Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:28:25 (3130868): wrapper (7.7.26015): starting
22:28:25 (3130868): wrapper: running run_atlas (--nthreads 4)
[2024-04-27 22:28:25] Arguments: --nthreads 4
[2024-04-27 22:28:25] Threads: 4
[2024-04-27 22:28:25] Checking for CVMFS
[2024-04-27 22:28:25] No cvmfs_config command found, will try listing directly
[2024-04-27 22:28:25] CVMFS is ok
[2024-04-27 22:28:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-04-27 22:28:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-04-27 22:28:25] Further information can be found at the LHC@home message board.
[2024-04-27 22:28:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-04-27 22:28:25] Checking for apptainer binary...
[2024-04-27 22:28:25] which: no apptainer in ((null))
[2024-04-27 22:28:25] apptainer is not installed, using version from CVMFS
[2024-04-27 22:28:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-04-27 22:28:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2024-04-27 22:28:26] apptainer works
[2024-04-27 22:28:26] Set ATHENA_PROC_NUMBER=4
[2024-04-27 22:28:26] Set ATHENA_CORE_NUMBER=4
[2024-04-27 22:28:26] Starting ATLAS job with PandaID=6186189811
[2024-04-27 22:28:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-04-28 02:42:43]  *** The last 200 lines of the pilot log: ***
[2024-04-28 02:42:43]  guid=dd01849d-1a38-4454-be91-f2b67b4e5ddc
[2024-04-28 02:42:43]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-04-28 02:42:43]  is_tar=False
[2024-04-28 02:42:43]  lfn=log.38204311._004845.job.log.tgz.1
[2024-04-28 02:42:43]  mtime=0
[2024-04-28 02:42:43]  protocol_id=None
[2024-04-28 02:42:43]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-04-28 02:42:43]  replicas=None
[2024-04-28 02:42:43]  scope=mc23_13p6TeV
[2024-04-28 02:42:43]  status=None
[2024-04-28 02:42:43]  status_code=0
[2024-04-28 02:42:43]  storage_token=
[2024-04-28 02:42:43]  surl=/scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6186189811/log.38204311._004845.job.log.tgz.1
[2024-04-28 02:42:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/c1/log.38204311._004845.job.log.tgz.1
[2024-04-28 02:42:43]  workdir=None
[2024-04-28 02:42:43] ]
[2024-04-28 02:42:43] 2024-04-28 00:42:12,398 | INFO     | transferring file log.38204311._004845.job.log.tgz.1 from /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6186189811/log.38204311._004845.job.log.tgz.1 to /scratch/b
[2024-04-28 02:42:43] 2024-04-28 00:42:12,398 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6186189811/log.38204311._004845.job.log.tgz.1 /scratch/boinc/var/slot40/slots/0/lo
[2024-04-28 02:42:43] 2024-04-28 00:42:12,419 | INFO     | adding to output.list: log.38204311._004845.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/c1/log.38204311._004845.job.log.tg
[2024-04-28 02:42:43] 2024-04-28 00:42:12,420 | INFO     | summary of transferred files:
[2024-04-28 02:42:43] 2024-04-28 00:42:12,420 | INFO     |  -- lfn=log.38204311._004845.job.log.tgz.1, status_code=0, status=transferred
[2024-04-28 02:42:43] 2024-04-28 00:42:12,421 | INFO     | stage-out finished correctly
[2024-04-28 02:42:43] 2024-04-28 00:42:13,067 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-04-28 02:42:43] 2024-04-28 00:42:13,386 | INFO     | monitor loop #1168: job 0:6186189811 is in state 'finished'
[2024-04-28 02:42:43] 2024-04-28 00:42:13,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 02:42:43] 2024-04-28 00:42:15,071 | INFO     | job 6186189811 has state=finished
[2024-04-28 02:42:43] 2024-04-28 00:42:15,072 | INFO     | preparing for final server update for job 6186189811 in state='finished'
[2024-04-28 02:42:43] 2024-04-28 00:42:15,085 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /scratch/boinc/var/slot40/slots/0/PanDA_Pilot
[2024-04-28 02:42:43] 2024-04-28 00:42:15,889 | INFO     | monitor loop #1169: job 0:6186189811 is in state 'finished'
