Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:19:00 (3994464): wrapper (7.7.26015): starting
20:19:00 (3994464): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 20:19:00] Arguments: --nthreads 4
[2024-04-27 20:19:00] Threads: 4
[2024-04-27 20:19:00] Checking for CVMFS
[2024-04-27 20:19:00] No cvmfs_config command found, will try listing directly
[2024-04-27 20:19:00] CVMFS is ok
[2024-04-27 20:19:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 20:19:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 20:19:00] Further information can be found at the LHC@home message board.
[2024-04-27 20:19:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 20:19:00] Checking for apptainer binary...
[2024-04-27 20:19:00] which: no apptainer in ((null))
[2024-04-27 20:19:00] apptainer is not installed, using version from CVMFS
[2024-04-27 20:19:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 20:19:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-04-27 20:19:01] apptainer works
[2024-04-27 20:19:01] Set ATHENA_PROC_NUMBER=4
[2024-04-27 20:19:01] Set ATHENA_CORE_NUMBER=4
[2024-04-27 20:19:01] Starting ATLAS job with PandaID=6186575879
[2024-04-27 20:19:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 23:01:34]  *** The last 200 lines of the pilot log: ***
[2024-04-27 23:01:35]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 23:01:35]  direct_access_lan=False
[2024-04-27 23:01:35]  direct_access_wan=False
[2024-04-27 23:01:35]  domain=
[2024-04-27 23:01:35]  filesize=291412
[2024-04-27 23:01:35]  filetype=log
[2024-04-27 23:01:35]  guid=58e5dcc7-900a-4c53-a4a1-d6222d0bb14c
[2024-04-27 23:01:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 23:01:35]  is_tar=False
[2024-04-27 23:01:35]  lfn=log.38207159._002708.job.log.tgz.1
[2024-04-27 23:01:35]  mtime=0
[2024-04-27 23:01:35]  protocol_id=None
[2024-04-27 23:01:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 23:01:35]  replicas=None
[2024-04-27 23:01:35]  scope=mc23_13p6TeV
[2024-04-27 23:01:35]  status=None
[2024-04-27 23:01:35]  status_code=0
[2024-04-27 23:01:35]  storage_token=
[2024-04-27 23:01:35]  surl=/scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6186575879/log.38207159._002708.job.log.tgz.1
[2024-04-27 23:01:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/a6/log.38207159._002708.job.log.tgz.1
[2024-04-27 23:01:35]  workdir=None
[2024-04-27 23:01:35] ]
[2024-04-27 23:01:35] 2024-04-27 21:01:12,803 | INFO     | transferring file log.38207159._002708.job.log.tgz.1 from /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6186575879/log.38207159._002708.job.log.tgz.1 to /scratch/b
[2024-04-27 23:01:35] 2024-04-27 21:01:12,804 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6186575879/log.38207159._002708.job.log.tgz.1 /scratch/boinc/var/slot84/slots/0/lo
[2024-04-27 23:01:35] 2024-04-27 21:01:12,827 | INFO     | adding to output.list: log.38207159._002708.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fd/a6/log.38207159._002708.job.log.tg
[2024-04-27 23:01:35] 2024-04-27 21:01:12,828 | INFO     | summary of transferred files:
[2024-04-27 23:01:35] 2024-04-27 21:01:12,828 | INFO     |  -- lfn=log.38207159._002708.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 23:01:35] 2024-04-27 21:01:12,828 | INFO     | stage-out finished correctly
[2024-04-27 23:01:35] 2024-04-27 21:01:12,902 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 23:01:35] 2024-04-27 21:01:13,009 | INFO     | job 6186575879 has state=finished
[2024-04-27 23:01:35] 2024-04-27 21:01:13,009 | INFO     | preparing for final server update for job 6186575879 in state='finished'
