Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:04:33 (218356): wrapper (7.7.26015): starting
07:04:33 (218356): wrapper: running run_atlas (--nthreads 8)
[2024-04-30 07:04:33] Arguments: --nthreads 8
[2024-04-30 07:04:33] Threads: 8
[2024-04-30 07:04:33] Checking for CVMFS
[2024-04-30 07:04:34] Probing /cvmfs/atlas.cern.ch... OK
[2024-04-30 07:04:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-04-30 07:04:34] Running cvmfs_config stat atlas.cern.ch
[2024-04-30 07:04:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-04-30 07:04:35] 2.11.2.0 200009 2039 230420 132207 3 128 14690563 18432000 19887 130560 0 13004513 98.397 55344649 36629 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-04-30 07:04:35] CVMFS is ok
[2024-04-30 07:04:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-30 07:04:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-30 07:04:35] Further information can be found at the LHC@home message board.
[2024-04-30 07:04:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-30 07:04:35] Checking for apptainer binary...
[2024-04-30 07:04:35] Using apptainer found in PATH at /usr/bin/apptainer
[2024-04-30 07:04:35] Running /usr/bin/apptainer --version
[2024-04-30 07:04:35] apptainer version 1.3.0-1.el7
[2024-04-30 07:04:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-30 07:04:44] c6-12-27-1.aglt2.org
[2024-04-30 07:04:44] apptainer works
[2024-04-30 07:04:44] Set ATHENA_PROC_NUMBER=8
[2024-04-30 07:04:44] Set ATHENA_CORE_NUMBER=8
[2024-04-30 07:04:44] Starting ATLAS job with PandaID=6186962116
[2024-04-30 07:04:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-30 12:09:53]  *** The last 200 lines of the pilot log: ***
[2024-04-30 12:09:53]  ddm_activity=['write_lan', 'write_wan']
[2024-04-30 12:09:53]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-30 12:09:53]  direct_access_lan=False
[2024-04-30 12:09:53]  direct_access_wan=False
[2024-04-30 12:09:53]  domain=
[2024-04-30 12:09:53]  filesize=407099
[2024-04-30 12:09:53]  filetype=log
[2024-04-30 12:09:53]  guid=d46bedb9-48dc-4cf2-856f-11fa03d3fd5a
[2024-04-30 12:09:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-30 12:09:53]  is_tar=False
[2024-04-30 12:09:53]  lfn=log.38204279._026790.job.log.tgz.1
[2024-04-30 12:09:53]  mtime=0
[2024-04-30 12:09:53]  protocol_id=None
[2024-04-30 12:09:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-30 12:09:53]  replicas=None
[2024-04-30 12:09:53]  scope=mc23_13p6TeV
[2024-04-30 12:09:53]  status=None
[2024-04-30 12:09:53]  status_code=0
[2024-04-30 12:09:53]  storage_token=
[2024-04-30 12:09:53]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6186962116/log.38204279._026790.job.log.tgz.1
[2024-04-30 12:09:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/6d/log.38204279._026790.job.log.tgz.1
[2024-04-30 12:09:53]  workdir=None
[2024-04-30 12:09:53] ]
[2024-04-30 12:09:53] 2024-04-30 16:09:31,681 | INFO     | transferring file log.38204279._026790.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6186962116/log.38204279._026790.job.log.tgz.1 to /tmp/boinchome/slots/
[2024-04-30 12:09:53] 2024-04-30 16:09:31,681 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6186962116/log.38204279._026790.job.log.tgz.1 /tmp/boinchome/slots/1/log.38204279._026790.job
[2024-04-30 12:09:53] 2024-04-30 16:09:31,699 | INFO     | adding to output.list: log.38204279._026790.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/6d/log.38204279._026790.job.log.tg
[2024-04-30 12:09:53] 2024-04-30 16:09:31,700 | INFO     | summary of transferred files:
[2024-04-30 12:09:53] 2024-04-30 16:09:31,700 | INFO     |  -- lfn=log.38204279._026790.job.log.tgz.1, status_code=0, status=transferred
[2024-04-30 12:09:53] 2024-04-30 16:09:31,700 | INFO     | stage-out finished correctly
[2024-04-30 12:09:53] 2024-04-30 16:09:33,291 | WARNING  | process 326428 is no longer using CPU - aborting
