Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:56:34 (2883719): wrapper (7.7.26015): starting
14:56:34 (2883719): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 14:56:34] Arguments: --nthreads 4
[2024-04-27 14:56:34] Threads: 4
[2024-04-27 14:56:34] Checking for CVMFS
[2024-04-27 14:56:34] No cvmfs_config command found, will try listing directly
[2024-04-27 14:56:34] CVMFS is ok
[2024-04-27 14:56:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 14:56:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 14:56:34] Further information can be found at the LHC@home message board.
[2024-04-27 14:56:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 14:56:34] Checking for apptainer binary...
[2024-04-27 14:56:34] which: no apptainer in ((null))
[2024-04-27 14:56:34] apptainer is not installed, using version from CVMFS
[2024-04-27 14:56:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 14:56:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2024-04-27 14:56:35] apptainer works
[2024-04-27 14:56:35] Set ATHENA_PROC_NUMBER=4
[2024-04-27 14:56:35] Set ATHENA_CORE_NUMBER=4
[2024-04-27 14:56:35] Starting ATLAS job with PandaID=6186287441
[2024-04-27 14:56:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 20:02:50]  *** The last 200 lines of the pilot log: ***
[2024-04-27 20:02:51]  dataset=mc23_13p6TeV.543312.MGPy8EG_A14N23LO_TT_tN1_800_500_MS_LepBR.simul.log.e8551_e8528_s4159_tid38221834_00
[2024-04-27 20:02:51]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 20:02:51]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 20:02:51]  direct_access_lan=False
[2024-04-27 20:02:51]  direct_access_wan=False
[2024-04-27 20:02:51]  domain=
[2024-04-27 20:02:51]  filesize=377346
[2024-04-27 20:02:51]  filetype=log
[2024-04-27 20:02:51]  guid=5c2ef104-b3ff-4e55-9828-9f1fd7f4fc15
[2024-04-27 20:02:51]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 20:02:51]  is_tar=False
[2024-04-27 20:02:51]  lfn=log.38221834._000225.job.log.tgz.1
[2024-04-27 20:02:51]  mtime=0
[2024-04-27 20:02:51]  protocol_id=None
[2024-04-27 20:02:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 20:02:51]  replicas=None
[2024-04-27 20:02:51]  scope=mc23_13p6TeV
[2024-04-27 20:02:51]  status=None
[2024-04-27 20:02:51]  status_code=0
[2024-04-27 20:02:51]  storage_token=
[2024-04-27 20:02:51]  surl=/scratch/boinc/var/slot12/slots/0/PanDA_Pilot-6186287441/log.38221834._000225.job.log.tgz.1
[2024-04-27 20:02:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/24/log.38221834._000225.job.log.tgz.1
[2024-04-27 20:02:51]  workdir=None
[2024-04-27 20:02:51] ]
[2024-04-27 20:02:51] 2024-04-27 18:02:25,332 | INFO     | transferring file log.38221834._000225.job.log.tgz.1 from /scratch/boinc/var/slot12/slots/0/PanDA_Pilot-6186287441/log.38221834._000225.job.log.tgz.1 to /scratch/b
[2024-04-27 20:02:51] 2024-04-27 18:02:25,332 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot12/slots/0/PanDA_Pilot-6186287441/log.38221834._000225.job.log.tgz.1 /scratch/boinc/var/slot12/slots/0/lo
[2024-04-27 20:02:51] 2024-04-27 18:02:25,347 | INFO     | adding to output.list: log.38221834._000225.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/24/log.38221834._000225.job.log.tg
[2024-04-27 20:02:51] 2024-04-27 18:02:25,348 | INFO     | summary of transferred files:
[2024-04-27 20:02:51] 2024-04-27 18:02:25,348 | INFO     |  -- lfn=log.38221834._000225.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 20:02:51] 2024-04-27 18:02:25,348 | INFO     | stage-out finished correctly