[2024-04-27 23:01:35] 2024-04-27 21:01:13,010 | INFO     | this job has now completed (state=finished)
[2024-04-27 23:01:35] 2024-04-27 21:01:13,010 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 23:01:35] 2024-04-27 21:01:13,010 | INFO     | job 6186575879 has finished - writing final server update
[2024-04-27 23:01:35] 2024-04-27 21:01:13,010 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_723462/.job.ad'
[2024-04-27 23:01:35] 2024-04-27 21:01:13,010 | INFO     | total number of processed events: 400 (read)
[2024-04-27 23:01:35] 2024-04-27 21:01:13,018 | INFO     | executing command: lscpu
[2024-04-27 23:01:35] 2024-04-27 21:01:13,114 | WARNING  | process 4006714 is no longer using CPU - aborting
[2024-04-27 23:01:35] 2024-04-27 21:01:13,115 | INFO     | will not send any job update
[2024-04-27 23:01:35] 2024-04-27 21:01:13,177 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-27 23:01:35] 2024-04-27 21:01:13,178 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 23:01:35] 2024-04-27 21:01:13,215 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 23:01:35] 2024-04-27 21:01:15,617 | INFO     | monitor loop #734: job 0:6186575879 is in state 'finished'
[2024-04-27 23:01:35] 2024-04-27 21:01:15,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 23:01:35] 2024-04-27 21:01:17,942 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 23:01:35] 2024-04-27 21:01:17,942 | INFO     | using path: /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6186575879/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 23:01:35] 2024-04-27 21:01:17,944 | INFO     | extracted standard info from prmon json
[2024-04-27 23:01:35] 2024-04-27 21:01:17,944 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 23:01:35] 2024-04-27 21:01:17,944 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 23:01:35] 2024-04-27 21:01:17,944 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 23:01:35] 2024-04-27 21:01:17,947 | INFO     | fitting pss+swap vs Time
[2024-04-27 23:01:35] 2024-04-27 21:01:17,950 | INFO     | current chi2=3.882833042914924 (change=-0.038855595525236666 %)
[2024-04-27 23:01:35] 2024-04-27 21:01:17,950 | INFO     | right removable region: 153
[2024-04-27 23:01:35] 2024-04-27 21:01:17,951 | INFO     | current chi2=1.4866480287014299 (change=61.69740861353507 %)
[2024-04-27 23:01:35] 2024-04-27 21:01:17,952 | INFO     | current chi2=0.06605567052173054 (change=95.55673775860521 %)
[2024-04-27 23:01:35] 2024-04-27 21:01:17,953 | INFO     | current chi2=0.019080817306677166 (change=71.11403584889796 %)
[2024-04-27 23:01:35] 2024-04-27 21:01:17,954 | INFO     | current chi2=0.01899963141449958 (change=0.4254843535930506 %)
[2024-04-27 23:01:35] 2024-04-27 21:01:17,954 | INFO     | left removable region: 40
[2024-04-27 23:01:35] 2024-04-27 21:01:17,955 | INFO     | current memory leak: -4.61 B/s (using 113 data points, chi2=0.01)
[2024-04-27 23:01:35] 2024-04-27 21:01:17,955 | INFO     | ..............................
[2024-04-27 23:01:35] 2024-04-27 21:01:17,955 | INFO     | . Timing measurements:
[2024-04-27 23:01:35] 2024-04-27 21:01:17,955 | INFO     | . get job = 0 s
[2024-04-27 23:01:35] 2024-04-27 21:01:17,955 | INFO     | . initial setup = 1 s
[2024-04-27 23:01:35] 2024-04-27 21:01:17,955 | INFO     | . payload setup = 5 s
[2024-04-27 23:01:35] 2024-04-27 21:01:17,955 | INFO     | . stage-in = 0 s
[2024-04-27 23:01:35] 2024-04-27 21:01:17,955 | INFO     | . payload execution = 9696 s
[2024-04-27 23:01:35] 2024-04-27 21:01:17,955 | INFO     | . stage-out = 0 s
[2024-04-27 23:01:35] 2024-04-27 21:01:17,955 | INFO     | . log creation = 0 s
[2024-04-27 23:01:35] 2024-04-27 21:01:17,955 | INFO     | ..............................
