2024-05-13 21:42:00,619 | INFO     | this job has now completed (state=finished)
[2024-05-13 23:42:21] 2024-05-13 21:42:00,619 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-13 23:42:21] 2024-05-13 21:42:00,619 | INFO     | job 6198694035 has finished - writing final server update
[2024-05-13 23:42:21] 2024-05-13 21:42:00,620 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_25373/.job.ad'
[2024-05-13 23:42:21] 2024-05-13 21:42:00,620 | INFO     | total number of processed events: 2050 (read)
[2024-05-13 23:42:21] 2024-05-13 21:42:00,626 | INFO     | executing command: lscpu
[2024-05-13 23:42:21] 2024-05-13 21:42:00,675 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-05-13 23:42:21] 2024-05-13 21:42:00,676 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-13 23:42:21] 2024-05-13 21:42:00,712 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-13 23:42:21] 2024-05-13 21:42:06,459 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-13 23:42:21] 2024-05-13 21:42:06,459 | INFO     | using path: /scratch/boinc/var/slot120/slots/1/PanDA_Pilot-6198694035/memory_monitor_summary.json (trf name=prmon)
[2024-05-13 23:42:21] 2024-05-13 21:42:06,464 | INFO     | extracted standard info from prmon json
[2024-05-13 23:42:21] 2024-05-13 21:42:06,464 | INFO     | extracted standard memory fields from prmon json
[2024-05-13 23:42:21] 2024-05-13 21:42:06,464 | WARNING  | GPU info not found in prmon json
[2024-05-13 23:42:21] 2024-05-13 21:42:06,477 | INFO     | fitting pss+swap vs Time
[2024-05-13 23:42:21] 2024-05-13 21:42:06,478 | INFO     | model: linear, x: [1715576427.0, 1715576488.0, 1715576549.0, 1715576610.0, 1715576671.0, 1715576732.0, 1715576793.0, 1715576854.0, 1715576915.0, 1715576976.0, 1715
[2024-05-13 23:42:21] 2024-05-13 21:42:06,478 | INFO     | sum of square deviations: 297241005722.5
[2024-05-13 23:42:21] 2024-05-13 21:42:06,488 | INFO     | sum of deviations: 1585251904784.0002
[2024-05-13 23:42:21] 2024-05-13 21:42:06,489 | INFO     | mean x: 1715606469.5
[2024-05-13 23:42:21] 2024-05-13 21:42:06,489 | INFO     | mean y: 2802852.468559838
[2024-05-13 23:42:21] 2024-05-13 21:42:06,489 | INFO     | -- intersect: -9146905200.173655
[2024-05-13 23:42:21] 2024-05-13 21:42:06,489 | INFO     | intersect: -9146905200.173655
[2024-05-13 23:42:21] 2024-05-13 21:42:06,489 | INFO     | chi2: 15.111616764021269
[2024-05-13 23:42:21] 2024-05-13 21:42:06,490 | INFO     | model: linear, x: [1715576427.0, 1715576488.0, 1715576549.0, 1715576610.0, 1715576671.0, 1715576732.0, 1715576793.0, 1715576854.0, 1715576915.0, 1715576976.0, 1715
[2024-05-13 23:42:21] 2024-05-13 21:42:06,490 | INFO     | sum of square deviations: 292741972530.0
[2024-05-13 23:42:21] 2024-05-13 21:42:06,500 | INFO     | sum of deviations: 1906976487917.9976
[2024-05-13 23:42:21] 2024-05-13 21:42:06,500 | INFO     | mean x: 1715606317.0
[2024-05-13 23:42:21] 2024-05-13 21:42:06,500 | INFO     | mean y: 2813755.7023445466
[2024-05-13 23:42:21] 2024-05-13 21:42:06,501 | INFO     | -- intersect: -11172969753.46738
[2024-05-13 23:42:21] 2024-05-13 21:42:06,501 | INFO     | intersect: -11172969753.46738
[2024-05-13 23:42:21] 2024-05-13 21:42:06,501 | INFO     | chi2: 12.093372697835251
