Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:01:27 (1669368): wrapper (7.7.26015): starting
08:01:27 (1669368): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 08:01:27] Arguments: --nthreads 4
[2024-04-27 08:01:27] Threads: 4
[2024-04-27 08:01:27] Checking for CVMFS
[2024-04-27 08:01:27] No cvmfs_config command found, will try listing directly
[2024-04-27 08:01:27] CVMFS is ok
[2024-04-27 08:01:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 08:01:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 08:01:27] Further information can be found at the LHC@home message board.
[2024-04-27 08:01:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 08:01:27] Checking for apptainer binary...
[2024-04-27 08:01:27] which: no apptainer in ((null))
[2024-04-27 08:01:27] apptainer is not installed, using version from CVMFS
[2024-04-27 08:01:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 08:01:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-04-27 08:01:28] apptainer works
[2024-04-27 08:01:28] Set ATHENA_PROC_NUMBER=4
[2024-04-27 08:01:28] Set ATHENA_CORE_NUMBER=4
[2024-04-27 08:01:28] Starting ATLAS job with PandaID=6186575885
[2024-04-27 08:01:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 10:46:13]  *** The last 200 lines of the pilot log: ***
[2024-04-27 10:46:13]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 10:46:13]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 10:46:13]  direct_access_lan=False
[2024-04-27 10:46:13]  direct_access_wan=False
[2024-04-27 10:46:13]  domain=
[2024-04-27 10:46:13]  filesize=299259
[2024-04-27 10:46:13]  filetype=log
[2024-04-27 10:46:13]  guid=3b4e393c-dee2-40c0-b99f-c7605d5154c4
[2024-04-27 10:46:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 10:46:13]  is_tar=False
[2024-04-27 10:46:13]  lfn=log.38207159._002714.job.log.tgz.1
[2024-04-27 10:46:13]  mtime=0
[2024-04-27 10:46:13]  protocol_id=None
[2024-04-27 10:46:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 10:46:13]  replicas=None
[2024-04-27 10:46:13]  scope=mc23_13p6TeV
[2024-04-27 10:46:13]  status=None
[2024-04-27 10:46:13]  status_code=0
[2024-04-27 10:46:13]  storage_token=
[2024-04-27 10:46:13]  surl=/scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6186575885/log.38207159._002714.job.log.tgz.1
[2024-04-27 10:46:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/d6/log.38207159._002714.job.log.tgz.1
[2024-04-27 10:46:13]  workdir=None
[2024-04-27 10:46:13] ]
[2024-04-27 10:46:13] 2024-04-27 08:45:56,385 | INFO     | transferring file log.38207159._002714.job.log.tgz.1 from /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6186575885/log.38207159._002714.job.log.tgz.1 to /scratch/b
[2024-04-27 10:46:13] 2024-04-27 08:45:56,385 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6186575885/log.38207159._002714.job.log.tgz.1 /scratch/boinc/var/slot20/slots/0/lo
[2024-04-27 10:46:13] 2024-04-27 08:45:56,405 | INFO     | adding to output.list: log.38207159._002714.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/d6/log.38207159._002714.job.log.tg
[2024-04-27 10:46:13] 2024-04-27 08:45:56,406 | INFO     | summary of transferred files:
[2024-04-27 10:46:13] 2024-04-27 08:45:56,406 | INFO     |  -- lfn=log.38207159._002714.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 10:46:13] 2024-04-27 08:45:56,406 | INFO     | stage-out finished correctly
[2024-04-27 10:46:13] 2024-04-27 08:45:56,554 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 10:46:13] 2024-04-27 08:45:56,720 | INFO     | job 6186575885 has state=finished