[2024-04-27 23:01:35] 2024-04-27 21:01:18,019 | INFO     | 
[2024-04-27 23:01:35] 2024-04-27 21:01:18,020 | INFO     | job summary report
[2024-04-27 23:01:35] 2024-04-27 21:01:18,020 | INFO     | --------------------------------------------------
[2024-04-27 23:01:35] 2024-04-27 21:01:18,020 | INFO     | PanDA job id: 6186575879
[2024-04-27 23:01:35] 2024-04-27 21:01:18,020 | INFO     | task id: 38207159
[2024-04-27 23:01:35] 2024-04-27 21:01:18,020 | INFO     | errors: (none)
[2024-04-27 23:01:35] 2024-04-27 21:01:18,020 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 23:01:35] 2024-04-27 21:01:18,020 | INFO     | pilot state: finished 
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | transexitcode: 0
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | exeerrorcode: 0
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | exeerrordiag: 
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | exitcode: 0
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | exitmsg: OK
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | cpuconsumptiontime: 35931 s
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | nevents: 400
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | neventsw: 0
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | pid: 4006714
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | pgrp: 4006714
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | corecount: 4
[2024-04-27 23:01:35] 2024-04-27 21:01:18,021 | INFO     | event service: False
[2024-04-27 23:01:35] 2024-04-27 21:01:18,022 | INFO     | sizes: {0: 2375717, 5: 2375923, 11: 2375979, 9706: 2404380, 9707: 2413418, 9712: 2413532}
[2024-04-27 23:01:35] 2024-04-27 21:01:18,022 | INFO     | --------------------------------------------------
[2024-04-27 23:01:35] 2024-04-27 21:01:18,022 | INFO     | 
[2024-04-27 23:01:35] 2024-04-27 21:01:18,022 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2024-04-27 23:01:35] 2024-04-27 21:01:18,044 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,044 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,044 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,044 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,044 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,044 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,045 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,045 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,045 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,045 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,045 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,045 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,045 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,045 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,045 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 23:01:35] 2024-04-27 21:01:18,045 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,045 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 23:01:35] 2024-04-27 21:01:18,046 | INFO     | job 6186575879 has completed (purged errors)
[2024-04-27 23:01:35] 2024-04-27 21:01:18,046 | INFO     | overall cleanup function is called
[2024-04-27 23:01:35] 2024-04-27 21:01:19,053 | INFO     | --- collectZombieJob: --- 10, [4006714]
[2024-04-27 23:01:35] 2024-04-27 21:01:19,054 | INFO     | zombie collector waiting for pid 4006714
[2024-04-27 23:01:35] 2024-04-27 21:01:19,054 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 23:01:35] 2024-04-27 21:01:20,058 | INFO     | collected zombie processes
[2024-04-27 23:01:35] 2024-04-27 21:01:20,059 | INFO     | will now attempt to kill all subprocesses of pid=4006714
[2024-04-27 23:01:35] 2024-04-27 21:01:20,293 | INFO     | process IDs to be killed: [4006714] (in reverse order)
[2024-04-27 23:01:35] 2024-04-27 21:01:20,453 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 23:01:35] 2024-04-27 21:01:20,454 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 23:01:35] 2024-04-27 21:01:20,472 | INFO     | did not find any defunct processes belonging to 4006714
[2024-04-27 23:01:35] 2024-04-27 21:01:20,490 | INFO     | did not find any defunct processes belonging to 4006714
[2024-04-27 23:01:35] 2024-04-27 21:01:20,490 | INFO     | ready for new job
[2024-04-27 23:01:35] 2024-04-27 21:01:20,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 23:01:35] 2024-04-27 21:01:20,492 | INFO     | *************************************
[2024-04-27 23:01:35] 2024-04-27 21:01:20,492 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 23:01:35] 2024-04-27 21:01:20,492 | INFO     | *************************************
[2024-04-27 23:01:35] 2024-04-27 21:01:20,492 | INFO     | 
[2024-04-27 23:01:35] 2024-04-27 21:01:20,499 | INFO     | architecture information:
[2024-04-27 23:01:35] 2024-04-27 21:01:20,499 | INFO     | executing command: cat /etc/os-release
