Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:42:56 (3593475): wrapper (7.7.26015): starting
02:42:56 (3593475): wrapper: running run_atlas (--nthreads 4)
[2024-04-28 02:42:56] Arguments: --nthreads 4
[2024-04-28 02:42:56] Threads: 4
[2024-04-28 02:42:56] Checking for CVMFS
[2024-04-28 02:42:56] No cvmfs_config command found, will try listing directly
[2024-04-28 02:42:56] CVMFS is ok
[2024-04-28 02:42:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-28 02:42:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-28 02:42:56] Further information can be found at the LHC@home message board.
[2024-04-28 02:42:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-28 02:42:56] Checking for apptainer binary...
[2024-04-28 02:42:56] which: no apptainer in ((null))
[2024-04-28 02:42:56] apptainer is not installed, using version from CVMFS
[2024-04-28 02:42:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-28 02:42:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2024-04-28 02:42:57] apptainer works
[2024-04-28 02:42:57] Set ATHENA_PROC_NUMBER=4
[2024-04-28 02:42:57] Set ATHENA_CORE_NUMBER=4
[2024-04-28 02:42:57] Starting ATLAS job with PandaID=6186287125
[2024-04-28 02:42:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-28 08:42:14]  *** The last 200 lines of the pilot log: ***
[2024-04-28 08:42:14]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-28 08:42:14]  direct_access_lan=False
[2024-04-28 08:42:14]  direct_access_wan=False
[2024-04-28 08:42:14]  domain=
[2024-04-28 08:42:14]  filesize=381753
[2024-04-28 08:42:14]  filetype=log
[2024-04-28 08:42:14]  guid=657e3f05-6d5f-47fd-a1a1-0980f4768adc
[2024-04-28 08:42:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-28 08:42:14]  is_tar=False
[2024-04-28 08:42:14]  lfn=log.38221879._000026.job.log.tgz.1
[2024-04-28 08:42:14]  mtime=0
[2024-04-28 08:42:14]  protocol_id=None
[2024-04-28 08:42:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-28 08:42:14]  replicas=None
[2024-04-28 08:42:14]  scope=mc23_13p6TeV
[2024-04-28 08:42:14]  status=None
[2024-04-28 08:42:14]  status_code=0
[2024-04-28 08:42:14]  storage_token=
[2024-04-28 08:42:14]  surl=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6186287125/log.38221879._000026.job.log.tgz.1
[2024-04-28 08:42:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/5b/log.38221879._000026.job.log.tgz.1
[2024-04-28 08:42:14]  workdir=None
[2024-04-28 08:42:14] ]
[2024-04-28 08:42:14] 2024-04-28 06:41:49,990 | INFO     | transferring file log.38221879._000026.job.log.tgz.1 from /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6186287125/log.38221879._000026.job.log.tgz.1 to /scratch/b
[2024-04-28 08:42:14] 2024-04-28 06:41:49,990 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6186287125/log.38221879._000026.job.log.tgz.1 /scratch/boinc/var/slot40/slots/0/lo
[2024-04-28 08:42:14] 2024-04-28 06:41:50,007 | INFO     | adding to output.list: log.38221879._000026.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/5b/log.38221879._000026.job.log.tg
[2024-04-28 08:42:14] 2024-04-28 06:41:50,007 | INFO     | summary of transferred files:
[2024-04-28 08:42:14] 2024-04-28 06:41:50,007 | INFO     |  -- lfn=log.38221879._000026.job.log.tgz.1, status_code=0, status=transferred
[2024-04-28 08:42:14] 2024-04-28 06:41:50,008 | INFO     | stage-out finished correctly
[2024-04-28 08:42:14] 2024-04-28 06:41:53,041 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-28 08:42:14] 2024-04-28 06:41:55,318 | WARNING  | process 3605039 is no longer using CPU - aborting
[2024-04-28 08:42:14] 2024-04-28 06:41:55,318 | INFO     | will not send any job update
[2024-04-28 08:42:14] 2024-04-28 06:41:55,863 | INFO     | job 6186287125 has state=finished