[2024-04-27 10:46:13] 2024-04-27 08:45:56,720 | INFO     | preparing for final server update for job 6186575885 in state='finished'
[2024-04-27 10:46:13] 2024-04-27 08:45:56,720 | INFO     | this job has now completed (state=finished)
[2024-04-27 10:46:13] 2024-04-27 08:45:56,720 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 10:46:13] 2024-04-27 08:45:56,720 | INFO     | job 6186575885 has finished - writing final server update
[2024-04-27 10:46:13] 2024-04-27 08:45:56,721 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1509923/.job.ad'
[2024-04-27 10:46:13] 2024-04-27 08:45:56,721 | INFO     | total number of processed events: 400 (read)
[2024-04-27 10:46:13] 2024-04-27 08:45:56,724 | INFO     | executing command: lscpu
[2024-04-27 10:46:13] 2024-04-27 08:45:56,774 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-27 10:46:13] 2024-04-27 08:45:56,775 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 10:46:13] 2024-04-27 08:45:56,804 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 10:46:13] 2024-04-27 08:45:58,066 | INFO     | monitor loop #765: job 0:6186575885 is in state 'finished'
[2024-04-27 10:46:13] 2024-04-27 08:45:58,066 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 10:46:13] 2024-04-27 08:45:59,753 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-27 10:46:13] 2024-04-27 08:45:59,754 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-6186575885/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 10:46:13] 2024-04-27 08:45:59,754 | INFO     | extracted standard info from prmon json
[2024-04-27 10:46:13] 2024-04-27 08:45:59,754 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 10:46:13] 2024-04-27 08:45:59,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 10:46:13] 2024-04-27 08:45:59,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 10:46:13] 2024-04-27 08:45:59,757 | INFO     | fitting pss+swap vs Time
[2024-04-27 10:46:13] 2024-04-27 08:45:59,758 | INFO     | current chi2=4.096153415983582 (change=15.44456974944692 %)
[2024-04-27 10:46:13] 2024-04-27 08:45:59,758 | INFO     | right removable region: 156
[2024-04-27 10:46:13] 2024-04-27 08:45:59,759 | INFO     | current chi2=2.388773828215644 (change=50.689396049504765 %)
[2024-04-27 10:46:13] 2024-04-27 08:45:59,759 | INFO     | current chi2=0.8330571797147429 (change=65.12615929248453 %)
[2024-04-27 10:46:13] 2024-04-27 08:45:59,760 | INFO     | current chi2=0.7855110208545577 (change=5.707430416297001 %)
[2024-04-27 10:46:13] 2024-04-27 08:45:59,760 | INFO     | left removable region: 30
[2024-04-27 10:46:13] 2024-04-27 08:45:59,760 | INFO     | current memory leak: 1.91 B/s (using 126 data points, chi2=0.00)
[2024-04-27 10:46:13] 2024-04-27 08:45:59,760 | INFO     | ..............................
[2024-04-27 10:46:13] 2024-04-27 08:45:59,760 | INFO     | . Timing measurements:
[2024-04-27 10:46:13] 2024-04-27 08:45:59,761 | INFO     | . get job = 0 s
[2024-04-27 10:46:13] 2024-04-27 08:45:59,761 | INFO     | . initial setup = 1 s
[2024-04-27 10:46:13] 2024-04-27 08:45:59,761 | INFO     | . payload setup = 4 s
[2024-04-27 10:46:13] 2024-04-27 08:45:59,761 | INFO     | . stage-in = 0 s
[2024-04-27 10:46:13] 2024-04-27 08:45:59,761 | INFO     | . payload execution = 9836 s
[2024-04-27 10:46:13] 2024-04-27 08:45:59,761 | INFO     | . stage-out = 0 s
[2024-04-27 10:46:13] 2024-04-27 08:45:59,761 | INFO     | . log creation = 0 s
[2024-04-27 10:46:13] 2024-04-27 08:45:59,761 | INFO     | ..............................
