Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:06:55 (3196908): wrapper (7.7.26015): starting
07:06:55 (3196908): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 07:06:55] Arguments: --nthreads 4
[2024-04-27 07:06:55] Threads: 4
[2024-04-27 07:06:55] Checking for CVMFS
[2024-04-27 07:06:55] No cvmfs_config command found, will try listing directly
[2024-04-27 07:06:55] CVMFS is ok
[2024-04-27 07:06:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 07:06:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 07:06:55] Further information can be found at the LHC@home message board.
[2024-04-27 07:06:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 07:06:55] Checking for apptainer binary...
[2024-04-27 07:06:55] which: no apptainer in ((null))
[2024-04-27 07:06:55] apptainer is not installed, using version from CVMFS
[2024-04-27 07:06:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 07:06:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-04-27 07:06:56] apptainer works
[2024-04-27 07:06:56] Set ATHENA_PROC_NUMBER=4
[2024-04-27 07:06:56] Set ATHENA_CORE_NUMBER=4
[2024-04-27 07:06:56] Starting ATLAS job with PandaID=6185126488
[2024-04-27 07:06:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-27 10:05:40]  *** The last 200 lines of the pilot log: ***
[2024-04-27 10:05:40]  ddm_activity=['write_lan', 'write_wan']
[2024-04-27 10:05:40]  ddmendpoint=NDGF-T1_DATADISK
[2024-04-27 10:05:40]  direct_access_lan=False
[2024-04-27 10:05:40]  direct_access_wan=False
[2024-04-27 10:05:40]  domain=
[2024-04-27 10:05:40]  filesize=291039
[2024-04-27 10:05:40]  filetype=log
[2024-04-27 10:05:40]  guid=d70115c8-7b15-4524-ad86-1e73704a5229
[2024-04-27 10:05:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-27 10:05:40]  is_tar=False
[2024-04-27 10:05:40]  lfn=log.38203151._013955.job.log.tgz.1
[2024-04-27 10:05:40]  mtime=0
[2024-04-27 10:05:40]  protocol_id=None
[2024-04-27 10:05:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-27 10:05:40]  replicas=None
[2024-04-27 10:05:40]  scope=mc23_13p6TeV
[2024-04-27 10:05:40]  status=None
[2024-04-27 10:05:40]  status_code=0
[2024-04-27 10:05:40]  storage_token=
[2024-04-27 10:05:40]  surl=/scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6185126488/log.38203151._013955.job.log.tgz.1
[2024-04-27 10:05:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/d7/log.38203151._013955.job.log.tgz.1
[2024-04-27 10:05:40]  workdir=None
[2024-04-27 10:05:40] ]
[2024-04-27 10:05:40] 2024-04-27 08:05:19,982 | INFO     | transferring file log.38203151._013955.job.log.tgz.1 from /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6185126488/log.38203151._013955.job.log.tgz.1 to /scratch/b
[2024-04-27 10:05:40] 2024-04-27 08:05:19,983 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6185126488/log.38203151._013955.job.log.tgz.1 /scratch/boinc/var/slot80/slots/0/lo
[2024-04-27 10:05:40] 2024-04-27 08:05:19,999 | INFO     | adding to output.list: log.38203151._013955.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/77/d7/log.38203151._013955.job.log.tg
[2024-04-27 10:05:40] 2024-04-27 08:05:20,000 | INFO     | summary of transferred files:
[2024-04-27 10:05:40] 2024-04-27 08:05:20,000 | INFO     |  -- lfn=log.38203151._013955.job.log.tgz.1, status_code=0, status=transferred
[2024-04-27 10:05:40] 2024-04-27 08:05:20,000 | INFO     | stage-out finished correctly
[2024-04-27 10:05:40] 2024-04-27 08:05:20,066 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-27 10:05:40] 2024-04-27 08:05:20,150 | INFO     | job 6185126488 has state=finished
