Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:46:25 (2153593): wrapper (7.7.26015): starting
10:46:25 (2153593): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 10:46:25] Arguments: --nthreads 4
[2024-04-27 10:46:25] Threads: 4
[2024-04-27 10:46:25] Checking for CVMFS
[2024-04-27 10:46:25] No cvmfs_config command found, will try listing directly
[2024-04-27 10:46:25] CVMFS is ok
[2024-04-27 10:46:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 10:46:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 10:46:25] Further information can be found at the LHC@home message board.
[2024-04-27 10:46:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 10:46:25] Checking for apptainer binary...
[2024-04-27 10:46:25] which: no apptainer in ((null))
[2024-04-27 10:46:25] apptainer is not installed, using version from CVMFS
[2024-04-27 10:46:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 10:46:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-04-27 10:46:26] apptainer works
[2024-04-27 10:46:26] Set ATHENA_PROC_NUMBER=4
[2024-04-27 10:46:26] Set ATHENA_CORE_NUMBER=4
[2024-04-27 10:46:26] Starting ATLAS job with PandaID=6186887568
[2024-04-27 10:46:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 15:24:39]  *** The last 200 lines of the pilot log: ***
[2024-04-27 15:24:39]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 15:24:39]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 15:24:39]  direct_access_lan=False
[2024-04-27 15:24:39]  direct_access_wan=False
[2024-04-27 15:24:39]  domain=
[2024-04-27 15:24:39]  filesize=342059
[2024-04-27 15:24:39]  filetype=log
[2024-04-27 15:24:39]  guid=56facd4b-0ec9-4b47-a2da-11aa5c6b0f9c
[2024-04-27 15:24:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 15:24:39]  is_tar=False
[2024-04-27 15:24:39]  lfn=log.38207259._002011.job.log.tgz.1
[2024-04-27 15:24:39]  mtime=0
[2024-04-27 15:24:39]  protocol_id=None
[2024-04-27 15:24:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 15:24:39]  replicas=None
[2024-04-27 15:24:39]  scope=mc23_13p6TeV
[2024-04-27 15:24:39]  status=None
[2024-04-27 15:24:39]  status_code=0
[2024-04-27 15:24:39]  storage_token=
[2024-04-27 15:24:39]  surl=/scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6186887568/log.38207259._002011.job.log.tgz.1
[2024-04-27 15:24:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/7c/log.38207259._002011.job.log.tgz.1
[2024-04-27 15:24:39]  workdir=None
[2024-04-27 15:24:39] ]
[2024-04-27 15:24:39] 2024-04-27 13:24:15,039 | INFO     | transferring file log.38207259._002011.job.log.tgz.1 from /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6186887568/log.38207259._002011.job.log.tgz.1 to /scratch/b
[2024-04-27 15:24:39] 2024-04-27 13:24:15,040 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6186887568/log.38207259._002011.job.log.tgz.1 /scratch/boinc/var/slot20/slots/0/lo
[2024-04-27 15:24:39] 2024-04-27 13:24:15,060 | INFO     | adding to output.list: log.38207259._002011.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/7c/log.38207259._002011.job.log.tg
[2024-04-27 15:24:39] 2024-04-27 13:24:15,061 | INFO     | summary of transferred files:
[2024-04-27 15:24:39] 2024-04-27 13:24:15,061 | INFO     |  -- lfn=log.38207259._002011.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 15:24:39] 2024-04-27 13:24:15,061 | INFO     | stage-out finished correctly
[2024-04-27 15:24:39] 2024-04-27 13:24:16,944 | WARNING  | process 2164918 is no longer using CPU - aborting
[2024-04-27 15:24:39] 2024-04-27 13:24:16,944 | INFO     | will not send any job update
[2024-04-27 15:24:39] 2024-04-27 13:24:17,243 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 15:24:39] 2024-04-27 13:24:18,633 | INFO     | job 6186887568 has state=finished
