Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:31:26 (25469): wrapper (7.7.26015): starting
16:31:26 (25469): wrapper: running run_atlas (--nthreads 8)
[2024-05-02 16:31:26] Arguments: --nthreads 8
[2024-05-02 16:31:26] Threads: 8
[2024-05-02 16:31:26] Checking for CVMFS
[2024-05-02 16:31:27] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-02 16:31:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-02 16:31:27] Running cvmfs_config stat atlas.cern.ch
[2024-05-02 16:31:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-02 16:31:27] 2.11.2.0 23367 763 60684 132305 1 1 9806326 18432001 1 130560 0 951709 99.991 122523 51982 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-02 16:31:27] CVMFS is ok
[2024-05-02 16:31:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-02 16:31:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-02 16:31:27] Further information can be found at the LHC@home message board.
[2024-05-02 16:31:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-02 16:31:27] Checking for apptainer binary...
[2024-05-02 16:31:27] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-02 16:31:27] Running /usr/bin/apptainer --version
[2024-05-02 16:31:27] apptainer version 1.3.0-1.el7
[2024-05-02 16:31:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-02 16:31:28] c-16-12.aglt2.org
[2024-05-02 16:31:28] apptainer works
[2024-05-02 16:31:28] Set ATHENA_PROC_NUMBER=8
[2024-05-02 16:31:28] Set ATHENA_CORE_NUMBER=8
[2024-05-02 16:31:28] Starting ATLAS job with PandaID=6185259952
[2024-05-02 16:31:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-02 18:29:41]  *** The last 200 lines of the pilot log: ***
[2024-05-02 18:29:41]  ddmendpoint=NDGF-T1_DATADISK
[2024-05-02 18:29:41]  direct_access_lan=False
[2024-05-02 18:29:41]  direct_access_wan=False
[2024-05-02 18:29:41]  domain=
[2024-05-02 18:29:41]  filesize=336386
[2024-05-02 18:29:41]  filetype=log
[2024-05-02 18:29:41]  guid=d979cd37-ac27-441a-ae94-f6737ae9181e
[2024-05-02 18:29:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-02 18:29:41]  is_tar=False
[2024-05-02 18:29:41]  lfn=log.38204279._025192.job.log.tgz.1
[2024-05-02 18:29:41]  mtime=0
[2024-05-02 18:29:41]  protocol_id=None
[2024-05-02 18:29:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-02 18:29:41]  replicas=None
[2024-05-02 18:29:41]  scope=mc23_13p6TeV
[2024-05-02 18:29:41]  status=None
[2024-05-02 18:29:41]  status_code=0
[2024-05-02 18:29:41]  storage_token=
[2024-05-02 18:29:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6185259952/log.38204279._025192.job.log.tgz.1
[2024-05-02 18:29:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/69/log.38204279._025192.job.log.tgz.1
[2024-05-02 18:29:41]  workdir=None
[2024-05-02 18:29:41] ]
[2024-05-02 18:29:41] 2024-05-02 22:29:16,969 | INFO     | transferring file log.38204279._025192.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6185259952/log.38204279._025192.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-05-02 18:29:41] 2024-05-02 22:29:16,969 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6185259952/log.38204279._025192.job.log.tgz.1 /tmp/boinchome/slots/0/log.38204279._025192.job
[2024-05-02 18:29:41] 2024-05-02 22:29:16,995 | INFO     | adding to output.list: log.38204279._025192.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/69/log.38204279._025192.job.log.tg
[2024-05-02 18:29:41] 2024-05-02 22:29:16,996 | INFO     | summary of transferred files:
[2024-05-02 18:29:41] 2024-05-02 22:29:16,996 | INFO     |  -- lfn=log.38204279._025192.job.log.tgz.1, status_code=0, status=transferred
[2024-05-02 18:29:41] 2024-05-02 22:29:16,996 | INFO     | stage-out finished correctly
[2024-05-02 18:29:41] 2024-05-02 22:29:18,683 | WARNING  | process 37193 is no longer using CPU - aborting
[2024-05-02 18:29:41] 2024-05-02 22:29:18,684 | INFO     | will not send any job update