[2024-04-28 08:42:14] 2024-04-28 06:41:55,864 | INFO     | preparing for final server update for job 6186287125 in state='finished'
[2024-04-28 08:42:14] 2024-04-28 06:41:55,864 | INFO     | this job has now completed (state=finished)
[2024-04-28 08:42:14] 2024-04-28 06:41:55,865 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-28 08:42:14] 2024-04-28 06:41:55,865 | INFO     | job 6186287125 has finished - writing final server update
[2024-04-28 08:42:14] 2024-04-28 06:41:55,865 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_97867/.job.ad'
[2024-04-28 08:42:14] 2024-04-28 06:41:55,865 | INFO     | total number of processed events: 400 (read)
[2024-04-28 08:42:14] 2024-04-28 06:41:55,868 | INFO     | executing command: lscpu
[2024-04-28 08:42:14] 2024-04-28 06:41:55,904 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-28 08:42:14] 2024-04-28 06:41:55,905 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-28 08:42:14] 2024-04-28 06:41:55,954 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-28 08:42:14] 2024-04-28 06:41:57,822 | INFO     | monitor loop #1636: job 0:6186287125 is in state 'finished'
[2024-04-28 08:42:14] 2024-04-28 06:41:57,823 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 08:42:14] 2024-04-28 06:42:00,325 | INFO     | monitor loop #1637: job 0:6186287125 is in state 'finished'
[2024-04-28 08:42:14] 2024-04-28 06:42:00,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 08:42:14] 2024-04-28 06:42:00,351 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-28 08:42:14] 2024-04-28 06:42:00,351 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6186287125/memory_monitor_summary.json (trf name=prmon)
[2024-04-28 08:42:14] 2024-04-28 06:42:00,352 | INFO     | extracted standard info from prmon json
[2024-04-28 08:42:14] 2024-04-28 06:42:00,353 | INFO     | extracted standard memory fields from prmon json
[2024-04-28 08:42:14] 2024-04-28 06:42:00,353 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-28 08:42:14] 2024-04-28 06:42:00,353 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-28 08:42:14] 2024-04-28 06:42:00,360 | INFO     | fitting pss+swap vs Time
[2024-04-28 08:42:14] 2024-04-28 06:42:00,369 | INFO     | current chi2=3.2764609116559678 (change=18.62706581644389 %)
[2024-04-28 08:42:14] 2024-04-28 06:42:00,369 | INFO     | right removable region: 347
[2024-04-28 08:42:14] 2024-04-28 06:42:00,373 | INFO     | current chi2=1.890757990277753 (change=53.04185532854617 %)
[2024-04-28 08:42:14] 2024-04-28 06:42:00,377 | INFO     | current chi2=0.8306459869418503 (change=56.06809590582091 %)
[2024-04-28 08:42:14] 2024-04-28 06:42:00,381 | INFO     | current chi2=0.7986455949465986 (change=3.8524705468169476 %)
[2024-04-28 08:42:14] 2024-04-28 06:42:00,381 | INFO     | left removable region: 30
[2024-04-28 08:42:14] 2024-04-28 06:42:00,384 | INFO     | current memory leak: 1.11 B/s (using 317 data points, chi2=0.00)
[2024-04-28 08:42:14] 2024-04-28 06:42:00,385 | INFO     | ..............................
[2024-04-28 08:42:14] 2024-04-28 06:42:00,385 | INFO     | . Timing measurements:
[2024-04-28 08:42:14] 2024-04-28 06:42:00,385 | INFO     | . get job = 0 s
[2024-04-28 08:42:14] 2024-04-28 06:42:00,385 | INFO     | . initial setup = 1 s
[2024-04-28 08:42:14] 2024-04-28 06:42:00,385 | INFO     | . payload setup = 5 s
[2024-04-28 08:42:14] 2024-04-28 06:42:00,386 | INFO     | . stage-in = 0 s
[2024-04-28 08:42:14] 2024-04-28 06:42:00,386 | INFO     | . payload execution = 21497 s
[2024-04-28 08:42:14] 2024-04-28 06:42:00,386 | INFO     | . stage-out = 0 s
[2024-04-28 08:42:14] 2024-04-28 06:42:00,386 | INFO     | . log creation = 0 s
[2024-04-28 08:42:14] 2024-04-28 06:42:00,386 | INFO     | ..............................
