Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:24:51 (3071331): wrapper (7.7.26015): starting
15:24:51 (3071331): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 15:24:51] Arguments: --nthreads 4
[2024-04-27 15:24:51] Threads: 4
[2024-04-27 15:24:51] Checking for CVMFS
[2024-04-27 15:24:51] No cvmfs_config command found, will try listing directly
[2024-04-27 15:24:51] CVMFS is ok
[2024-04-27 15:24:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 15:24:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 15:24:51] Further information can be found at the LHC@home message board.
[2024-04-27 15:24:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 15:24:51] Checking for apptainer binary...
[2024-04-27 15:24:51] which: no apptainer in ((null))
[2024-04-27 15:24:51] apptainer is not installed, using version from CVMFS
[2024-04-27 15:24:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 15:24:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-04-27 15:24:52] apptainer works
[2024-04-27 15:24:52] Set ATHENA_PROC_NUMBER=4
[2024-04-27 15:24:52] Set ATHENA_CORE_NUMBER=4
[2024-04-27 15:24:52] Starting ATLAS job with PandaID=6187028145
[2024-04-27 15:24:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 18:28:19]  *** The last 200 lines of the pilot log: ***
[2024-04-27 18:28:19]  direct_access_wan=False
[2024-04-27 18:28:19]  domain=
[2024-04-27 18:28:19]  filesize=297211
[2024-04-27 18:28:19]  filetype=log
[2024-04-27 18:28:19]  guid=009d04eb-a5aa-4213-8c88-0010de8d9d42
[2024-04-27 18:28:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 18:28:19]  is_tar=False
[2024-04-27 18:28:19]  lfn=log.38204359._005973.job.log.tgz.1
[2024-04-27 18:28:19]  mtime=0
[2024-04-27 18:28:19]  protocol_id=None
[2024-04-27 18:28:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 18:28:19]  replicas=None
[2024-04-27 18:28:19]  scope=mc23_13p6TeV
[2024-04-27 18:28:19]  status=None
[2024-04-27 18:28:19]  status_code=0
[2024-04-27 18:28:19]  storage_token=
[2024-04-27 18:28:19]  surl=/scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6187028145/log.38204359._005973.job.log.tgz.1
[2024-04-27 18:28:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/d3/log.38204359._005973.job.log.tgz.1
[2024-04-27 18:28:19]  workdir=None
[2024-04-27 18:28:19] ]
[2024-04-27 18:28:19] 2024-04-27 16:27:50,816 | INFO     | transferring file log.38204359._005973.job.log.tgz.1 from /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6187028145/log.38204359._005973.job.log.tgz.1 to /scratch/b
[2024-04-27 18:28:19] 2024-04-27 16:27:50,816 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6187028145/log.38204359._005973.job.log.tgz.1 /scratch/boinc/var/slot20/slots/0/lo
[2024-04-27 18:28:19] 2024-04-27 16:27:50,832 | INFO     | adding to output.list: log.38204359._005973.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/31/d3/log.38204359._005973.job.log.tg
[2024-04-27 18:28:19] 2024-04-27 16:27:50,833 | INFO     | summary of transferred files:
[2024-04-27 18:28:19] 2024-04-27 16:27:50,833 | INFO     |  -- lfn=log.38204359._005973.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 18:28:19] 2024-04-27 16:27:50,833 | INFO     | stage-out finished correctly
[2024-04-27 18:28:19] 2024-04-27 16:27:51,850 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 18:28:19] 2024-04-27 16:27:51,970 | INFO     | monitor loop #839: job 0:6187028145 is in state 'finished'
[2024-04-27 18:28:19] 2024-04-27 16:27:51,971 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 18:28:19] 2024-04-27 16:27:53,549 | INFO     | job 6187028145 has state=finished