[2024-04-27 10:05:40] 2024-04-27 08:05:20,151 | INFO     | preparing for final server update for job 6185126488 in state='finished'
[2024-04-27 10:05:40] 2024-04-27 08:05:20,151 | INFO     | this job has now completed (state=finished)
[2024-04-27 10:05:40] 2024-04-27 08:05:20,151 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-27 10:05:40] 2024-04-27 08:05:20,151 | INFO     | job 6185126488 has finished - writing final server update
[2024-04-27 10:05:40] 2024-04-27 08:05:20,152 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_805093/.job.ad'
[2024-04-27 10:05:40] 2024-04-27 08:05:20,152 | INFO     | total number of processed events: 400 (read)
[2024-04-27 10:05:40] 2024-04-27 08:05:20,160 | INFO     | executing command: lscpu
[2024-04-27 10:05:40] 2024-04-27 08:05:20,206 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-04-27 10:05:40] 2024-04-27 08:05:20,206 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-27 10:05:40] 2024-04-27 08:05:20,237 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-27 10:05:40] 2024-04-27 08:05:24,017 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-27 10:05:40] 2024-04-27 08:05:24,018 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-6185126488/memory_monitor_summary.json (trf name=prmon)
[2024-04-27 10:05:40] 2024-04-27 08:05:24,019 | INFO     | extracted standard info from prmon json
[2024-04-27 10:05:40] 2024-04-27 08:05:24,019 | INFO     | extracted standard memory fields from prmon json
[2024-04-27 10:05:40] 2024-04-27 08:05:24,019 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-27 10:05:40] 2024-04-27 08:05:24,019 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-27 10:05:40] 2024-04-27 08:05:24,023 | INFO     | fitting pss+swap vs Time
[2024-04-27 10:05:40] 2024-04-27 08:05:24,025 | INFO     | current chi2=4.318162211451527 (change=0.03756947601832903 %)
[2024-04-27 10:05:40] 2024-04-27 08:05:24,025 | INFO     | right removable region: 169
[2024-04-27 10:05:40] 2024-04-27 08:05:24,027 | INFO     | current chi2=1.6836399100735955 (change=61.024915392985854 %)
[2024-04-27 10:05:40] 2024-04-27 08:05:24,028 | INFO     | current chi2=0.05939872340228627 (change=96.47200550147983 %)
[2024-04-27 10:05:40] 2024-04-27 08:05:24,029 | INFO     | current chi2=0.0015484559830732435 (change=97.39311571969972 %)
[2024-04-27 10:05:40] 2024-04-27 08:05:24,030 | INFO     | current chi2=0.0008595581554165874 (change=44.48933874693618 %)
[2024-04-27 10:05:40] 2024-04-27 08:05:24,031 | INFO     | current chi2=0.0006451325870493258 (change=24.946022211067227 %)
[2024-04-27 10:05:40] 2024-04-27 08:05:24,031 | INFO     | left removable region: 50
[2024-04-27 10:05:40] 2024-04-27 08:05:24,032 | INFO     | current memory leak: 0.32 B/s (using 119 data points, chi2=0.00)
[2024-04-27 10:05:40] 2024-04-27 08:05:24,032 | INFO     | ..............................
[2024-04-27 10:05:40] 2024-04-27 08:05:24,032 | INFO     | . Timing measurements:
[2024-04-27 10:05:40] 2024-04-27 08:05:24,032 | INFO     | . get job = 0 s
[2024-04-27 10:05:40] 2024-04-27 08:05:24,033 | INFO     | . initial setup = 1 s
[2024-04-27 10:05:40] 2024-04-27 08:05:24,033 | INFO     | . payload setup = 5 s
[2024-04-27 10:05:40] 2024-04-27 08:05:24,033 | INFO     | . stage-in = 0 s
[2024-04-27 10:05:40] 2024-04-27 08:05:24,033 | INFO     | . payload execution = 10668 s
[2024-04-27 10:05:40] 2024-04-27 08:05:24,033 | INFO     | . stage-out = 0 s
[2024-04-27 10:05:40] 2024-04-27 08:05:24,033 | INFO     | . log creation = 0 s
[2024-04-27 10:05:40] 2024-04-27 08:05:24,033 | INFO     | ..............................
