Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:46:54 (1197172): wrapper (7.7.26015): starting
11:46:54 (1197172): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 11:46:54] Arguments: --nthreads 4
[2024-04-27 11:46:54] Threads: 4
[2024-04-27 11:46:54] Checking for CVMFS
[2024-04-27 11:46:54] No cvmfs_config command found, will try listing directly
[2024-04-27 11:46:54] CVMFS is ok
[2024-04-27 11:46:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 11:46:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 11:46:54] Further information can be found at the LHC@home message board.
[2024-04-27 11:46:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 11:46:54] Checking for apptainer binary...
[2024-04-27 11:46:54] which: no apptainer in ((null))
[2024-04-27 11:46:54] apptainer is not installed, using version from CVMFS
[2024-04-27 11:46:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 11:46:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-04-27 11:46:56] apptainer works
[2024-04-27 11:46:56] Set ATHENA_PROC_NUMBER=4
[2024-04-27 11:46:56] Set ATHENA_CORE_NUMBER=4
[2024-04-27 11:46:56] Starting ATLAS job with PandaID=6186149500
[2024-04-27 11:46:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 14:23:20]  *** The last 200 lines of the pilot log: ***
[2024-04-27 14:23:20]  is_tar=False
[2024-04-27 14:23:20]  lfn=log.38207159._001971.job.log.tgz.1
[2024-04-27 14:23:20]  mtime=0
[2024-04-27 14:23:20]  protocol_id=None
[2024-04-27 14:23:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 14:23:20]  replicas=None
[2024-04-27 14:23:20]  scope=mc23_13p6TeV
[2024-04-27 14:23:20]  status=None
[2024-04-27 14:23:20]  status_code=0
[2024-04-27 14:23:20]  storage_token=
[2024-04-27 14:23:20]  surl=/scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6186149500/log.38207159._001971.job.log.tgz.1
[2024-04-27 14:23:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/09/log.38207159._001971.job.log.tgz.1
[2024-04-27 14:23:20]  workdir=None
[2024-04-27 14:23:20] ]
[2024-04-27 14:23:20] 2024-04-27 12:22:45,050 | INFO     | transferring file log.38207159._001971.job.log.tgz.1 from /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6186149500/log.38207159._001971.job.log.tgz.1 to /scratch/b
[2024-04-27 14:23:20] 2024-04-27 12:22:45,051 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6186149500/log.38207159._001971.job.log.tgz.1 /scratch/boinc/var/slot76/slots/0/lo
[2024-04-27 14:23:20] 2024-04-27 12:22:45,073 | INFO     | adding to output.list: log.38207159._001971.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f9/09/log.38207159._001971.job.log.tg
[2024-04-27 14:23:20] 2024-04-27 12:22:45,074 | INFO     | summary of transferred files:
[2024-04-27 14:23:20] 2024-04-27 12:22:45,074 | INFO     |  -- lfn=log.38207159._001971.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 14:23:20] 2024-04-27 12:22:45,074 | INFO     | stage-out finished correctly
[2024-04-27 14:23:20] 2024-04-27 12:22:45,706 | INFO     | monitor loop #702: job 0:6186149500 is in state 'finished'
[2024-04-27 14:23:20] 2024-04-27 12:22:45,706 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 14:23:20] 2024-04-27 12:22:48,209 | INFO     | monitor loop #703: job 0:6186149500 is in state 'finished'
[2024-04-27 14:23:20] 2024-04-27 12:22:48,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 14:23:20] 2024-04-27 12:22:48,562 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 14:23:20] 2024-04-27 12:22:50,712 | INFO     | monitor loop #704: job 0:6186149500 is in state 'finished'
[2024-04-27 14:23:20] 2024-04-27 12:22:50,712 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 14:23:20] 2024-04-27 12:22:51,562 | INFO     | job 6186149500 has state=finished
[2024-04-27 14:23:20] 2024-04-27 12:22:51,562 | INFO     | preparing for final server update for job 6186149500 in state='finished'
[2024-04-27 14:23:20] 2024-04-27 12:22:51,562 | INFO     | this job has now completed (state=finished)
[2024-04-27 14:23:20] 2024-04-27 12:22:51,563 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 14:23:20] 2024-04-27 12:22:51,563 | INFO     | job 6186149500 has finished - writing final server update
[2024-04-27 14:23:20] 2024-04-27 12:22:51,563 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3262736/.job.ad'
[2024-04-27 14:23:20] 2024-04-27 12:22:51,563 | INFO     | total number of processed events: 400 (read)
[2024-04-27 14:23:20] 2024-04-27 12:22:51,571 | INFO     | executing command: lscpu
[2024-04-27 14:23:20] 2024-04-27 12:22:51,630 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-27 14:23:20] 2024-04-27 12:22:51,631 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 14:23:20] 2024-04-27 12:22:51,680 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 14:23:20] 2024-04-27 12:22:53,216 | INFO     | monitor loop #705: job 0:6186149500 is in state 'finished'
[2024-04-27 14:23:20] 2024-04-27 12:22:53,216 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 14:23:20] 2024-04-27 12:22:55,721 | INFO     | monitor loop #706: job 0:6186149500 is in state 'finished'
[2024-04-27 14:23:20] 2024-04-27 12:22:55,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-27 14:23:20] 2024-04-27 12:22:57,421 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 14:23:20] 2024-04-27 12:22:57,422 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-6186149500/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 14:23:20] 2024-04-27 12:22:57,423 | INFO     | extracted standard info from prmon json
[2024-04-27 14:23:20] 2024-04-27 12:22:57,423 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 14:23:20] 2024-04-27 12:22:57,424 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 14:23:20] 2024-04-27 12:22:57,424 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 14:23:20] 2024-04-27 12:22:57,428 | INFO     | fitting pss+swap vs Time
[2024-04-27 14:23:20] 2024-04-27 12:22:57,431 | INFO     | current chi2=4.133727982036163 (change=15.708359940922001 %)
[2024-04-27 14:23:20] 2024-04-27 12:22:57,431 | INFO     | right removable region: 147
[2024-04-27 14:23:20] 2024-04-27 12:22:57,432 | INFO     | current chi2=2.3682872640157577 (change=51.70780020300608 %)
[2024-04-27 14:23:20] 2024-04-27 12:22:57,433 | INFO     | current chi2=0.8649982370324723 (change=63.47578901531783 %)
[2024-04-27 14:23:20] 2024-04-27 12:22:57,434 | INFO     | current chi2=0.8111954678655687 (change=6.219985991125639 %)
[2024-04-27 14:23:20] 2024-04-27 12:22:57,434 | INFO     | left removable region: 30
[2024-04-27 14:23:20] 2024-04-27 12:22:57,435 | INFO     | current memory leak: 3.51 B/s (using 117 data points, chi2=0.00)
[2024-04-27 14:23:20] 2024-04-27 12:22:57,436 | INFO     | ..............................
[2024-04-27 14:23:20] 2024-04-27 12:22:57,436 | INFO     | . Timing measurements:
[2024-04-27 14:23:20] 2024-04-27 12:22:57,436 | INFO     | . get job = 0 s
[2024-04-27 14:23:20] 2024-04-27 12:22:57,436 | INFO     | . initial setup = 1 s
[2024-04-27 14:23:20] 2024-04-27 12:22:57,436 | INFO     | . payload setup = 9 s
[2024-04-27 14:23:20] 2024-04-27 12:22:57,436 | INFO     | . stage-in = 0 s
[2024-04-27 14:23:20] 2024-04-27 12:22:57,436 | INFO     | . payload execution = 9300 s
[2024-04-27 14:23:20] 2024-04-27 12:22:57,436 | INFO     | . stage-out = 0 s
[2024-04-27 14:23:20] 2024-04-27 12:22:57,436 | INFO     | . log creation = 0 s
[2024-04-27 14:23:20] 2024-04-27 12:22:57,436 | INFO     | ..............................
[2024-04-27 14:23:20] 2024-04-27 12:22:57,553 | INFO     | 
[2024-04-27 14:23:20] 2024-04-27 12:22:57,553 | INFO     | job summary report
[2024-04-27 14:23:20] 2024-04-27 12:22:57,553 | INFO     | --------------------------------------------------
[2024-04-27 14:23:20] 2024-04-27 12:22:57,553 | INFO     | PanDA job id: 6186149500
[2024-04-27 14:23:20] 2024-04-27 12:22:57,553 | INFO     | task id: 38207159
[2024-04-27 14:23:20] 2024-04-27 12:22:57,553 | INFO     | errors: (none)
[2024-04-27 14:23:20] 2024-04-27 12:22:57,553 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 14:23:20] 2024-04-27 12:22:57,553 | INFO     | pilot state: finished 
[2024-04-27 14:23:20] 2024-04-27 12:22:57,553 | INFO     | transexitcode: 0
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | exeerrorcode: 0
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | exeerrordiag: 
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | exitcode: 0
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | exitmsg: OK
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | cpuconsumptiontime: 34321 s
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | nevents: 400
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | neventsw: 0
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | pid: 1222220
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | pgrp: 1222220
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | corecount: 4
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | event service: False
[2024-04-27 14:23:20] 2024-04-27 12:22:57,554 | INFO     | sizes: {0: 2375716, 1: 2375716, 8: 2375950, 11: 2375978, 9313: 2404116, 9314: 2413098, 9318: 2413282, 9326: 2413452}
[2024-04-27 14:23:20] 2024-04-27 12:22:57,555 | INFO     | --------------------------------------------------
[2024-04-27 14:23:20] 2024-04-27 12:22:57,555 | INFO     | 
[2024-04-27 14:23:20] 2024-04-27 12:22:57,555 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2024-04-27 14:23:20] 2024-04-27 12:22:57,586 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,586 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,586 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,586 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,587 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,587 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,587 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,587 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,587 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,587 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,588 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 14:23:20] 2024-04-27 12:22:57,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,588 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 14:23:20] 2024-04-27 12:22:57,588 | INFO     | job 6186149500 has completed (purged errors)
[2024-04-27 14:23:20] 2024-04-27 12:22:57,588 | INFO     | overall cleanup function is called
[2024-04-27 14:23:20] 2024-04-27 12:22:58,596 | INFO     | --- collectZombieJob: --- 10, [1222220]
[2024-04-27 14:23:20] 2024-04-27 12:22:58,596 | INFO     | zombie collector waiting for pid 1222220
[2024-04-27 14:23:20] 2024-04-27 12:22:58,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 14:23:20] 2024-04-27 12:22:59,602 | INFO     | collected zombie processes
[2024-04-27 14:23:20] 2024-04-27 12:22:59,602 | INFO     | will now attempt to kill all subprocesses of pid=1222220
[2024-04-27 14:23:20] 2024-04-27 12:22:59,862 | INFO     | process IDs to be killed: [1222220] (in reverse order)
[2024-04-27 14:23:20] 2024-04-27 12:23:00,059 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 14:23:20] 2024-04-27 12:23:00,059 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 14:23:20] 2024-04-27 12:23:00,081 | INFO     | did not find any defunct processes belonging to 1222220
[2024-04-27 14:23:20] 2024-04-27 12:23:00,094 | INFO     | did not find any defunct processes belonging to 1222220
[2024-04-27 14:23:20] 2024-04-27 12:23:00,095 | INFO     | ready for new job
[2024-04-27 14:23:20] 2024-04-27 12:23:00,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 14:23:20] 2024-04-27 12:23:00,096 | INFO     | *************************************
[2024-04-27 14:23:20] 2024-04-27 12:23:00,096 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 14:23:20] 2024-04-27 12:23:00,097 | INFO     | *************************************
[2024-04-27 14:23:20] 2024-04-27 12:23:00,097 | INFO     | 
[2024-04-27 14:23:20] 2024-04-27 12:23:00,103 | INFO     | architecture information:
[2024-04-27 14:23:20] 2024-04-27 12:23:00,103 | INFO     | executing command: cat /etc/os-release
[2024-04-27 14:23:20] 2024-04-27 12:23:00,125 | INFO     | cat /etc/os-release:
[2024-04-27 14:23:20] NAME="CentOS Linux"
[2024-04-27 14:23:20] VERSION="7 (Core)"
[2024-04-27 14:23:20] ID="centos"
[2024-04-27 14:23:20] ID_LIKE="rhel fedora"
[2024-04-27 14:23:20] VERSION_ID="7"
[2024-04-27 14:23:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 14:23:20] ANSI_COLOR="0;31"
[2024-04-27 14:23:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 14:23:20] HOME_URL="https://www.centos.org/"
[2024-04-27 14:23:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 14:23:20] 
[2024-04-27 14:23:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 14:23:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 14:23:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 14:23:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 14:23:20] 
[2024-04-27 14:23:20] 2024-04-27 12:23:00,126 | INFO     | *************************************
[2024-04-27 14:23:20] 2024-04-27 12:23:00,629 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2024-04-27 14:23:20] 2024-04-27 12:23:00,657 | INFO     | sufficient remaining disk space (3152961077248 B)
[2024-04-27 14:23:20] 2024-04-27 12:23:00,657 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 14:23:20] 2024-04-27 12:23:00,658 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 14:23:20] 2024-04-27 12:23:00,663 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 14:23:20] 2024-04-27 12:23:00,663 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 14:23:20] 2024-04-27 12:23:00,663 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 14:23:20] 2024-04-27 12:23:00,663 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 14:23:20] 2024-04-27 12:23:00,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 14:23:20] 2024-04-27 12:23:00,732 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-04-27 14:23:20] 2024-04-27 12:23:00,732 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-04-27 14:23:20] 2024-04-27 12:23:00,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 14:23:20] 2024-04-27 12:23:00,732 | INFO     | will abort loop
[2024-04-27 14:23:20] 2024-04-27 12:23:01,668 | INFO     | [job] retrieve thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:01,687 | INFO     | all data control threads have been joined
[2024-04-27 14:23:20] 2024-04-27 12:23:01,737 | INFO     | [job] job monitor thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:01,814 | INFO     | [payload] failed_post thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:01,916 | INFO     | [job] validate thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:02,101 | INFO     | all payload control threads have been joined
[2024-04-27 14:23:20] 2024-04-27 12:23:02,179 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:02,215 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:02,298 | INFO     | all job control threads have been joined
[2024-04-27 14:23:20] 2024-04-27 12:23:02,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 14:23:20] 2024-04-27 12:23:02,588 | INFO     | [data] copytool_in thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:02,692 | INFO     | [data] control thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:02,696 | INFO     | [data] copytool_out thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:02,782 | INFO     | [payload] validate_post thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:03,088 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:03,106 | INFO     | [payload] control thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:03,303 | INFO     | [job] control thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:03,568 | INFO     | [job] queue monitor thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:03,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 14:23:20] 2024-04-27 12:23:07,668 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:11,528 | INFO     | job.realtimelogging is not enabled
[2024-04-27 14:23:20] 2024-04-27 12:23:12,534 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 14:23:20] 2024-04-27 12:23:14,032 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47131218506816)>', '<ExcThread(monitor, started 47131387639552)>']
[2024-04-27 14:23:20] 2024-04-27 12:23:14,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 14:23:20] 2024-04-27 12:23:14,727 | INFO     | [monitor] control thread has ended
[2024-04-27 14:23:20] 2024-04-27 12:23:19,057 | INFO     | all workflow threads have been joined
[2024-04-27 14:23:20] 2024-04-27 12:23:19,057 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 14:23:20] 2024-04-27 12:23:19,057 | INFO     | traces error code: 0
[2024-04-27 14:23:20] 2024-04-27 12:23:19,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 14:23:20] 2024-04-27 12:23:19,144 [wrapper] ==== pilot stdout END ====
[2024-04-27 14:23:20] 2024-04-27 12:23:19,147 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 14:23:20] 2024-04-27 12:23:19,150 [wrapper] pilotpid: 1206284
[2024-04-27 14:23:20] 2024-04-27 12:23:19,153 [wrapper] Pilot exit status: 0