[2024-05-02 18:29:41] 2024-05-02 22:29:20,193 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-02 18:29:41] 2024-05-02 22:29:21,187 | INFO     | monitor loop #560: job 0:6185259952 is in state 'finished'
[2024-05-02 18:29:41] 2024-05-02 22:29:21,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-02 18:29:41] 2024-05-02 22:29:21,234 | INFO     | job 6185259952 has state=finished
[2024-05-02 18:29:41] 2024-05-02 22:29:21,235 | INFO     | preparing for final server update for job 6185259952 in state='finished'
[2024-05-02 18:29:41] 2024-05-02 22:29:21,235 | INFO     | this job has now completed (state=finished)
[2024-05-02 18:29:41] 2024-05-02 22:29:21,236 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-02 18:29:41] 2024-05-02 22:29:21,236 | INFO     | job 6185259952 has finished - writing final server update
[2024-05-02 18:29:41] 2024-05-02 22:29:21,236 | INFO     | total number of processed events: 400 (read)
[2024-05-02 18:29:41] 2024-05-02 22:29:21,241 | INFO     | executing command: lscpu
[2024-05-02 18:29:41] 2024-05-02 22:29:21,293 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-05-02 18:29:41] 2024-05-02 22:29:21,293 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-02 18:29:41] 2024-05-02 22:29:21,334 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-02 18:29:41] 2024-05-02 22:29:23,690 | INFO     | monitor loop #561: job 0:6185259952 is in state 'finished'
[2024-05-02 18:29:41] 2024-05-02 22:29:23,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-02 18:29:41] 2024-05-02 22:29:24,793 | INFO     | CPU arch script returned: x86-64-v2
[2024-05-02 18:29:41] 2024-05-02 22:29:24,793 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6185259952/memory_monitor_summary.json (trf name=prmon)
[2024-05-02 18:29:41] 2024-05-02 22:29:24,795 | INFO     | extracted standard info from prmon json
[2024-05-02 18:29:41] 2024-05-02 22:29:24,795 | INFO     | extracted standard memory fields from prmon json
[2024-05-02 18:29:41] 2024-05-02 22:29:24,796 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-02 18:29:41] 2024-05-02 22:29:24,796 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-02 18:29:41] 2024-05-02 22:29:24,800 | INFO     | fitting pss+swap vs Time
[2024-05-02 18:29:41] 2024-05-02 22:29:24,802 | INFO     | current chi2=4.862080530242938 (change=13.566603846408706 %)
[2024-05-02 18:29:41] 2024-05-02 22:29:24,802 | INFO     | right removable region: 110
[2024-05-02 18:29:41] 2024-05-02 22:29:24,803 | INFO     | current chi2=2.9592989211448018 (change=47.392427090173356 %)
[2024-05-02 18:29:41] 2024-05-02 22:29:24,804 | INFO     | current chi2=1.5201644437926856 (change=48.63092630045593 %)
[2024-05-02 18:29:41] 2024-05-02 22:29:24,805 | INFO     | current chi2=0.8959738584664956 (change=41.060727862367685 %)
[2024-05-02 18:29:41] 2024-05-02 22:29:24,805 | INFO     | current chi2=0.8963943897157678 (change=-0.0469356605997385 %)
[2024-05-02 18:29:41] 2024-05-02 22:29:24,806 | INFO     | left removable region: 40
[2024-05-02 18:29:41] 2024-05-02 22:29:24,806 | INFO     | current memory leak: -36.98 B/s (using 70 data points, chi2=0.06)
[2024-05-02 18:29:41] 2024-05-02 22:29:24,807 | INFO     | ..............................
[2024-05-02 18:29:41] 2024-05-02 22:29:24,807 | INFO     | . Timing measurements:
[2024-05-02 18:29:41] 2024-05-02 22:29:24,807 | INFO     | . get job = 0 s
[2024-05-02 18:29:41] 2024-05-02 22:29:24,807 | INFO     | . initial setup = 1 s
[2024-05-02 18:29:41] 2024-05-02 22:29:24,807 | INFO     | . payload setup = 4 s
[2024-05-02 18:29:41] 2024-05-02 22:29:24,807 | INFO     | . stage-in = 0 s
[2024-05-02 18:29:41] 2024-05-02 22:29:24,808 | INFO     | . payload execution = 7035 s
[2024-05-02 18:29:41] 2024-05-02 22:29:24,808 | INFO     | . stage-out = 0 s
[2024-05-02 18:29:41] 2024-05-02 22:29:24,808 | INFO     | . log creation = 0 s
[2024-05-02 18:29:41] 2024-05-02 22:29:24,808 | INFO     | ..............................