[2024-04-27 20:02:51] 2024-04-27 18:02:25,771 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 20:02:51] 2024-04-27 18:02:27,169 | INFO     | job 6186287441 has state=finished
[2024-04-27 20:02:51] 2024-04-27 18:02:27,169 | INFO     | preparing for final server update for job 6186287441 in state='finished'
[2024-04-27 20:02:51] 2024-04-27 18:02:27,170 | INFO     | this job has now completed (state=finished)
[2024-04-27 20:02:51] 2024-04-27 18:02:27,170 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 20:02:51] 2024-04-27 18:02:27,170 | INFO     | job 6186287441 has finished - writing final server update
[2024-04-27 20:02:51] 2024-04-27 18:02:27,170 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1822822/.job.ad'
[2024-04-27 20:02:51] 2024-04-27 18:02:27,170 | INFO     | total number of processed events: 400 (read)
[2024-04-27 20:02:51] 2024-04-27 18:02:27,173 | INFO     | executing command: lscpu
[2024-04-27 20:02:51] 2024-04-27 18:02:27,210 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-27 20:02:51] 2024-04-27 18:02:27,211 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 20:02:51] 2024-04-27 18:02:27,233 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 20:02:51] 2024-04-27 18:02:27,646 | INFO     | monitor loop #1409: job 0:6186287441 is in state 'finished'
[2024-04-27 20:02:51] 2024-04-27 18:02:27,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 20:02:51] 2024-04-27 18:02:29,996 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 20:02:51] 2024-04-27 18:02:29,996 | INFO     | using path: /scratch/boinc/var/slot12/slots/0/PanDA_Pilot-6186287441/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 20:02:51] 2024-04-27 18:02:29,997 | INFO     | extracted standard info from prmon json
[2024-04-27 20:02:51] 2024-04-27 18:02:29,997 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 20:02:51] 2024-04-27 18:02:29,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 20:02:51] 2024-04-27 18:02:29,998 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 20:02:51] 2024-04-27 18:02:30,004 | INFO     | fitting pss+swap vs Time
[2024-04-27 20:02:51] 2024-04-27 18:02:30,011 | INFO     | current chi2=3.4553093762964755 (change=18.9504645506866 %)
[2024-04-27 20:02:51] 2024-04-27 18:02:30,011 | INFO     | right removable region: 295
[2024-04-27 20:02:51] 2024-04-27 18:02:30,014 | INFO     | current chi2=2.1293305735559427 (change=50.053313608141224 %)
[2024-04-27 20:02:51] 2024-04-27 18:02:30,017 | INFO     | current chi2=0.9037833219599695 (change=57.55551847214272 %)
[2024-04-27 20:02:51] 2024-04-27 18:02:30,020 | INFO     | current chi2=0.8467473144865384 (change=6.31080548706533 %)
[2024-04-27 20:02:51] 2024-04-27 18:02:30,020 | INFO     | left removable region: 30
[2024-04-27 20:02:51] 2024-04-27 18:02:30,023 | INFO     | current memory leak: 1.73 B/s (using 265 data points, chi2=0.00)
[2024-04-27 20:02:51] 2024-04-27 18:02:30,023 | INFO     | ..............................
[2024-04-27 20:02:51] 2024-04-27 18:02:30,023 | INFO     | . Timing measurements:
[2024-04-27 20:02:51] 2024-04-27 18:02:30,023 | INFO     | . get job = 0 s
[2024-04-27 20:02:51] 2024-04-27 18:02:30,024 | INFO     | . initial setup = 1 s
[2024-04-27 20:02:51] 2024-04-27 18:02:30,024 | INFO     | . payload setup = 6 s
[2024-04-27 20:02:51] 2024-04-27 18:02:30,024 | INFO     | . stage-in = 0 s
[2024-04-27 20:02:51] 2024-04-27 18:02:30,024 | INFO     | . payload execution = 18313 s
[2024-04-27 20:02:51] 2024-04-27 18:02:30,024 | INFO     | . stage-out = 0 s
[2024-04-27 20:02:51] 2024-04-27 18:02:30,024 | INFO     | . log creation = 0 s
[2024-04-27 20:02:51] 2024-04-27 18:02:30,024 | INFO     | ..............................
[2024-04-27 20:02:51] 2024-04-27 18:02:30,117 | INFO     | 
[2024-04-27 20:02:51] 2024-04-27 18:02:30,117 | INFO     | job summary report
[2024-04-27 20:02:51] 2024-04-27 18:02:30,117 | INFO     | --------------------------------------------------
[2024-04-27 20:02:51] 2024-04-27 18:02:30,117 | INFO     | PanDA job id: 6186287441
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | task id: 38221834
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | errors: (none)
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | pilot state: finished 
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | transexitcode: 0
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | exeerrorcode: 0
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | exeerrordiag: 
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | exitcode: 0
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | exitmsg: OK
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | cpuconsumptiontime: 69777 s
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | nevents: 400
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | neventsw: 0
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | pid: 2894782
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | pgrp: 2894782
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | corecount: 4
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | event service: False
[2024-04-27 20:02:51] 2024-04-27 18:02:30,118 | INFO     | sizes: {0: 2375653, 4: 2375859, 11: 2375887, 18323: 2408508, 18324: 2408507, 18325: 2417729, 18329: 2417843}
[2024-04-27 20:02:51] 2024-04-27 18:02:30,119 | INFO     | --------------------------------------------------
[2024-04-27 20:02:51] 2024-04-27 18:02:30,119 | INFO     | 
[2024-04-27 20:02:51] 2024-04-27 18:02:30,119 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2024-04-27 20:02:51] 2024-04-27 18:02:30,133 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,135 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,135 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,135 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,135 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,135 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 20:02:51] 2024-04-27 18:02:30,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,135 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 20:02:51] 2024-04-27 18:02:30,135 | INFO     | job 6186287441 has completed (purged errors)
[2024-04-27 20:02:51] 2024-04-27 18:02:30,135 | INFO     | overall cleanup function is called
[2024-04-27 20:02:51] 2024-04-27 18:02:31,141 | INFO     | --- collectZombieJob: --- 10, [2894782]
[2024-04-27 20:02:51] 2024-04-27 18:02:31,142 | INFO     | zombie collector waiting for pid 2894782
[2024-04-27 20:02:51] 2024-04-27 18:02:31,142 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 20:02:51] 2024-04-27 18:02:32,146 | INFO     | collected zombie processes
[2024-04-27 20:02:51] 2024-04-27 18:02:32,147 | INFO     | will now attempt to kill all subprocesses of pid=2894782
[2024-04-27 20:02:51] 2024-04-27 18:02:32,260 | INFO     | process IDs to be killed: [2894782] (in reverse order)
[2024-04-27 20:02:51] 2024-04-27 18:02:32,329 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 20:02:51] 2024-04-27 18:02:32,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 20:02:51] 2024-04-27 18:02:32,333 | INFO     | did not find any defunct processes belonging to 2894782
[2024-04-27 20:02:51] 2024-04-27 18:02:32,336 | INFO     | did not find any defunct processes belonging to 2894782
[2024-04-27 20:02:51] 2024-04-27 18:02:32,336 | INFO     | ready for new job
[2024-04-27 20:02:51] 2024-04-27 18:02:32,336 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 20:02:51] 2024-04-27 18:02:32,338 | INFO     | *************************************
[2024-04-27 20:02:51] 2024-04-27 18:02:32,338 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 20:02:51] 2024-04-27 18:02:32,338 | INFO     | *************************************
[2024-04-27 20:02:51] 2024-04-27 18:02:32,338 | INFO     | 
[2024-04-27 20:02:51] 2024-04-27 18:02:32,339 | INFO     | architecture information:
[2024-04-27 20:02:51] 2024-04-27 18:02:32,340 | INFO     | executing command: cat /etc/os-release
[2024-04-27 20:02:51] 2024-04-27 18:02:32,350 | INFO     | cat /etc/os-release:
[2024-04-27 20:02:51] NAME="CentOS Linux"
[2024-04-27 20:02:51] VERSION="7 (Core)"
[2024-04-27 20:02:51] ID="centos"
[2024-04-27 20:02:51] ID_LIKE="rhel fedora"
[2024-04-27 20:02:51] VERSION_ID="7"
[2024-04-27 20:02:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 20:02:51] ANSI_COLOR="0;31"