[2024-04-30 12:09:53] 2024-04-30 16:09:33,291 | INFO     | will not send any job update
[2024-04-30 12:09:53] 2024-04-30 16:09:33,687 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-30 12:09:53] 2024-04-30 16:09:34,724 | INFO     | job 6186962116 has state=finished
[2024-04-30 12:09:53] 2024-04-30 16:09:34,724 | INFO     | preparing for final server update for job 6186962116 in state='finished'
[2024-04-30 12:09:53] 2024-04-30 16:09:34,724 | INFO     | this job has now completed (state=finished)
[2024-04-30 12:09:53] 2024-04-30 16:09:34,725 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-30 12:09:53] 2024-04-30 16:09:34,725 | INFO     | job 6186962116 has finished - writing final server update
[2024-04-30 12:09:53] 2024-04-30 16:09:34,725 | INFO     | total number of processed events: 400 (read)
[2024-04-30 12:09:53] 2024-04-30 16:09:34,729 | INFO     | executing command: lscpu
[2024-04-30 12:09:53] 2024-04-30 16:09:34,779 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-04-30 12:09:53] 2024-04-30 16:09:34,780 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-30 12:09:53] 2024-04-30 16:09:34,838 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-30 12:09:53] 2024-04-30 16:09:35,794 | INFO     | monitor loop #1200: job 0:6186962116 is in state 'finished'
[2024-04-30 12:09:53] 2024-04-30 16:09:35,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-30 12:09:53] 2024-04-30 16:09:38,296 | INFO     | monitor loop #1201: job 0:6186962116 is in state 'finished'
[2024-04-30 12:09:53] 2024-04-30 16:09:38,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-30 12:09:53] 2024-04-30 16:09:38,412 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-30 12:09:53] 2024-04-30 16:09:38,412 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6186962116/memory_monitor_summary.json (trf name=prmon)
[2024-04-30 12:09:53] 2024-04-30 16:09:38,413 | INFO     | extracted standard info from prmon json
[2024-04-30 12:09:53] 2024-04-30 16:09:38,413 | INFO     | extracted standard memory fields from prmon json
[2024-04-30 12:09:53] 2024-04-30 16:09:38,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-30 12:09:53] 2024-04-30 16:09:38,413 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-30 12:09:53] 2024-04-30 16:09:38,416 | INFO     | fitting pss+swap vs Time
[2024-04-30 12:09:53] 2024-04-30 16:09:38,419 | INFO     | current chi2=16.624403031645965 (change=0.5351944955413414 %)
[2024-04-30 12:09:53] 2024-04-30 16:09:38,419 | INFO     | right removable region: 290
[2024-04-30 12:09:53] 2024-04-30 16:09:38,420 | INFO     | current chi2=12.3755384018762 (change=25.956407709053103 %)
[2024-04-30 12:09:53] 2024-04-30 16:09:38,422 | INFO     | current chi2=10.240948806211778 (change=17.248458421338718 %)
[2024-04-30 12:09:53] 2024-04-30 16:09:38,422 | INFO     | left removable region: 20
[2024-04-30 12:09:53] 2024-04-30 16:09:38,423 | INFO     | current memory leak: 48.01 B/s (using 270 data points, chi2=7.07)
[2024-04-30 12:09:53] 2024-04-30 16:09:38,423 | INFO     | ..............................
[2024-04-30 12:09:53] 2024-04-30 16:09:38,423 | INFO     | . Timing measurements:
[2024-04-30 12:09:53] 2024-04-30 16:09:38,424 | INFO     | . get job = 0 s
[2024-04-30 12:09:53] 2024-04-30 16:09:38,424 | INFO     | . initial setup = 3 s
[2024-04-30 12:09:53] 2024-04-30 16:09:38,424 | INFO     | . payload setup = 44 s
[2024-04-30 12:09:53] 2024-04-30 16:09:38,424 | INFO     | . stage-in = 0 s
[2024-04-30 12:09:53] 2024-04-30 16:09:38,424 | INFO     | . payload execution = 18090 s
[2024-04-30 12:09:53] 2024-04-30 16:09:38,424 | INFO     | . stage-out = 1 s
[2024-04-30 12:09:53] 2024-04-30 16:09:38,424 | INFO     | . log creation = 0 s
[2024-04-30 12:09:53] 2024-04-30 16:09:38,424 | INFO     | ..............................
