Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:06:12 (2934679): wrapper (7.7.26015): starting
14:06:12 (2934679): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 14:06:12] Arguments: --nthreads 4
[2024-04-27 14:06:12] Threads: 4
[2024-04-27 14:06:12] Checking for CVMFS
[2024-04-27 14:06:12] No cvmfs_config command found, will try listing directly
[2024-04-27 14:06:12] CVMFS is ok
[2024-04-27 14:06:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 14:06:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 14:06:12] Further information can be found at the LHC@home message board.
[2024-04-27 14:06:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 14:06:12] Checking for apptainer binary...
[2024-04-27 14:06:12] which: no apptainer in ((null))
[2024-04-27 14:06:12] apptainer is not installed, using version from CVMFS
[2024-04-27 14:06:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 14:06:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-04-27 14:06:13] apptainer works
[2024-04-27 14:06:13] Set ATHENA_PROC_NUMBER=4
[2024-04-27 14:06:13] Set ATHENA_CORE_NUMBER=4
[2024-04-27 14:06:13] Starting ATLAS job with PandaID=6186575693
[2024-04-27 14:06:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 17:46:22]  *** The last 200 lines of the pilot log: ***
[2024-04-27 17:46:22]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 17:46:22]  direct_access_lan=False
[2024-04-27 17:46:22]  direct_access_wan=False
[2024-04-27 17:46:22]  domain=
[2024-04-27 17:46:22]  filesize=317077
[2024-04-27 17:46:22]  filetype=log
[2024-04-27 17:46:22]  guid=0adbba30-bd82-4a5c-80d8-5d5fad5a971b
[2024-04-27 17:46:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 17:46:22]  is_tar=False
[2024-04-27 17:46:22]  lfn=log.38203151._014378.job.log.tgz.1
[2024-04-27 17:46:22]  mtime=0
[2024-04-27 17:46:22]  protocol_id=None
[2024-04-27 17:46:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 17:46:22]  replicas=None
[2024-04-27 17:46:22]  scope=mc23_13p6TeV
[2024-04-27 17:46:22]  status=None
[2024-04-27 17:46:22]  status_code=0
[2024-04-27 17:46:22]  storage_token=
[2024-04-27 17:46:22]  surl=/scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6186575693/log.38203151._014378.job.log.tgz.1
[2024-04-27 17:46:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/5b/log.38203151._014378.job.log.tgz.1
[2024-04-27 17:46:22]  workdir=None
[2024-04-27 17:46:22] ]
[2024-04-27 17:46:22] 2024-04-27 15:45:53,945 | INFO     | transferring file log.38203151._014378.job.log.tgz.1 from /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6186575693/log.38203151._014378.job.log.tgz.1 to /scratch/b
[2024-04-27 17:46:22] 2024-04-27 15:45:53,945 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6186575693/log.38203151._014378.job.log.tgz.1 /scratch/boinc/var/slot48/slots/0/lo
[2024-04-27 17:46:22] 2024-04-27 15:45:53,962 | INFO     | adding to output.list: log.38203151._014378.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/35/5b/log.38203151._014378.job.log.tg
[2024-04-27 17:46:22] 2024-04-27 15:45:53,962 | INFO     | summary of transferred files:
[2024-04-27 17:46:22] 2024-04-27 15:45:53,962 | INFO     |  -- lfn=log.38203151._014378.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 17:46:22] 2024-04-27 15:45:53,963 | INFO     | stage-out finished correctly
[2024-04-27 17:46:22] 2024-04-27 15:45:54,912 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 17:46:22] 2024-04-27 15:45:57,668 | INFO     | job 6186575693 has state=finished
[2024-04-27 17:46:22] 2024-04-27 15:45:57,668 | INFO     | preparing for final server update for job 6186575693 in state='finished'
