| Name | lsHKDmiPDK5np2BDcpmwOghnABFKDmABFKDmJjxZDmj4HKDmmJBLjm_2 |
| Workunit | 222432068 |
| Created | 26 Apr 2024, 2:40:29 UTC |
| Sent | 26 Apr 2024, 5:52:46 UTC |
| Report deadline | 4 May 2024, 5:52:46 UTC |
| Received | 30 Apr 2024, 15:00:26 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 10844344 |
| Run time | 1 hours 21 min 56 sec |
| CPU time | 11 hours 28 min 3 sec |
| Validate state | Valid |
| Credit | 1,149.43 |
| Device peak FLOPS | 87.69 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.87 GB |
| Peak swap size | 3.33 GB |
| Peak disk usage | 1.54 GB |
Stderr output
<core_client_version>7.18.1</core_client_version> <![CDATA[ <stderr_txt> 14:06:17 (521519): wrapper (7.7.26015): starting 14:06:17 (521519): wrapper: running run_atlas (--nthreads 12) [2024-04-28 14:06:17] Arguments: --nthreads 12 [2024-04-28 14:06:17] Threads: 12 [2024-04-28 14:06:17] Checking for CVMFS [2024-04-28 14:06:17] Probing /cvmfs/atlas.cern.ch... OK [2024-04-28 14:06:17] Probing /cvmfs/atlas-condb.cern.ch... OK [2024-04-28 14:06:17] Running cvmfs_config stat atlas.cern.ch [2024-04-28 14:06:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2024-04-28 14:06:18] 2.11.2.0 319858 107 47728 132134 0 56 2142013 4096000 0 130560 0 157520 99.999 2100 352 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1 [2024-04-28 14:06:18] CVMFS is ok [2024-04-28 14:06:18] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-04-28 14:06:18] Small home clusters do not require a local http proxy but it is suggested if [2024-04-28 14:06:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2024-04-28 14:06:18] Further information can be found at the LHC@home message board. [2024-04-28 14:06:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-04-28 14:06:18] Checking for apptainer binary... [2024-04-28 14:06:18] Using apptainer found in PATH at /usr/bin/apptainer [2024-04-28 14:06:18] Running /usr/bin/apptainer --version [2024-04-28 14:06:18] apptainer version 1.3.0 [2024-04-28 14:06:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-04-28 14:06:18] BoincMint [2024-04-28 14:06:18] apptainer works [2024-04-28 14:06:18] Set ATHENA_PROC_NUMBER=12 [2024-04-28 14:06:18] Set ATHENA_CORE_NUMBER=12 [2024-04-28 14:06:18] Starting ATLAS job with PandaID=6186367029 [2024-04-28 14:06:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/37 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh 15:16:23 (3117): wrapper (7.7.26015): starting 15:16:23 (3117): wrapper: running run_atlas (--nthreads 12) [2024-04-28 15:16:23] Arguments: --nthreads 12 [2024-04-28 15:16:23] Threads: 12 [2024-04-28 15:16:23] This job has been restarted, cleaning up previous attempt [2024-04-28 15:16:23] Checking for CVMFS [2024-04-28 15:16:26] Probing /cvmfs/atlas.cern.ch... OK [2024-04-28 15:16:27] Probing /cvmfs/atlas-condb.cern.ch... OK [2024-04-28 15:16:27] Running cvmfs_config stat atlas.cern.ch [2024-04-28 15:16:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2024-04-28 15:16:27] 2.11.2.0 3560 0 25140 132135 3 1 2146376 4096000 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1 [2024-04-28 15:16:27] CVMFS is ok [2024-04-28 15:16:27] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-04-28 15:16:27] Small home clusters do not require a local http proxy but it is suggested if [2024-04-28 15:16:27] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2024-04-28 15:16:27] Further information can be found at the LHC@home message board. [2024-04-28 15:16:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-04-28 15:16:27] Checking for apptainer binary... [2024-04-28 15:16:27] Using apptainer found in PATH at /usr/bin/apptainer [2024-04-28 15:16:27] Running /usr/bin/apptainer --version [2024-04-28 15:16:27] apptainer version 1.3.0 [2024-04-28 15:16:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-04-28 15:16:27] BoincMint [2024-04-28 15:16:27] apptainer works [2024-04-28 15:16:27] Set ATHENA_PROC_NUMBER=12 [2024-04-28 15:16:27] Set ATHENA_CORE_NUMBER=12 [2024-04-28 15:16:27] Starting ATLAS job with PandaID=6186367029 [2024-04-28 15:16:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/37 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh 16:00:58 (3032): wrapper (7.7.26015): starting 16:00:58 (3032): wrapper: running run_atlas (--nthreads 12) [2024-04-28 16:00:58] Arguments: --nthreads 12 [2024-04-28 16:00:58] Threads: 12 [2024-04-28 16:00:58] This job has been restarted, cleaning up previous attempt [2024-04-28 16:00:58] Checking for CVMFS [2024-04-28 16:00:59] Probing /cvmfs/atlas.cern.ch... OK [2024-04-28 16:00:59] Probing /cvmfs/atlas-condb.cern.ch... OK [2024-04-28 16:00:59] Running cvmfs_config stat atlas.cern.ch [2024-04-28 16:00:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2024-04-28 16:00:59] 2.11.2.0 3344 0 24936 132135 3 1 2146376 4096000 0 130560 1 0 100.000 0 0 http://s1sampa-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0 [2024-04-28 16:00:59] CVMFS is ok [2024-04-28 16:00:59] Efficiency of ATLAS tasks can be improved by the following measure(s): [2024-04-28 16:00:59] Small home clusters do not require a local http proxy but it is suggested if [2024-04-28 16:00:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2024-04-28 16:00:59] Further information can be found at the LHC@home message board. [2024-04-28 16:00:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-04-28 16:00:59] Checking for apptainer binary... [2024-04-28 16:00:59] Using apptainer found in PATH at /usr/bin/apptainer [2024-04-28 16:00:59] Running /usr/bin/apptainer --version [2024-04-28 16:00:59] apptainer version 1.3.0 [2024-04-28 16:00:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2024-04-28 16:01:00] source: open /.singularity.d/env/94-appsbase.sh: input/output error BoincMint [2024-04-28 16:01:00] apptainer works [2024-04-28 16:01:00] Set ATHENA_PROC_NUMBER=12 [2024-04-28 16:01:00] Set ATHENA_CORE_NUMBER=12 [2024-04-28 16:01:00] Starting ATLAS job with PandaID=6186367029 [2024-04-28 16:01:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/37 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2024-04-28 16:01:06] *** The last 200 lines of the pilot log: *** [2024-04-28 16:01:06] [2024-04-28 16:01:06] --- Bespoke environment from CRIC --- [2024-04-28 16:01:06] 2024-04-28 15:01:00,669 [wrapper] CRIC environ field: <empty> [2024-04-28 16:01:06] [2024-04-28 16:01:06] ---- Setup ALRB ---- [2024-04-28 16:01:06] 2024-04-28 15:01:00,671 [wrapper] Skipping Setup ALRB due to --container flag [2024-04-28 16:01:06] [2024-04-28 16:01:06] ---- Check python version ---- [2024-04-28 16:01:06] 2024-04-28 15:01:00,673 [wrapper] python3 selected from cmdline [2024-04-28 16:01:06] 2024-04-28 15:01:00,674 [wrapper] Using ALRB to setup python3 [2024-04-28 16:01:06] 2024-04-28 15:01:04,117 [wrapper] Python version is > 3.6 (309) [2024-04-28 16:01:06] 2024-04-28 15:01:04,119 [wrapper] Using /cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.18-x86_64-centos7/bin/python3 for python compatibility [2024-04-28 16:01:06] [2024-04-28 16:01:06] ---- Setup local ATLAS ---- [2024-04-28 16:01:06] 2024-04-28 15:01:04,121 [wrapper] Skipping Setup local ATLAS due to --container flag [2024-04-28 16:01:06] [2024-04-28 16:01:06] ---- Setup ALRB curl ---- [2024-04-28 16:01:06] 2024-04-28 15:01:04,122 [wrapper] Running lsetup curl [2024-04-28 16:01:06] Skipping setting up curl [2024-04-28 16:01:06] [2024-04-28 16:01:06] ---- Setup logstash ---- [2024-04-28 16:01:06] 2024-04-28 15:01:04,654 [wrapper] Running lsetup logstash [2024-04-28 16:01:06] [2024-04-28 16:01:06] ---- Setup psutil ---- [2024-04-28 16:01:06] 2024-04-28 15:01:05,243 [wrapper] Running lsetup psutil [2024-04-28 16:01:06] [2024-04-28 16:01:06] ---- Setup stomp ---- [2024-04-28 16:01:06] 2024-04-28 15:01:05,881 [wrapper] Stomp not requested in CRIC catchall [2024-04-28 16:01:06] [2024-04-28 16:01:06] ---- Proxy Information ---- [2024-04-28 16:01:06] 2024-04-28 15:01:05,883 [wrapper] Skipping proxy checks due to -t flag [2024-04-28 16:01:06] ---- Job Environment ---- [2024-04-28 16:01:06] ATLAS_LOCAL_ACM_VERSION=0.1.29 [2024-04-28 16:01:06] MANPATH=/usr/local/share/man:/usr/share/man [2024-04-28 16:01:06] AtlasSetupSite=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/AtlasSetup/.config/.asetup.site [2024-04-28 16:01:06] ALRB_cvmfs_sftnight_repo=/cvmfs/sft-nightlies.cern.ch/lcg [2024-04-28 16:01:06] ALRB_LOCAL_PY3=YES [2024-04-28 16:01:06] HEP_OSLIBS_VER=7.3.5-2.el7.cern [2024-04-28 16:01:06] ALRB_cvmfs_CDB=/cvmfs/atlas-condb.cern.ch/repo/conditions [2024-04-28 16:01:06] GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest [2024-04-28 16:01:06] ATLAS_LOCAL_ROOT_PACOPT= [2024-04-28 16:01:06] APPTAINER_COMMAND=exec [2024-04-28 16:01:06] ALRB_testPath=,, [2024-04-28 16:01:06] ALRB_SHELL=bash [2024-04-28 16:01:06] TMPDIR=/var/lib/boinc-client/slots/37/.apptainertmp [2024-04-28 16:01:06] LIBRARY_PATH=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.18-x86_64-centos7/lib [2024-04-28 16:01:06] GRID_GLOBAL_JOBURL=https://arc-boinc-06.cern.ch:443/arex/lsHKDmiPDK5np2BDcpmwOghnABFKDmABFKDmJjxZDmj4HKDmmJBLjm [2024-04-28 16:01:06] RUCIO_PYTHONBIN=python3 [2024-04-28 16:01:06] ALRB_clientShell=bash [2024-04-28 16:01:06] ATLAS_LOCAL_SETUP_OPTIONS=--quiet [2024-04-28 16:01:06] OLDPWD=/var/lib/boinc-client/slots/37 [2024-04-28 16:01:06] ALRB_useGridSW=emi [2024-04-28 16:01:06] AMI_envPython=python3 [2024-04-28 16:01:06] VIEWSDIR=/cvmfs/sft.cern.ch/lcg/views [2024-04-28 16:01:06] ALRB_SFT_LCG=/cvmfs/sft.cern.ch/lcg [2024-04-28 16:01:06] UMD_REL_VER=4.1.3-1.el7.centos [2024-04-28 16:01:06] ALRB_envPython=python3 [2024-04-28 16:01:06] USER=boinc [2024-04-28 16:01:06] USER_PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/bin:/usr/bin:/sbin:/usr/sbin:/usr/local/bin:/usr/local/sbin [2024-04-28 16:01:06] INVOCATION_ID=fbaccf2186674f38a63c846b598b3287 [2024-04-28 16:01:06] LD_LIBRARY_PATH=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.18-x86_64-centos7/lib:/.singularity.d/libs [2024-04-28 16:01:06] EMI_PYTHONBIN=python3 [2024-04-28 16:01:06] ALRB_RHVER=7 [2024-04-28 16:01:06] ALRB_noGridMW=NO [2024-04-28 16:01:06] BOINC_APP=ATLAS [2024-04-28 16:01:06] ALRB_SCRATCH=/var/lib/boinc-client/slots/37/.alrb [2024-04-28 16:01:06] ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase [2024-04-28 16:01:06] ALRB_printHelpMain= [2024-04-28 16:01:06] SINGULARITY_NAME=x86_64-centos7 [2024-04-28 16:01:06] CMTUSERCONTEXT=/cvmfs/atlas.cern.ch/repo/tools/slc6/cmt [2024-04-28 16:01:06] ALRB_cvmfs_Athena=/cvmfs/atlas.cern.ch/repo/sw/software [2024-04-28 16:01:06] ATLAS_LOCAL_AREA=/var/lib/boinc-client/slots/37/ [2024-04-28 16:01:06] ALRB_pythonBinDir=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.18-x86_64-centos7/bin [2024-04-28 16:01:06] AtlasSetup=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/AtlasSetup/V03-00-06/AtlasSetup [2024-04-28 16:01:06] ATLAS_LOCAL_RCSETUP_VERSION=00-04-18 [2024-04-28 16:01:06] RUNTIME_CONFIG_DIR=/var/lib/boinc-client/slots/37/ [2024-04-28 16:01:06] ATLAS_LOCAL_ASETUP_PATH=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/AtlasSetup/V03-00-06 [2024-04-28 16:01:06] PANDA_PYTHON_EXEC=python3 [2024-04-28 16:01:06] ALRB_availableTools= acm adctools agis art asetup astyle atlantis boost clang cmake cppcheck cpuflags crane curl darshan davix dcube eiclient emi fax fftw gcc gccxml git gitlab gsl hdf5 lcgenv logstas [2024-04-28 16:01:06] ALRB_RELOCATECVMFS=NO [2024-04-28 16:01:06] APPTAINER_APPNAME= [2024-04-28 16:01:06] PATH=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/5.9.5-x86_64-centos7/bin:/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/logstash/2.3.0/bin:/cvmfs/atlas.cern.ch/repo/ATLASLocalRoot [2024-04-28 16:01:06] PANDA_JSID=harvester-CERN_central_ACTA [2024-04-28 16:01:06] AtlasSetupSiteCMake=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/AtlasSetup/.configCMake/.asetup.site [2024-04-28 16:01:06] ALRB_infoProc=model name : AMD Ryzen 9 3950X 16-Core Processor [2024-04-28 16:01:06] ALRB_OSMAJORVER=7 [2024-04-28 16:01:06] APPTAINER_ENVIRONMENT=/.singularity.d/env/91-environment.sh [2024-04-28 16:01:06] ATLAS_LOCAL_CURL_VERSION=7.29.0-x86_64-centos7 [2024-04-28 16:01:06] ALRB_cvmfs_condb_repo=/cvmfs/atlas-condb.cern.ch/repo [2024-04-28 16:01:06] ALRB_OSTYPE=Linux [2024-04-28 16:01:06] PWD=/var/lib/boinc-client/slots/37 [2024-04-28 