[2024-04-28 08:42:14] 2024-04-28 06:42:00,548 | INFO     | 
[2024-04-28 08:42:14] 2024-04-28 06:42:00,548 | INFO     | job summary report
[2024-04-28 08:42:14] 2024-04-28 06:42:00,548 | INFO     | --------------------------------------------------
[2024-04-28 08:42:14] 2024-04-28 06:42:00,549 | INFO     | PanDA job id: 6186287125
[2024-04-28 08:42:14] 2024-04-28 06:42:00,549 | INFO     | task id: 38221879
[2024-04-28 08:42:14] 2024-04-28 06:42:00,549 | INFO     | errors: (none)
[2024-04-28 08:42:14] 2024-04-28 06:42:00,549 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-28 08:42:14] 2024-04-28 06:42:00,549 | INFO     | pilot state: finished 
[2024-04-28 08:42:14] 2024-04-28 06:42:00,549 | INFO     | transexitcode: 0
[2024-04-28 08:42:14] 2024-04-28 06:42:00,549 | INFO     | exeerrorcode: 0
[2024-04-28 08:42:14] 2024-04-28 06:42:00,549 | INFO     | exeerrordiag: 
[2024-04-28 08:42:14] 2024-04-28 06:42:00,550 | INFO     | exitcode: 0
[2024-04-28 08:42:14] 2024-04-28 06:42:00,550 | INFO     | exitmsg: OK
[2024-04-28 08:42:14] 2024-04-28 06:42:00,550 | INFO     | cpuconsumptiontime: 82504 s
[2024-04-28 08:42:14] 2024-04-28 06:42:00,550 | INFO     | nevents: 400
[2024-04-28 08:42:14] 2024-04-28 06:42:00,550 | INFO     | neventsw: 0
[2024-04-28 08:42:14] 2024-04-28 06:42:00,550 | INFO     | pid: 3605039
[2024-04-28 08:42:14] 2024-04-28 06:42:00,550 | INFO     | pgrp: 3605039
[2024-04-28 08:42:14] 2024-04-28 06:42:00,550 | INFO     | corecount: 4
[2024-04-28 08:42:14] 2024-04-28 06:42:00,551 | INFO     | event service: False
[2024-04-28 08:42:14] 2024-04-28 06:42:00,551 | INFO     | sizes: {0: 2375618, 5: 2375824, 11: 2375880, 21506: 2409951, 21507: 2418933, 21510: 2418989, 21518: 2419287}
[2024-04-28 08:42:14] 2024-04-28 06:42:00,551 | INFO     | --------------------------------------------------
[2024-04-28 08:42:14] 2024-04-28 06:42:00,551 | INFO     | 
[2024-04-28 08:42:14] 2024-04-28 06:42:00,551 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-04-28 08:42:14] 2024-04-28 06:42:00,570 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,570 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,570 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,570 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-28 08:42:14] 2024-04-28 06:42:00,571 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,572 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-28 08:42:14] 2024-04-28 06:42:00,572 | INFO     | job 6186287125 has completed (purged errors)
[2024-04-28 08:42:14] 2024-04-28 06:42:00,572 | INFO     | overall cleanup function is called
[2024-04-28 08:42:14] 2024-04-28 06:42:01,578 | INFO     | --- collectZombieJob: --- 10, [3605039]
[2024-04-28 08:42:14] 2024-04-28 06:42:01,579 | INFO     | zombie collector waiting for pid 3605039
[2024-04-28 08:42:14] 2024-04-28 06:42:01,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-28 08:42:14] 2024-04-28 06:42:02,583 | INFO     | collected zombie processes
[2024-04-28 08:42:14] 2024-04-28 06:42:02,584 | INFO     | will now attempt to kill all subprocesses of pid=3605039
[2024-04-28 08:42:14] 2024-04-28 06:42:02,696 | INFO     | process IDs to be killed: [3605039] (in reverse order)
[2024-04-28 08:42:14] 2024-04-28 06:42:02,783 | WARNING  | found no corresponding commands to process id(s)
[2024-04-28 08:42:14] 2024-04-28 06:42:02,784 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-28 08:42:14] 2024-04-28 06:42:02,788 | INFO     | did not find any defunct processes belonging to 3605039