[2024-04-28 02:42:43] 2024-04-28 00:42:15,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 02:42:43] 2024-04-28 00:42:16,621 | INFO     | this job has now completed (state=finished)
[2024-04-28 02:42:43] 2024-04-28 00:42:16,622 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-04-28 02:42:43] 2024-04-28 00:42:16,622 | INFO     | job 6186189811 has finished - writing final server update
[2024-04-28 02:42:43] 2024-04-28 00:42:16,622 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_97867/.job.ad'
[2024-04-28 02:42:43] 2024-04-28 00:42:16,622 | INFO     | total number of processed events: 400 (read)
[2024-04-28 02:42:43] 2024-04-28 00:42:16,630 | INFO     | executing command: lscpu
[2024-04-28 02:42:43] 2024-04-28 00:42:16,675 | INFO     | found 20 cores (10 cores per socket, 2 sockets)
[2024-04-28 02:42:43] 2024-04-28 00:42:16,675 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-04-28 02:42:43] 2024-04-28 00:42:16,726 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-04-28 02:42:43] 2024-04-28 00:42:18,451 | INFO     | monitor loop #1170: job 0:6186189811 is in state 'finished'
[2024-04-28 02:42:43] 2024-04-28 00:42:18,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 02:42:43] 2024-04-28 00:42:20,956 | INFO     | monitor loop #1171: job 0:6186189811 is in state 'finished'
[2024-04-28 02:42:43] 2024-04-28 00:42:20,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-04-28 02:42:43] 2024-04-28 00:42:21,889 | INFO     | CPU arch script returned: x86-64-v3
[2024-04-28 02:42:43] 2024-04-28 00:42:21,889 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6186189811/memory_monitor_summary.json (trf name=prmon)
[2024-04-28 02:42:43] 2024-04-28 00:42:21,891 | INFO     | extracted standard info from prmon json
[2024-04-28 02:42:43] 2024-04-28 00:42:21,891 | INFO     | extracted standard memory fields from prmon json
[2024-04-28 02:42:43] 2024-04-28 00:42:21,891 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-04-28 02:42:43] 2024-04-28 00:42:21,891 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-04-28 02:42:43] 2024-04-28 00:42:21,897 | INFO     | fitting pss+swap vs Time
[2024-04-28 02:42:43] 2024-04-28 00:42:21,901 | INFO     | current chi2=3.421180085375283 (change=-0.03538151166616427 %)
[2024-04-28 02:42:43] 2024-04-28 00:42:21,902 | INFO     | right removable region: 243
[2024-04-28 02:42:43] 2024-04-28 00:42:21,904 | INFO     | current chi2=1.2730020368745036 (change=62.777392231341686 %)
[2024-04-28 02:42:43] 2024-04-28 00:42:21,906 | INFO     | current chi2=0.08697920620270364 (change=93.1673945772894 %)
[2024-04-28 02:42:43] 2024-04-28 00:42:21,908 | INFO     | current chi2=0.023335085892617333 (change=73.17164997087316 %)
[2024-04-28 02:42:43] 2024-04-28 00:42:21,910 | INFO     | current chi2=0.020704714058506102 (change=11.272175496655953 %)
[2024-04-28 02:42:43] 2024-04-28 00:42:21,911 | INFO     | left removable region: 40
[2024-04-28 02:42:43] 2024-04-28 00:42:21,912 | INFO     | current memory leak: 1.19 B/s (using 203 data points, chi2=0.00)
[2024-04-28 02:42:43] 2024-04-28 00:42:21,913 | INFO     | ..............................
[2024-04-28 02:42:43] 2024-04-28 00:42:21,913 | INFO     | . Timing measurements:
[2024-04-28 02:42:43] 2024-04-28 00:42:21,913 | INFO     | . get job = 0 s
[2024-04-28 02:42:43] 2024-04-28 00:42:21,913 | INFO     | . initial setup = 1 s
[2024-04-28 02:42:43] 2024-04-28 00:42:21,913 | INFO     | . payload setup = 6 s
[2024-04-28 02:42:43] 2024-04-28 00:42:21,913 | INFO     | . stage-in = 0 s
[2024-04-28 02:42:43] 2024-04-28 00:42:21,914 | INFO     | . payload execution = 15187 s
[2024-04-28 02:42:43] 2024-04-28 00:42:21,914 | INFO     | . stage-out = 0 s
[2024-04-28 02:42:43] 2024-04-28 00:42:21,914 | INFO     | . log creation = 0 s
[2024-04-28 02:42:43] 2024-04-28 00:42:21,914 | INFO     | ..............................