[2024-04-27 17:46:22] 2024-04-27 15:45:57,668 | INFO     | this job has now completed (state=finished)
[2024-04-27 17:46:22] 2024-04-27 15:45:57,669 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 17:46:22] 2024-04-27 15:45:57,669 | INFO     | job 6186575693 has finished - writing final server update
[2024-04-27 17:46:22] 2024-04-27 15:45:57,669 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2662029/.job.ad'
[2024-04-27 17:46:22] 2024-04-27 15:45:57,669 | INFO     | total number of processed events: 400 (read)
[2024-04-27 17:46:22] 2024-04-27 15:45:57,673 | INFO     | executing command: lscpu
[2024-04-27 17:46:22] 2024-04-27 15:45:57,721 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-27 17:46:22] 2024-04-27 15:45:57,721 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 17:46:22] 2024-04-27 15:45:57,758 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 17:46:22] 2024-04-27 15:46:01,479 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-27 17:46:22] 2024-04-27 15:46:01,479 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6186575693/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,485 | INFO     | extracted standard info from prmon json
[2024-04-27 17:46:22] 2024-04-27 15:46:01,485 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 17:46:22] 2024-04-27 15:46:01,486 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 17:46:22] 2024-04-27 15:46:01,486 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 17:46:22] 2024-04-27 15:46:01,490 | INFO     | fitting pss+swap vs Time
[2024-04-27 17:46:22] 2024-04-27 15:46:01,494 | INFO     | current chi2=4.2033873604952285 (change=0.009231536194004606 %)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,494 | INFO     | right removable region: 210
[2024-04-27 17:46:22] 2024-04-27 15:46:01,496 | INFO     | current chi2=1.6360720522859458 (change=61.08088840259679 %)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,498 | INFO     | current chi2=0.0649846460087998 (change=96.028008306969 %)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,499 | INFO     | current chi2=0.0007634662907699662 (change=98.82515896036952 %)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,501 | INFO     | current chi2=0.0004038142154869741 (change=47.1077871585238 %)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,502 | INFO     | current chi2=0.0003009558984564233 (change=25.471692943377498 %)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,504 | INFO     | current chi2=0.0002974277124471426 (change=1.1723265858474534 %)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,504 | INFO     | left removable region: 60
[2024-04-27 17:46:22] 2024-04-27 15:46:01,505 | INFO     | current memory leak: 1.19 B/s (using 150 data points, chi2=0.00)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,506 | INFO     | ..............................
[2024-04-27 17:46:22] 2024-04-27 15:46:01,506 | INFO     | . Timing measurements:
[2024-04-27 17:46:22] 2024-04-27 15:46:01,506 | INFO     | . get job = 0 s
[2024-04-27 17:46:22] 2024-04-27 15:46:01,506 | INFO     | . initial setup = 1 s
[2024-04-27 17:46:22] 2024-04-27 15:46:01,506 | INFO     | . payload setup = 4 s
[2024-04-27 17:46:22] 2024-04-27 15:46:01,506 | INFO     | . stage-in = 0 s
[2024-04-27 17:46:22] 2024-04-27 15:46:01,506 | INFO     | . payload execution = 13149 s
[2024-04-27 17:46:22] 2024-04-27 15:46:01,506 | INFO     | . stage-out = 0 s
[2024-04-27 17:46:22] 2024-04-27 15:46:01,506 | INFO     | . log creation = 0 s
[2024-04-27 17:46:22] 2024-04-27 15:46:01,507 | INFO     | ..............................
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | 
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | job summary report
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | --------------------------------------------------
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | PanDA job id: 6186575693
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | task id: 38203151
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | errors: (none)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | pilot state: finished 
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | transexitcode: 0
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | exeerrorcode: 0
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | exeerrordiag: 
[2024-04-27 17:46:22] 2024-04-27 15:46:01,601 | INFO     | exitcode: 0
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | exitmsg: OK
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | cpuconsumptiontime: 49646 s
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | nevents: 400
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | neventsw: 0
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | pid: 2946089
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | pgrp: 2946089
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | corecount: 4
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | event service: False
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | sizes: {0: 2375471, 1: 2375670, 4: 2375876, 11: 2375904, 13158: 2405948, 13159: 2414930, 13160: 2415114, 13167: 2415284}
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | --------------------------------------------------
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | 
[2024-04-27 17:46:22] 2024-04-27 15:46:01,602 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2024-04-27 17:46:22] 2024-04-27 15:46:01,667 | WARNING  | process 2946089 is no longer using CPU - aborting
[2024-04-27 17:46:22] 2024-04-27 15:46:01,667 | INFO     | aborting job monitoring since job object (job id=6186575693) has expired
[2024-04-27 17:46:22] 2024-04-27 15:46:01,685 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,685 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,685 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,685 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,685 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | job 6186575693 has completed (purged errors)
[2024-04-27 17:46:22] 2024-04-27 15:46:01,686 | INFO     | overall cleanup function is called
[2024-04-27 17:46:22] 2024-04-27 15:46:02,691 | INFO     | --- collectZombieJob: --- 10, [2946089]
[2024-04-27 17:46:22] 2024-04-27 15:46:02,691 | INFO     | zombie collector waiting for pid 2946089
[2024-04-27 17:46:22] 2024-04-27 15:46:02,691 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 17:46:22] 2024-04-27 15:46:03,696 | INFO     | collected zombie processes
[2024-04-27 17:46:22] 2024-04-27 15:46:03,696 | INFO     | will now attempt to kill all subprocesses of pid=2946089
[2024-04-27 17:46:22] 2024-04-27 15:46:03,873 | INFO     | process IDs to be killed: [2946089] (in reverse order)
[2024-04-27 17:46:22] 2024-04-27 15:46:03,972 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 17:46:22] 2024-04-27 15:46:03,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 17:46:22] 2024-04-27 15:46:03,979 | INFO     | did not find any defunct processes belonging to 2946089
[2024-04-27 17:46:22] 2024-04-27 15:46:03,984 | INFO     | did not find any defunct processes belonging to 2946089
[2024-04-27 17:46:22] 2024-04-27 15:46:03,985 | INFO     | ready for new job
[2024-04-27 17:46:22] 2024-04-27 15:46:03,985 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 17:46:22] 2024-04-27 15:46:03,986 | INFO     | *************************************
[2024-04-27 17:46:22] 2024-04-27 15:46:03,986 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 17:46:22] 2024-04-27 15:46:03,986 | INFO     | *************************************
[2024-04-27 17:46:22] 2024-04-27 15:46:03,986 | INFO     | 
[2024-04-27 17:46:22] 2024-04-27 15:46:03,989 | INFO     | architecture information:
[2024-04-27 17:46:22] 2024-04-27 15:46:03,989 | INFO     | executing command: cat /etc/os-release
[2024-04-27 17:46:22] 2024-04-27 15:46:04,004 | INFO     | cat /etc/os-release:
[2024-04-27 17:46:22] NAME="CentOS Linux"
[2024-04-27 17:46:22] VERSION="7 (Core)"
[2024-04-27 17:46:22] ID="centos"
[2024-04-27 17:46:22] ID_LIKE="rhel fedora"
[2024-04-27 17:46:22] VERSION_ID="7"
[2024-04-27 17:46:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 17:46:22] ANSI_COLOR="0;31"
[2024-04-27 17:46:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 17:46:22] HOME_URL="https://www.centos.org/"
[2024-04-27 17:46:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 17:46:22] 
[2024-04-27 17:46:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 17:46:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 17:46:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 17:46:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 17:46:22] 
[2024-04-27 17:46:22] 2024-04-27 15:46:04,004 | INFO     | *************************************
[2024-04-27 17:46:22] 2024-04-27 15:46:04,507 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2024-04-27 17:46:22] 2024-04-27 15:46:04,530 | INFO     | sufficient remaining disk space (599102849024 B)
[2024-04-27 17:46:22] 2024-04-27 15:46:04,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 17:46:22] 2024-04-27 15:46:04,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 17:46:22] 2024-04-27 15:46:04,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 17:46:22] 2024-04-27 15:46:04,773 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 17:46:22] 2024-04-27 15:46:04,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 17:46:22] 2024-04-27 15:46:04,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 17:46:22] 2024-04-27 15:46:04,841 | INFO     | all data control threads have been joined
[2024-04-27 17:46:22] 2024-04-27 15:46:05,175 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 17:46:22] 2024-04-27 15:46:05,175 | INFO     | aborting loop
[2024-04-27 17:46:22] 2024-04-27 15:46:05,329 | INFO     | all job control threads have been joined
[2024-04-27 17:46:22] 2024-04-27 15:46:05,495 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 17:46:22] 2024-04-27 15:46:05,536 | INFO     | [job] retrieve thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:05,719 | INFO     | [data] copytool_in thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:05,846 | INFO     | [data] control thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:06,020 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:06,029 | INFO     | all payload control threads have been joined
[2024-04-27 17:46:22] 2024-04-27 15:46:06,180 | INFO     | [job] job monitor thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:06,334 | INFO     | [job] control thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:06,396 | INFO     | [job] validate thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:06,538 | INFO     | [data] copytool_out thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:06,611 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 17:46:22] 2024-04-27 15:46:06,892 | INFO     | [payload] validate_post thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:06,964 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:06,979 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:07,034 | INFO     | [payload] control thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:07,110 | INFO     | [payload] failed_post thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:07,616 | INFO     | [job] queue monitor thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:09,501 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:14,981 | INFO     | job.realtimelogging is not enabled
[2024-04-27 17:46:22] 2024-04-27 15:46:15,986 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 17:46:22] 2024-04-27 15:46:16,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47518014846016)>', '<ExcThread(monitor, started 47518452823808)>']
[2024-04-27 17:46:22] 2024-04-27 15:46:16,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 17:46:22] 2024-04-27 15:46:16,829 | INFO     | [monitor] control thread has ended
[2024-04-27 17:46:22] 2024-04-27 15:46:21,615 | INFO     | all workflow threads have been joined
[2024-04-27 17:46:22] 2024-04-27 15:46:21,615 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 17:46:22] 2024-04-27 15:46:21,615 | INFO     | traces error code: 0
[2024-04-27 17:46:22] 2024-04-27 15:46:21,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 17:46:22] 2024-04-27 15:46:21,694 [wrapper] ==== pilot stdout END ====
[2024-04-27 17:46:22] 2024-04-27 15:46:21,696 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 17:46:22] 2024-04-27 15:46:21,698 [wrapper] pilotpid: 2939035
[2024-04-27 17:46:22] 2024-04-27 15:46:21,700 [wrapper] Pilot exit status: 0
[2024-04-27 17:46:22] 2024-04-27 15:46:21,707 [wrapper] pandaids: 6186575693
[2024-04-27 17:46:22] 2024-04-27 15:46:21,773 [wrapper] cleanup: SIGTERM to supervisor_pilot 3607534 2939036
[2024-04-27 17:46:22] 2024-04-27 15:46:21,775 [wrapper] Test setup, not cleaning