[2024-04-28 08:42:14] 2024-04-28 06:42:02,791 | INFO     | did not find any defunct processes belonging to 3605039
[2024-04-28 08:42:14] 2024-04-28 06:42:02,791 | INFO     | ready for new job
[2024-04-28 08:42:14] 2024-04-28 06:42:02,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-28 08:42:14] 2024-04-28 06:42:02,793 | INFO     | *************************************
[2024-04-28 08:42:14] 2024-04-28 06:42:02,793 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-28 08:42:14] 2024-04-28 06:42:02,793 | INFO     | *************************************
[2024-04-28 08:42:14] 2024-04-28 06:42:02,793 | INFO     | 
[2024-04-28 08:42:14] 2024-04-28 06:42:02,795 | INFO     | architecture information:
[2024-04-28 08:42:14] 2024-04-28 06:42:02,795 | INFO     | executing command: cat /etc/os-release
[2024-04-28 08:42:14] 2024-04-28 06:42:02,808 | INFO     | cat /etc/os-release:
[2024-04-28 08:42:14] NAME="CentOS Linux"
[2024-04-28 08:42:14] VERSION="7 (Core)"
[2024-04-28 08:42:14] ID="centos"
[2024-04-28 08:42:14] ID_LIKE="rhel fedora"
[2024-04-28 08:42:14] VERSION_ID="7"
[2024-04-28 08:42:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-28 08:42:14] ANSI_COLOR="0;31"
[2024-04-28 08:42:14] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-28 08:42:14] HOME_URL="https://www.centos.org/"
[2024-04-28 08:42:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-28 08:42:14] 
[2024-04-28 08:42:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-28 08:42:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-28 08:42:14] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-28 08:42:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-28 08:42:14] 
[2024-04-28 08:42:14] 2024-04-28 06:42:02,808 | INFO     | *************************************
[2024-04-28 08:42:14] 2024-04-28 06:42:03,311 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-04-28 08:42:14] 2024-04-28 06:42:03,328 | INFO     | sufficient remaining disk space (1629884514304 B)
[2024-04-28 08:42:14] 2024-04-28 06:42:03,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-28 08:42:14] 2024-04-28 06:42:03,329 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-28 08:42:14] 2024-04-28 06:42:03,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-28 08:42:14] 2024-04-28 06:42:03,451 | INFO     | all job control threads have been joined
[2024-04-28 08:42:14] 2024-04-28 06:42:03,504 | INFO     | all data control threads have been joined
[2024-04-28 08:42:14] 2024-04-28 06:42:03,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-28 08:42:14] 2024-04-28 06:42:03,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-28 08:42:14] 2024-04-28 06:42:03,835 | INFO     | aborting loop
[2024-04-28 08:42:14] 2024-04-28 06:42:03,903 | INFO     | found 0 job(s) in 20 queues
[2024-04-28 08:42:14] 2024-04-28 06:42:03,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-28 08:42:14] 2024-04-28 06:42:03,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-28 08:42:14] 2024-04-28 06:42:03,937 | INFO     | all payload control threads have been joined
