Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:06:48 (2452629): wrapper (7.7.26015): starting
11:06:48 (2452629): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 11:06:48] Arguments: --nthreads 4
[2024-04-27 11:06:48] Threads: 4
[2024-04-27 11:06:48] Checking for CVMFS
[2024-04-27 11:06:48] No cvmfs_config command found, will try listing directly
[2024-04-27 11:06:48] CVMFS is ok
[2024-04-27 11:06:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 11:06:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 11:06:48] Further information can be found at the LHC@home message board.
[2024-04-27 11:06:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 11:06:48] Checking for apptainer binary...
[2024-04-27 11:06:48] which: no apptainer in ((null))
[2024-04-27 11:06:48] apptainer is not installed, using version from CVMFS
[2024-04-27 11:06:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 11:06:49] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-04-27 11:06:49] apptainer works
[2024-04-27 11:06:49] Set ATHENA_PROC_NUMBER=4
[2024-04-27 11:06:49] Set ATHENA_CORE_NUMBER=4
[2024-04-27 11:06:49] Starting ATLAS job with PandaID=6186329950
[2024-04-27 11:06:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 14:06:01]  *** The last 200 lines of the pilot log: ***
[2024-04-27 14:06:01]  checksum={'adler32': 'fb17481a'}
[2024-04-27 14:06:01]  dataset=mc23_13p6TeV.603414.PhPy8EG_NNPDF23_A14_ggH125_NNLOPS_tautauh30h20.simul.log.e8559_e8528_s4159_tid38207159_00
[2024-04-27 14:06:01]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 14:06:01]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 14:06:01]  direct_access_lan=False
[2024-04-27 14:06:01]  direct_access_wan=False
[2024-04-27 14:06:01]  domain=
[2024-04-27 14:06:01]  filesize=313575
[2024-04-27 14:06:01]  filetype=log
[2024-04-27 14:06:01]  guid=ca2dd606-992d-4614-84cc-6bbba29ecc90
[2024-04-27 14:06:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 14:06:01]  is_tar=False
[2024-04-27 14:06:01]  lfn=log.38207159._002086.job.log.tgz.1
[2024-04-27 14:06:01]  mtime=0
[2024-04-27 14:06:01]  protocol_id=None
[2024-04-27 14:06:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 14:06:01]  replicas=None
[2024-04-27 14:06:01]  scope=mc23_13p6TeV
[2024-04-27 14:06:01]  status=None
[2024-04-27 14:06:01]  status_code=0
[2024-04-27 14:06:01]  storage_token=
[2024-04-27 14:06:01]  surl=/scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6186329950/log.38207159._002086.job.log.tgz.1
[2024-04-27 14:06:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/db/log.38207159._002086.job.log.tgz.1
[2024-04-27 14:06:01]  workdir=None
[2024-04-27 14:06:01] ]
[2024-04-27 14:06:01] 2024-04-27 12:05:34,383 | INFO     | transferring file log.38207159._002086.job.log.tgz.1 from /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6186329950/log.38207159._002086.job.log.tgz.1 to /scratch/b
[2024-04-27 14:06:01] 2024-04-27 12:05:34,383 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6186329950/log.38207159._002086.job.log.tgz.1 /scratch/boinc/var/slot48/slots/0/lo
[2024-04-27 14:06:01] 2024-04-27 12:05:34,403 | INFO     | adding to output.list: log.38207159._002086.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/69/db/log.38207159._002086.job.log.tg
[2024-04-27 14:06:01] 2024-04-27 12:05:34,404 | INFO     | summary of transferred files:
[2024-04-27 14:06:01] 2024-04-27 12:05:34,404 | INFO     |  -- lfn=log.38207159._002086.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 14:06:01] 2024-04-27 12:05:34,404 | INFO     | stage-out finished correctly