[2024-04-27 18:28:19] 2024-04-27 16:27:53,549 | INFO     | preparing for final server update for job 6187028145 in state='finished'
[2024-04-27 18:28:19] 2024-04-27 16:27:53,550 | INFO     | this job has now completed (state=finished)
[2024-04-27 18:28:19] 2024-04-27 16:27:53,550 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 18:28:19] 2024-04-27 16:27:53,550 | INFO     | job 6187028145 has finished - writing final server update
[2024-04-27 18:28:19] 2024-04-27 16:27:53,550 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1509923/.job.ad'
[2024-04-27 18:28:19] 2024-04-27 16:27:53,550 | INFO     | total number of processed events: 400 (read)
[2024-04-27 18:28:19] 2024-04-27 16:27:53,555 | INFO     | executing command: lscpu
[2024-04-27 18:28:19] 2024-04-27 16:27:53,610 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-27 18:28:19] 2024-04-27 16:27:53,611 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 18:28:19] 2024-04-27 16:27:53,655 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 18:28:19] 2024-04-27 16:27:54,474 | INFO     | monitor loop #840: job 0:6187028145 is in state 'finished'
[2024-04-27 18:28:19] 2024-04-27 16:27:54,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 18:28:19] 2024-04-27 16:27:56,977 | INFO     | monitor loop #841: job 0:6187028145 is in state 'finished'
[2024-04-27 18:28:19] 2024-04-27 16:27:56,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 18:28:19] 2024-04-27 16:27:57,778 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-27 18:28:19] 2024-04-27 16:27:57,778 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6187028145/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 18:28:19] 2024-04-27 16:27:57,779 | INFO     | extracted standard info from prmon json
[2024-04-27 18:28:19] 2024-04-27 16:27:57,779 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 18:28:19] 2024-04-27 16:27:57,779 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 18:28:19] 2024-04-27 16:27:57,779 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 18:28:19] 2024-04-27 16:27:57,781 | INFO     | fitting pss+swap vs Time
[2024-04-27 18:28:19] 2024-04-27 16:27:57,783 | INFO     | current chi2=3.986352871377517 (change=15.880359472929994 %)
[2024-04-27 18:28:19] 2024-04-27 16:27:57,783 | INFO     | right removable region: 174
[2024-04-27 18:28:19] 2024-04-27 16:27:57,784 | INFO     | current chi2=2.2824781739375037 (change=51.835361871474674 %)
[2024-04-27 18:28:19] 2024-04-27 16:27:57,784 | INFO     | current chi2=0.8766553309293769 (change=61.59195119850551 %)
[2024-04-27 18:28:19] 2024-04-27 16:27:57,785 | INFO     | current chi2=0.8103548531002058 (change=7.562889939753551 %)
[2024-04-27 18:28:19] 2024-04-27 16:27:57,785 | INFO     | left removable region: 30
[2024-04-27 18:28:19] 2024-04-27 16:27:57,786 | INFO     | current memory leak: -1.47 B/s (using 144 data points, chi2=0.01)
[2024-04-27 18:28:19] 2024-04-27 16:27:57,786 | INFO     | ..............................
[2024-04-27 18:28:19] 2024-04-27 16:27:57,786 | INFO     | . Timing measurements:
[2024-04-27 18:28:19] 2024-04-27 16:27:57,786 | INFO     | . get job = 0 s
[2024-04-27 18:28:19] 2024-04-27 16:27:57,786 | INFO     | . initial setup = 1 s
[2024-04-27 18:28:19] 2024-04-27 16:27:57,786 | INFO     | . payload setup = 5 s
[2024-04-27 18:28:19] 2024-04-27 16:27:57,786 | INFO     | . stage-in = 5 s
[2024-04-27 18:28:19] 2024-04-27 16:27:57,786 | INFO     | . payload execution = 10944 s
[2024-04-27 18:28:19] 2024-04-27 16:27:57,786 | INFO     | . stage-out = 0 s
[2024-04-27 18:28:19] 2024-04-27 16:27:57,786 | INFO     | . log creation = 0 s
[2024-04-27 18:28:19] 2024-04-27 16:27:57,786 | INFO     | ..............................