[2024-04-28 08:42:14] 2024-04-28 06:42:04,334 | INFO     | [job] retrieve thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:04,456 | INFO     | [job] control thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:04,508 | INFO     | [data] control thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:04,704 | INFO     | [job] validate thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:04,737 | INFO     | [payload] execute_payloads thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:04,793 | INFO     | [payload] failed_post thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:04,839 | INFO     | [job] job monitor thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:04,861 | INFO     | [job] create_data_payload thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:04,942 | INFO     | [payload] control thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:05,010 | INFO     | [data] copytool_in thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:05,334 | INFO     | [data] copytool_out thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:05,378 | INFO     | [payload] validate_pre thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:05,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-28 08:42:14] 2024-04-28 06:42:05,715 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:05,800 | INFO     | [payload] validate_post thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:06,504 | INFO     | [job] queue monitor thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:07,652 | INFO     | [data] queue_monitor thread has finished
[2024-04-28 08:42:14] 2024-04-28 06:42:08,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47739772896320)>', '<ExcThread(monitor, started 47739960940288)>']
[2024-04-28 08:42:14] 2024-04-28 06:42:08,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-28 08:42:14] 2024-04-28 06:42:08,930 | INFO     | [monitor] control thread has ended
[2024-04-28 08:42:14] 2024-04-28 06:42:13,182 | INFO     | all workflow threads have been joined
[2024-04-28 08:42:14] 2024-04-28 06:42:13,183 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-28 08:42:14] 2024-04-28 06:42:13,183 | INFO     | traces error code: 0
[2024-04-28 08:42:14] 2024-04-28 06:42:13,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-28 08:42:14] 2024-04-28 06:42:13,253 [wrapper] ==== pilot stdout END ====
[2024-04-28 08:42:14] 2024-04-28 06:42:13,255 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-28 08:42:14] 2024-04-28 06:42:13,258 [wrapper] pilotpid: 3598192
[2024-04-28 08:42:14] 2024-04-28 06:42:13,260 [wrapper] Pilot exit status: 0
[2024-04-28 08:42:14] 2024-04-28 06:42:13,269 [wrapper] pandaids: 6186287125
[2024-04-28 08:42:14] 2024-04-28 06:42:13,328 [wrapper] cleanup: SIGTERM to supervisor_pilot   16273 3598193
[2024-04-28 08:42:14] 2024-04-28 06:42:13,330 [wrapper] Test setup, not cleaning
[2024-04-28 08:42:14] 2024-04-28 06:42:13,332 [wrapper] ==== wrapper stdout END ====
[2024-04-28 08:42:14] 2024-04-28 06:42:13,334 [wrapper] ==== wrapper stderr END ====
[2024-04-28 08:42:14] 2024-04-28 06:42:13,337 [wrapper] apfmon messages muted
[2024-04-28 08:42:14]  *** Error codes and diagnostics ***
[2024-04-28 08:42:14]     "exeErrorCode": 0,
[2024-04-28 08:42:14]     "exeErrorDiag": "",
[2024-04-28 08:42:14]     "pilotErrorCode": 0,
[2024-04-28 08:42:14]     "pilotErrorDiag": "",
[2024-04-28 08:42:14]  *** Listing of results directory ***
[2024-04-28 08:42:14] total 838232
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc    462745 Apr 25 12:36 pilot3.tar.gz
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc      6173 Apr 25 12:39 queuedata.json
[2024-04-28 08:42:14] -rwx------ 1 boinc boinc     32211 Apr 25 12:40 runpilot2-wrapper.sh
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc       100 Apr 28 02:42 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-28 08:42:14] -rwxr-xr-x 1 boinc boinc      7986 Apr 28 02:42 run_atlas