[2024-04-27 10:05:40] 2024-04-27 08:05:24,116 | INFO     | 
[2024-04-27 10:05:40] 2024-04-27 08:05:24,117 | INFO     | job summary report
[2024-04-27 10:05:40] 2024-04-27 08:05:24,117 | INFO     | --------------------------------------------------
[2024-04-27 10:05:40] 2024-04-27 08:05:24,117 | INFO     | PanDA job id: 6185126488
[2024-04-27 10:05:40] 2024-04-27 08:05:24,117 | INFO     | task id: 38203151
[2024-04-27 10:05:40] 2024-04-27 08:05:24,117 | INFO     | errors: (none)
[2024-04-27 10:05:40] 2024-04-27 08:05:24,117 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-27 10:05:40] 2024-04-27 08:05:24,117 | INFO     | pilot state: finished 
[2024-04-27 10:05:40] 2024-04-27 08:05:24,117 | INFO     | transexitcode: 0
[2024-04-27 10:05:40] 2024-04-27 08:05:24,117 | INFO     | exeerrorcode: 0
[2024-04-27 10:05:40] 2024-04-27 08:05:24,117 | INFO     | exeerrordiag: 
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | exitcode: 0
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | exitmsg: OK
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | cpuconsumptiontime: 39983 s
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | nevents: 400
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | neventsw: 0
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | pid: 3211473
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | pgrp: 3211473
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | corecount: 4
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | event service: False
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | sizes: {0: 2374073, 1: 2375620, 5: 2375826, 12: 2375882, 10677: 2404843, 10678: 2414009, 10682: 2414123}
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | --------------------------------------------------
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | 
[2024-04-27 10:05:40] 2024-04-27 08:05:24,118 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2024-04-27 10:05:40] 2024-04-27 08:05:24,140 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,141 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,141 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,141 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,141 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,141 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,141 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,141 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,141 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,142 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,142 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-27 10:05:40] 2024-04-27 08:05:24,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,142 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-27 10:05:40] 2024-04-27 08:05:24,142 | INFO     | job 6185126488 has completed (purged errors)
[2024-04-27 10:05:40] 2024-04-27 08:05:24,142 | INFO     | overall cleanup function is called
[2024-04-27 10:05:40] 2024-04-27 08:05:25,149 | INFO     | --- collectZombieJob: --- 10, [3211473]
[2024-04-27 10:05:40] 2024-04-27 08:05:25,150 | INFO     | zombie collector waiting for pid 3211473
[2024-04-27 10:05:40] 2024-04-27 08:05:25,150 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-27 10:05:40] 2024-04-27 08:05:26,154 | INFO     | collected zombie processes
[2024-04-27 10:05:40] 2024-04-27 08:05:26,160 | INFO     | will now attempt to kill all subprocesses of pid=3211473
[2024-04-27 10:05:40] 2024-04-27 08:05:26,167 | WARNING  | process 3211473 is no longer using CPU - aborting
[2024-04-27 10:05:40] 2024-04-27 08:05:26,167 | INFO     | aborting job monitoring since job object (job id=6185126488) has expired
[2024-04-27 10:05:40] 2024-04-27 08:05:26,436 | INFO     | process IDs to be killed: [3211473] (in reverse order)
[2024-04-27 10:05:40] 2024-04-27 08:05:26,634 | WARNING  | found no corresponding commands to process id(s)
[2024-04-27 10:05:40] 2024-04-27 08:05:26,634 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-27 10:05:40] 2024-04-27 08:05:26,653 | INFO     | did not find any defunct processes belonging to 3211473
[2024-04-27 10:05:40] 2024-04-27 08:05:26,665 | INFO     | did not find any defunct processes belonging to 3211473
[2024-04-27 10:05:40] 2024-04-27 08:05:26,666 | INFO     | ready for new job
[2024-04-27 10:05:40] 2024-04-27 08:05:26,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-27 10:05:40] 2024-04-27 08:05:26,668 | INFO     | *************************************
[2024-04-27 10:05:40] 2024-04-27 08:05:26,668 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-27 10:05:40] 2024-04-27 08:05:26,668 | INFO     | *************************************
[2024-04-27 10:05:40] 2024-04-27 08:05:26,668 | INFO     | 
[2024-04-27 10:05:40] 2024-04-27 08:05:26,675 | INFO     | architecture information:
[2024-04-27 10:05:40] 2024-04-27 08:05:26,676 | INFO     | executing command: cat /etc/os-release