[2024-04-27 18:28:19] 2024-04-27 16:27:57,840 | INFO     | 
[2024-04-27 18:28:19] 2024-04-27 16:27:57,840 | INFO     | job summary report
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | --------------------------------------------------
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | PanDA job id: 6187028145
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | task id: 38204359
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | errors: (none)
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | pilot state: finished 
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | transexitcode: 0
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | exeerrorcode: 0
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | exeerrordiag: 
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | exitcode: 0
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | exitmsg: OK
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | cpuconsumptiontime: 41021 s
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | nevents: 400
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | neventsw: 0
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | pid: 3095293
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | pgrp: 3095293
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | corecount: 4
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | event service: False
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | sizes: {0: 2375564, 1: 2375763, 10: 2375969, 11: 2375997, 10953: 2405105, 10956: 2414087, 10957: 2414271, 10963: 2414441}
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | --------------------------------------------------
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | 
[2024-04-27 18:28:19] 2024-04-27 16:27:57,841 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,860 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,861 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 18:28:19] 2024-04-27 16:27:57,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,861 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 18:28:19] 2024-04-27 16:27:57,861 | INFO     | job 6187028145 has completed (purged errors)
[2024-04-27 18:28:19] 2024-04-27 16:27:57,861 | INFO     | overall cleanup function is called
[2024-04-27 18:28:19] 2024-04-27 16:27:58,868 | INFO     | --- collectZombieJob: --- 10, [3095293]
[2024-04-27 18:28:19] 2024-04-27 16:27:58,868 | INFO     | zombie collector waiting for pid 3095293
[2024-04-27 18:28:19] 2024-04-27 16:27:58,868 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 18:28:19] 2024-04-27 16:27:59,873 | INFO     | collected zombie processes
[2024-04-27 18:28:19] 2024-04-27 16:27:59,873 | INFO     | will now attempt to kill all subprocesses of pid=3095293
[2024-04-27 18:28:19] 2024-04-27 16:28:00,029 | INFO     | process IDs to be killed: [3095293] (in reverse order)
[2024-04-27 18:28:19] 2024-04-27 16:28:00,142 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 18:28:19] 2024-04-27 16:28:00,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 18:28:19] 2024-04-27 16:28:00,149 | INFO     | did not find any defunct processes belonging to 3095293
[2024-04-27 18:28:19] 2024-04-27 16:28:00,154 | INFO     | did not find any defunct processes belonging to 3095293
[2024-04-27 18:28:19] 2024-04-27 16:28:00,154 | INFO     | ready for new job
[2024-04-27 18:28:19] 2024-04-27 16:28:00,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 18:28:19] 2024-04-27 16:28:00,156 | INFO     | *************************************
[2024-04-27 18:28:19] 2024-04-27 16:28:00,156 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 18:28:19] 2024-04-27 16:28:00,156 | INFO     | *************************************
[2024-04-27 18:28:19] 2024-04-27 16:28:00,156 | INFO     | 
[2024-04-27 18:28:19] 2024-04-27 16:28:00,159 | INFO     | architecture information:
[2024-04-27 18:28:19] 2024-04-27 16:28:00,159 | INFO     | executing command: cat /etc/os-release
[2024-04-27 18:28:19] 2024-04-27 16:28:00,172 | INFO     | cat /etc/os-release:
[2024-04-27 18:28:19] NAME="CentOS Linux"
[2024-04-27 18:28:19] VERSION="7 (Core)"
[2024-04-27 18:28:19] ID="centos"
[2024-04-27 18:28:19] ID_LIKE="rhel fedora"
[2024-04-27 18:28:19] VERSION_ID="7"
[2024-04-27 18:28:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 18:28:19] ANSI_COLOR="0;31"
[2024-04-27 18:28:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 18:28:19] HOME_URL="https://www.centos.org/"
[2024-04-27 18:28:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 18:28:19] 