[2024-04-27 23:01:35] 2024-04-27 21:01:20,515 | INFO     | cat /etc/os-release:
[2024-04-27 23:01:35] NAME="CentOS Linux"
[2024-04-27 23:01:35] VERSION="7 (Core)"
[2024-04-27 23:01:35] ID="centos"
[2024-04-27 23:01:35] ID_LIKE="rhel fedora"
[2024-04-27 23:01:35] VERSION_ID="7"
[2024-04-27 23:01:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 23:01:35] ANSI_COLOR="0;31"
[2024-04-27 23:01:35] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 23:01:35] HOME_URL="https://www.centos.org/"
[2024-04-27 23:01:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 23:01:35] 
[2024-04-27 23:01:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 23:01:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 23:01:35] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 23:01:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 23:01:35] 
[2024-04-27 23:01:35] 2024-04-27 21:01:20,515 | INFO     | *************************************
[2024-04-27 23:01:35] 2024-04-27 21:01:21,018 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2024-04-27 23:01:35] 2024-04-27 21:01:21,036 | INFO     | sufficient remaining disk space (3026894979072 B)
[2024-04-27 23:01:35] 2024-04-27 21:01:21,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 23:01:35] 2024-04-27 21:01:21,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 23:01:35] 2024-04-27 21:01:21,037 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 23:01:35] 2024-04-27 21:01:21,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 23:01:35] 2024-04-27 21:01:21,038 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 23:01:35] 2024-04-27 21:01:21,038 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 23:01:35] 2024-04-27 21:01:21,039 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 23:01:35] 2024-04-27 21:01:21,495 | INFO     | all data control threads have been joined
[2024-04-27 23:01:35] 2024-04-27 21:01:21,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 23:01:35] 2024-04-27 21:01:21,636 | INFO     | aborting loop
[2024-04-27 23:01:35] 2024-04-27 21:01:21,703 | INFO     | all job control threads have been joined
[2024-04-27 23:01:35] 2024-04-27 21:01:22,042 | INFO     | [job] retrieve thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:22,079 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:22,082 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:22,147 | INFO     | all payload control threads have been joined
[2024-04-27 23:01:35] 2024-04-27 21:01:22,205 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:22,293 | INFO     | [job] validate thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:22,418 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:22,500 | INFO     | [data] control thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:22,640 | INFO     | [job] job monitor thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:22,708 | INFO     | [job] control thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:22,782 | INFO     | [payload] validate_post thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:23,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 23:01:35] 2024-04-27 21:01:23,036 | INFO     | [data] copytool_in thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:23,043 | INFO     | [data] copytool_out thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:23,128 | INFO     | [payload] failed_post thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:23,153 | INFO     | [payload] control thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:23,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 23:01:35] 2024-04-27 21:01:24,034 | INFO     | [job] queue monitor thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:27,524 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 23:01:35] 2024-04-27 21:01:28,983 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47384167105600)>', '<ExcThread(monitor, started 47384340440832)>']
[2024-04-27 23:01:35] 2024-04-27 21:01:29,078 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 23:01:35] 2024-04-27 21:01:29,079 | INFO     | [monitor] control thread has ended
[2024-04-27 23:01:35] 2024-04-27 21:01:34,009 | INFO     | all workflow threads have been joined
[2024-04-27 23:01:35] 2024-04-27 21:01:34,009 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 23:01:35] 2024-04-27 21:01:34,009 | INFO     | traces error code: 0
[2024-04-27 23:01:35] 2024-04-27 21:01:34,010 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 23:01:35] 2024-04-27 21:01:34,109 [wrapper] ==== pilot stdout END ====
[2024-04-27 23:01:35] 2024-04-27 21:01:34,112 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 23:01:35] 2024-04-27 21:01:34,115 [wrapper] pilotpid: 3999132
[2024-04-27 23:01:35] 2024-04-27 21:01:34,117 [wrapper] Pilot exit status: 0