[2024-04-27 20:02:51] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 20:02:51] HOME_URL="https://www.centos.org/"
[2024-04-27 20:02:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 20:02:51] 
[2024-04-27 20:02:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 20:02:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 20:02:51] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 20:02:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 20:02:51] 
[2024-04-27 20:02:51] 2024-04-27 18:02:32,351 | INFO     | *************************************
[2024-04-27 20:02:51] 2024-04-27 18:02:32,854 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2024-04-27 20:02:51] 2024-04-27 18:02:32,871 | INFO     | sufficient remaining disk space (1630611177472 B)
[2024-04-27 20:02:51] 2024-04-27 18:02:32,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 20:02:51] 2024-04-27 18:02:32,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 20:02:51] 2024-04-27 18:02:32,872 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 20:02:51] 2024-04-27 18:02:32,872 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 20:02:51] 2024-04-27 18:02:32,872 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 20:02:51] 2024-04-27 18:02:32,872 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 20:02:51] 2024-04-27 18:02:33,020 | INFO     | all job control threads have been joined
[2024-04-27 20:02:51] 2024-04-27 18:02:33,235 | INFO     | all payload control threads have been joined
[2024-04-27 20:02:51] 2024-04-27 18:02:33,414 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 20:02:51] 2024-04-27 18:02:33,417 | INFO     | all data control threads have been joined
[2024-04-27 20:02:51] 2024-04-27 18:02:33,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 20:02:51] 2024-04-27 18:02:33,662 | INFO     | aborting loop
[2024-04-27 20:02:51] 2024-04-27 18:02:33,876 | INFO     | [job] retrieve thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:33,957 | INFO     | [data] copytool_in thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:34,025 | INFO     | [job] control thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:34,055 | INFO     | [job] validate thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:34,241 | INFO     | [payload] control thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:34,279 | INFO     | [payload] failed_post thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:34,292 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:34,422 | INFO     | [data] control thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:34,666 | INFO     | [job] job monitor thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:34,777 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:34,869 | INFO     | [payload] validate_post thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:35,126 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 20:02:51] 2024-04-27 18:02:35,286 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:35,420 | INFO     | [data] copytool_out thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:36,131 | INFO     | [job] queue monitor thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:36,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 20:02:51] 2024-04-27 18:02:40,361 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:43,042 | INFO     | job.realtimelogging is not enabled
[2024-04-27 20:02:51] 2024-04-27 18:02:44,047 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 20:02:51] 2024-04-27 18:02:45,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47342064526400)>', '<ExcThread(monitor, started 47342239962880)>']
[2024-04-27 20:02:51] 2024-04-27 18:02:45,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 20:02:51] 2024-04-27 18:02:45,933 | INFO     | [monitor] control thread has ended
[2024-04-27 20:02:51] 2024-04-27 18:02:50,216 | INFO     | all workflow threads have been joined
[2024-04-27 20:02:51] 2024-04-27 18:02:50,216 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 20:02:51] 2024-04-27 18:02:50,217 | INFO     | traces error code: 0
[2024-04-27 20:02:51] 2024-04-27 18:02:50,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 20:02:51] 2024-04-27 18:02:50,278 [wrapper] ==== pilot stdout END ====
[2024-04-27 20:02:51] 2024-04-27 18:02:50,281 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 20:02:51] 2024-04-27 18:02:50,283 [wrapper] pilotpid: 2887942
[2024-04-27 20:02:51] 2024-04-27 18:02:50,285 [wrapper] Pilot exit status: 0
[2024-04-27 20:02:51] 2024-04-27 18:02:50,292 [wrapper] pandaids: 6186287441
[2024-04-27 20:02:51] 2024-04-27 18:02:50,336 [wrapper] cleanup: SIGTERM to supervisor_pilot 3459893 2887943
[2024-04-27 20:02:51] 2024-04-27 18:02:50,338 [wrapper] Test setup, not cleaning
[2024-04-27 20:02:51] 2024-04-27 18:02:50,340 [wrapper] ==== wrapper stdout END ====
[2024-04-27 20:02:51] 2024-04-27 18:02:50,342 [wrapper] ==== wrapper stderr END ====
[2024-04-27 20:02:51] 2024-04-27 18:02:50,346 [wrapper] apfmon messages muted
[2024-04-27 20:02:51]  *** Error codes and diagnostics ***
[2024-04-27 20:02:51]     "exeErrorCode": 0,
[2024-04-27 20:02:51]     "exeErrorDiag": "",
[2024-04-27 20:02:51]     "pilotErrorCode": 0,
[2024-04-27 20:02:51]     "pilotErrorDiag": "",
[2024-04-27 20:02:51]  *** Listing of results directory ***
[2024-04-27 20:02:51] total 828992
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc      6173 Apr 25 12:59 queuedata.json
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc    462745 Apr 25 12:59 pilot3.tar.gz
[2024-04-27 20:02:51] -rwx------ 1 boinc boinc     32211 Apr 25 12:59 runpilot2-wrapper.sh
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc       100 Apr 27 14:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 20:02:51] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 14:56 run_atlas
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc       105 Apr 27 14:56 job.xml
[2024-04-27 20:02:51] -rw-r--r-- 2 boinc boinc 577125707 Apr 27 14:56 EVNT.38221832._000009.pool.root.1
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc      6457 Apr 27 14:56 init_data.xml
[2024-04-27 20:02:51] drwxrwx--x 2 boinc boinc      4096 Apr 27 14:56 shared
[2024-04-27 20:02:51] -rw-r--r-- 2 boinc boinc    474777 Apr 27 14:56 input.tar.gz
[2024-04-27 20:02:51] -rw-r--r-- 2 boinc boinc     17537 Apr 27 14:56 start_atlas.sh
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc         0 Apr 27 14:56 boinc_lockfile
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc      2602 Apr 27 14:56 pandaJob.out
[2024-04-27 20:02:51] -rw------- 1 boinc boinc       424 Apr 27 14:56 setup.sh.local
[2024-04-27 20:02:51] -rw------- 1 boinc boinc    997154 Apr 27 14:56 agis_schedconf.cvmfs.json
[2024-04-27 20:02:51] -rw------- 1 boinc boinc   1315307 Apr 27 14:56 cric_ddmendpoints.json
[2024-04-27 20:02:51] drwx------ 4 boinc boinc      4096 Apr 27 14:56 pilot3
[2024-04-27 20:02:51] -rw------- 1 boinc boinc        95 Apr 27 20:01 pilot_heartbeat.json
[2024-04-27 20:02:51] -rw------- 1 boinc boinc 264086683 Apr 27 20:01 HITS.38221834._000225.pool.root.1
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc       531 Apr 27 20:01 boinc_task_state.xml
[2024-04-27 20:02:51] -rw------- 1 boinc boinc      1050 Apr 27 20:02 memory_monitor_summary.json
[2024-04-27 20:02:51] -rw------- 1 boinc boinc         0 Apr 27 20:02 agis_ddmendpoints.agis.ALL.json
[2024-04-27 20:02:51] -rw------- 1 boinc boinc    377346 Apr 27 20:02 log.38221834._000225.job.log.tgz.1
[2024-04-27 20:02:51] -rw------- 1 boinc boinc      7736 Apr 27 20:02 heartbeat.json
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc      8192 Apr 27 20:02 boinc_mmap_file
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc        28 Apr 27 20:02 wrapper_checkpoint.txt
[2024-04-27 20:02:51] -rw------- 1 boinc boinc      4417 Apr 27 20:02 pilotlog.txt
[2024-04-27 20:02:51] -rw------- 1 boinc boinc   1716642 Apr 27 20:02 log.38221834._000225.job.log.1
[2024-04-27 20:02:51] -rw------- 1 boinc boinc       357 Apr 27 20:02 output.list
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc       620 Apr 27 20:02 runtime_log
[2024-04-27 20:02:51] -rw------- 1 boinc boinc   2109440 Apr 27 20:02 result.tar.gz
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc     11410 Apr 27 20:02 runtime_log.err
[2024-04-27 20:02:51] -rw------- 1 boinc boinc       659 Apr 27 20:02 UtlKDmT0BK5nfZGDcpSWOuwoABFKDmABFKDmtxRSDmySJKDmA9PSUm.diag
[2024-04-27 20:02:51] -rw-r--r-- 1 boinc boinc     20922 Apr 27 20:02 stderr.txt
[2024-04-27 20:02:51] HITS file was successfully produced:
[2024-04-27 20:02:51] -rw------- 1 boinc boinc 264086683 Apr 27 20:01 shared/HITS.pool.root.1
[2024-04-27 20:02:51]  *** Contents of shared directory: ***
[2024-04-27 20:02:51] total 824052
[2024-04-27 20:02:51] -rw-r--r-- 2 boinc boinc 577125707 Apr 27 14:56 ATLAS.root_0
[2024-04-27 20:02:51] -rw-r--r-- 2 boinc boinc    474777 Apr 27 14:56 input.tar.gz
[2024-04-27 20:02:51] -rw-r--r-- 2 boinc boinc     17537 Apr 27 14:56 start_atlas.sh
[2024-04-27 20:02:51] -rw------- 1 boinc boinc 264086683 Apr 27 20:01 HITS.pool.root.1
[2024-04-27 20:02:51] -rw------- 1 boinc boinc   2109440 Apr 27 20:02 result.tar.gz
20:02:52 (2883719): run_atlas exited; CPU time 69482.729935
20:02:52 (2883719): called boinc_finish(0)

</stderr_txt>
]]>

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