[2024-04-27 18:28:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 18:28:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 18:28:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 18:28:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 18:28:19] 
[2024-04-27 18:28:19] 2024-04-27 16:28:00,173 | INFO     | *************************************
[2024-04-27 18:28:19] 2024-04-27 16:28:00,674 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-04-27 18:28:19] 2024-04-27 16:28:00,697 | INFO     | sufficient remaining disk space (616445247488 B)
[2024-04-27 18:28:19] 2024-04-27 16:28:00,698 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 18:28:19] 2024-04-27 16:28:00,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 18:28:19] 2024-04-27 16:28:00,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 18:28:19] 2024-04-27 16:28:00,698 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 18:28:19] 2024-04-27 16:28:00,699 | INFO     | aborting loop
[2024-04-27 18:28:19] 2024-04-27 16:28:00,699 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 18:28:19] 2024-04-27 16:28:00,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 18:28:19] 2024-04-27 16:28:00,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 18:28:19] 2024-04-27 16:28:01,188 | INFO     | all payload control threads have been joined
[2024-04-27 18:28:19] 2024-04-27 16:28:01,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 18:28:19] 2024-04-27 16:28:01,703 | INFO     | [job] retrieve thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:01,705 | INFO     | [job] job monitor thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:01,728 | INFO     | all data control threads have been joined
[2024-04-27 18:28:19] 2024-04-27 16:28:02,074 | INFO     | [data] copytool_in thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:02,151 | INFO     | [payload] failed_post thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:02,193 | INFO     | [payload] control thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:02,205 | INFO     | all job control threads have been joined
[2024-04-27 18:28:19] 2024-04-27 16:28:02,264 | INFO     | [payload] validate_post thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:02,422 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 18:28:19] 2024-04-27 16:28:02,628 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:02,733 | INFO     | [data] control thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:02,769 | INFO     | [job] validate thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:02,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 18:28:19] 2024-04-27 16:28:03,082 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:03,145 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:03,209 | INFO     | [job] control thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:03,405 | INFO     | [data] copytool_out thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:03,855 | INFO     | [job] queue monitor thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:06,427 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:11,608 | INFO     | job.realtimelogging is not enabled
[2024-04-27 18:28:19] 2024-04-27 16:28:12,613 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 18:28:19] 2024-04-27 16:28:13,094 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47199593428032)>', '<ExcThread(monitor, started 47199766763264)>']
[2024-04-27 18:28:19] 2024-04-27 16:28:13,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 18:28:19] 2024-04-27 16:28:13,758 | INFO     | [monitor] control thread has ended
[2024-04-27 18:28:19] 2024-04-27 16:28:18,119 | INFO     | all workflow threads have been joined
[2024-04-27 18:28:19] 2024-04-27 16:28:18,119 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 18:28:19] 2024-04-27 16:28:18,119 | INFO     | traces error code: 0
[2024-04-27 18:28:19] 2024-04-27 16:28:18,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 18:28:19] 2024-04-27 16:28:18,211 [wrapper] ==== pilot stdout END ====
[2024-04-27 18:28:19] 2024-04-27 16:28:18,214 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 18:28:19] 2024-04-27 16:28:18,218 [wrapper] pilotpid: 3076417
[2024-04-27 18:28:19] 2024-04-27 16:28:18,226 [wrapper] Pilot exit status: 0
[2024-04-27 18:28:19] 2024-04-27 16:28:18,262 [wrapper] pandaids: 6187028145
[2024-04-27 18:28:19] 2024-04-27 16:28:18,339 [wrapper] cleanup: SIGTERM to supervisor_pilot 3543960 3076418
[2024-04-27 18:28:19] 2024-04-27 16:28:18,341 [wrapper] Test setup, not cleaning
[2024-04-27 18:28:19] 2024-04-27 16:28:18,344 [wrapper] ==== wrapper stdout END ====