[2024-04-30 12:09:53] 2024-04-30 16:09:38,474 | INFO     | 
[2024-04-30 12:09:53] 2024-04-30 16:09:38,474 | INFO     | job summary report
[2024-04-30 12:09:53] 2024-04-30 16:09:38,474 | INFO     | --------------------------------------------------
[2024-04-30 12:09:53] 2024-04-30 16:09:38,474 | INFO     | PanDA job id: 6186962116
[2024-04-30 12:09:53] 2024-04-30 16:09:38,474 | INFO     | task id: 38204279
[2024-04-30 12:09:53] 2024-04-30 16:09:38,474 | INFO     | errors: (none)
[2024-04-30 12:09:53] 2024-04-30 16:09:38,474 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-30 12:09:53] 2024-04-30 16:09:38,474 | INFO     | pilot state: finished 
[2024-04-30 12:09:53] 2024-04-30 16:09:38,474 | INFO     | transexitcode: 0
[2024-04-30 12:09:53] 2024-04-30 16:09:38,474 | INFO     | exeerrorcode: 0
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | exeerrordiag: 
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | exitcode: 0
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | exitmsg: OK
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | cpuconsumptiontime: 47384 s
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | nevents: 400
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | neventsw: 0
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | pid: 326428
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | pgrp: 326428
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | corecount: 8
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | event service: False
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | sizes: {0: 2374723, 1: 2375658, 2: 2375658, 13: 2375686, 23: 2375742, 31: 2375976, 34: 2376132, 18138: 2408021, 18139: 2416981, 18141: 2417037, 18146: 2417207}
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | --------------------------------------------------
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | 
[2024-04-30 12:09:53] 2024-04-30 16:09:38,475 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,495 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,496 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-30 12:09:53] 2024-04-30 16:09:38,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,496 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-30 12:09:53] 2024-04-30 16:09:38,496 | INFO     | job 6186962116 has completed (purged errors)
[2024-04-30 12:09:53] 2024-04-30 16:09:38,496 | INFO     | overall cleanup function is called
[2024-04-30 12:09:53] 2024-04-30 16:09:39,502 | INFO     | --- collectZombieJob: --- 10, [326428]
[2024-04-30 12:09:53] 2024-04-30 16:09:39,503 | INFO     | zombie collector waiting for pid 326428
[2024-04-30 12:09:53] 2024-04-30 16:09:39,503 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-30 12:09:53] 2024-04-30 16:09:40,507 | INFO     | collected zombie processes
[2024-04-30 12:09:53] 2024-04-30 16:09:40,508 | INFO     | will now attempt to kill all subprocesses of pid=326428
[2024-04-30 12:09:53] 2024-04-30 16:09:40,752 | INFO     | process IDs to be killed: [326428] (in reverse order)
[2024-04-30 12:09:53] 2024-04-30 16:09:40,894 | WARNING  | found no corresponding commands to process id(s)
[2024-04-30 12:09:53] 2024-04-30 16:09:40,894 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-30 12:09:53] 2024-04-30 16:09:40,909 | INFO     | did not find any defunct processes belonging to 326428
[2024-04-30 12:09:53] 2024-04-30 16:09:40,924 | INFO     | did not find any defunct processes belonging to 326428
[2024-04-30 12:09:53] 2024-04-30 16:09:40,924 | INFO     | ready for new job
[2024-04-30 12:09:53] 2024-04-30 16:09:40,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-30 12:09:53] 2024-04-30 16:09:40,926 | INFO     | *************************************
[2024-04-30 12:09:53] 2024-04-30 16:09:40,926 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-30 12:09:53] 2024-04-30 16:09:40,926 | INFO     | *************************************
[2024-04-30 12:09:53] 2024-04-30 16:09:40,926 | INFO     | 
[2024-04-30 12:09:53] 2024-04-30 16:09:40,930 | INFO     | architecture information:
[2024-04-30 12:09:53] 2024-04-30 16:09:40,931 | INFO     | executing command: cat /etc/os-release
[2024-04-30 12:09:53] 2024-04-30 16:09:40,946 | INFO     | cat /etc/os-release:
[2024-04-30 12:09:53] NAME="CentOS Linux"
[2024-04-30 12:09:53] VERSION="7 (Core)"
[2024-04-30 12:09:53] ID="centos"
[2024-04-30 12:09:53] ID_LIKE="rhel fedora"
[2024-04-30 12:09:53] VERSION_ID="7"
[2024-04-30 12:09:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-30 12:09:53] ANSI_COLOR="0;31"
[2024-04-30 12:09:53] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-30 12:09:53] HOME_URL="https://www.centos.org/"
[2024-04-30 12:09:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-30 12:09:53] 