[2024-04-27 14:23:20] 2024-04-27 12:23:19,170 [wrapper] pandaids: 6186149500
[2024-04-27 14:23:20] 2024-04-27 12:23:19,305 [wrapper] cleanup: SIGTERM to supervisor_pilot 2130027 1206285
[2024-04-27 14:23:20] 2024-04-27 12:23:19,308 [wrapper] Test setup, not cleaning
[2024-04-27 14:23:20] 2024-04-27 12:23:19,313 [wrapper] ==== wrapper stdout END ====
[2024-04-27 14:23:20] 2024-04-27 12:23:19,315 [wrapper] ==== wrapper stderr END ====
[2024-04-27 14:23:20] 2024-04-27 12:23:19,321 [wrapper] apfmon messages muted
[2024-04-27 14:23:20]  *** Error codes and diagnostics ***
[2024-04-27 14:23:20]     "exeErrorCode": 0,
[2024-04-27 14:23:20]     "exeErrorDiag": "",
[2024-04-27 14:23:20]     "pilotErrorCode": 0,
[2024-04-27 14:23:20]     "pilotErrorDiag": "",
[2024-04-27 14:23:20]  *** Listing of results directory ***
[2024-04-27 14:23:20] total 692540
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc    462745 Apr 25 10:34 pilot3.tar.gz
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc      6720 Apr 25 10:35 queuedata.json
[2024-04-27 14:23:20] -rwx------ 1 boinc boinc     32211 Apr 25 10:36 runpilot2-wrapper.sh
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc       100 Apr 27 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 14:23:20] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 11:46 run_atlas
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc       105 Apr 27 11:46 job.xml
[2024-04-27 14:23:20] -rw-r--r-- 2 boinc boinc     17537 Apr 27 11:46 start_atlas.sh
[2024-04-27 14:23:20] drwxrwx--x 2 boinc boinc      4096 Apr 27 11:46 shared
[2024-04-27 14:23:20] -rw-r--r-- 2 boinc boinc    474825 Apr 27 11:46 input.tar.gz
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc      6644 Apr 27 11:46 init_data.xml
[2024-04-27 14:23:20] -rw-r--r-- 2 boinc boinc 517677080 Apr 27 11:46 EVNT.38207157._000076.pool.root.1
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc         0 Apr 27 11:46 boinc_lockfile
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc      2650 Apr 27 11:46 pandaJob.out
[2024-04-27 14:23:20] -rw------- 1 boinc boinc       424 Apr 27 11:46 setup.sh.local
[2024-04-27 14:23:20] -rw------- 1 boinc boinc    997457 Apr 27 11:47 agis_schedconf.cvmfs.json
[2024-04-27 14:23:20] -rw------- 1 boinc boinc         0 Apr 27 11:47 agis_ddmendpoints.agis.ALL.json
[2024-04-27 14:23:20] -rw------- 1 boinc boinc   1315307 Apr 27 11:47 cric_ddmendpoints.json
[2024-04-27 14:23:20] drwx------ 4 boinc boinc      4096 Apr 27 11:47 pilot3
[2024-04-27 14:23:20] -rw------- 1 boinc boinc 185660616 Apr 27 14:22 HITS.38207159._001971.pool.root.1
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc       531 Apr 27 14:22 boinc_task_state.xml
[2024-04-27 14:23:20] -rw------- 1 boinc boinc      1036 Apr 27 14:22 memory_monitor_summary.json
[2024-04-27 14:23:20] -rw------- 1 boinc boinc        95 Apr 27 14:22 pilot_heartbeat.json
[2024-04-27 14:23:20] -rw------- 1 boinc boinc    285392 Apr 27 14:22 log.38207159._001971.job.log.tgz.1
[2024-04-27 14:23:20] -rw------- 1 boinc boinc      7681 Apr 27 14:22 heartbeat.json
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc      8192 Apr 27 14:23 boinc_mmap_file
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc        27 Apr 27 14:23 wrapper_checkpoint.txt
[2024-04-27 14:23:20] -rw------- 1 boinc boinc      4603 Apr 27 14:23 pilotlog.txt
[2024-04-27 14:23:20] -rw------- 1 boinc boinc    878570 Apr 27 14:23 log.38207159._001971.job.log.1
[2024-04-27 14:23:20] -rw------- 1 boinc boinc       357 Apr 27 14:23 output.list
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc       620 Apr 27 14:23 runtime_log
[2024-04-27 14:23:20] -rw------- 1 boinc boinc   1187840 Apr 27 14:23 result.tar.gz
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc     11409 Apr 27 14:23 runtime_log.err
[2024-04-27 14:23:20] -rw------- 1 boinc boinc       655 Apr 27 14:23 PlGMDmwl9J5nsSi4apGgGQJmABFKDmABFKDmRLXKDmgHSKDmaXCQYm.diag
[2024-04-27 14:23:20] -rw-r--r-- 1 boinc boinc     21596 Apr 27 14:23 stderr.txt
[2024-04-27 14:23:20] HITS file was successfully produced:
[2024-04-27 14:23:20] -rw------- 1 boinc boinc 185660616 Apr 27 14:22 shared/HITS.pool.root.1
[2024-04-27 14:23:20]  *** Contents of shared directory: ***
[2024-04-27 14:23:20] total 688512
[2024-04-27 14:23:20] -rw-r--r-- 2 boinc boinc     17537 Apr 27 11:46 start_atlas.sh
[2024-04-27 14:23:20] -rw-r--r-- 2 boinc boinc    474825 Apr 27 11:46 input.tar.gz
[2024-04-27 14:23:20] -rw-r--r-- 2 boinc boinc 517677080 Apr 27 11:46 ATLAS.root_0
[2024-04-27 14:23:20] -rw------- 1 boinc boinc 185660616 Apr 27 14:22 HITS.pool.root.1
[2024-04-27 14:23:20] -rw------- 1 boinc boinc   1187840 Apr 27 14:23 result.tar.gz
14:23:21 (1197172): run_atlas exited; CPU time 34074.850168
14:23:21 (1197172): called boinc_finish(0)

</stderr_txt>
]]>

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