[2024-04-27 10:05:40] 2024-04-27 08:05:26,693 | INFO     | cat /etc/os-release:
[2024-04-27 10:05:40] NAME="CentOS Linux"
[2024-04-27 10:05:40] VERSION="7 (Core)"
[2024-04-27 10:05:40] ID="centos"
[2024-04-27 10:05:40] ID_LIKE="rhel fedora"
[2024-04-27 10:05:40] VERSION_ID="7"
[2024-04-27 10:05:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-27 10:05:40] ANSI_COLOR="0;31"
[2024-04-27 10:05:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-27 10:05:40] HOME_URL="https://www.centos.org/"
[2024-04-27 10:05:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-27 10:05:40] 
[2024-04-27 10:05:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-27 10:05:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-27 10:05:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-27 10:05:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-27 10:05:40] 
[2024-04-27 10:05:40] 2024-04-27 08:05:26,694 | INFO     | *************************************
[2024-04-27 10:05:40] 2024-04-27 08:05:27,197 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2024-04-27 10:05:40] 2024-04-27 08:05:27,213 | INFO     | sufficient remaining disk space (3056759472128 B)
[2024-04-27 10:05:40] 2024-04-27 08:05:27,213 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-27 10:05:40] 2024-04-27 08:05:27,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-27 10:05:40] 2024-04-27 08:05:27,214 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-27 10:05:40] 2024-04-27 08:05:27,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-27 10:05:40] 2024-04-27 08:05:27,215 | INFO     | found 0 job(s) in 20 queues
[2024-04-27 10:05:40] 2024-04-27 08:05:27,215 | INFO     | aborting loop
[2024-04-27 10:05:40] 2024-04-27 08:05:27,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-27 10:05:40] 2024-04-27 08:05:27,216 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-27 10:05:40] 2024-04-27 08:05:27,948 | INFO     | all payload control threads have been joined
[2024-04-27 10:05:40] 2024-04-27 08:05:28,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-27 10:05:40] 2024-04-27 08:05:28,092 | INFO     | all data control threads have been joined
[2024-04-27 10:05:40] 2024-04-27 08:05:28,219 | INFO     | [job] retrieve thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:28,221 | INFO     | [job] job monitor thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:28,329 | INFO     | [payload] validate_post thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:28,362 | INFO     | [job] validate thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:28,574 | INFO     | [payload] failed_post thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:28,682 | INFO     | all job control threads have been joined
[2024-04-27 10:05:40] 2024-04-27 08:05:28,748 | INFO     | [data] copytool_in thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:28,953 | INFO     | [payload] control thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:28,992 | INFO     | [job] create_data_payload thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:29,096 | INFO     | [data] control thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:29,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-27 10:05:40] 2024-04-27 08:05:29,145 | INFO     | [payload] execute_payloads thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:29,195 | INFO     | [payload] validate_pre thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:29,566 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:29,688 | INFO     | [job] control thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:30,085 | INFO     | [data] copytool_out thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:30,132 | INFO     | [job] queue monitor thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:30,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-27 10:05:40] 2024-04-27 08:05:34,668 | INFO     | [data] queue_monitor thread has finished
[2024-04-27 10:05:40] 2024-04-27 08:05:34,838 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47333492208704)>', '<ExcThread(monitor, started 47333665543936)>']
[2024-04-27 10:05:40] 2024-04-27 08:05:35,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-27 10:05:40] 2024-04-27 08:05:35,253 | INFO     | [monitor] control thread has ended
[2024-04-27 10:05:40] 2024-04-27 08:05:39,863 | INFO     | all workflow threads have been joined
[2024-04-27 10:05:40] 2024-04-27 08:05:39,864 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-27 10:05:40] 2024-04-27 08:05:39,864 | INFO     | traces error code: 0
[2024-04-27 10:05:40] 2024-04-27 08:05:39,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-27 10:05:40] 2024-04-27 08:05:39,966 [wrapper] ==== pilot stdout END ====
[2024-04-27 10:05:40] 2024-04-27 08:05:39,968 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-27 10:05:40] 2024-04-27 08:05:39,971 [wrapper] pilotpid: 3201642
[2024-04-27 10:05:40] 2024-04-27 08:05:39,973 [wrapper] Pilot exit status: 0