[2024-04-27 15:24:39] 2024-04-27 13:24:18,634 | INFO     | preparing for final server update for job 6186887568 in state='finished'
[2024-04-27 15:24:39] 2024-04-27 13:24:18,634 | INFO     | this job has now completed (state=finished)
[2024-04-27 15:24:39] 2024-04-27 13:24:18,634 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 15:24:39] 2024-04-27 13:24:18,635 | INFO     | job 6186887568 has finished - writing final server update
[2024-04-27 15:24:39] 2024-04-27 13:24:18,635 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1509923/.job.ad'
[2024-04-27 15:24:39] 2024-04-27 13:24:18,635 | INFO     | total number of processed events: 400 (read)
[2024-04-27 15:24:39] 2024-04-27 13:24:18,640 | INFO     | executing command: lscpu
[2024-04-27 15:24:39] 2024-04-27 13:24:18,693 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-27 15:24:39] 2024-04-27 13:24:18,694 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 15:24:39] 2024-04-27 13:24:18,735 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 15:24:39] 2024-04-27 13:24:19,448 | INFO     | monitor loop #1280: job 0:6186887568 is in state 'finished'
[2024-04-27 15:24:39] 2024-04-27 13:24:19,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 15:24:39] 2024-04-27 13:24:21,913 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-27 15:24:39] 2024-04-27 13:24:21,914 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6186887568/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 15:24:39] 2024-04-27 13:24:21,914 | INFO     | extracted standard info from prmon json
[2024-04-27 15:24:39] 2024-04-27 13:24:21,914 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 15:24:39] 2024-04-27 13:24:21,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 15:24:39] 2024-04-27 13:24:21,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 15:24:39] 2024-04-27 13:24:21,918 | INFO     | fitting pss+swap vs Time
[2024-04-27 15:24:39] 2024-04-27 13:24:21,920 | INFO     | current chi2=3.710924203949453 (change=0.0026114912285127375 %)
[2024-04-27 15:24:39] 2024-04-27 13:24:21,920 | INFO     | right removable region: 267
[2024-04-27 15:24:39] 2024-04-27 13:24:21,922 | INFO     | current chi2=1.541125911117636 (change=58.47164803017254 %)
[2024-04-27 15:24:39] 2024-04-27 13:24:21,923 | INFO     | current chi2=0.06643438177329151 (change=95.68923075693972 %)
[2024-04-27 15:24:39] 2024-04-27 13:24:21,924 | INFO     | current chi2=0.0008677658843747435 (change=98.69380001557624 %)
[2024-04-27 15:24:39] 2024-04-27 13:24:21,926 | INFO     | current chi2=0.0008228009862079917 (change=5.1816854034484905 %)
[2024-04-27 15:24:39] 2024-04-27 13:24:21,926 | INFO     | left removable region: 40
[2024-04-27 15:24:39] 2024-04-27 13:24:21,927 | INFO     | current memory leak: 0.95 B/s (using 227 data points, chi2=0.00)
[2024-04-27 15:24:39] 2024-04-27 13:24:21,927 | INFO     | ..............................
[2024-04-27 15:24:39] 2024-04-27 13:24:21,927 | INFO     | . Timing measurements:
[2024-04-27 15:24:39] 2024-04-27 13:24:21,927 | INFO     | . get job = 0 s
[2024-04-27 15:24:39] 2024-04-27 13:24:21,927 | INFO     | . initial setup = 1 s
[2024-04-27 15:24:39] 2024-04-27 13:24:21,927 | INFO     | . payload setup = 4 s
[2024-04-27 15:24:39] 2024-04-27 13:24:21,927 | INFO     | . stage-in = 0 s
[2024-04-27 15:24:39] 2024-04-27 13:24:21,927 | INFO     | . payload execution = 16637 s
[2024-04-27 15:24:39] 2024-04-27 13:24:21,927 | INFO     | . stage-out = 0 s
[2024-04-27 15:24:39] 2024-04-27 13:24:21,927 | INFO     | . log creation = 0 s
[2024-04-27 15:24:39] 2024-04-27 13:24:21,927 | INFO     | ..............................