[2024-04-27 14:06:01] 2024-04-27 12:05:34,478 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 14:06:01] 2024-04-27 12:05:35,848 | INFO     | job 6186329950 has state=finished
[2024-04-27 14:06:01] 2024-04-27 12:05:35,848 | INFO     | preparing for final server update for job 6186329950 in state='finished'
[2024-04-27 14:06:01] 2024-04-27 12:05:35,849 | INFO     | this job has now completed (state=finished)
[2024-04-27 14:06:01] 2024-04-27 12:05:35,849 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 14:06:01] 2024-04-27 12:05:35,849 | INFO     | job 6186329950 has finished - writing final server update
[2024-04-27 14:06:01] 2024-04-27 12:05:35,849 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2662029/.job.ad'
[2024-04-27 14:06:01] 2024-04-27 12:05:35,849 | INFO     | total number of processed events: 400 (read)
[2024-04-27 14:06:01] 2024-04-27 12:05:35,853 | INFO     | executing command: lscpu
[2024-04-27 14:06:01] 2024-04-27 12:05:35,895 | INFO     | found 32 cores (16 cores per socket, 2 sockets)
[2024-04-27 14:06:01] 2024-04-27 12:05:35,896 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 14:06:01] 2024-04-27 12:05:35,927 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 14:06:01] 2024-04-27 12:05:38,977 | INFO     | CPU arch script returned: x86-64-v4
[2024-04-27 14:06:01] 2024-04-27 12:05:38,977 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6186329950/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 14:06:01] 2024-04-27 12:05:38,978 | INFO     | extracted standard info from prmon json
[2024-04-27 14:06:01] 2024-04-27 12:05:38,978 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 14:06:01] 2024-04-27 12:05:38,979 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 14:06:01] 2024-04-27 12:05:38,979 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 14:06:01] 2024-04-27 12:05:38,981 | INFO     | fitting pss+swap vs Time
[2024-04-27 14:06:01] 2024-04-27 12:05:38,982 | INFO     | current chi2=4.335471318840835 (change=15.618512330789688 %)
[2024-04-27 14:06:01] 2024-04-27 12:05:38,982 | INFO     | right removable region: 170
[2024-04-27 14:06:01] 2024-04-27 12:05:38,983 | INFO     | current chi2=2.5443565020581955 (change=50.47906651544828 %)
[2024-04-27 14:06:01] 2024-04-27 12:05:38,983 | INFO     | current chi2=0.910085850963715 (change=64.23119754533127 %)
[2024-04-27 14:06:01] 2024-04-27 12:05:38,984 | INFO     | current chi2=0.851624040939474 (change=6.423768698561149 %)
[2024-04-27 14:06:01] 2024-04-27 12:05:38,984 | INFO     | left removable region: 30
[2024-04-27 14:06:01] 2024-04-27 12:05:38,984 | INFO     | current memory leak: -0.57 B/s (using 140 data points, chi2=0.00)
[2024-04-27 14:06:01] 2024-04-27 12:05:38,985 | INFO     | ..............................
[2024-04-27 14:06:01] 2024-04-27 12:05:38,985 | INFO     | . Timing measurements:
[2024-04-27 14:06:01] 2024-04-27 12:05:38,985 | INFO     | . get job = 0 s
[2024-04-27 14:06:01] 2024-04-27 12:05:38,985 | INFO     | . initial setup = 1 s
[2024-04-27 14:06:01] 2024-04-27 12:05:38,985 | INFO     | . payload setup = 4 s
[2024-04-27 14:06:01] 2024-04-27 12:05:38,985 | INFO     | . stage-in = 0 s
[2024-04-27 14:06:01] 2024-04-27 12:05:38,985 | INFO     | . payload execution = 10693 s
[2024-04-27 14:06:01] 2024-04-27 12:05:38,985 | INFO     | . stage-out = 0 s
[2024-04-27 14:06:01] 2024-04-27 12:05:38,985 | INFO     | . log creation = 0 s
[2024-04-27 14:06:01] 2024-04-27 12:05:38,985 | INFO     | ..............................
[2024-04-27 14:06:01] 2024-04-27 12:05:39,231 | INFO     | 
[2024-04-27 14:06:01] 2024-04-27 12:05:39,231 | WARNING  | process 2464183 is no longer using CPU - aborting
[2024-04-27 14:06:01] 2024-04-27 12:05:39,231 | INFO     | job summary report
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | aborting job monitoring since job object (job id=6186329950) has expired
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | --------------------------------------------------
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | PanDA job id: 6186329950
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | task id: 38207159
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | errors: (none)
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | pilot state: finished 
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | transexitcode: 0
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | exeerrorcode: 0
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | exeerrordiag: 
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | exitcode: 0
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | exitmsg: OK
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | cpuconsumptiontime: 39953 s
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | nevents: 400
[2024-04-27 14:06:01] 2024-04-27 12:05:39,232 | INFO     | neventsw: 0
[2024-04-27 14:06:01] 2024-04-27 12:05:39,233 | INFO     | pid: 2464183
[2024-04-27 14:06:01] 2024-04-27 12:05:39,233 | INFO     | pgrp: 2464183
[2024-04-27 14:06:01] 2024-04-27 12:05:39,233 | INFO     | corecount: 4
[2024-04-27 14:06:01] 2024-04-27 12:05:39,233 | INFO     | event service: False
[2024-04-27 14:06:01] 2024-04-27 12:05:39,233 | INFO     | sizes: {0: 2375601, 1: 2375743, 4: 2375949, 11: 2375977, 10702: 2405002, 10703: 2414168, 10708: 2414282}
[2024-04-27 14:06:01] 2024-04-27 12:05:39,233 | INFO     | --------------------------------------------------
[2024-04-27 14:06:01] 2024-04-27 12:05:39,233 | INFO     | 
[2024-04-27 14:06:01] 2024-04-27 12:05:39,233 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2024-04-27 14:06:01] 2024-04-27 12:05:39,248 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,248 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,248 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,248 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | job 6186329950 has completed (purged errors)
[2024-04-27 14:06:01] 2024-04-27 12:05:39,249 | INFO     | overall cleanup function is called
[2024-04-27 14:06:01] 2024-04-27 12:05:40,256 | INFO     | --- collectZombieJob: --- 10, [2464183]
[2024-04-27 14:06:01] 2024-04-27 12:05:40,256 | INFO     | zombie collector waiting for pid 2464183
[2024-04-27 14:06:01] 2024-04-27 12:05:40,256 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 14:06:01] 2024-04-27 12:05:41,261 | INFO     | collected zombie processes
[2024-04-27 14:06:01] 2024-04-27 12:05:41,262 | INFO     | will now attempt to kill all subprocesses of pid=2464183
[2024-04-27 14:06:01] 2024-04-27 12:05:41,412 | INFO     | process IDs to be killed: [2464183] (in reverse order)
[2024-04-27 14:06:01] 2024-04-27 12:05:41,521 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 14:06:01] 2024-04-27 12:05:41,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 14:06:01] 2024-04-27 12:05:41,527 | INFO     | did not find any defunct processes belonging to 2464183
[2024-04-27 14:06:01] 2024-04-27 12:05:41,532 | INFO     | did not find any defunct processes belonging to 2464183
[2024-04-27 14:06:01] 2024-04-27 12:05:41,532 | INFO     | ready for new job
[2024-04-27 14:06:01] 2024-04-27 12:05:41,533 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 14:06:01] 2024-04-27 12:05:41,534 | INFO     | *************************************
[2024-04-27 14:06:01] 2024-04-27 12:05:41,534 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 14:06:01] 2024-04-27 12:05:41,534 | INFO     | *************************************
[2024-04-27 14:06:01] 2024-04-27 12:05:41,534 | INFO     | 
[2024-04-27 14:06:01] 2024-04-27 12:05:41,537 | INFO     | architecture information:
[2024-04-27 14:06:01] 2024-04-27 12:05:41,537 | INFO     | executing command: cat /etc/os-release
[2024-04-27 14:06:01] 2024-04-27 12:05:41,550 | INFO     | cat /etc/os-release:
[2024-04-27 14:06:01] NAME="CentOS Linux"
[2024-04-27 14:06:01] VERSION="7 (Core)"
[2024-04-27 14:06:01] ID="centos"
[2024-04-27 14:06:01] ID_LIKE="rhel fedora"
[2024-04-27 14:06:01] VERSION_ID="7"
[2024-04-27 14:06:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 14:06:01] ANSI_COLOR="0;31"
[2024-04-27 14:06:01] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 14:06:01] HOME_URL="https://www.centos.org/"
[2024-04-27 14:06:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 14:06:01] 
[2024-04-27 14:06:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 14:06:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 14:06:01] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 14:06:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 14:06:01] 
[2024-04-27 14:06:01] 2024-04-27 12:05:41,550 | INFO     | *************************************
[2024-04-27 14:06:01] 2024-04-27 12:05:42,053 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2024-04-27 14:06:01] 2024-04-27 12:05:42,072 | INFO     | sufficient remaining disk space (619331977216 B)
[2024-04-27 14:06:01] 2024-04-27 12:05:42,072 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 14:06:01] 2024-04-27 12:05:42,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 14:06:01] 2024-04-27 12:05:42,230 | INFO     | all payload control threads have been joined
[2024-04-27 14:06:01] 2024-04-27 12:05:42,490 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 14:06:01] 2024-04-27 12:05:42,659 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 14:06:01] 2024-04-27 12:05:42,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 14:06:01] 2024-04-27 12:05:42,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 14:06:01] 2024-04-27 12:05:42,740 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 14:06:01] 2024-04-27 12:05:42,740 | INFO     | aborting loop
[2024-04-27 14:06:01] 2024-04-27 12:05:42,852 | INFO     | all data control threads have been joined
[2024-04-27 14:06:01] 2024-04-27 12:05:43,078 | INFO     | [job] retrieve thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:43,083 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:43,089 | INFO     | [job] validate thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:43,235 | INFO     | [payload] control thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:43,293 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:43,359 | INFO     | all job control threads have been joined
[2024-04-27 14:06:01] 2024-04-27 12:05:43,452 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:43,463 | INFO     | [payload] failed_post thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:43,532 | INFO     | [data] copytool_in thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:43,745 | INFO     | [job] job monitor thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:43,859 | INFO     | [data] control thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:44,048 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 14:06:01] 2024-04-27 12:05:44,128 | INFO     | [payload] validate_post thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:44,364 | INFO     | [job] control thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:44,495 | INFO     | [data] copytool_out thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:45,053 | INFO     | [job] queue monitor thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:45,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 14:06:01] 2024-04-27 12:05:49,062 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:52,326 | INFO     | job.realtimelogging is not enabled
[2024-04-27 14:06:01] 2024-04-27 12:05:53,331 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 14:06:01] 2024-04-27 12:05:55,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47812094932032)>', '<ExcThread(monitor, started 47812268267264)>']
[2024-04-27 14:06:01] 2024-04-27 12:05:55,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 14:06:01] 2024-04-27 12:05:55,714 | INFO     | [monitor] control thread has ended
[2024-04-27 14:06:01] 2024-04-27 12:06:00,276 | INFO     | all workflow threads have been joined
[2024-04-27 14:06:01] 2024-04-27 12:06:00,276 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 14:06:01] 2024-04-27 12:06:00,276 | INFO     | traces error code: 0
[2024-04-27 14:06:01] 2024-04-27 12:06:00,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 14:06:01] 2024-04-27 12:06:00,360 [wrapper] ==== pilot stdout END ====
[2024-04-27 14:06:01] 2024-04-27 12:06:00,361 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 14:06:01] 2024-04-27 12:06:00,363 [wrapper] pilotpid: 2457043
[2024-04-27 14:06:01] 2024-04-27 12:06:00,365 [wrapper] Pilot exit status: 0
[2024-04-27 14:06:01] 2024-04-27 12:06:00,372 [wrapper] pandaids: 6186329950
[2024-04-27 14:06:01] 2024-04-27 12:06:00,423 [wrapper] cleanup: SIGTERM to supervisor_pilot 2895405 2457044
[2024-04-27 14:06:01] 2024-04-27 12:06:00,425 [wrapper] Test setup, not cleaning
[2024-04-27 14:06:01] 2024-04-27 12:06:00,427 [wrapper] ==== wrapper stdout END ====
[2024-04-27 14:06:01] 2024-04-27 12:06:00,429 [wrapper] ==== wrapper stderr END ====
[2024-04-27 14:06:01] 2024-04-27 12:06:00,432 [wrapper] apfmon messages muted
[2024-04-27 14:06:01]  *** Error codes and diagnostics ***
[2024-04-27 14:06:01]     "exeErrorCode": 0,
[2024-04-27 14:06:01]     "exeErrorDiag": "",
[2024-04-27 14:06:01]     "pilotErrorCode": 0,
[2024-04-27 14:06:01]     "pilotErrorDiag": "",
[2024-04-27 14:06:01]  *** Listing of results directory ***
[2024-04-27 14:06:01] total 700392
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc    462745 Apr 25 13:34 pilot3.tar.gz
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc      6173 Apr 25 13:34 queuedata.json
[2024-04-27 14:06:01] -rwx------ 1 boinc boinc     32211 Apr 25 13:37 runpilot2-wrapper.sh
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc       100 Apr 27 11:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 14:06:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 11:06 run_atlas
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc       105 Apr 27 11:06 job.xml
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc      6663 Apr 27 11:06 init_data.xml
[2024-04-27 14:06:01] -rw-r--r-- 2 boinc boinc 518263156 Apr 27 11:06 EVNT.38207157._000080.pool.root.1
[2024-04-27 14:06:01] -rw-r--r-- 2 boinc boinc     17537 Apr 27 11:06 start_atlas.sh
[2024-04-27 14:06:01] drwxrwx--x 2 boinc boinc      4096 Apr 27 11:06 shared
[2024-04-27 14:06:01] -rw-r--r-- 2 boinc boinc    474806 Apr 27 11:06 input.tar.gz
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc         0 Apr 27 11:06 boinc_lockfile
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc      2649 Apr 27 11:06 pandaJob.out
[2024-04-27 14:06:01] -rw------- 1 boinc boinc       424 Apr 27 11:06 setup.sh.local
[2024-04-27 14:06:01] -rw------- 1 boinc boinc    997441 Apr 27 11:06 agis_schedconf.cvmfs.json
[2024-04-27 14:06:01] -rw------- 1 boinc boinc         0 Apr 27 11:06 agis_ddmendpoints.agis.ALL.json
[2024-04-27 14:06:01] -rw------- 1 boinc boinc   1315307 Apr 27 11:06 cric_ddmendpoints.json
[2024-04-27 14:06:01] drwx------ 4 boinc boinc      4096 Apr 27 11:06 pilot3
[2024-04-27 14:06:01] -rw------- 1 boinc boinc 192762368 Apr 27 14:05 HITS.38207159._002086.pool.root.1
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc       531 Apr 27 14:05 boinc_task_state.xml
[2024-04-27 14:06:01] -rw------- 1 boinc boinc        95 Apr 27 14:05 pilot_heartbeat.json
[2024-04-27 14:06:01] -rw------- 1 boinc boinc      1051 Apr 27 14:05 memory_monitor_summary.json
[2024-04-27 14:06:01] -rw------- 1 boinc boinc    313575 Apr 27 14:05 log.38207159._002086.job.log.tgz.1
[2024-04-27 14:06:01] -rw------- 1 boinc boinc      7741 Apr 27 14:05 heartbeat.json
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc      8192 Apr 27 14:05 boinc_mmap_file
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc        28 Apr 27 14:05 wrapper_checkpoint.txt
[2024-04-27 14:06:01] -rw------- 1 boinc boinc      4293 Apr 27 14:06 pilotlog.txt
[2024-04-27 14:06:01] -rw------- 1 boinc boinc   1024677 Apr 27 14:06 log.38207159._002086.job.log.1
[2024-04-27 14:06:01] -rw------- 1 boinc boinc       357 Apr 27 14:06 output.list
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc       620 Apr 27 14:06 runtime_log
[2024-04-27 14:06:01] -rw------- 1 boinc boinc   1361920 Apr 27 14:06 result.tar.gz
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc     11410 Apr 27 14:06 runtime_log.err
[2024-04-27 14:06:01] -rw------- 1 boinc boinc       657 Apr 27 14:06 VhVKDmbaCK5n9Rq4apoT9bVoABFKDmABFKDmtztZDmLIOKDmMVeC9n.diag
[2024-04-27 14:06:01] -rw-r--r-- 1 boinc boinc     20817 Apr 27 14:06 stderr.txt
[2024-04-27 14:06:01] HITS file was successfully produced:
[2024-04-27 14:06:01] -rw------- 1 boinc boinc 192762368 Apr 27 14:05 shared/HITS.pool.root.1
[2024-04-27 14:06:01]  *** Contents of shared directory: ***
[2024-04-27 14:06:01] total 696192
[2024-04-27 14:06:01] -rw-r--r-- 2 boinc boinc 518263156 Apr 27 11:06 ATLAS.root_0
[2024-04-27 14:06:01] -rw-r--r-- 2 boinc boinc     17537 Apr 27 11:06 start_atlas.sh
[2024-04-27 14:06:01] -rw-r--r-- 2 boinc boinc    474806 Apr 27 11:06 input.tar.gz
[2024-04-27 14:06:01] -rw------- 1 boinc boinc 192762368 Apr 27 14:05 HITS.pool.root.1
[2024-04-27 14:06:01] -rw------- 1 boinc boinc   1361920 Apr 27 14:06 result.tar.gz
14:06:02 (2452629): run_atlas exited; CPU time 39725.016945
14:06:02 (2452629): called boinc_finish(0)

</stderr_txt>
]]>

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