[2024-04-27 10:46:13] 2024-04-27 08:45:59,814 | INFO     | 
[2024-04-27 10:46:13] 2024-04-27 08:45:59,814 | INFO     | job summary report
[2024-04-27 10:46:13] 2024-04-27 08:45:59,814 | INFO     | --------------------------------------------------
[2024-04-27 10:46:13] 2024-04-27 08:45:59,814 | INFO     | PanDA job id: 6186575885
[2024-04-27 10:46:13] 2024-04-27 08:45:59,814 | INFO     | task id: 38207159
[2024-04-27 10:46:13] 2024-04-27 08:45:59,814 | INFO     | errors: (none)
[2024-04-27 10:46:13] 2024-04-27 08:45:59,814 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 10:46:13] 2024-04-27 08:45:59,814 | INFO     | pilot state: finished 
[2024-04-27 10:46:13] 2024-04-27 08:45:59,814 | INFO     | transexitcode: 0
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | exeerrorcode: 0
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | exeerrordiag: 
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | exitcode: 0
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | exitmsg: OK
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | cpuconsumptiontime: 36753 s
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | nevents: 400
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | neventsw: 0
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | pid: 1680722
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | pgrp: 1680722
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | corecount: 4
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | event service: False
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | sizes: {0: 2375667, 3: 2375873, 11: 2375901, 9844: 2404459, 9845: 2413441, 9846: 2413497, 9849: 2413795}
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | --------------------------------------------------
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | 
[2024-04-27 10:46:13] 2024-04-27 08:45:59,815 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2024-04-27 10:46:13] 2024-04-27 08:45:59,834 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,834 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,834 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,834 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | job 6186575885 has completed (purged errors)
[2024-04-27 10:46:13] 2024-04-27 08:45:59,835 | INFO     | overall cleanup function is called
[2024-04-27 10:46:13] 2024-04-27 08:46:00,842 | INFO     | --- collectZombieJob: --- 10, [1680722]
[2024-04-27 10:46:13] 2024-04-27 08:46:00,842 | INFO     | zombie collector waiting for pid 1680722
[2024-04-27 10:46:13] 2024-04-27 08:46:00,842 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 10:46:13] 2024-04-27 08:46:01,847 | INFO     | collected zombie processes
[2024-04-27 10:46:13] 2024-04-27 08:46:01,847 | INFO     | will now attempt to kill all subprocesses of pid=1680722
[2024-04-27 10:46:13] 2024-04-27 08:46:01,982 | INFO     | process IDs to be killed: [1680722] (in reverse order)
[2024-04-27 10:46:13] 2024-04-27 08:46:02,080 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 10:46:13] 2024-04-27 08:46:02,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 10:46:13] 2024-04-27 08:46:02,087 | INFO     | did not find any defunct processes belonging to 1680722
[2024-04-27 10:46:13] 2024-04-27 08:46:02,092 | INFO     | did not find any defunct processes belonging to 1680722
[2024-04-27 10:46:13] 2024-04-27 08:46:02,092 | INFO     | ready for new job
[2024-04-27 10:46:13] 2024-04-27 08:46:02,093 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 10:46:13] 2024-04-27 08:46:02,094 | INFO     | *************************************
[2024-04-27 10:46:13] 2024-04-27 08:46:02,094 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 10:46:13] 2024-04-27 08:46:02,094 | INFO     | *************************************
[2024-04-27 10:46:13] 2024-04-27 08:46:02,094 | INFO     | 
[2024-04-27 10:46:13] 2024-04-27 08:46:02,097 | INFO     | architecture information:
[2024-04-27 10:46:13] 2024-04-27 08:46:02,097 | INFO     | executing command: cat /etc/os-release
[2024-04-27 10:46:13] 2024-04-27 08:46:02,111 | INFO     | cat /etc/os-release:
[2024-04-27 10:46:13] NAME="CentOS Linux"
[2024-04-27 10:46:13] VERSION="7 (Core)"
[2024-04-27 10:46:13] ID="centos"
[2024-04-27 10:46:13] ID_LIKE="rhel fedora"
[2024-04-27 10:46:13] VERSION_ID="7"
[2024-04-27 10:46:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 10:46:13] ANSI_COLOR="0;31"
[2024-04-27 10:46:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 10:46:13] HOME_URL="https://www.centos.org/"
[2024-04-27 10:46:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 10:46:13] 