[2024-04-27 18:28:19] 2024-04-27 16:28:18,353 [wrapper] ==== wrapper stderr END ====
[2024-04-27 18:28:19] 2024-04-27 16:28:18,369 [wrapper] apfmon messages muted
[2024-04-27 18:28:19]  *** Error codes and diagnostics ***
[2024-04-27 18:28:19]     "exeErrorCode": 0,
[2024-04-27 18:28:19]     "exeErrorDiag": "",
[2024-04-27 18:28:19]     "pilotErrorCode": 0,
[2024-04-27 18:28:19]     "pilotErrorDiag": "",
[2024-04-27 18:28:19]  *** Listing of results directory ***
[2024-04-27 18:28:19] total 700560
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc    462745 Apr 26 01:16 pilot3.tar.gz
[2024-04-27 18:28:19] -rwx------ 1 boinc boinc     32211 Apr 26 01:37 runpilot2-wrapper.sh
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc      6173 Apr 26 01:37 queuedata.json
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc       100 Apr 27 15:24 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 18:28:19] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 15:24 run_atlas
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc       105 Apr 27 15:24 job.xml
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc      6663 Apr 27 15:24 init_data.xml
[2024-04-27 18:28:19] -rw-r--r-- 2 boinc boinc 518313056 Apr 27 15:24 EVNT.38204357._000063.pool.root.1
[2024-04-27 18:28:19] -rw-r--r-- 2 boinc boinc     17537 Apr 27 15:24 start_atlas.sh
[2024-04-27 18:28:19] drwxrwx--x 2 boinc boinc      4096 Apr 27 15:24 shared
[2024-04-27 18:28:19] -rw-r--r-- 2 boinc boinc    474791 Apr 27 15:24 input.tar.gz
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc         0 Apr 27 15:24 boinc_lockfile
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc      2621 Apr 27 15:24 pandaJob.out
[2024-04-27 18:28:19] -rw------- 1 boinc boinc       424 Apr 27 15:24 setup.sh.local
[2024-04-27 18:28:19] -rw------- 1 boinc boinc    997154 Apr 27 15:24 agis_schedconf.cvmfs.json
[2024-04-27 18:28:19] -rw------- 1 boinc boinc   1315307 Apr 27 15:24 cric_ddmendpoints.json
[2024-04-27 18:28:19] drwx------ 4 boinc boinc      4096 Apr 27 15:25 pilot3
[2024-04-27 18:28:19] -rw------- 1 boinc boinc 192886618 Apr 27 18:27 HITS.38204359._005973.pool.root.1
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc       531 Apr 27 18:27 boinc_task_state.xml
[2024-04-27 18:28:19] -rw------- 1 boinc boinc        95 Apr 27 18:27 pilot_heartbeat.json
[2024-04-27 18:28:19] -rw------- 1 boinc boinc      1051 Apr 27 18:27 memory_monitor_summary.json
[2024-04-27 18:28:19] -rw------- 1 boinc boinc         0 Apr 27 18:27 agis_ddmendpoints.agis.ALL.json
[2024-04-27 18:28:19] -rw------- 1 boinc boinc    297211 Apr 27 18:27 log.38204359._005973.job.log.tgz.1
[2024-04-27 18:28:19] -rw------- 1 boinc boinc      7736 Apr 27 18:27 heartbeat.json
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc        28 Apr 27 18:28 wrapper_checkpoint.txt
[2024-04-27 18:28:19] -rw------- 1 boinc boinc      4416 Apr 27 18:28 pilotlog.txt
[2024-04-27 18:28:19] -rw------- 1 boinc boinc   1044094 Apr 27 18:28 log.38204359._005973.job.log.1
[2024-04-27 18:28:19] -rw------- 1 boinc boinc       357 Apr 27 18:28 output.list
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc       620 Apr 27 18:28 runtime_log
[2024-04-27 18:28:19] -rw------- 1 boinc boinc   1361920 Apr 27 18:28 result.tar.gz
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc     11410 Apr 27 18:28 runtime_log.err
[2024-04-27 18:28:19] -rw------- 1 boinc boinc       657 Apr 27 18:28 B8ZKDmPpNK5nfZGDcpSWOuwoABFKDmABFKDmtxRSDm5nJKDmGYL9jn.diag
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc      8192 Apr 27 18:28 boinc_mmap_file
[2024-04-27 18:28:19] -rw-r--r-- 1 boinc boinc     21153 Apr 27 18:28 stderr.txt
[2024-04-27 18:28:19] HITS file was successfully produced:
[2024-04-27 18:28:19] -rw------- 1 boinc boinc 192886618 Apr 27 18:27 shared/HITS.pool.root.1
[2024-04-27 18:28:19]  *** Contents of shared directory: ***
[2024-04-27 18:28:19] total 696360
[2024-04-27 18:28:19] -rw-r--r-- 2 boinc boinc 518313056 Apr 27 15:24 ATLAS.root_0
[2024-04-27 18:28:19] -rw-r--r-- 2 boinc boinc     17537 Apr 27 15:24 start_atlas.sh
[2024-04-27 18:28:19] -rw-r--r-- 2 boinc boinc    474791 Apr 27 15:24 input.tar.gz
[2024-04-27 18:28:19] -rw------- 1 boinc boinc 192886618 Apr 27 18:27 HITS.pool.root.1
[2024-04-27 18:28:19] -rw------- 1 boinc boinc   1361920 Apr 27 18:28 result.tar.gz
18:28:20 (3071331): run_atlas exited; CPU time 40777.881361
18:28:20 (3071331): called boinc_finish(0)

</stderr_txt>
]]>

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