16:01:06] GTAG=http://aipanda403.cern.ch/data/jobs/2024-04-25/BOINC_MCORE/6186367029.out [2024-04-28 16:01:06] WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC [2024-04-28 16:01:06] ATLAS_LOCAL_PSUTIL_VERSION=5.9.5-x86_64-centos7 [2024-04-28 16:01:06] APPTAINER_NAME=x86_64-centos7 [2024-04-28 16:01:06] ALRB_cvmfs_nightly_repo=/cvmfs/atlas-nightlies.cern.ch/repo [2024-04-28 16:01:06] LANG=en_GB.UTF-8 [2024-04-28 16:01:06] GRID_GLOBAL_JOBHOST=arc-boinc-06.cern.ch [2024-04-28 16:01:06] ATLAS_LOCAL_ASETUP_VERSION=V03-00-06 [2024-04-28 16:01:06] ALRB_requestedVersions=psutil:5.9.5-x86_64-centos7 logstash:2.3.0 curl:7.29.0-x86_64-centos7 python:3.9.18-x86_64-centos7 rcsetup:00-04-18 acm:0.1.29 asetup:V03-00-06 [2024-04-28 16:01:06] ALRB_tmpScratch=/var/lib/boinc-client/slots/37/.apptainertmp/boinc/.alrb [2024-04-28 16:01:06] ALRB_allowSL6onSL5=NO [2024-04-28 16:01:06] ALRB_infoUname=Linux BoincMint 6.5.0-28-generic #29~22.04.1-Ubuntu SMP PREEMPT_DYNAMIC Thu Apr 4 14:39:20 UTC 2 x86_64 x86_64 x86_64 GNU/Linux [2024-04-28 16:01:06] ATLAS_LOCAL_PYTHON_VERSION=3.9.18-x86_64-centos7 [2024-04-28 16:01:06] SINGULARITY_ENVIRONMENT=/.singularity.d/env/91-environment.sh [2024-04-28 16:01:06] ATLAS_POOLCOND_PATH=/cvmfs/atlas-condb.cern.ch/repo/conditions [2024-04-28 16:01:06] ALRB_tokensPanda=NO [2024-04-28 16:01:06] APPTAINER_CONTAINER=/cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-04-28 16:01:06] SINGULARITY_BIND=/cvmfs,/var/lib/boinc-client/slots/37 [2024-04-28 16:01:06] ALRB_availableToolsPost= advanced diagnostics helpme installPip installRpm printmenu queryC showversions [2024-04-28 16:01:06] ALRB_gridType=none [2024-04-28 16:01:06] SSL_CERT_DIR=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/etc/grid-security-emi/certificates [2024-04-28 16:01:06] ALRB_SFTNIGHT_LCG=/cvmfs/sft-nightlies.cern.ch/lcg [2024-04-28 16:01:06] ATHENA_PROC_NUMBER=12 [2024-04-28 16:01:06] HOME=/var/lib/boinc-client/slots/37 [2024-04-28 16:01:06] SHLVL=3 [2024-04-28 16:01:06] ATLAS_LOCAL_RCSETUP_PATH=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/rcSetup/00-04-18 [2024-04-28 16:01:06] ALRB_SFT_LCGEXT_MAP=/cvmfs/sft.cern.ch/lcg/mapfile.txt [2024-04-28 16:01:06] ALRB_cvmfs_sft_repo=/cvmfs/sft.cern.ch/lcg [2024-04-28 16:01:06] LANGUAGE=en_GB:en [2024-04-28 16:01:06] ALRB_ACM_PATH=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/acm/0.1.29/acm [2024-04-28 16:01:06] ATHENA_CORE_NUMBER=12 [2024-04-28 16:01:06] rcSetup=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/rcSetup/00-04-18 [2024-04-28 16:01:06] PANDA_PY3=1 [2024-04-28 16:01:06] PYTHONPATH=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/psutil/5.9.5-x86_64-centos7/lib/python3.9/site-packages:/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/logstash/2.3.0/lib/python3.9/ [2024-04-28 16:01:06] ALRB_USER_PLATFORM=centos7 [2024-04-28 16:01:06] LOGNAME=boinc [2024-04-28 16:01:06] ALRB_OSFLAVOR=centos [2024-04-28 16:01:06] ALRB_RELOCATEALRB=NO [2024-04-28 16:01:06] XDG_DATA_DIRS=/var/lib/flatpak/exports/share:/usr/local/share/:/usr/share/ [2024-04-28 16:01:06] GRID_GLOBAL_JOBID=lsHKDmiPDK5np2BDcpmwOghnABFKDmABFKDmJjxZDmj4HKDmmJBLjm [2024-04-28 16:01:06] ATLAS_LOCAL_ROOT_ARCH=x86_64 [2024-04-28 16:01:06] ATLAS_LOCAL_LOGSTASH_VERSION=2.3.0 [2024-04-28 16:01:06] JOURNAL_STREAM=8:19792 [2024-04-28 16:01:06] PROMPT_COMMAND=PS1="Apptainer> "; unset PROMPT_COMMAND [2024-04-28 16:01:06] PILOT_NOKILL=YES [2024-04-28 16:01:06] ALRB_motdExclusions= [2024-04-28 16:01:06] ALRB_cvmfs_ALRB=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase [2024-04-28 16:01:06] SINGULARITY_CONTAINER=/cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2024-04-28 16:01:06] SYSTEMD_EXEC_PID=2587 [2024-04-28 16:01:06] ALRB_cvmfs_unpacked_repo=/cvmfs/unpacked.cern.ch [2024-04-28 16:01:06] APPTAINER_BIND=/cvmfs,/var/lib/boinc-client/slots/37 [2024-04-28 16:01:06] FRONTIER_SERVER=(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://squid.vega [2024-04-28 16:01:06] ATLAS_LOCAL_CURL_PATH=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/curl/7.29.0-x86_64-centos7 [2024-04-28 16:01:06] ATLAS_LOCAL_ROOT=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64 [2024-04-28 16:01:06] RESULT_TEMPLATE=templates/ATLAS_OUT_2 [2024-04-28 16:01:06] ALRB_sedExclusions= [2024-04-28 16:01:06] ALRB_cvmfs_repo=/cvmfs/atlas.cern.ch/repo [2024-04-28 16:01:06] ATLAS_SW_BASE=/cvmfs [2024-04-28 16:01:06] PROJECT_ROOT=/boincdata/boinc/project/lhcathome [2024-04-28 16:01:06] ALRB_BUGMSG=,ROOT1, [2024-04-28 16:01:06] ALRB_availableToolsPre= lsetup [2024-04-28 16:01:06] _=/usr/bin/printenv [2024-04-28 16:01:06] [2024-04-28 16:01:06] 2024-04-28 15:01:05,887 [wrapper] Content of /var/lib/boinc-client/slots/37//setup.sh.local [2024-04-28 16:01:06] export FRONTIER_SERVER="(serverurl=http://atlascern-frontier.openhtc.io:8080/atlr)(serverurl=http://atlasfrontier-ai.cern.ch:8000/atlr)(proxyurl=http://db-atlas-squid.ndgf.org:3128)(proxyurl=http://sq [2024-04-28 16:01:06] [2024-04-28 16:01:06] ---- Build pilot cmd ---- [2024-04-28 16:01:06] /cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.18-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic [2024-04-28 16:01:06] [2024-04-28 16:01:06] ---- Ready to run pilot ---- [2024-04-28 16:01:06] [2024-04-28 16:01:06] 2024-04-28 15:01:05,891 [wrapper] ==== pilot stdout BEGIN ==== [2024-04-28 16:01:06] 2024-04-28 15:01:05,893 [wrapper] Started supervisor process (8402) (watching 8401) [2024-04-28 16:01:06] Traceback (most recent call last): [2024-04-28 16:01:06] File "/var/lib/boinc-client/slots/37/pilot3/pilot.py", line 40, in <module> [2024-04-28 16:01:06] from pilot.info import infosys [2024-04-28 16:01:06] File "/var/lib/boinc-client/slots/37/pilot3/pilot/info/__init__.py", line 39, in <module> [2024-04-28 16:01:06] from .infoservice import InfoService [2024-04-28 16:01:06] File "/var/lib/boinc-client/slots/37/pilot3/pilot/info/infoservice.py", line 43, in <module> [2024-04-28 16:01:06] from .extinfo import ExtInfoProvider [2024-04-28 16:01:06] File "/var/lib/boinc-client/slots/37/pilot3/pilot/info/extinfo.py", line 41, in <module> [2024-04-28 16:01:06] from .dataloader import DataLoader, merge_dict_data [2024-04-28 16:01:06] File "/var/lib/boinc-client/slots/37/pilot3/pilot/info/dataloader.py", line 44, in <module> [2024-04-28 16:01:06] from pilot.util.https import ctx [2024-04-28 16:01:06] File "/var/lib/boinc-client/slots/37/pilot3/pilot/util/https.py", line 37, in <module> [2024-04-28 16:01:06] import requests [2024-04-28 16:01:06] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/logstash/2.3.0/lib/python3.9/site-packages/requests-2.27.1-py3.6.egg/requests/__init__.py", line 43, in <module> [2024-04-28 16:01:06] import urllib3 [2024-04-28 16:01:06] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/logstash/2.3.0/lib/python3.9/site-packages/urllib3-1.26.8-py3.6.egg/urllib3/__init__.py", line 11, in <module> [2024-04-28 16:01:06] from . import exceptions [2024-04-28 16:01:06] File "/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/logstash/2.3.0/lib/python3.9/site-packages/urllib3-1.26.8-py3.6.egg/urllib3/exceptions.py", line 3, in <module> [2024-04-28 16:01:06] from .packages.six.moves.http_client import IncompleteRead as httplib_IncompleteRead [2024-04-28 16:01:06] File "<frozen importlib._bootstrap>", line 1007, in _find_and_load [2024-04-28 16:01:06] File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked [2024-04-28 16:01:06] File "<frozen importlib._bootstrap>", line 680, in _load_unlocked [2024-04-28 16:01:06] File "<frozen importlib._bootstrap_external>", line 846, in exec_module [2024-04-28 16:01:06] File "<frozen importlib._bootstrap_external>", line 982, in get_code [2024-04-28 16:01:06] File "<frozen importlib._bootstrap_external>", line 1039, in get_data [2024-04-28 16:01:06] OSError: [Errno 5] Input/output error: '/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/logstash/2.3.0/lib/python3.9/site-packages/urllib3-1.26.8-py3.6.egg/urllib3/packages/__init__.py' [2024-04-28 16:01:06] 2024-04-28 15:01:06,453 [wrapper] ==== pilot stdout END ==== [2024-04-28 16:01:06] 2024-04-28 15:01:06,455 [wrapper] ==== wrapper stdout RESUME ==== [2024-04-28 16:01:06] 2024-04-28 15:01:06,457 [wrapper] pilotpid: 8401 [2024-04-28 16:01:06] 2024-04-28 15:01:06,458 [wrapper] Pilot exit status: 1 [2024-04-28 16:01:06] 2024-04-28 15:01:06,470 [wrapper] pandaids: 6186367029 6186367029 [2024-04-28 16:01:06] 2024-04-28 15:01:06,498 [wrapper] cleanup: SIGTERM to supervisor_pilot 8406 8402 [2024-04-28 16:01:06] 2024-04-28 15:01:06,500 [wrapper] Test setup, not cleaning [2024-04-28 16:01:06] 2024-04-28 15:01:06,502 [wrapper] ==== wrapper stdout END ==== [2024-04-28 16:01:06] 2024-04-28 15:01:06,503 [wrapper] ==== wrapper stderr END ==== [2024-04-28 16:01:06] 2024-04-28 15:01:06,509 [wrapper] apfmon messages muted [2024-04-28 16:01:06] *** Error codes and diagnostics *** [2024-04-28 16:01:06] *** Listing of results directory *** [2024-04-28 16:01:06] total 1030848 [2024-04-28 16:01:06] drwx------ 4 boinc boinc 4096 Mar 6 11:00 pilot3 [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 462745 Apr 25 13:23 pilot3.tar.gz [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 6173 Apr 25 13:29 queuedata.json [2024-04-28 16:01:06] -rwx------ 1 boinc boinc 32211 Apr 25 13:29 runpilot2-wrapper.sh [2024-04-28 16:01:06] -rw------- 1 boinc boinc 2547 Apr 25 13:29 pandaJobData.out [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 100 Apr 28 14:06 wrapper_26015_x86_64-pc-linux-gnu [2024-04-28 16:01:06] -rwxr-xr-x 1 boinc boinc 7986 Apr 28 14:06 run_atlas [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 105 Apr 28 14:06 job.xml [2024-04-28 16:01:06] -rw-r--r-- 2 boinc boinc 17537 Apr 28 14:06 start_atlas.sh [2024-04-28 16:01:06] drwxrwx--x 2 boinc boinc 4096 Apr 28 14:06 shared [2024-04-28 16:01:06] -rw-r--r-- 2 boinc boinc 474773 Apr 28 14:06 input.tar.gz [2024-04-28 16:01:06] -rw-r--r-- 3 boinc boinc 525955323 Apr 28 14:06 EVNT.38106843._000325.pool.root.1 [2024-04-28 16:01:06] -rw-r--r-- 3 boinc boinc 525955323 Apr 28 14:06 ATLAS.root_0 [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 0 Apr 28 14:06 boinc_lockfile [2024-04-28 16:01:06] -rw------- 1 boinc boinc 0 Apr 28 14:06 agis_ddmendpoints.agis.ALL.json [2024-04-28 16:01:06] -rw------- 1 boinc boinc 1315307 Apr 28 14:06 cric_ddmendpoints.json [2024-04-28 16:01:06] -rw------- 1 boinc boinc 1000594 Apr 28 15:16 agis_schedconf.cvmfs.json [2024-04-28 16:01:06] -rw------- 1 boinc boinc 543 Apr 28 15:16 heartbeat.json [2024-04-28 16:01:06] -rw------- 1 boinc boinc 96 Apr 28 15:41 pilot_heartbeat.json [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 27 Apr 28 15:42 wrapper_checkpoint.txt [2024-04-28 16:01:06] -rw------- 1 boinc boinc 165547 Apr 28 15:42 pilotlog.txt [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 9536 Apr 28 16:00 init_data.xml [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 8192 Apr 28 16:00 boinc_mmap_file [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 530 Apr 28 16:00 boinc_task_state.xml [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 2547 Apr 28 16:01 pandaJob.out [2024-04-28 16:01:06] -rw------- 1 boinc boinc 424 Apr 28 16:01 setup.sh.local [2024-04-28 16:01:06] -rw------- 1 boinc boinc 15861 Apr 28 16:01 log.38106845._021262.job.log.1 [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 571 Apr 28 16:01 runtime_log [2024-04-28 16:01:06] -rw------- 1 boinc boinc 30720 Apr 28 16:01 result.tar.gz [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 10584 Apr 28 16:01 runtime_log.err [2024-04-28 16:01:06] -rw------- 1 boinc boinc 842 Apr 28 16:01 lsHKDmiPDK5np2BDcpmwOghnABFKDmABFKDmJjxZDmj4HKDmmJBLjm.diag [2024-04-28 16:01:06] -rw-r--r-- 1 boinc boinc 22084 Apr 28 16:01 stderr.txt [2024-04-28 16:01:06] No HITS result produced [2024-04-28 16:01:06] *** Contents of shared directory: *** [2024-04-28 16:01:06] total 514152 [2024-04-28 16:01:06] -rw-r--r-- 2 boinc boinc 17537 Apr 28 14:06 start_atlas.sh [2024-04-28 16:01:06] -rw-r--r-- 2 boinc boinc 474773 Apr 28 14:06 input.tar.gz [2024-04-28 16:01:06] -rw-r--r-- 3 boinc boinc 525955323 Apr 28 14:06 ATLAS.root_0 [2024-04-28 16:01:06] -rw------- 1 boinc boinc 30720 Apr 28 16:01 result.tar.gz 16:01:07 (3032): run_atlas exited; CPU time 3.269918 16:01:07 (3032): called boinc_finish(0) </stderr_txt> ]]>
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