[2024-05-02 18:29:41] 2024-05-02 22:29:24,899 | INFO     | 
[2024-05-02 18:29:41] 2024-05-02 22:29:24,899 | INFO     | job summary report
[2024-05-02 18:29:41] 2024-05-02 22:29:24,900 | INFO     | --------------------------------------------------
[2024-05-02 18:29:41] 2024-05-02 22:29:24,900 | INFO     | PanDA job id: 6185259952
[2024-05-02 18:29:41] 2024-05-02 22:29:24,900 | INFO     | task id: 38204279
[2024-05-02 18:29:41] 2024-05-02 22:29:24,900 | INFO     | errors: (none)
[2024-05-02 18:29:41] 2024-05-02 22:29:24,901 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-02 18:29:41] 2024-05-02 22:29:24,901 | INFO     | pilot state: finished 
[2024-05-02 18:29:41] 2024-05-02 22:29:24,901 | INFO     | transexitcode: 0
[2024-05-02 18:29:41] 2024-05-02 22:29:24,901 | INFO     | exeerrorcode: 0
[2024-05-02 18:29:41] 2024-05-02 22:29:24,901 | INFO     | exeerrordiag: 
[2024-05-02 18:29:41] 2024-05-02 22:29:24,902 | INFO     | exitcode: 0
[2024-05-02 18:29:41] 2024-05-02 22:29:24,902 | INFO     | exitmsg: OK
[2024-05-02 18:29:41] 2024-05-02 22:29:24,902 | INFO     | cpuconsumptiontime: 48389 s
[2024-05-02 18:29:41] 2024-05-02 22:29:24,902 | INFO     | nevents: 400
[2024-05-02 18:29:41] 2024-05-02 22:29:24,903 | INFO     | neventsw: 0
[2024-05-02 18:29:41] 2024-05-02 22:29:24,903 | INFO     | pid: 37193
[2024-05-02 18:29:41] 2024-05-02 22:29:24,903 | INFO     | pgrp: 37193
[2024-05-02 18:29:41] 2024-05-02 22:29:24,903 | INFO     | corecount: 8
[2024-05-02 18:29:41] 2024-05-02 22:29:24,903 | INFO     | event service: False
[2024-05-02 18:29:41] 2024-05-02 22:29:24,904 | INFO     | sizes: {0: 2380649, 1: 2380848, 4: 2381054, 11: 2381082, 7044: 2408344, 7045: 2417487, 7049: 2417487, 7053: 2417657}
[2024-05-02 18:29:41] 2024-05-02 22:29:24,904 | INFO     | --------------------------------------------------
[2024-05-02 18:29:41] 2024-05-02 22:29:24,904 | INFO     | 
[2024-05-02 18:29:41] 2024-05-02 22:29:24,904 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2024-05-02 18:29:41] 2024-05-02 22:29:24,938 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,938 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,939 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,939 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,939 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,939 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,940 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,941 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-02 18:29:41] 2024-05-02 22:29:24,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,941 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-02 18:29:41] 2024-05-02 22:29:24,942 | INFO     | job 6185259952 has completed (purged errors)
[2024-05-02 18:29:41] 2024-05-02 22:29:24,942 | INFO     | overall cleanup function is called
[2024-05-02 18:29:41] 2024-05-02 22:29:25,950 | INFO     | --- collectZombieJob: --- 10, [37193]
[2024-05-02 18:29:41] 2024-05-02 22:29:25,950 | INFO     | zombie collector waiting for pid 37193
[2024-05-02 18:29:41] 2024-05-02 22:29:25,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-02 18:29:41] 2024-05-02 22:29:26,956 | INFO     | collected zombie processes
[2024-05-02 18:29:41] 2024-05-02 22:29:26,956 | INFO     | will now attempt to kill all subprocesses of pid=37193
[2024-05-02 18:29:41] 2024-05-02 22:29:27,056 | INFO     | process IDs to be killed: [37193] (in reverse order)
[2024-05-02 18:29:41] 2024-05-02 22:29:27,122 | WARNING  | found no corresponding commands to process id(s)
[2024-05-02 18:29:41] 2024-05-02 22:29:27,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-02 18:29:41] 2024-05-02 22:29:27,129 | INFO     | did not find any defunct processes belonging to 37193
[2024-05-02 18:29:41] 2024-05-02 22:29:27,134 | INFO     | did not find any defunct processes belonging to 37193
[2024-05-02 18:29:41] 2024-05-02 22:29:27,134 | INFO     | ready for new job
[2024-05-02 18:29:41] 2024-05-02 22:29:27,134 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-02 18:29:41] 2024-05-02 22:29:27,136 | INFO     | *************************************
[2024-05-02 18:29:41] 2024-05-02 22:29:27,136 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-05-02 18:29:41] 2024-05-02 22:29:27,136 | INFO     | *************************************
[2024-05-02 18:29:41] 2024-05-02 22:29:27,136 | INFO     | 
[2024-05-02 18:29:41] 2024-05-02 22:29:27,138 | INFO     | architecture information:
[2024-05-02 18:29:41] 2024-05-02 22:29:27,139 | INFO     | executing command: cat /etc/os-release
[2024-05-02 18:29:41] 2024-05-02 22:29:27,157 | INFO     | cat /etc/os-release:
[2024-05-02 18:29:41] NAME="CentOS Linux"
[2024-05-02 18:29:41] VERSION="7 (Core)"
[2024-05-02 18:29:41] ID="centos"
[2024-05-02 18:29:41] ID_LIKE="rhel fedora"
[2024-05-02 18:29:41] VERSION_ID="7"