[2024-05-13 23:42:21] 2024-05-13 21:42:06,501 | INFO     | current chi2=12.093372697835251 (change=19.973005624203306 %)
[2024-05-13 23:42:21] 2024-05-13 21:42:06,501 | INFO     | right removable region: 980
[2024-05-13 23:42:21] 2024-05-13 21:42:06,502 | INFO     | model: linear, x: [1715576732.0, 1715576793.0, 1715576854.0, 1715576915.0, 1715576976.0, 1715577037.0, 1715577098.0, 1715577159.0, 1715577220.0, 1715577281.0, 1715
[2024-05-13 23:42:21] 2024-05-13 21:42:06,502 | INFO     | sum of square deviations: 292741972530.0
[2024-05-13 23:42:21] 2024-05-13 21:42:06,512 | INFO     | sum of deviations: 1263456472407.0015
[2024-05-13 23:42:21] 2024-05-13 21:42:06,512 | INFO     | mean x: 1715606622.0
[2024-05-13 23:42:21] 2024-05-13 21:42:06,512 | INFO     | mean y: 2813756.0713557596
[2024-05-13 23:42:21] 2024-05-13 21:42:06,513 | INFO     | -- intersect: -7401639633.160618
[2024-05-13 23:42:21] 2024-05-13 21:42:06,513 | INFO     | intersect: -7401639633.160618
[2024-05-13 23:42:21] 2024-05-13 21:42:06,513 | INFO     | chi2: 12.035406337860378
[2024-05-13 23:42:21] 2024-05-13 21:42:06,513 | INFO     | current chi2=12.035406337860378 (change=20.356593700052898 %)
[2024-05-13 23:42:21] 2024-05-13 21:42:06,513 | INFO     | left removable region: 10
[2024-05-13 23:42:21] 2024-05-13 21:42:06,514 | INFO     | model: linear, x: [1715577037.0, 1715577098.0, 1715577159.0, 1715577220.0, 1715577281.0, 1715577342.0, 1715577403.0, 1715577464.0, 1715577525.0, 1715577586.0, 1715
[2024-05-13 23:42:21] 2024-05-13 21:42:06,514 | INFO     | sum of square deviations: 283004385302.5
[2024-05-13 23:42:21] 2024-05-13 21:42:06,524 | INFO     | sum of deviations: 1380547060525.0002
[2024-05-13 23:42:21] 2024-05-13 21:42:06,524 | INFO     | mean x: 1715606591.5
[2024-05-13 23:42:21] 2024-05-13 21:42:06,524 | INFO     | mean y: 2836476.925773196
[2024-05-13 23:42:21] 2024-05-13 21:42:06,524 | INFO     | -- intersect: -8366205700.215775
[2024-05-13 23:42:21] 2024-05-13 21:42:06,524 | INFO     | intersect: -8366205700.215775
[2024-05-13 23:42:21] 2024-05-13 21:42:06,525 | INFO     | chi2: 6.267140507502507
[2024-05-13 23:42:21] 2024-05-13 21:42:06,525 | INFO     | -- intersect: -8366205700.215775
[2024-05-13 23:42:21] 2024-05-13 21:42:06,525 | INFO     | current memory leak: 4.88 B/s (using 970 data points, chi2=6.27)
[2024-05-13 23:42:21] 2024-05-13 21:42:06,526 | INFO     | ..............................
[2024-05-13 23:42:21] 2024-05-13 21:42:06,526 | INFO     | . Timing measurements:
[2024-05-13 23:42:21] 2024-05-13 21:42:06,526 | INFO     | . get job = 0 s
[2024-05-13 23:42:21] 2024-05-13 21:42:06,526 | INFO     | . initial setup = 1 s
[2024-05-13 23:42:21] 2024-05-13 21:42:06,526 | INFO     | . payload setup = 9 s
[2024-05-13 23:42:21] 2024-05-13 21:42:06,526 | INFO     | . stage-in = 0 s
[2024-05-13 23:42:21] 2024-05-13 21:42:06,526 | INFO     | . payload execution = 60090 s
[2024-05-13 23:42:21] 2024-05-13 21:42:06,526 | INFO     | . stage-out = 2 s
[2024-05-13 23:42:21] 2024-05-13 21:42:06,526 | INFO     | . log creation = 0 s
[2024-05-13 23:42:21] 2024-05-13 21:42:06,526 | INFO     | ..............................