[2024-04-30 12:09:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-30 12:09:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-30 12:09:53] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-30 12:09:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-30 12:09:53] 
[2024-04-30 12:09:53] 2024-04-30 16:09:40,946 | INFO     | *************************************
[2024-04-30 12:09:53] 2024-04-30 16:09:41,449 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2024-04-30 12:09:53] 2024-04-30 16:09:41,466 | INFO     | sufficient remaining disk space (98977185792 B)
[2024-04-30 12:09:53] 2024-04-30 16:09:41,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-30 12:09:53] 2024-04-30 16:09:41,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-30 12:09:53] 2024-04-30 16:09:41,467 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-30 12:09:53] 2024-04-30 16:09:41,467 | INFO     | found 0 job(s) in 20 queues
[2024-04-30 12:09:53] 2024-04-30 16:09:41,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-30 12:09:53] 2024-04-30 16:09:41,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-30 12:09:53] 2024-04-30 16:09:41,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-30 12:09:53] 2024-04-30 16:09:41,805 | INFO     | aborting loop
[2024-04-30 12:09:53] 2024-04-30 16:09:42,089 | INFO     | all data control threads have been joined
[2024-04-30 12:09:53] 2024-04-30 16:09:42,191 | INFO     | all payload control threads have been joined
[2024-04-30 12:09:53] 2024-04-30 16:09:42,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-30 12:09:53] 2024-04-30 16:09:42,471 | INFO     | [job] retrieve thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:42,810 | INFO     | [job] job monitor thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:42,891 | INFO     | all job control threads have been joined
[2024-04-30 12:09:53] 2024-04-30 16:09:42,922 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:43,026 | INFO     | [data] copytool_in thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:43,064 | INFO     | [payload] failed_post thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:43,095 | INFO     | [data] control thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:43,194 | INFO     | [payload] execute_payloads thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:43,197 | INFO     | [payload] control thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:43,259 | INFO     | [job] create_data_payload thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:43,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-30 12:09:53] 2024-04-30 16:09:43,562 | INFO     | [job] validate thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:43,706 | INFO     | [payload] validate_pre thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:43,896 | INFO     | [job] control thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:44,046 | INFO     | [payload] validate_post thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:44,284 | INFO     | [data] copytool_out thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:44,286 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-30 12:09:53] 2024-04-30 16:09:44,490 | INFO     | [job] queue monitor thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:48,293 | INFO     | [data] queue_monitor thread has finished
[2024-04-30 12:09:53] 2024-04-30 16:09:48,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298556405568)>', '<ExcThread(monitor, started 140298059511552)>']
[2024-04-30 12:09:53] 2024-04-30 16:09:48,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-30 12:09:53] 2024-04-30 16:09:48,501 | INFO     | [monitor] control thread has ended
[2024-04-30 12:09:53] 2024-04-30 16:09:53,449 | INFO     | all workflow threads have been joined
[2024-04-30 12:09:53] 2024-04-30 16:09:53,449 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-30 12:09:53] 2024-04-30 16:09:53,449 | INFO     | traces error code: 0
[2024-04-30 12:09:53] 2024-04-30 16:09:53,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-30 12:09:53] 2024-04-30 16:09:53,565 [wrapper] ==== pilot stdout END ====
[2024-04-30 12:09:53] 2024-04-30 16:09:53,567 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-30 12:09:53] 2024-04-30 16:09:53,569 [wrapper] pilotpid: 259117
[2024-04-30 12:09:53] 2024-04-30 16:09:53,571 [wrapper] Pilot exit status: 0
[2024-04-30 12:09:53] 2024-04-30 16:09:53,578 [wrapper] pandaids: 6186962116
[2024-04-30 12:09:53] 2024-04-30 16:09:53,652 [wrapper] cleanup: SIGTERM to supervisor_pilot  93837 259118
[2024-04-30 12:09:53] 2024-04-30 16:09:53,653 [wrapper] Test setup, not cleaning
[2024-04-30 12:09:53] 2024-04-30 16:09:53,655 [wrapper] ==== wrapper stdout END ====