[2024-05-02 18:29:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-02 18:29:41] ANSI_COLOR="0;31"
[2024-05-02 18:29:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-02 18:29:41] HOME_URL="https://www.centos.org/"
[2024-05-02 18:29:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-02 18:29:41] 
[2024-05-02 18:29:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-02 18:29:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-02 18:29:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-02 18:29:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-02 18:29:41] 
[2024-05-02 18:29:41] 2024-05-02 22:29:27,157 | INFO     | *************************************
[2024-05-02 18:29:41] 2024-05-02 22:29:27,660 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2024-05-02 18:29:41] 2024-05-02 22:29:27,684 | INFO     | sufficient remaining disk space (106380132352 B)
[2024-05-02 18:29:41] 2024-05-02 22:29:27,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-02 18:29:41] 2024-05-02 22:29:27,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-02 18:29:41] 2024-05-02 22:29:27,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-02 18:29:41] 2024-05-02 22:29:27,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-02 18:29:41] 2024-05-02 22:29:27,686 | INFO     | aborting loop
[2024-05-02 18:29:41] 2024-05-02 22:29:27,806 | INFO     | found 0 job(s) in 20 queues
[2024-05-02 18:29:41] 2024-05-02 22:29:27,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-02 18:29:41] 2024-05-02 22:29:27,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-02 18:29:41] 2024-05-02 22:29:27,976 | INFO     | all data control threads have been joined
[2024-05-02 18:29:41] 2024-05-02 22:29:28,077 | INFO     | all job control threads have been joined
[2024-05-02 18:29:41] 2024-05-02 22:29:28,690 | INFO     | [job] retrieve thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:28,692 | INFO     | [job] job monitor thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:28,982 | INFO     | [data] control thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:29,051 | INFO     | all payload control threads have been joined
[2024-05-02 18:29:41] 2024-05-02 22:29:29,062 | INFO     | [payload] execute_payloads thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:29,082 | INFO     | [job] control thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:29,106 | INFO     | [payload] failed_post thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:29,398 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:29,641 | INFO     | [job] create_data_payload thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:29,681 | INFO     | [job] validate thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:29,692 | INFO     | [data] copytool_out thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:29,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-02 18:29:41] 2024-05-02 22:29:29,956 | INFO     | [payload] validate_post thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:29,986 | INFO     | [payload] validate_pre thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:29,993 | INFO     | [data] copytool_in thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:30,057 | INFO     | [payload] control thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:30,767 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-02 18:29:41] 2024-05-02 22:29:30,916 | INFO     | [job] queue monitor thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:34,773 | INFO     | [data] queue_monitor thread has finished
[2024-05-02 18:29:41] 2024-05-02 22:29:35,997 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393312315200)>', '<ExcThread(monitor, started 140392590722816)>']
[2024-05-02 18:29:41] 2024-05-02 22:29:36,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-02 18:29:41] 2024-05-02 22:29:36,853 | INFO     | [monitor] control thread has ended
[2024-05-02 18:29:41] 2024-05-02 22:29:41,022 | INFO     | all workflow threads have been joined
[2024-05-02 18:29:41] 2024-05-02 22:29:41,022 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-02 18:29:41] 2024-05-02 22:29:41,023 | INFO     | traces error code: 0
[2024-05-02 18:29:41] 2024-05-02 22:29:41,023 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-02 18:29:41] 2024-05-02 22:29:41,110 [wrapper] ==== pilot stdout END ====
[2024-05-02 18:29:41] 2024-05-02 22:29:41,114 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-02 18:29:41] 2024-05-02 22:29:41,119 [wrapper] pilotpid: 29707
[2024-05-02 18:29:41] 2024-05-02 22:29:41,123 [wrapper] Pilot exit status: 0
[2024-05-02 18:29:41] 2024-05-02 22:29:41,136 [wrapper] pandaids: 6185259952
[2024-05-02 18:29:41] 2024-05-02 22:29:41,188 [wrapper] cleanup: SIGTERM to supervisor_pilot 37999 29708
[2024-05-02 18:29:41] 2024-05-02 22:29:41,193 [wrapper] Test setup, not cleaning
[2024-05-02 18:29:41] 2024-05-02 22:29:41,197 [wrapper] ==== wrapper stdout END ====
[2024-05-02 18:29:41] 2024-05-02 22:29:41,201 [wrapper] ==== wrapper stderr END ====
[2024-05-02 18:29:41] 2024-05-02 22:29:41,208 [wrapper] apfmon messages muted
[2024-05-02 18:29:41]  *** Error codes and diagnostics ***
[2024-05-02 18:29:41]     "exeErrorCode": 0,
[2024-05-02 18:29:41]     "exeErrorDiag": "",
[2024-05-02 18:29:41]     "pilotErrorCode": 0,
[2024-05-02 18:29:41]     "pilotErrorDiag": "",
[2024-05-02 18:29:41]  *** Listing of results directory ***
[2024-05-02 18:29:41] total 621960
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas    462745 Apr 24 12:46 pilot3.tar.gz
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas      6720 Apr 24 13:13 queuedata.json
[2024-05-02 18:29:41] -rwx------ 1 boincer umatlas     32211 Apr 24 13:13 runpilot2-wrapper.sh
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas       100 May  2 16:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-02 18:29:41] -rwxr-xr-x 1 boincer umatlas      7986 May  2 16:31 run_atlas
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas       105 May  2 16:31 job.xml
[2024-05-02 18:29:41] -rw-r--r-- 2 boincer umatlas 451263173 May  2 16:31 EVNT.38204277._000864.pool.root.1
[2024-05-02 18:29:41] -rw-r--r-- 2 boincer umatlas     17537 May  2 16:31 start_atlas.sh
[2024-05-02 18:29:41] drwxrwx--x 2 boincer umatlas      4096 May  2 16:31 shared
[2024-05-02 18:29:41] -rw-r--r-- 2 boincer umatlas    474800 May  2 16:31 input.tar.gz
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas         0 May  2 16:31 boinc_lockfile
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas      2583 May  2 16:31 pandaJob.out
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas       424 May  2 16:31 setup.sh.local
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas   1002467 May  2 16:31 agis_schedconf.cvmfs.json
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas         0 May  2 16:31 agis_ddmendpoints.agis.ALL.json
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas   1317658 May  2 16:31 cric_ddmendpoints.json
[2024-05-02 18:29:41] drwx------ 4 boincer umatlas      4096 May  2 16:31 pilot3
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas      5952 May  2 18:21 init_data.xml
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas 180101467 May  2 18:28 HITS.38204279._025192.pool.root.1
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas       530 May  2 18:28 boinc_task_state.xml
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas        95 May  2 18:28 pilot_heartbeat.json
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas      1044 May  2 18:29 memory_monitor_summary.json
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas    336386 May  2 18:29 log.38204279._025192.job.log.tgz.1
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas      7722 May  2 18:29 heartbeat.json
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas      8192 May  2 18:29 boinc_mmap_file
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas        27 May  2 18:29 wrapper_checkpoint.txt
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas      4212 May  2 18:29 pilotlog.txt
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas    680126 May  2 18:29 log.38204279._025192.job.log.1
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas       357 May  2 18:29 output.list
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas       620 May  2 18:29 runtime_log
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas   1034240 May  2 18:29 result.tar.gz
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas     10994 May  2 18:29 runtime_log.err
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas       646 May  2 18:29 ktGMDmSMvJ5nsSi4apGgGQJmABFKDmABFKDmRLXKDmELRKDm57W2To.diag
[2024-05-02 18:29:41] -rw-r--r-- 1 boincer umatlas     21053 May  2 18:29 stderr.txt
[2024-05-02 18:29:41] HITS file was successfully produced:
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas 180101467 May  2 18:28 shared/HITS.pool.root.1
[2024-05-02 18:29:41]  *** Contents of shared directory: ***
[2024-05-02 18:29:41] total 618068
[2024-05-02 18:29:41] -rw-r--r-- 2 boincer umatlas 451263173 May  2 16:31 ATLAS.root_0
[2024-05-02 18:29:41] -rw-r--r-- 2 boincer umatlas     17537 May  2 16:31 start_atlas.sh
[2024-05-02 18:29:41] -rw-r--r-- 2 boincer umatlas    474800 May  2 16:31 input.tar.gz
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas 180101467 May  2 18:28 HITS.pool.root.1
[2024-05-02 18:29:41] -rw------- 1 boincer umatlas   1034240 May  2 18:29 result.tar.gz
18:29:43 (25469): run_atlas exited; CPU time 48144.840010
18:29:43 (25469): called boinc_finish(0)

</stderr_txt>
]]>

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