[2024-05-13 23:42:21] 2024-05-13 21:42:06,581 | INFO     | 
[2024-05-13 23:42:21] 2024-05-13 21:42:06,581 | INFO     | job summary report
[2024-05-13 23:42:21] 2024-05-13 21:42:06,581 | INFO     | --------------------------------------------------
[2024-05-13 23:42:21] 2024-05-13 21:42:06,582 | INFO     | PanDA job id: 6198694035
[2024-05-13 23:42:21] 2024-05-13 21:42:06,582 | INFO     | task id: 38734053
[2024-05-13 23:42:21] 2024-05-13 21:42:06,582 | INFO     | errors: (none)
[2024-05-13 23:42:21] 2024-05-13 21:42:06,582 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-13 23:42:21] 2024-05-13 21:42:06,582 | INFO     | pilot state: finished 
[2024-05-13 23:42:21] 2024-05-13 21:42:06,582 | INFO     | transexitcode: 0
[2024-05-13 23:42:21] 2024-05-13 21:42:06,582 | INFO     | exeerrorcode: 0
[2024-05-13 23:42:21] 2024-05-13 21:42:06,582 | INFO     | exeerrordiag: 
[2024-05-13 23:42:21] 2024-05-13 21:42:06,582 | INFO     | exitcode: 0
[2024-05-13 23:42:21] 2024-05-13 21:42:06,582 | INFO     | exitmsg: OK
[2024-05-13 23:42:21] 2024-05-13 21:42:06,583 | INFO     | cpuconsumptiontime: 233772 s
[2024-05-13 23:42:21] 2024-05-13 21:42:06,583 | INFO     | nevents: 2050
[2024-05-13 23:42:21] 2024-05-13 21:42:06,583 | INFO     | neventsw: 0
[2024-05-13 23:42:21] 2024-05-13 21:42:06,583 | INFO     | pid: 1377623
[2024-05-13 23:42:21] 2024-05-13 21:42:06,583 | INFO     | pgrp: 1377623
[2024-05-13 23:42:21] 2024-05-13 21:42:06,583 | INFO     | corecount: 4
[2024-05-13 23:42:21] 2024-05-13 21:42:06,583 | INFO     | event service: False
[2024-05-13 23:42:21] 2024-05-13 21:42:06,583 | INFO     | sizes: {0: 2386138, 1: 2386138, 4: 2386372, 11: 2386400, 60100: 2458207, 60103: 2467191, 60106: 2467375, 60113: 2467597}
[2024-05-13 23:42:21] 2024-05-13 21:42:06,583 | INFO     | --------------------------------------------------
[2024-05-13 23:42:21] 2024-05-13 21:42:06,583 | INFO     | 
[2024-05-13 23:42:21] 2024-05-13 21:42:06,583 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/1
[2024-05-13 23:42:21] 2024-05-13 21:42:06,700 | WARNING  | process 1377623 is no longer using CPU - aborting
[2024-05-13 23:42:21] 2024-05-13 21:42:06,700 | INFO     | aborting job monitoring since job object (job id=6198694035) has expired
[2024-05-13 23:42:21] 2024-05-13 21:42:06,726 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,726 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,726 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,726 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,726 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,727 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-13 23:42:21] 2024-05-13 21:42:06,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,727 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-13 23:42:21] 2024-05-13 21:42:06,727 | INFO     | job 6198694035 has completed (purged errors)
[2024-05-13 23:42:21] 2024-05-13 21:42:06,728 | INFO     | overall cleanup function is called
[2024-05-13 23:42:21] 2024-05-13 21:42:07,739 | INFO     | --- collectZombieJob: --- 10, [1377623]
[2024-05-13 23:42:21] 2024-05-13 21:42:07,739 | INFO     | zombie collector waiting for pid 1377623
[2024-05-13 23:42:21] 2024-05-13 21:42:07,739 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-13 23:42:21] 2024-05-13 21:42:08,744 | INFO     | collected zombie processes
[2024-05-13 23:42:21] 2024-05-13 21:42:08,744 | INFO     | will now attempt to kill all subprocesses of pid=1377623
[2024-05-13 23:42:21] 2024-05-13 21:42:08,987 | INFO     | process IDs to be killed: [1377623] (in reverse order)