[2024-04-27 15:24:39] 2024-04-27 13:24:21,999 | INFO     | 
[2024-04-27 15:24:39] 2024-04-27 13:24:21,999 | INFO     | job summary report
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | --------------------------------------------------
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | PanDA job id: 6186887568
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | task id: 38207259
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | errors: (none)
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | pilot state: finished 
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | transexitcode: 0
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | exeerrorcode: 0
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | exeerrordiag: 
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | exitcode: 0
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | exitmsg: OK
[2024-04-27 15:24:39] 2024-04-27 13:24:22,000 | INFO     | cpuconsumptiontime: 63819 s
[2024-04-27 15:24:39] 2024-04-27 13:24:22,001 | INFO     | nevents: 400
[2024-04-27 15:24:39] 2024-04-27 13:24:22,001 | INFO     | neventsw: 0
[2024-04-27 15:24:39] 2024-04-27 13:24:22,001 | INFO     | pid: 2164918
[2024-04-27 15:24:39] 2024-04-27 13:24:22,001 | INFO     | pgrp: 2164918
[2024-04-27 15:24:39] 2024-04-27 13:24:22,001 | INFO     | corecount: 4
[2024-04-27 15:24:39] 2024-04-27 13:24:22,001 | INFO     | event service: False
[2024-04-27 15:24:39] 2024-04-27 13:24:22,001 | INFO     | sizes: {0: 2375714, 1: 2375714, 4: 2375948, 11: 2375976, 16646: 2407771, 16647: 2416753, 16649: 2416937, 16654: 2417107}
[2024-04-27 15:24:39] 2024-04-27 13:24:22,001 | INFO     | --------------------------------------------------
[2024-04-27 15:24:39] 2024-04-27 13:24:22,001 | INFO     | 
[2024-04-27 15:24:39] 2024-04-27 13:24:22,001 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-04-27 15:24:39] 2024-04-27 13:24:22,029 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,029 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,030 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,031 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,031 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,031 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 15:24:39] 2024-04-27 13:24:22,031 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,031 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 15:24:39] 2024-04-27 13:24:22,031 | INFO     | job 6186887568 has completed (purged errors)
[2024-04-27 15:24:39] 2024-04-27 13:24:22,031 | INFO     | overall cleanup function is called
[2024-04-27 15:24:39] 2024-04-27 13:24:23,039 | INFO     | --- collectZombieJob: --- 10, [2164918]
[2024-04-27 15:24:39] 2024-04-27 13:24:23,039 | INFO     | zombie collector waiting for pid 2164918
[2024-04-27 15:24:39] 2024-04-27 13:24:23,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 15:24:39] 2024-04-27 13:24:24,044 | INFO     | collected zombie processes
[2024-04-27 15:24:39] 2024-04-27 13:24:24,044 | INFO     | will now attempt to kill all subprocesses of pid=2164918
[2024-04-27 15:24:39] 2024-04-27 13:24:24,210 | INFO     | process IDs to be killed: [2164918] (in reverse order)
[2024-04-27 15:24:39] 2024-04-27 13:24:24,313 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 15:24:39] 2024-04-27 13:24:24,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 15:24:39] 2024-04-27 13:24:24,320 | INFO     | did not find any defunct processes belonging to 2164918
[2024-04-27 15:24:39] 2024-04-27 13:24:24,326 | INFO     | did not find any defunct processes belonging to 2164918
[2024-04-27 15:24:39] 2024-04-27 13:24:24,326 | INFO     | ready for new job
[2024-04-27 15:24:39] 2024-04-27 13:24:24,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 15:24:39] 2024-04-27 13:24:24,328 | INFO     | *************************************
[2024-04-27 15:24:39] 2024-04-27 13:24:24,328 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 15:24:39] 2024-04-27 13:24:24,328 | INFO     | *************************************
[2024-04-27 15:24:39] 2024-04-27 13:24:24,328 | INFO     | 
[2024-04-27 15:24:39] 2024-04-27 13:24:24,331 | INFO     | architecture information:
[2024-04-27 15:24:39] 2024-04-27 13:24:24,331 | INFO     | executing command: cat /etc/os-release
[2024-04-27 15:24:39] 2024-04-27 13:24:24,347 | INFO     | cat /etc/os-release:
[2024-04-27 15:24:39] NAME="CentOS Linux"
[2024-04-27 15:24:39] VERSION="7 (Core)"
[2024-04-27 15:24:39] ID="centos"
[2024-04-27 15:24:39] ID_LIKE="rhel fedora"
[2024-04-27 15:24:39] VERSION_ID="7"
[2024-04-27 15:24:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 15:24:39] ANSI_COLOR="0;31"