[2024-04-30 12:09:53] 2024-04-30 16:09:53,657 [wrapper] ==== wrapper stderr END ====
[2024-04-30 12:09:53] 2024-04-30 16:09:53,660 [wrapper] apfmon messages muted
[2024-04-30 12:09:53]  *** Error codes and diagnostics ***
[2024-04-30 12:09:53]     "exeErrorCode": 0,
[2024-04-30 12:09:53]     "exeErrorDiag": "",
[2024-04-30 12:09:53]     "pilotErrorCode": 0,
[2024-04-30 12:09:53]     "pilotErrorDiag": "",
[2024-04-30 12:09:53]  *** Listing of results directory ***
[2024-04-30 12:09:53] total 624428
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas    462745 Apr 25 19:01 pilot3.tar.gz
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas      6173 Apr 25 19:10 queuedata.json
[2024-04-30 12:09:53] -rwx------ 1 boincer umatlas     32211 Apr 25 19:10 runpilot2-wrapper.sh
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas       100 Apr 30 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-30 12:09:53] -rwxr-xr-x 1 boincer umatlas      7986 Apr 30 07:04 run_atlas
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas       105 Apr 30 07:04 job.xml
[2024-04-30 12:09:53] -rw-r--r-- 2 boincer umatlas 454155081 Apr 30 07:04 EVNT.38204277._000910.pool.root.1
[2024-04-30 12:09:53] -rw-r--r-- 2 boincer umatlas    474782 Apr 30 07:04 input.tar.gz
[2024-04-30 12:09:53] -rw-r--r-- 2 boincer umatlas     17537 Apr 30 07:04 start_atlas.sh
[2024-04-30 12:09:53] drwxrwx--x 2 boincer umatlas      4096 Apr 30 07:04 shared
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas         0 Apr 30 07:04 boinc_lockfile
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas      2584 Apr 30 07:04 pandaJob.out
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas       467 Apr 30 07:04 setup.sh.local
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas   1005148 Apr 30 07:06 agis_schedconf.cvmfs.json
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas   1315265 Apr 30 07:06 cric_ddmendpoints.json
[2024-04-30 12:09:53] drwx------ 4 boincer umatlas      4096 Apr 30 07:06 pilot3
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas      6385 Apr 30 12:02 init_data.xml
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas 178071196 Apr 30 12:08 HITS.38204279._026790.pool.root.1
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas       532 Apr 30 12:09 boinc_task_state.xml
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas      1060 Apr 30 12:09 memory_monitor_summary.json
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas         0 Apr 30 12:09 agis_ddmendpoints.agis.ALL.json
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas    407099 Apr 30 12:09 log.38204279._026790.job.log.tgz.1
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas      7745 Apr 30 12:09 heartbeat.json
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas        95 Apr 30 12:09 pilot_heartbeat.json
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas      8192 Apr 30 12:09 boinc_mmap_file
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas        28 Apr 30 12:09 wrapper_checkpoint.txt
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas      4334 Apr 30 12:09 pilotlog.txt
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas   1439145 Apr 30 12:09 log.38204279._026790.job.log.1
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas       357 Apr 30 12:09 output.list
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas       620 Apr 30 12:09 runtime_log
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas   1863680 Apr 30 12:09 result.tar.gz
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas       650 Apr 30 12:09 TbqLDmPPNK5n9Rq4apoT9bVoABFKDmABFKDmtztZDmZCPKDmdE3q6m.diag
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas     11415 Apr 30 12:09 runtime_log.err
[2024-04-30 12:09:53] -rw-r--r-- 1 boincer umatlas     21095 Apr 30 12:09 stderr.txt
[2024-04-30 12:09:53] HITS file was successfully produced:
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas 178071196 Apr 30 12:08 shared/HITS.pool.root.1
[2024-04-30 12:09:53]  *** Contents of shared directory: ***
[2024-04-30 12:09:53] total 619724
[2024-04-30 12:09:53] -rw-r--r-- 2 boincer umatlas 454155081 Apr 30 07:04 ATLAS.root_0
[2024-04-30 12:09:53] -rw-r--r-- 2 boincer umatlas    474782 Apr 30 07:04 input.tar.gz
[2024-04-30 12:09:53] -rw-r--r-- 2 boincer umatlas     17537 Apr 30 07:04 start_atlas.sh
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas 178071196 Apr 30 12:08 HITS.pool.root.1
[2024-04-30 12:09:53] -rw------- 1 boincer umatlas   1863680 Apr 30 12:09 result.tar.gz
12:09:55 (218356): run_atlas exited; CPU time 47043.321271
12:09:55 (218356): called boinc_finish(0)

</stderr_txt>
]]>

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