[2024-04-27 10:05:40] 2024-04-27 08:05:39,982 [wrapper] pandaids: 6185126488
[2024-04-27 10:05:40] 2024-04-27 08:05:40,069 [wrapper] cleanup: SIGTERM to supervisor_pilot   19266 3201643
[2024-04-27 10:05:40] 2024-04-27 08:05:40,073 [wrapper] Test setup, not cleaning
[2024-04-27 10:05:40] 2024-04-27 08:05:40,078 [wrapper] ==== wrapper stdout END ====
[2024-04-27 10:05:40] 2024-04-27 08:05:40,081 [wrapper] ==== wrapper stderr END ====
[2024-04-27 10:05:40] 2024-04-27 08:05:40,087 [wrapper] apfmon messages muted
[2024-04-27 10:05:40]  *** Error codes and diagnostics ***
[2024-04-27 10:05:40]     "exeErrorCode": 0,
[2024-04-27 10:05:40]     "exeErrorDiag": "",
[2024-04-27 10:05:40]     "pilotErrorCode": 0,
[2024-04-27 10:05:40]     "pilotErrorDiag": "",
[2024-04-27 10:05:40]  *** Listing of results directory ***
[2024-04-27 10:05:40] total 717672
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc    462745 Apr 24 15:48 pilot3.tar.gz
[2024-04-27 10:05:40] -rwx------ 1 boinc boinc     32211 Apr 24 16:10 runpilot2-wrapper.sh
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc      6720 Apr 24 16:10 queuedata.json
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc       100 Apr 27 07:06 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-27 10:05:40] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 07:06 run_atlas
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc       105 Apr 27 07:06 job.xml
[2024-04-27 10:05:40] -rw-r--r-- 2 boinc boinc 520346668 Apr 27 07:06 EVNT.38203149._000326.pool.root.1
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc      6643 Apr 27 07:06 init_data.xml
[2024-04-27 10:05:40] -rw-r--r-- 2 boinc boinc     17537 Apr 27 07:06 start_atlas.sh
[2024-04-27 10:05:40] drwxrwx--x 2 boinc boinc      4096 Apr 27 07:06 shared
[2024-04-27 10:05:40] -rw-r--r-- 2 boinc boinc    474790 Apr 27 07:06 input.tar.gz
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc         0 Apr 27 07:06 boinc_lockfile
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc      2553 Apr 27 07:06 pandaJob.out
[2024-04-27 10:05:40] -rw------- 1 boinc boinc       424 Apr 27 07:06 setup.sh.local
[2024-04-27 10:05:40] -rw------- 1 boinc boinc    997391 Apr 27 07:07 agis_schedconf.cvmfs.json
[2024-04-27 10:05:40] -rw------- 1 boinc boinc         0 Apr 27 07:07 agis_ddmendpoints.agis.ALL.json
[2024-04-27 10:05:40] -rw------- 1 boinc boinc   1315307 Apr 27 07:07 cric_ddmendpoints.json
[2024-04-27 10:05:40] drwx------ 4 boinc boinc      4096 Apr 27 07:07 pilot3
[2024-04-27 10:05:40] -rw------- 1 boinc boinc        95 Apr 27 10:04 pilot_heartbeat.json
[2024-04-27 10:05:40] -rw------- 1 boinc boinc 208457299 Apr 27 10:04 HITS.38203151._013955.pool.root.1
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc       531 Apr 27 10:05 boinc_task_state.xml
[2024-04-27 10:05:40] -rw------- 1 boinc boinc      1055 Apr 27 10:05 memory_monitor_summary.json
[2024-04-27 10:05:40] -rw------- 1 boinc boinc    291039 Apr 27 10:05 log.38203151._013955.job.log.tgz.1
[2024-04-27 10:05:40] -rw------- 1 boinc boinc      7700 Apr 27 10:05 heartbeat.json
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc      8192 Apr 27 10:05 boinc_mmap_file
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc        28 Apr 27 10:05 wrapper_checkpoint.txt
[2024-04-27 10:05:40] -rw------- 1 boinc boinc      4345 Apr 27 10:05 pilotlog.txt
[2024-04-27 10:05:40] -rw------- 1 boinc boinc   1009705 Apr 27 10:05 log.38203151._013955.job.log.1
[2024-04-27 10:05:40] -rw------- 1 boinc boinc       357 Apr 27 10:05 output.list
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc       620 Apr 27 10:05 runtime_log
[2024-04-27 10:05:40] -rw------- 1 boinc boinc   1320960 Apr 27 10:05 result.tar.gz
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc     11410 Apr 27 10:05 runtime_log.err
[2024-04-27 10:05:40] -rw------- 1 boinc boinc       658 Apr 27 10:05 3WrMDmMVsJ5nsSi4apGgGQJmABFKDmABFKDmRLXKDm08QKDmgxr6vm.diag
[2024-04-27 10:05:40] -rw-r--r-- 1 boinc boinc     20925 Apr 27 10:05 stderr.txt
[2024-04-27 10:05:40] HITS file was successfully produced:
[2024-04-27 10:05:40] -rw------- 1 boinc boinc 208457299 Apr 27 10:04 shared/HITS.pool.root.1
[2024-04-27 10:05:40]  *** Contents of shared directory: ***
[2024-04-27 10:05:40] total 713508
[2024-04-27 10:05:40] -rw-r--r-- 2 boinc boinc 520346668 Apr 27 07:06 ATLAS.root_0
[2024-04-27 10:05:40] -rw-r--r-- 2 boinc boinc     17537 Apr 27 07:06 start_atlas.sh
[2024-04-27 10:05:40] -rw-r--r-- 2 boinc boinc    474790 Apr 27 07:06 input.tar.gz
[2024-04-27 10:05:40] -rw------- 1 boinc boinc 208457299 Apr 27 10:04 HITS.pool.root.1
[2024-04-27 10:05:40] -rw------- 1 boinc boinc   1320960 Apr 27 10:05 result.tar.gz
10:05:42 (3196908): run_atlas exited; CPU time 39739.746101
10:05:42 (3196908): called boinc_finish(0)

</stderr_txt>
]]>

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