[2024-04-27 17:46:22] 2024-04-27 15:46:21,777 [wrapper] ==== wrapper stdout END ====
[2024-04-27 17:46:22] 2024-04-27 15:46:21,779 [wrapper] ==== wrapper stderr END ====
[2024-04-27 17:46:22] 2024-04-27 15:46:21,783 [wrapper] apfmon messages muted
[2024-04-27 17:46:22]  *** Error codes and diagnostics ***
[2024-04-27 17:46:22]     "exeErrorCode": 0,
[2024-04-27 17:46:22]     "exeErrorDiag": "",
[2024-04-27 17:46:22]     "pilotErrorCode": 0,
[2024-04-27 17:46:22]     "pilotErrorDiag": "",
[2024-04-27 17:46:22]  *** Listing of results directory ***
[2024-04-27 17:46:22] total 722100
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc    462745 Apr 25 17:28 pilot3.tar.gz
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc      6173 Apr 25 17:36 queuedata.json
[2024-04-27 17:46:22] -rwx------ 1 boinc boinc     32211 Apr 25 17:36 runpilot2-wrapper.sh
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc       100 Apr 27 14:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 17:46:22] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 14:06 run_atlas
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc       105 Apr 27 14:06 job.xml
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc      6663 Apr 27 14:06 init_data.xml
[2024-04-27 17:46:22] -rw-r--r-- 2 boinc boinc 517263328 Apr 27 14:06 EVNT.38203149._000392.pool.root.1
[2024-04-27 17:46:22] -rw-r--r-- 2 boinc boinc     17537 Apr 27 14:06 start_atlas.sh
[2024-04-27 17:46:22] drwxrwx--x 2 boinc boinc      4096 Apr 27 14:06 shared
[2024-04-27 17:46:22] -rw-r--r-- 2 boinc boinc    474768 Apr 27 14:06 input.tar.gz
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc         0 Apr 27 14:06 boinc_lockfile
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc      2553 Apr 27 14:06 pandaJob.out
[2024-04-27 17:46:22] -rw------- 1 boinc boinc       424 Apr 27 14:06 setup.sh.local
[2024-04-27 17:46:22] -rw------- 1 boinc boinc    997454 Apr 27 14:06 agis_schedconf.cvmfs.json
[2024-04-27 17:46:22] -rw------- 1 boinc boinc   1315307 Apr 27 14:06 cric_ddmendpoints.json
[2024-04-27 17:46:22] drwx------ 4 boinc boinc      4096 Apr 27 14:06 pilot3
[2024-04-27 17:46:22] -rw------- 1 boinc boinc 215561814 Apr 27 17:45 HITS.38203151._014378.pool.root.1
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc       531 Apr 27 17:45 boinc_task_state.xml
[2024-04-27 17:46:22] -rw------- 1 boinc boinc      1051 Apr 27 17:45 memory_monitor_summary.json
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc      8192 Apr 27 17:45 boinc_mmap_file
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc        28 Apr 27 17:45 wrapper_checkpoint.txt
[2024-04-27 17:46:22] -rw------- 1 boinc boinc         0 Apr 27 17:45 agis_ddmendpoints.agis.ALL.json
[2024-04-27 17:46:22] -rw------- 1 boinc boinc    317077 Apr 27 17:45 log.38203151._014378.job.log.tgz.1
[2024-04-27 17:46:22] -rw------- 1 boinc boinc        95 Apr 27 17:45 pilot_heartbeat.json
[2024-04-27 17:46:22] -rw------- 1 boinc boinc      7739 Apr 27 17:46 heartbeat.json
[2024-04-27 17:46:22] -rw------- 1 boinc boinc      4293 Apr 27 17:46 pilotlog.txt
[2024-04-27 17:46:22] -rw------- 1 boinc boinc   1244205 Apr 27 17:46 log.38203151._014378.job.log.1
[2024-04-27 17:46:22] -rw------- 1 boinc boinc       357 Apr 27 17:46 output.list
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc       620 Apr 27 17:46 runtime_log
[2024-04-27 17:46:22] -rw------- 1 boinc boinc   1576960 Apr 27 17:46 result.tar.gz
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc     11410 Apr 27 17:46 runtime_log.err
[2024-04-27 17:46:22] -rw------- 1 boinc boinc       657 Apr 27 17:46 j6lKDmlKGK5n9Rq4apoT9bVoABFKDmABFKDmtztZDmaaOKDmzmEcAn.diag
[2024-04-27 17:46:22] -rw-r--r-- 1 boinc boinc     20948 Apr 27 17:46 stderr.txt
[2024-04-27 17:46:22] HITS file was successfully produced:
[2024-04-27 17:46:22] -rw------- 1 boinc boinc 215561814 Apr 27 17:45 shared/HITS.pool.root.1
[2024-04-27 17:46:22]  *** Contents of shared directory: ***
[2024-04-27 17:46:22] total 717684
[2024-04-27 17:46:22] -rw-r--r-- 2 boinc boinc 517263328 Apr 27 14:06 ATLAS.root_0
[2024-04-27 17:46:22] -rw-r--r-- 2 boinc boinc     17537 Apr 27 14:06 start_atlas.sh
[2024-04-27 17:46:22] -rw-r--r-- 2 boinc boinc    474768 Apr 27 14:06 input.tar.gz
[2024-04-27 17:46:22] -rw------- 1 boinc boinc 215561814 Apr 27 17:45 HITS.pool.root.1
[2024-04-27 17:46:22] -rw------- 1 boinc boinc   1576960 Apr 27 17:46 result.tar.gz
17:46:24 (2934679): run_atlas exited; CPU time 49371.252114
17:46:24 (2934679): called boinc_finish(0)

</stderr_txt>
]]>

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