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc       105 Apr 28 02:42 job.xml
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc      6455 Apr 28 02:42 init_data.xml
[2024-04-28 08:42:14] -rw-r--r-- 2 boinc boinc 579099478 Apr 28 02:42 EVNT.38221877._000001.pool.root.1
[2024-04-28 08:42:14] -rw-r--r-- 2 boinc boinc     17537 Apr 28 02:42 start_atlas.sh
[2024-04-28 08:42:14] drwxrwx--x 2 boinc boinc      4096 Apr 28 02:42 shared
[2024-04-28 08:42:14] -rw-r--r-- 2 boinc boinc    474769 Apr 28 02:42 input.tar.gz
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc         0 Apr 28 02:42 boinc_lockfile
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc      2578 Apr 28 02:42 pandaJob.out
[2024-04-28 08:42:14] -rw------- 1 boinc boinc       424 Apr 28 02:42 setup.sh.local
[2024-04-28 08:42:14] -rw------- 1 boinc boinc    997154 Apr 28 02:43 agis_schedconf.cvmfs.json
[2024-04-28 08:42:14] -rw------- 1 boinc boinc   1315307 Apr 28 02:43 cric_ddmendpoints.json
[2024-04-28 08:42:14] drwx------ 4 boinc boinc      4096 Apr 28 02:43 pilot3
[2024-04-28 08:42:14] -rw------- 1 boinc boinc 271025092 Apr 28 08:41 HITS.38221879._000026.pool.root.1
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc       532 Apr 28 08:41 boinc_task_state.xml
[2024-04-28 08:42:14] -rw------- 1 boinc boinc        95 Apr 28 08:41 pilot_heartbeat.json
[2024-04-28 08:42:14] -rw------- 1 boinc boinc      1048 Apr 28 08:41 memory_monitor_summary.json
[2024-04-28 08:42:14] -rw------- 1 boinc boinc         0 Apr 28 08:41 agis_ddmendpoints.agis.ALL.json
[2024-04-28 08:42:14] -rw------- 1 boinc boinc    381753 Apr 28 08:41 log.38221879._000026.job.log.tgz.1
[2024-04-28 08:42:14] -rw------- 1 boinc boinc      7724 Apr 28 08:42 heartbeat.json
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc      8192 Apr 28 08:42 boinc_mmap_file
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc        28 Apr 28 08:42 wrapper_checkpoint.txt
[2024-04-28 08:42:14] -rw------- 1 boinc boinc      4222 Apr 28 08:42 pilotlog.txt
[2024-04-28 08:42:14] -rw------- 1 boinc boinc   1985556 Apr 28 08:42 log.38221879._000026.job.log.1
[2024-04-28 08:42:14] -rw------- 1 boinc boinc       357 Apr 28 08:42 output.list
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc       620 Apr 28 08:42 runtime_log
[2024-04-28 08:42:14] -rw------- 1 boinc boinc   2385920 Apr 28 08:42 result.tar.gz
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc     11410 Apr 28 08:42 runtime_log.err
[2024-04-28 08:42:14] -rw------- 1 boinc boinc       659 Apr 28 08:42 F6KMDmPhBK5n9Rq4apoT9bVoABFKDmABFKDmtztZDmYDOKDmwv8B8m.diag
[2024-04-28 08:42:14] -rw-r--r-- 1 boinc boinc     20939 Apr 28 08:42 stderr.txt
[2024-04-28 08:42:14] HITS file was successfully produced:
[2024-04-28 08:42:14] -rw------- 1 boinc boinc 271025092 Apr 28 08:41 shared/HITS.pool.root.1
[2024-04-28 08:42:14]  *** Contents of shared directory: ***
[2024-04-28 08:42:14] total 833028
[2024-04-28 08:42:14] -rw-r--r-- 2 boinc boinc 579099478 Apr 28 02:42 ATLAS.root_0
[2024-04-28 08:42:14] -rw-r--r-- 2 boinc boinc     17537 Apr 28 02:42 start_atlas.sh
[2024-04-28 08:42:14] -rw-r--r-- 2 boinc boinc    474769 Apr 28 02:42 input.tar.gz
[2024-04-28 08:42:14] -rw------- 1 boinc boinc 271025092 Apr 28 08:41 HITS.pool.root.1
[2024-04-28 08:42:14] -rw------- 1 boinc boinc   2385920 Apr 28 08:42 result.tar.gz
08:42:15 (3593475): run_atlas exited; CPU time 82164.903860
08:42:15 (3593475): called boinc_finish(0)

</stderr_txt>
]]>

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