[2024-04-27 23:01:35] 2024-04-27 21:01:34,132 [wrapper] pandaids: 6186575879
[2024-04-27 23:01:35] 2024-04-27 21:01:34,230 [wrapper] cleanup: SIGTERM to supervisor_pilot  723872 3999133
[2024-04-27 23:01:35] 2024-04-27 21:01:34,233 [wrapper] Test setup, not cleaning
[2024-04-27 23:01:35] 2024-04-27 21:01:34,235 [wrapper] ==== wrapper stdout END ====
[2024-04-27 23:01:35] 2024-04-27 21:01:34,240 [wrapper] ==== wrapper stderr END ====
[2024-04-27 23:01:35] 2024-04-27 21:01:34,245 [wrapper] apfmon messages muted
[2024-04-27 23:01:35]  *** Error codes and diagnostics ***
[2024-04-27 23:01:35]     "exeErrorCode": 0,
[2024-04-27 23:01:35]     "exeErrorDiag": "",
[2024-04-27 23:01:35]     "pilotErrorCode": 0,
[2024-04-27 23:01:35]     "pilotErrorDiag": "",
[2024-04-27 23:01:35]  *** Listing of results directory ***
[2024-04-27 23:01:35] total 707760
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc    462745 Apr 25 17:49 pilot3.tar.gz
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc      6173 Apr 25 17:58 queuedata.json
[2024-04-27 23:01:35] -rwx------ 1 boinc boinc     32211 Apr 25 17:58 runpilot2-wrapper.sh
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc       100 Apr 27 20:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 23:01:35] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 20:18 run_atlas
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc       105 Apr 27 20:18 job.xml
[2024-04-27 23:01:35] -rw-r--r-- 2 boinc boinc     17537 Apr 27 20:19 start_atlas.sh
[2024-04-27 23:01:35] drwxrwx--x 2 boinc boinc      4096 Apr 27 20:19 shared
[2024-04-27 23:01:35] -rw-r--r-- 2 boinc boinc    474806 Apr 27 20:19 input.tar.gz
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc      6643 Apr 27 20:19 init_data.xml
[2024-04-27 23:01:35] -rw-r--r-- 2 boinc boinc 519432230 Apr 27 20:19 EVNT.38207157._000104.pool.root.1
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc         0 Apr 27 20:19 boinc_lockfile
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc      2650 Apr 27 20:19 pandaJob.out
[2024-04-27 23:01:35] -rw------- 1 boinc boinc       424 Apr 27 20:19 setup.sh.local
[2024-04-27 23:01:35] -rw------- 1 boinc boinc    997146 Apr 27 20:19 agis_schedconf.cvmfs.json
[2024-04-27 23:01:35] -rw------- 1 boinc boinc         0 Apr 27 20:19 agis_ddmendpoints.agis.ALL.json
[2024-04-27 23:01:35] -rw------- 1 boinc boinc   1315307 Apr 27 20:19 cric_ddmendpoints.json
[2024-04-27 23:01:35] drwx------ 4 boinc boinc      4096 Apr 27 20:19 pilot3
[2024-04-27 23:01:35] -rw------- 1 boinc boinc        95 Apr 27 23:00 pilot_heartbeat.json
[2024-04-27 23:01:35] -rw------- 1 boinc boinc 199407753 Apr 27 23:00 HITS.38207159._002708.pool.root.1
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc       531 Apr 27 23:00 boinc_task_state.xml
[2024-04-27 23:01:35] -rw------- 1 boinc boinc      1039 Apr 27 23:01 memory_monitor_summary.json
[2024-04-27 23:01:35] -rw------- 1 boinc boinc    291412 Apr 27 23:01 log.38207159._002708.job.log.tgz.1
[2024-04-27 23:01:35] -rw------- 1 boinc boinc      7690 Apr 27 23:01 heartbeat.json
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc        27 Apr 27 23:01 wrapper_checkpoint.txt
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc      8192 Apr 27 23:01 boinc_mmap_file
[2024-04-27 23:01:35] -rw------- 1 boinc boinc      4345 Apr 27 23:01 pilotlog.txt
[2024-04-27 23:01:35] -rw------- 1 boinc boinc    917071 Apr 27 23:01 log.38207159._002708.job.log.1
[2024-04-27 23:01:35] -rw------- 1 boinc boinc       357 Apr 27 23:01 output.list
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc       620 Apr 27 23:01 runtime_log
[2024-04-27 23:01:35] -rw------- 1 boinc boinc   1228800 Apr 27 23:01 result.tar.gz
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc     11409 Apr 27 23:01 runtime_log.err
[2024-04-27 23:01:35] -rw------- 1 boinc boinc       655 Apr 27 23:01 douNDmvfGK5np2BDcpmwOghnABFKDmABFKDmJjxZDm69HKDmMoiixn.diag
[2024-04-27 23:01:35] -rw-r--r-- 1 boinc boinc     20935 Apr 27 23:01 stderr.txt
[2024-04-27 23:01:35] HITS file was successfully produced:
[2024-04-27 23:01:35] -rw------- 1 boinc boinc 199407753 Apr 27 23:00 shared/HITS.pool.root.1
[2024-04-27 23:01:35]  *** Contents of shared directory: ***
[2024-04-27 23:01:35] total 703688
[2024-04-27 23:01:35] -rw-r--r-- 2 boinc boinc     17537 Apr 27 20:19 start_atlas.sh
[2024-04-27 23:01:35] -rw-r--r-- 2 boinc boinc    474806 Apr 27 20:19 input.tar.gz
[2024-04-27 23:01:35] -rw-r--r-- 2 boinc boinc 519432230 Apr 27 20:19 ATLAS.root_0
[2024-04-27 23:01:35] -rw------- 1 boinc boinc 199407753 Apr 27 23:00 HITS.pool.root.1
[2024-04-27 23:01:35] -rw------- 1 boinc boinc   1228800 Apr 27 23:01 result.tar.gz
23:01:36 (3994464): run_atlas exited; CPU time 35685.393683
23:01:36 (3994464): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN