Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:44:41 (1941719): wrapper (7.7.26015): starting
14:44:41 (1941719): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 14:44:41] Arguments: --nthreads 4
[2024-04-27 14:44:41] Threads: 4
[2024-04-27 14:44:41] Checking for CVMFS
[2024-04-27 14:44:41] No cvmfs_config command found, will try listing directly
[2024-04-27 14:44:41] CVMFS is ok
[2024-04-27 14:44:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 14:44:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 14:44:41] Further information can be found at the LHC@home message board.
[2024-04-27 14:44:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 14:44:41] Checking for apptainer binary...
[2024-04-27 14:44:41] which: no apptainer in ((null))
[2024-04-27 14:44:41] apptainer is not installed, using version from CVMFS
[2024-04-27 14:44:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 14:44:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-04-27 14:44:42] apptainer works
[2024-04-27 14:44:42] Set ATHENA_PROC_NUMBER=4
[2024-04-27 14:44:42] Set ATHENA_CORE_NUMBER=4
[2024-04-27 14:44:42] Starting ATLAS job with PandaID=6185366039
[2024-04-27 14:44:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 17:40:48]  *** The last 200 lines of the pilot log: ***
[2024-04-27 17:40:48]  direct_access_wan=False
[2024-04-27 17:40:48]  domain=
[2024-04-27 17:40:48]  filesize=289247
[2024-04-27 17:40:48]  filetype=log
[2024-04-27 17:40:48]  guid=8d6c6fe6-8661-46ec-81b7-df1561c21649
[2024-04-27 17:40:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 17:40:48]  is_tar=False
[2024-04-27 17:40:48]  lfn=log.38204311._003929.job.log.tgz.1
[2024-04-27 17:40:48]  mtime=0
[2024-04-27 17:40:48]  protocol_id=None
[2024-04-27 17:40:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 17:40:48]  replicas=None
[2024-04-27 17:40:48]  scope=mc23_13p6TeV
[2024-04-27 17:40:48]  status=None
[2024-04-27 17:40:48]  status_code=0
[2024-04-27 17:40:48]  storage_token=
[2024-04-27 17:40:48]  surl=/scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6185366039/log.38204311._003929.job.log.tgz.1
[2024-04-27 17:40:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/06/log.38204311._003929.job.log.tgz.1
[2024-04-27 17:40:48]  workdir=None
[2024-04-27 17:40:48] ]
[2024-04-27 17:40:48] 2024-04-27 15:40:19,036 | INFO     | transferring file log.38204311._003929.job.log.tgz.1 from /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6185366039/log.38204311._003929.job.log.tgz.1 to /scratch/b
[2024-04-27 17:40:48] 2024-04-27 15:40:19,037 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6185366039/log.38204311._003929.job.log.tgz.1 /scratch/boinc/var/slot84/slots/0/lo
[2024-04-27 17:40:48] 2024-04-27 15:40:19,058 | INFO     | adding to output.list: log.38204311._003929.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/06/log.38204311._003929.job.log.tg
[2024-04-27 17:40:48] 2024-04-27 15:40:19,059 | INFO     | summary of transferred files:
[2024-04-27 17:40:48] 2024-04-27 15:40:19,059 | INFO     |  -- lfn=log.38204311._003929.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 17:40:48] 2024-04-27 15:40:19,059 | INFO     | stage-out finished correctly
[2024-04-27 17:40:48] 2024-04-27 15:40:19,885 | INFO     | monitor loop #794: job 0:6185366039 is in state 'finished'
[2024-04-27 17:40:48] 2024-04-27 15:40:19,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 17:40:48] 2024-04-27 15:40:20,117 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 17:40:48] 2024-04-27 15:40:20,206 | INFO     | job 6185366039 has state=finished
[2024-04-27 17:40:48] 2024-04-27 15:40:20,206 | INFO     | preparing for final server update for job 6185366039 in state='finished'
[2024-04-27 17:40:48] 2024-04-27 15:40:20,207 | INFO     | this job has now completed (state=finished)
[2024-04-27 17:40:48] 2024-04-27 15:40:20,207 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 17:40:48] 2024-04-27 15:40:20,207 | INFO     | job 6185366039 has finished - writing final server update
[2024-04-27 17:40:48] 2024-04-27 15:40:20,207 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_723462/.job.ad'
[2024-04-27 17:40:48] 2024-04-27 15:40:20,208 | INFO     | total number of processed events: 400 (read)
[2024-04-27 17:40:48] 2024-04-27 15:40:20,216 | INFO     | executing command: lscpu
[2024-04-27 17:40:48] 2024-04-27 15:40:20,317 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-27 17:40:48] 2024-04-27 15:40:20,317 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 17:40:48] 2024-04-27 15:40:20,397 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 17:40:48] 2024-04-27 15:40:22,392 | INFO     | monitor loop #795: job 0:6185366039 is in state 'finished'
[2024-04-27 17:40:48] 2024-04-27 15:40:22,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 17:40:48] 2024-04-27 15:40:24,896 | INFO     | monitor loop #796: job 0:6185366039 is in state 'finished'
[2024-04-27 17:40:48] 2024-04-27 15:40:24,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 17:40:48] 2024-04-27 15:40:25,872 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 17:40:48] 2024-04-27 15:40:25,872 | INFO     | using path: /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6185366039/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 17:40:48] 2024-04-27 15:40:25,873 | INFO     | extracted standard info from prmon json
[2024-04-27 17:40:48] 2024-04-27 15:40:25,874 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 17:40:48] 2024-04-27 15:40:25,874 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 17:40:48] 2024-04-27 15:40:25,874 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 17:40:48] 2024-04-27 15:40:25,878 | INFO     | fitting pss+swap vs Time
[2024-04-27 17:40:48] 2024-04-27 15:40:25,880 | INFO     | current chi2=4.162236088087586 (change=0.08062915094245415 %)
[2024-04-27 17:40:48] 2024-04-27 15:40:25,880 | INFO     | right removable region: 166
[2024-04-27 17:40:48] 2024-04-27 15:40:25,882 | INFO     | current chi2=1.6433882809081022 (change=60.54853217985063 %)
[2024-04-27 17:40:48] 2024-04-27 15:40:25,883 | INFO     | current chi2=0.08062845368859028 (change=95.0937672718442 %)
[2024-04-27 17:40:48] 2024-04-27 15:40:25,884 | INFO     | current chi2=0.0011410071152208314 (change=98.58485799612663 %)
[2024-04-27 17:40:48] 2024-04-27 15:40:25,885 | INFO     | current chi2=0.0010437629971870878 (change=8.522656584391491 %)
[2024-04-27 17:40:48] 2024-04-27 15:40:25,885 | INFO     | left removable region: 40
[2024-04-27 17:40:48] 2024-04-27 15:40:25,886 | INFO     | current memory leak: 1.63 B/s (using 126 data points, chi2=0.00)
[2024-04-27 17:40:48] 2024-04-27 15:40:25,887 | INFO     | ..............................
[2024-04-27 17:40:48] 2024-04-27 15:40:25,887 | INFO     | . Timing measurements:
[2024-04-27 17:40:48] 2024-04-27 15:40:25,887 | INFO     | . get job = 0 s
[2024-04-27 17:40:48] 2024-04-27 15:40:25,887 | INFO     | . initial setup = 1 s
[2024-04-27 17:40:48] 2024-04-27 15:40:25,887 | INFO     | . payload setup = 7 s
[2024-04-27 17:40:48] 2024-04-27 15:40:25,887 | INFO     | . stage-in = 0 s
[2024-04-27 17:40:48] 2024-04-27 15:40:25,887 | INFO     | . payload execution = 10494 s
[2024-04-27 17:40:48] 2024-04-27 15:40:25,887 | INFO     | . stage-out = 0 s
[2024-04-27 17:40:48] 2024-04-27 15:40:25,887 | INFO     | . log creation = 0 s
[2024-04-27 17:40:48] 2024-04-27 15:40:25,887 | INFO     | ..............................
[2024-04-27 17:40:48] 2024-04-27 15:40:26,007 | INFO     | 
[2024-04-27 17:40:48] 2024-04-27 15:40:26,007 | INFO     | job summary report
[2024-04-27 17:40:48] 2024-04-27 15:40:26,007 | INFO     | --------------------------------------------------
[2024-04-27 17:40:48] 2024-04-27 15:40:26,007 | INFO     | PanDA job id: 6185366039
[2024-04-27 17:40:48] 2024-04-27 15:40:26,007 | INFO     | task id: 38204311
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | errors: (none)
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | pilot state: finished 
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | transexitcode: 0
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | exeerrorcode: 0
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | exeerrordiag: 
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | exitcode: 0
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | exitmsg: OK
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | cpuconsumptiontime: 38835 s
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | nevents: 400
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | neventsw: 0
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | pid: 1955082
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | pgrp: 1955082
[2024-04-27 17:40:48] 2024-04-27 15:40:26,008 | INFO     | corecount: 4
[2024-04-27 17:40:48] 2024-04-27 15:40:26,009 | INFO     | event service: False
[2024-04-27 17:40:48] 2024-04-27 15:40:26,009 | INFO     | sizes: {0: 2375496, 1: 2375695, 9: 2375901, 11: 2375929, 10504: 2404673, 10505: 2404672, 10507: 2413838, 10508: 2413894, 10514: 2414064}
[2024-04-27 17:40:48] 2024-04-27 15:40:26,009 | INFO     | --------------------------------------------------
[2024-04-27 17:40:48] 2024-04-27 15:40:26,009 | INFO     | 
[2024-04-27 17:40:48] 2024-04-27 15:40:26,009 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2024-04-27 17:40:48] 2024-04-27 15:40:26,035 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,035 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,035 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 17:40:48] 2024-04-27 15:40:26,036 | INFO     | job 6185366039 has completed (purged errors)
[2024-04-27 17:40:48] 2024-04-27 15:40:26,037 | INFO     | overall cleanup function is called
[2024-04-27 17:40:48] 2024-04-27 15:40:27,043 | INFO     | --- collectZombieJob: --- 10, [1955082]
[2024-04-27 17:40:48] 2024-04-27 15:40:27,044 | INFO     | zombie collector waiting for pid 1955082
[2024-04-27 17:40:48] 2024-04-27 15:40:27,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 17:40:48] 2024-04-27 15:40:28,048 | INFO     | collected zombie processes
[2024-04-27 17:40:48] 2024-04-27 15:40:28,049 | INFO     | will now attempt to kill all subprocesses of pid=1955082
[2024-04-27 17:40:48] 2024-04-27 15:40:28,297 | INFO     | process IDs to be killed: [1955082] (in reverse order)
[2024-04-27 17:40:48] 2024-04-27 15:40:28,466 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 17:40:48] 2024-04-27 15:40:28,466 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 17:40:48] 2024-04-27 15:40:28,479 | INFO     | did not find any defunct processes belonging to 1955082
[2024-04-27 17:40:48] 2024-04-27 15:40:28,488 | INFO     | did not find any defunct processes belonging to 1955082
[2024-04-27 17:40:48] 2024-04-27 15:40:28,488 | INFO     | ready for new job
[2024-04-27 17:40:48] 2024-04-27 15:40:28,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 17:40:48] 2024-04-27 15:40:28,489 | INFO     | *************************************
[2024-04-27 17:40:48] 2024-04-27 15:40:28,490 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 17:40:48] 2024-04-27 15:40:28,490 | INFO     | *************************************
[2024-04-27 17:40:48] 2024-04-27 15:40:28,490 | INFO     | 
[2024-04-27 17:40:48] 2024-04-27 15:40:28,495 | INFO     | architecture information:
[2024-04-27 17:40:48] 2024-04-27 15:40:28,495 | INFO     | executing command: cat /etc/os-release
[2024-04-27 17:40:48] 2024-04-27 15:40:28,507 | INFO     | cat /etc/os-release:
[2024-04-27 17:40:48] NAME="CentOS Linux"
[2024-04-27 17:40:48] VERSION="7 (Core)"
[2024-04-27 17:40:48] ID="centos"
[2024-04-27 17:40:48] ID_LIKE="rhel fedora"
[2024-04-27 17:40:48] VERSION_ID="7"
[2024-04-27 17:40:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 17:40:48] ANSI_COLOR="0;31"
[2024-04-27 17:40:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 17:40:48] HOME_URL="https://www.centos.org/"
[2024-04-27 17:40:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 17:40:48] 
[2024-04-27 17:40:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 17:40:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 17:40:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 17:40:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 17:40:48] 
[2024-04-27 17:40:48] 2024-04-27 15:40:28,507 | INFO     | *************************************
[2024-04-27 17:40:48] 2024-04-27 15:40:29,009 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2024-04-27 17:40:48] 2024-04-27 15:40:29,024 | INFO     | sufficient remaining disk space (3030374154240 B)
[2024-04-27 17:40:48] 2024-04-27 15:40:29,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 17:40:48] 2024-04-27 15:40:29,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 17:40:48] 2024-04-27 15:40:29,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 17:40:48] 2024-04-27 15:40:29,025 | INFO     | aborting loop
[2024-04-27 17:40:48] 2024-04-27 15:40:29,600 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 17:40:48] 2024-04-27 15:40:29,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 17:40:48] 2024-04-27 15:40:29,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 17:40:48] 2024-04-27 15:40:29,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 17:40:48] 2024-04-27 15:40:29,816 | INFO     | all job control threads have been joined
[2024-04-27 17:40:48] 2024-04-27 15:40:29,903 | INFO     | all data control threads have been joined
[2024-04-27 17:40:48] 2024-04-27 15:40:30,029 | INFO     | [job] retrieve thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:30,030 | INFO     | [job] job monitor thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:30,171 | INFO     | [payload] failed_post thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:30,317 | INFO     | all payload control threads have been joined
[2024-04-27 17:40:48] 2024-04-27 15:40:30,377 | INFO     | [data] copytool_in thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:30,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 17:40:48] 2024-04-27 15:40:30,821 | INFO     | [job] control thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:30,848 | INFO     | [job] validate thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:30,908 | INFO     | [data] control thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:30,974 | INFO     | [payload] validate_post thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:30,998 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:31,017 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 17:40:48] 2024-04-27 15:40:31,269 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:31,294 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:31,322 | INFO     | [payload] control thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:31,645 | INFO     | [data] copytool_out thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:32,022 | INFO     | [job] queue monitor thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:34,722 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:39,619 | INFO     | job.realtimelogging is not enabled
[2024-04-27 17:40:48] 2024-04-27 15:40:40,624 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 17:40:48] 2024-04-27 15:40:42,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47931493360704)>', '<ExcThread(monitor, started 47931664594688)>']
[2024-04-27 17:40:48] 2024-04-27 15:40:42,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 17:40:48] 2024-04-27 15:40:42,662 | INFO     | [monitor] control thread has ended
[2024-04-27 17:40:48] 2024-04-27 15:40:47,620 | INFO     | all workflow threads have been joined
[2024-04-27 17:40:48] 2024-04-27 15:40:47,621 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 17:40:48] 2024-04-27 15:40:47,621 | INFO     | traces error code: 0
[2024-04-27 17:40:48] 2024-04-27 15:40:47,621 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 17:40:48] 2024-04-27 15:40:47,710 [wrapper] ==== pilot stdout END ====
[2024-04-27 17:40:48] 2024-04-27 15:40:47,713 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 17:40:48] 2024-04-27 15:40:47,715 [wrapper] pilotpid: 1946645
[2024-04-27 17:40:48] 2024-04-27 15:40:47,717 [wrapper] Pilot exit status: 0
[2024-04-27 17:40:48] 2024-04-27 15:40:47,725 [wrapper] pandaids: 6185366039
[2024-04-27 17:40:48] 2024-04-27 15:40:47,852 [wrapper] cleanup: SIGTERM to supervisor_pilot 2922917 1946646
[2024-04-27 17:40:48] 2024-04-27 15:40:47,855 [wrapper] Test setup, not cleaning
[2024-04-27 17:40:48] 2024-04-27 15:40:47,857 [wrapper] ==== wrapper stdout END ====
[2024-04-27 17:40:48] 2024-04-27 15:40:47,859 [wrapper] ==== wrapper stderr END ====
[2024-04-27 17:40:48] 2024-04-27 15:40:47,866 [wrapper] apfmon messages muted
[2024-04-27 17:40:48]  *** Error codes and diagnostics ***
[2024-04-27 17:40:48]     "exeErrorCode": 0,
[2024-04-27 17:40:48]     "exeErrorDiag": "",
[2024-04-27 17:40:48]     "pilotErrorCode": 0,
[2024-04-27 17:40:48]     "pilotErrorDiag": "",
[2024-04-27 17:40:48]  *** Listing of results directory ***
[2024-04-27 17:40:48] total 611764
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc    462745 Apr 25 02:00 pilot3.tar.gz
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc      6720 Apr 25 02:05 queuedata.json
[2024-04-27 17:40:48] -rwx------ 1 boinc boinc     32211 Apr 25 02:05 runpilot2-wrapper.sh
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc       100 Apr 27 14:44 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 17:40:48] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 14:44 run_atlas
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc       105 Apr 27 14:44 job.xml
[2024-04-27 17:40:48] -rw-r--r-- 2 boinc boinc 447731636 Apr 27 14:44 EVNT.38204309._000179.pool.root.1
[2024-04-27 17:40:48] -rw-r--r-- 2 boinc boinc     17537 Apr 27 14:44 start_atlas.sh
[2024-04-27 17:40:48] drwxrwx--x 2 boinc boinc      4096 Apr 27 14:44 shared
[2024-04-27 17:40:48] -rw-r--r-- 2 boinc boinc    474800 Apr 27 14:44 input.tar.gz
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc      6643 Apr 27 14:44 init_data.xml
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc         0 Apr 27 14:44 boinc_lockfile
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc      2608 Apr 27 14:44 pandaJob.out
[2024-04-27 17:40:48] -rw------- 1 boinc boinc       424 Apr 27 14:44 setup.sh.local
[2024-04-27 17:40:48] -rw------- 1 boinc boinc    997154 Apr 27 14:44 agis_schedconf.cvmfs.json
[2024-04-27 17:40:48] -rw------- 1 boinc boinc         0 Apr 27 14:44 agis_ddmendpoints.agis.ALL.json
[2024-04-27 17:40:48] -rw------- 1 boinc boinc   1315307 Apr 27 14:44 cric_ddmendpoints.json
[2024-04-27 17:40:48] drwx------ 4 boinc boinc      4096 Apr 27 14:44 pilot3
[2024-04-27 17:40:48] -rw------- 1 boinc boinc 172666283 Apr 27 17:39 HITS.38204311._003929.pool.root.1
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc       531 Apr 27 17:40 boinc_task_state.xml
[2024-04-27 17:40:48] -rw------- 1 boinc boinc      1051 Apr 27 17:40 memory_monitor_summary.json
[2024-04-27 17:40:48] -rw------- 1 boinc boinc    289247 Apr 27 17:40 log.38204311._003929.job.log.tgz.1
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc        28 Apr 27 17:40 wrapper_checkpoint.txt
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc      8192 Apr 27 17:40 boinc_mmap_file
[2024-04-27 17:40:48] -rw------- 1 boinc boinc      7690 Apr 27 17:40 heartbeat.json
[2024-04-27 17:40:48] -rw------- 1 boinc boinc        95 Apr 27 17:40 pilot_heartbeat.json
[2024-04-27 17:40:48] -rw------- 1 boinc boinc      4294 Apr 27 17:40 pilotlog.txt
[2024-04-27 17:40:48] -rw------- 1 boinc boinc    988293 Apr 27 17:40 log.38204311._003929.job.log.1
[2024-04-27 17:40:48] -rw------- 1 boinc boinc       357 Apr 27 17:40 output.list
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc       620 Apr 27 17:40 runtime_log
[2024-04-27 17:40:48] -rw------- 1 boinc boinc   1300480 Apr 27 17:40 result.tar.gz
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc     11410 Apr 27 17:40 runtime_log.err
[2024-04-27 17:40:48] -rw------- 1 boinc boinc       657 Apr 27 17:40 pa6MDmTn1J5nsSi4apGgGQJmABFKDmABFKDmRLXKDmIjRKDm1YTLTo.diag
[2024-04-27 17:40:48] -rw-r--r-- 1 boinc boinc     21148 Apr 27 17:40 stderr.txt
[2024-04-27 17:40:48] HITS file was successfully produced:
[2024-04-27 17:40:48] -rw------- 1 boinc boinc 172666283 Apr 27 17:39 shared/HITS.pool.root.1
[2024-04-27 17:40:48]  *** Contents of shared directory: ***
[2024-04-27 17:40:48] total 607624
[2024-04-27 17:40:48] -rw-r--r-- 2 boinc boinc 447731636 Apr 27 14:44 ATLAS.root_0
[2024-04-27 17:40:48] -rw-r--r-- 2 boinc boinc     17537 Apr 27 14:44 start_atlas.sh
[2024-04-27 17:40:48] -rw-r--r-- 2 boinc boinc    474800 Apr 27 14:44 input.tar.gz
[2024-04-27 17:40:48] -rw------- 1 boinc boinc 172666283 Apr 27 17:39 HITS.pool.root.1
[2024-04-27 17:40:48] -rw------- 1 boinc boinc   1300480 Apr 27 17:40 result.tar.gz
17:40:50 (1941719): run_atlas exited; CPU time 38578.561432
17:40:50 (1941719): called boinc_finish(0)

</stderr_txt>
]]>

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