[2024-04-27 15:24:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 15:24:39] HOME_URL="https://www.centos.org/"
[2024-04-27 15:24:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 15:24:39] 
[2024-04-27 15:24:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 15:24:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 15:24:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 15:24:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 15:24:39] 
[2024-04-27 15:24:39] 2024-04-27 13:24:24,347 | INFO     | *************************************
[2024-04-27 15:24:39] 2024-04-27 13:24:24,849 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-04-27 15:24:39] 2024-04-27 13:24:24,867 | INFO     | sufficient remaining disk space (615879016448 B)
[2024-04-27 15:24:39] 2024-04-27 13:24:24,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 15:24:39] 2024-04-27 13:24:24,867 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 15:24:39] 2024-04-27 13:24:24,986 | INFO     | all data control threads have been joined
[2024-04-27 15:24:39] 2024-04-27 13:24:25,461 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 15:24:39] 2024-04-27 13:24:25,461 | INFO     | aborting loop
[2024-04-27 15:24:39] 2024-04-27 13:24:25,615 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 15:24:39] 2024-04-27 13:24:25,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 15:24:39] 2024-04-27 13:24:25,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 15:24:39] 2024-04-27 13:24:25,626 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 15:24:39] 2024-04-27 13:24:25,789 | INFO     | all job control threads have been joined
[2024-04-27 15:24:39] 2024-04-27 13:24:25,872 | INFO     | [job] retrieve thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:25,886 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:25,991 | INFO     | [data] control thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:26,333 | INFO     | all payload control threads have been joined
[2024-04-27 15:24:39] 2024-04-27 13:24:26,354 | INFO     | [payload] validate_post thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:26,467 | INFO     | [job] job monitor thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:26,546 | INFO     | [data] copytool_in thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:26,794 | INFO     | [job] control thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:27,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 15:24:39] 2024-04-27 13:24:27,093 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:27,151 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:27,185 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:27,202 | INFO     | [job] validate thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:27,339 | INFO     | [payload] control thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:27,407 | INFO     | [payload] failed_post thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:27,631 | INFO     | [data] copytool_out thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:27,810 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 15:24:39] 2024-04-27 13:24:28,014 | INFO     | [job] queue monitor thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:31,815 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 15:24:39] 2024-04-27 13:24:33,396 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 46926613550144)>', '<ExcThread(monitor, started 46926784784128)>']
[2024-04-27 15:24:39] 2024-04-27 13:24:33,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 15:24:39] 2024-04-27 13:24:33,649 | INFO     | [monitor] control thread has ended
[2024-04-27 15:24:39] 2024-04-27 13:24:38,422 | INFO     | all workflow threads have been joined
[2024-04-27 15:24:39] 2024-04-27 13:24:38,422 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 15:24:39] 2024-04-27 13:24:38,422 | INFO     | traces error code: 0
[2024-04-27 15:24:39] 2024-04-27 13:24:38,422 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 15:24:39] 2024-04-27 13:24:38,504 [wrapper] ==== pilot stdout END ====
[2024-04-27 15:24:39] 2024-04-27 13:24:38,507 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 15:24:39] 2024-04-27 13:24:38,509 [wrapper] pilotpid: 2157908
[2024-04-27 15:24:39] 2024-04-27 13:24:38,511 [wrapper] Pilot exit status: 0
[2024-04-27 15:24:39] 2024-04-27 13:24:38,517 [wrapper] pandaids: 6186887568
[2024-04-27 15:24:39] 2024-04-27 13:24:38,581 [wrapper] cleanup: SIGTERM to supervisor_pilot 3050909 2157909
[2024-04-27 15:24:39] 2024-04-27 13:24:38,584 [wrapper] Test setup, not cleaning