[2024-04-27 10:46:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 10:46:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 10:46:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 10:46:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 10:46:13] 
[2024-04-27 10:46:13] 2024-04-27 08:46:02,111 | INFO     | *************************************
[2024-04-27 10:46:13] 2024-04-27 08:46:02,614 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2024-04-27 10:46:13] 2024-04-27 08:46:02,632 | INFO     | sufficient remaining disk space (625197711360 B)
[2024-04-27 10:46:13] 2024-04-27 08:46:02,632 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 10:46:13] 2024-04-27 08:46:02,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 10:46:13] 2024-04-27 08:46:02,633 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 10:46:13] 2024-04-27 08:46:02,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 10:46:13] 2024-04-27 08:46:02,633 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 10:46:13] 2024-04-27 08:46:02,634 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 10:46:13] 2024-04-27 08:46:02,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 10:46:13] 2024-04-27 08:46:02,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 10:46:13] 2024-04-27 08:46:03,076 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-27 10:46:13] 2024-04-27 08:46:03,076 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-27 10:46:13] 2024-04-27 08:46:03,076 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 10:46:13] 2024-04-27 08:46:03,076 | INFO     | will abort loop
[2024-04-27 10:46:13] 2024-04-27 08:46:03,322 | INFO     | all job control threads have been joined
[2024-04-27 10:46:13] 2024-04-27 08:46:03,374 | INFO     | all payload control threads have been joined
[2024-04-27 10:46:13] 2024-04-27 08:46:03,568 | INFO     | all data control threads have been joined
[2024-04-27 10:46:13] 2024-04-27 08:46:03,638 | INFO     | [job] retrieve thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:03,737 | INFO     | [data] copytool_in thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,040 | INFO     | [payload] validate_post thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,078 | INFO     | [job] job monitor thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,327 | INFO     | [job] control thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,379 | INFO     | [payload] control thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,391 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,573 | INFO     | [data] control thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,639 | INFO     | [data] copytool_out thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,665 | INFO     | [job] validate thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,724 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,818 | INFO     | [payload] failed_post thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 10:46:13] 2024-04-27 08:46:04,893 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:04,993 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:05,829 | INFO     | [job] queue monitor thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:06,639 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 10:46:13] 2024-04-27 08:46:07,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47855656703040)>', '<ExcThread(monitor, started 47855830038272)>']
[2024-04-27 10:46:13] 2024-04-27 08:46:07,659 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 10:46:13] 2024-04-27 08:46:07,659 | INFO     | [monitor] control thread has ended
[2024-04-27 10:46:13] 2024-04-27 08:46:12,273 | INFO     | all workflow threads have been joined
[2024-04-27 10:46:13] 2024-04-27 08:46:12,273 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 10:46:13] 2024-04-27 08:46:12,273 | INFO     | traces error code: 0
[2024-04-27 10:46:13] 2024-04-27 08:46:12,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 10:46:13] 2024-04-27 08:46:12,341 [wrapper] ==== pilot stdout END ====
[2024-04-27 10:46:13] 2024-04-27 08:46:12,343 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 10:46:13] 2024-04-27 08:46:12,344 [wrapper] pilotpid: 1673708
[2024-04-27 10:46:13] 2024-04-27 08:46:12,346 [wrapper] Pilot exit status: 0
[2024-04-27 10:46:13] 2024-04-27 08:46:12,352 [wrapper] pandaids: 6186575885
[2024-04-27 10:46:13] 2024-04-27 08:46:12,404 [wrapper] cleanup: SIGTERM to supervisor_pilot 2124663 1673709
[2024-04-27 10:46:13] 2024-04-27 08:46:12,406 [wrapper] Test setup, not cleaning
[2024-04-27 10:46:13] 2024-04-27 08:46:12,409 [wrapper] ==== wrapper stdout END ====
[2024-04-27 10:46:13] 2024-04-27 08:46:12,411 [wrapper] ==== wrapper stderr END ====
[2024-04-27 10:46:13] 2024-04-27 08:46:12,415 [wrapper] apfmon messages muted
[2024-04-27 10:46:13]  *** Error codes and diagnostics ***
[2024-04-27 10:46:13]     "exeErrorCode": 0,
[2024-04-27 10:46:13]     "exeErrorDiag": "",
[2024-04-27 10:46:13]     "pilotErrorCode": 0,
[2024-04-27 10:46:13]     "pilotErrorDiag": "",
[2024-04-27 10:46:13]  *** Listing of results directory ***
[2024-04-27 10:46:13] total 703196
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc    462745 Apr 25 17:49 pilot3.tar.gz
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc      6173 Apr 25 17:58 queuedata.json
[2024-04-27 10:46:13] -rwx------ 1 boinc boinc     32211 Apr 25 17:59 runpilot2-wrapper.sh
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc       100 Apr 27 07:19 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 10:46:13] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 07:19 run_atlas
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc       105 Apr 27 07:19 job.xml
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc      6663 Apr 27 08:01 init_data.xml
[2024-04-27 10:46:13] -rw-r--r-- 2 boinc boinc 519432230 Apr 27 08:01 EVNT.38207157._000104.pool.root.1
[2024-04-27 10:46:13] -rw-r--r-- 2 boinc boinc     17537 Apr 27 08:01 start_atlas.sh
[2024-04-27 10:46:13] drwxrwx--x 2 boinc boinc      4096 Apr 27 08:01 shared
[2024-04-27 10:46:13] -rw-r--r-- 2 boinc boinc    474810 Apr 27 08:01 input.tar.gz
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc         0 Apr 27 08:01 boinc_lockfile
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc      2650 Apr 27 08:01 pandaJob.out
[2024-04-27 10:46:13] -rw------- 1 boinc boinc       424 Apr 27 08:01 setup.sh.local
[2024-04-27 10:46:13] -rw------- 1 boinc boinc    997391 Apr 27 08:01 agis_schedconf.cvmfs.json
[2024-04-27 10:46:13] -rw------- 1 boinc boinc         0 Apr 27 08:01 agis_ddmendpoints.agis.ALL.json
[2024-04-27 10:46:13] -rw------- 1 boinc boinc   1315307 Apr 27 08:01 cric_ddmendpoints.json
[2024-04-27 10:46:13] drwx------ 4 boinc boinc      4096 Apr 27 08:01 pilot3
[2024-04-27 10:46:13] -rw------- 1 boinc boinc 194646022 Apr 27 10:45 HITS.38207159._002714.pool.root.1
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc       531 Apr 27 10:45 boinc_task_state.xml
[2024-04-27 10:46:13] -rw------- 1 boinc boinc      1045 Apr 27 10:45 memory_monitor_summary.json
[2024-04-27 10:46:13] -rw------- 1 boinc boinc    299259 Apr 27 10:45 log.38207159._002714.job.log.tgz.1
[2024-04-27 10:46:13] -rw------- 1 boinc boinc      7731 Apr 27 10:45 heartbeat.json
[2024-04-27 10:46:13] -rw------- 1 boinc boinc        95 Apr 27 10:46 pilot_heartbeat.json
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc      8192 Apr 27 10:46 boinc_mmap_file
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc        27 Apr 27 10:46 wrapper_checkpoint.txt
[2024-04-27 10:46:13] -rw------- 1 boinc boinc      4530 Apr 27 10:46 pilotlog.txt
[2024-04-27 10:46:13] -rw------- 1 boinc boinc    950495 Apr 27 10:46 log.38207159._002714.job.log.1
[2024-04-27 10:46:13] -rw------- 1 boinc boinc       357 Apr 27 10:46 output.list
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc       620 Apr 27 10:46 runtime_log
[2024-04-27 10:46:13] -rw------- 1 boinc boinc   1269760 Apr 27 10:46 result.tar.gz
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc     11409 Apr 27 10:46 runtime_log.err
[2024-04-27 10:46:13] -rw------- 1 boinc boinc       655 Apr 27 10:46 QlVMDmCgGK5n9Rq4apoT9bVoABFKDmABFKDmtztZDmwbOKDmHEqjlm.diag
[2024-04-27 10:46:13] -rw-r--r-- 1 boinc boinc     20916 Apr 27 10:46 stderr.txt
[2024-04-27 10:46:13] HITS file was successfully produced:
[2024-04-27 10:46:13] -rw------- 1 boinc boinc 194646022 Apr 27 10:45 shared/HITS.pool.root.1
[2024-04-27 10:46:13]  *** Contents of shared directory: ***
[2024-04-27 10:46:13] total 699080
[2024-04-27 10:46:13] -rw-r--r-- 2 boinc boinc 519432230 Apr 27 08:01 ATLAS.root_0
[2024-04-27 10:46:13] -rw-r--r-- 2 boinc boinc     17537 Apr 27 08:01 start_atlas.sh
[2024-04-27 10:46:13] -rw-r--r-- 2 boinc boinc    474810 Apr 27 08:01 input.tar.gz
[2024-04-27 10:46:13] -rw------- 1 boinc boinc 194646022 Apr 27 10:45 HITS.pool.root.1
[2024-04-27 10:46:13] -rw------- 1 boinc boinc   1269760 Apr 27 10:46 result.tar.gz
10:46:14 (1669368): run_atlas exited; CPU time 36540.884147
10:46:14 (1669368): called boinc_finish(0)

</stderr_txt>
]]>

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