[2024-05-13 23:42:21] 2024-05-13 21:42:09,210 | WARNING  | found no corresponding commands to process id(s)
[2024-05-13 23:42:21] 2024-05-13 21:42:09,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-13 23:42:21] 2024-05-13 21:42:09,229 | INFO     | did not find any defunct processes belonging to 1377623
[2024-05-13 23:42:21] 2024-05-13 21:42:09,243 | INFO     | did not find any defunct processes belonging to 1377623
[2024-05-13 23:42:21] 2024-05-13 21:42:09,243 | INFO     | ready for new job
[2024-05-13 23:42:21] 2024-05-13 21:42:09,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-13 23:42:21] 2024-05-13 21:42:09,248 | INFO     | **************************************
[2024-05-13 23:42:21] 2024-05-13 21:42:09,248 | INFO     | ***  PanDA Pilot version 3.7.3.84  ***
[2024-05-13 23:42:21] 2024-05-13 21:42:09,248 | INFO     | **************************************
[2024-05-13 23:42:21] 2024-05-13 21:42:09,248 | INFO     | 
[2024-05-13 23:42:21] 2024-05-13 21:42:09,252 | INFO     | architecture information:
[2024-05-13 23:42:21] 2024-05-13 21:42:09,253 | INFO     | executing command: cat /etc/os-release
[2024-05-13 23:42:21] 2024-05-13 21:42:09,274 | INFO     | cat /etc/os-release:
[2024-05-13 23:42:21] NAME="CentOS Linux"
[2024-05-13 23:42:21] VERSION="7 (Core)"
[2024-05-13 23:42:21] ID="centos"
[2024-05-13 23:42:21] ID_LIKE="rhel fedora"
[2024-05-13 23:42:21] VERSION_ID="7"
[2024-05-13 23:42:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-13 23:42:21] ANSI_COLOR="0;31"
[2024-05-13 23:42:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-13 23:42:21] HOME_URL="https://www.centos.org/"
[2024-05-13 23:42:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-13 23:42:21] 
[2024-05-13 23:42:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-13 23:42:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-13 23:42:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-13 23:42:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-13 23:42:21] 
[2024-05-13 23:42:21] 2024-05-13 21:42:09,274 | INFO     | **************************************
[2024-05-13 23:42:21] 2024-05-13 21:42:09,778 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/1
[2024-05-13 23:42:21] 2024-05-13 21:42:09,805 | INFO     | sufficient remaining disk space (3021222182912 B)
[2024-05-13 23:42:21] 2024-05-13 21:42:09,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-13 23:42:21] 2024-05-13 21:42:09,805 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-13 23:42:21] 2024-05-13 21:42:09,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-13 23:42:21] 2024-05-13 21:42:10,019 | INFO     | found 0 job(s) in 20 queues
[2024-05-13 23:42:21] 2024-05-13 21:42:10,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-13 23:42:21] 2024-05-13 21:42:10,020 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-13 23:42:21] 2024-05-13 21:42:10,035 | INFO     | all job control threads have been joined
[2024-05-13 23:42:21] 2024-05-13 21:42:10,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-13 23:42:21] 2024-05-13 21:42:10,212 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-13 23:42:21] 2024-05-13 21:42:10,213 | INFO     | aborting loop
[2024-05-13 23:42:21] 2024-05-13 21:42:10,270 | INFO     | all payload control threads have been joined
[2024-05-13 23:42:21] 2024-05-13 21:42:10,677 | INFO     | all data control threads have been joined
[2024-05-13 23:42:21] 2024-05-13 21:42:10,810 | INFO     | [job] retrieve thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:11,021 | INFO     | [job] validate thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:11,040 | INFO     | [job] control thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:11,119 | INFO     | [payload] validate_post thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:11,217 | INFO     | [job] job monitor thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:11,275 | INFO     | [payload] control thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:11,493 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:11,512 | INFO     | [payload] execute_payloads thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:11,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-13 23:42:21] 2024-05-13 21:42:11,682 | INFO     | [data] control thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:11,810 | INFO     | [data] copytool_out thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:11,871 | INFO     | [data] copytool_in thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:12,057 | INFO     | [payload] validate_pre thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:12,083 | INFO     | [job] create_data_payload thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:12,324 | INFO     | [payload] failed_post thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:12,594 | INFO     | [job] queue monitor thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:14,194 | INFO     | [data] queue_monitor thread has finished
[2024-05-13 23:42:21] 2024-05-13 21:42:15,674 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47297278067776)>', '<ExcThread(monitor, started 47297453520640)>']
[2024-05-13 23:42:21] 2024-05-13 21:42:16,051 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-13 23:42:21] 2024-05-13 21:42:16,051 | INFO     | [monitor] control thread has ended
[2024-05-13 23:42:21] 2024-05-13 21:42:20,699 | INFO     | all workflow threads have been joined
[2024-05-13 23:42:21] 2024-05-13 21:42:20,699 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-13 23:42:21] 2024-05-13 21:42:20,700 | INFO     | traces error code: 0
[2024-05-13 23:42:21] 2024-05-13 21:42:20,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-13 23:42:21] 2024-05-13 21:42:20,788 [wrapper] ==== pilot stdout END ====
[2024-05-13 23:42:21] 2024-05-13 21:42:20,790 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-13 23:42:21] 2024-05-13 21:42:20,793 [wrapper] pilotpid: 1368874
[2024-05-13 23:42:21] 2024-05-13 21:42:20,796 [wrapper] Pilot exit status: 0
[2024-05-13 23:42:21] 2024-05-13 21:42:20,807 [wrapper] pandaids: 6198694035
[2024-05-13 23:42:21] 2024-05-13 21:42:20,893 [wrapper] cleanup: SIGTERM to supervisor_pilot 2234998 1368875
[2024-05-13 23:42:21] 2024-05-13 21:42:20,895 [wrapper] Test setup, not cleaning
[2024-05-13 23:42:21] 2024-05-13 21:42:20,896 [wrapper] ==== wrapper stdout END ====
[2024-05-13 23:42:21] 2024-05-13 21:42:20,898 [wrapper] ==== wrapper stderr END ====
[2024-05-13 23:42:21] 2024-05-13 21:42:20,902 [wrapper] apfmon messages muted
[2024-05-13 23:42:21]  *** Error codes and diagnostics ***
[2024-05-13 23:42:21]     "exeErrorCode": 0,
[2024-05-13 23:42:21]     "exeErrorDiag": "",
[2024-05-13 23:42:21]     "pilotErrorCode": 0,
[2024-05-13 23:42:21]     "pilotErrorDiag": "",
[2024-05-13 23:42:21]  *** Listing of results directory ***
[2024-05-13 23:42:21] total 1579300
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc     468928 May  8 05:39 pilot3.tar.gz
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc       5634 May  8 05:41 queuedata.json
[2024-05-13 23:42:21] -rwx------ 1 boinc boinc      32251 May  8 05:41 runpilot2-wrapper.sh
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc        100 May 13 06:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-13 23:42:21] -rwxr-xr-x 1 boinc boinc       7986 May 13 06:59 run_atlas
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc        105 May 13 06:59 job.xml
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc       6644 May 13 06:59 init_data.xml
[2024-05-13 23:42:21] -rw-r--r-- 2 boinc boinc  327883988 May 13 06:59 EVNT.38734051._000144.pool.root.1
[2024-05-13 23:42:21] -rw-r--r-- 2 boinc boinc      17539 May 13 06:59 start_atlas.sh
[2024-05-13 23:42:21] drwxrwx--x 2 boinc boinc       4096 May 13 06:59 shared
[2024-05-13 23:42:21] -rw-r--r-- 2 boinc boinc     481737 May 13 06:59 input.tar.gz
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc          0 May 13 06:59 boinc_lockfile
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc       2851 May 13 06:59 pandaJob.out
[2024-05-13 23:42:21] -rw------- 1 boinc boinc        424 May 13 06:59 setup.sh.local
[2024-05-13 23:42:21] -rw------- 1 boinc boinc    1002387 May 13 06:59 agis_schedconf.cvmfs.json
[2024-05-13 23:42:21] -rw------- 1 boinc boinc    1319809 May 13 06:59 cric_ddmendpoints.json
[2024-05-13 23:42:21] drwx------ 4 boinc boinc       4096 May 13 06:59 pilot3
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc        533 May 13 23:34 boinc_task_state.xml
[2024-05-13 23:42:21] -rw------- 1 boinc boinc         95 May 13 23:41 pilot_heartbeat.json
[2024-05-13 23:42:21] -rw------- 1 boinc boinc 1263056337 May 13 23:41 HITS.38734053._000735.pool.root.1
[2024-05-13 23:42:21] -rw------- 1 boinc boinc       1054 May 13 23:41 memory_monitor_summary.json
[2024-05-13 23:42:21] -rw------- 1 boinc boinc          0 May 13 23:41 agis_ddmendpoints.agis.ALL.json
[2024-05-13 23:42:21] -rw------- 1 boinc boinc    1910839 May 13 23:41 log.38734053._000735.job.log.tgz.1
[2024-05-13 23:42:21] -rw------- 1 boinc boinc      28041 May 13 23:42 heartbeat.json
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc       8192 May 13 23:42 boinc_mmap_file
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc         29 May 13 23:42 wrapper_checkpoint.txt
[2024-05-13 23:42:21] -rw------- 1 boinc boinc       4227 May 13 23:42 pilotlog.txt
[2024-05-13 23:42:21] -rw------- 1 boinc boinc    9443420 May 13 23:42 log.38734053._000735.job.log.1
[2024-05-13 23:42:21] -rw------- 1 boinc boinc        353 May 13 23:42 output.list
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc        620 May 13 23:42 runtime_log
[2024-05-13 23:42:21] -rw------- 1 boinc boinc   11397120 May 13 23:42 result.tar.gz
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc      11430 May 13 23:42 runtime_log.err
[2024-05-13 23:42:21] -rw------- 1 boinc boinc        667 May 13 23:42 Y39NDmZMnO5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmsOFKDmmdpklm.diag
[2024-05-13 23:42:21] -rw-r--r-- 1 boinc boinc      21643 May 13 23:42 stderr.txt
[2024-05-13 23:42:21] HITS file was successfully produced:
[2024-05-13 23:42:21] -rw------- 1 boinc boinc 1263056337 May 13 23:41 shared/HITS.pool.root.1
[2024-05-13 23:42:21]  *** Contents of shared directory: ***
[2024-05-13 23:42:21] total 1565284
[2024-05-13 23:42:21] -rw-r--r-- 2 boinc boinc  327883988 May 13 06:59 ATLAS.root_0
[2024-05-13 23:42:21] -rw-r--r-- 2 boinc boinc      17539 May 13 06:59 start_atlas.sh
[2024-05-13 23:42:21] -rw-r--r-- 2 boinc boinc     481737 May 13 06:59 input.tar.gz
[2024-05-13 23:42:21] -rw------- 1 boinc boinc 1263056337 May 13 23:41 HITS.pool.root.1
[2024-05-13 23:42:21] -rw------- 1 boinc boinc   11397120 May 13 23:42 result.tar.gz
23:42:23 (1364284): run_atlas exited; CPU time 230080.508478
23:42:23 (1364284): called boinc_finish(0)

</stderr_txt>
]]>

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