[2024-04-27 15:24:39] 2024-04-27 13:24:38,586 [wrapper] ==== wrapper stdout END ====
[2024-04-27 15:24:39] 2024-04-27 13:24:38,588 [wrapper] ==== wrapper stderr END ====
[2024-04-27 15:24:39] 2024-04-27 13:24:38,593 [wrapper] apfmon messages muted
[2024-04-27 15:24:39]  *** Error codes and diagnostics ***
[2024-04-27 15:24:39]     "exeErrorCode": 0,
[2024-04-27 15:24:39]     "exeErrorDiag": "",
[2024-04-27 15:24:39]     "pilotErrorCode": 0,
[2024-04-27 15:24:39]     "pilotErrorDiag": "",
[2024-04-27 15:24:39]  *** Listing of results directory ***
[2024-04-27 15:24:39] total 894436
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc    462745 Apr 25 22:24 pilot3.tar.gz
[2024-04-27 15:24:39] -rwx------ 1 boinc boinc     32211 Apr 25 22:44 runpilot2-wrapper.sh
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc      6173 Apr 25 22:44 queuedata.json
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc       100 Apr 27 10:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 15:24:39] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 10:46 run_atlas
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc       105 Apr 27 10:46 job.xml
[2024-04-27 15:24:39] -rw-r--r-- 2 boinc boinc 623512950 Apr 27 10:46 EVNT.38207257._000071.pool.root.1
[2024-04-27 15:24:39] -rw-r--r-- 2 boinc boinc     17537 Apr 27 10:46 start_atlas.sh
[2024-04-27 15:24:39] drwxrwx--x 2 boinc boinc      4096 Apr 27 10:46 shared
[2024-04-27 15:24:39] -rw-r--r-- 2 boinc boinc    474791 Apr 27 10:46 input.tar.gz
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc      6663 Apr 27 10:46 init_data.xml
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc         0 Apr 27 10:46 boinc_lockfile
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc      2660 Apr 27 10:46 pandaJob.out
[2024-04-27 15:24:39] -rw------- 1 boinc boinc       424 Apr 27 10:46 setup.sh.local
[2024-04-27 15:24:39] -rw------- 1 boinc boinc    997441 Apr 27 10:46 agis_schedconf.cvmfs.json
[2024-04-27 15:24:39] -rw------- 1 boinc boinc   1315307 Apr 27 10:46 cric_ddmendpoints.json
[2024-04-27 15:24:39] drwx------ 4 boinc boinc      4096 Apr 27 10:46 pilot3
[2024-04-27 15:24:39] -rw------- 1 boinc boinc 285090779 Apr 27 15:23 HITS.38207259._002011.pool.root.1
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc       531 Apr 27 15:23 boinc_task_state.xml
[2024-04-27 15:24:39] -rw------- 1 boinc boinc      1049 Apr 27 15:24 memory_monitor_summary.json
[2024-04-27 15:24:39] -rw------- 1 boinc boinc         0 Apr 27 15:24 agis_ddmendpoints.agis.ALL.json
[2024-04-27 15:24:39] -rw------- 1 boinc boinc    342059 Apr 27 15:24 log.38207259._002011.job.log.tgz.1
[2024-04-27 15:24:39] -rw------- 1 boinc boinc        95 Apr 27 15:24 pilot_heartbeat.json
[2024-04-27 15:24:39] -rw------- 1 boinc boinc      7749 Apr 27 15:24 heartbeat.json
[2024-04-27 15:24:39] -rw------- 1 boinc boinc      4221 Apr 27 15:24 pilotlog.txt
[2024-04-27 15:24:39] -rw------- 1 boinc boinc   1562751 Apr 27 15:24 log.38207259._002011.job.log.1
[2024-04-27 15:24:39] -rw------- 1 boinc boinc       357 Apr 27 15:24 output.list
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc       620 Apr 27 15:24 runtime_log
[2024-04-27 15:24:39] -rw------- 1 boinc boinc   1925120 Apr 27 15:24 result.tar.gz
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc     11410 Apr 27 15:24 runtime_log.err
[2024-04-27 15:24:39] -rw------- 1 boinc boinc       657 Apr 27 15:24 1SFKDmw7KK5n9Rq4apoT9bVoABFKDmABFKDmtztZDmwyOKDmePzHln.diag
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc        28 Apr 27 15:24 wrapper_checkpoint.txt
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc      8192 Apr 27 15:24 boinc_mmap_file
[2024-04-27 15:24:39] -rw-r--r-- 1 boinc boinc     20887 Apr 27 15:24 stderr.txt
[2024-04-27 15:24:39] HITS file was successfully produced:
[2024-04-27 15:24:39] -rw------- 1 boinc boinc 285090779 Apr 27 15:23 shared/HITS.pool.root.1
[2024-04-27 15:24:39]  *** Contents of shared directory: ***
[2024-04-27 15:24:39] total 889684
[2024-04-27 15:24:39] -rw-r--r-- 2 boinc boinc 623512950 Apr 27 10:46 ATLAS.root_0
[2024-04-27 15:24:39] -rw-r--r-- 2 boinc boinc     17537 Apr 27 10:46 start_atlas.sh
[2024-04-27 15:24:39] -rw-r--r-- 2 boinc boinc    474791 Apr 27 10:46 input.tar.gz
[2024-04-27 15:24:39] -rw------- 1 boinc boinc 285090779 Apr 27 15:23 HITS.pool.root.1
[2024-04-27 15:24:39] -rw------- 1 boinc boinc   1925120 Apr 27 15:24 result.tar.gz
15:24:40 (2153593): run_atlas exited; CPU time 63451.180310
15:24:40 (2153593): called boinc_finish(0)

</stderr_txt>
]]>

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