[2024-04-28 02:42:43] 2024-04-28 00:42:22,307 | INFO     | 
[2024-04-28 02:42:43] 2024-04-28 00:42:22,307 | INFO     | job summary report
[2024-04-28 02:42:43] 2024-04-28 00:42:22,307 | INFO     | --------------------------------------------------
[2024-04-28 02:42:43] 2024-04-28 00:42:22,307 | INFO     | PanDA job id: 6186189811
[2024-04-28 02:42:43] 2024-04-28 00:42:22,307 | INFO     | task id: 38204311
[2024-04-28 02:42:43] 2024-04-28 00:42:22,307 | INFO     | errors: (none)
[2024-04-28 02:42:43] 2024-04-28 00:42:22,307 | INFO     | status: LOG_TRANSFER = DONE 
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | pilot state: finished 
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | transexitcode: 0
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | exeerrorcode: 0
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | exeerrordiag: 
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | exitcode: 0
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | exitmsg: OK
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | cpuconsumptiontime: 57913 s
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | nevents: 400
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | neventsw: 0
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | pid: 3141992
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | pgrp: 3141992
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | corecount: 4
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | event service: False
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | sizes: {0: 2375666, 5: 2375872, 11: 2375928, 15197: 2406742, 15198: 2415780, 15207: 2415894}
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | --------------------------------------------------
[2024-04-28 02:42:43] 2024-04-28 00:42:22,308 | INFO     | 
[2024-04-28 02:42:43] 2024-04-28 00:42:22,309 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-04-28 02:42:43] 2024-04-28 00:42:22,326 | INFO     | queue jobs had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,326 | INFO     | queue payloads had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,326 | INFO     | queue data_in had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,326 | INFO     | queue data_out had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,327 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,327 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,327 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,327 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,327 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,327 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,327 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,328 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,328 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,328 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,328 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,328 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,328 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,328 | INFO     | queue completed_jobids has 1 job(s)
[2024-04-28 02:42:43] 2024-04-28 00:42:22,328 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,329 | INFO     | queue messages had 0 job(s) [purged]
[2024-04-28 02:42:43] 2024-04-28 00:42:22,329 | INFO     | job 6186189811 has completed (purged errors)
[2024-04-28 02:42:43] 2024-04-28 00:42:22,329 | INFO     | overall cleanup function is called
[2024-04-28 02:42:43] 2024-04-28 00:42:23,336 | INFO     | --- collectZombieJob: --- 10, [3141992]
[2024-04-28 02:42:43] 2024-04-28 00:42:23,337 | INFO     | zombie collector waiting for pid 3141992
[2024-04-28 02:42:43] 2024-04-28 00:42:23,337 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-04-28 02:42:43] 2024-04-28 00:42:24,341 | INFO     | collected zombie processes
[2024-04-28 02:42:43] 2024-04-28 00:42:24,341 | INFO     | will now attempt to kill all subprocesses of pid=3141992
[2024-04-28 02:42:43] 2024-04-28 00:42:24,432 | INFO     | process IDs to be killed: [3141992] (in reverse order)
[2024-04-28 02:42:43] 2024-04-28 00:42:24,491 | WARNING  | found no corresponding commands to process id(s)
[2024-04-28 02:42:43] 2024-04-28 00:42:24,492 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-04-28 02:42:43] 2024-04-28 00:42:24,496 | INFO     | did not find any defunct processes belonging to 3141992
[2024-04-28 02:42:43] 2024-04-28 00:42:24,499 | INFO     | did not find any defunct processes belonging to 3141992
[2024-04-28 02:42:43] 2024-04-28 00:42:24,499 | INFO     | ready for new job
[2024-04-28 02:42:43] 2024-04-28 00:42:24,499 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-04-28 02:42:43] 2024-04-28 00:42:24,501 | INFO     | *************************************
[2024-04-28 02:42:43] 2024-04-28 00:42:24,501 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-04-28 02:42:43] 2024-04-28 00:42:24,501 | INFO     | *************************************
[2024-04-28 02:42:43] 2024-04-28 00:42:24,501 | INFO     | 
[2024-04-28 02:42:43] 2024-04-28 00:42:24,502 | INFO     | architecture information:
[2024-04-28 02:42:43] 2024-04-28 00:42:24,502 | INFO     | executing command: cat /etc/os-release
[2024-04-28 02:42:43] 2024-04-28 00:42:24,512 | INFO     | cat /etc/os-release:
[2024-04-28 02:42:43] NAME="CentOS Linux"
[2024-04-28 02:42:43] VERSION="7 (Core)"
[2024-04-28 02:42:43] ID="centos"
[2024-04-28 02:42:43] ID_LIKE="rhel fedora"
[2024-04-28 02:42:43] VERSION_ID="7"
[2024-04-28 02:42:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-04-28 02:42:43] ANSI_COLOR="0;31"
[2024-04-28 02:42:43] CPE_NAME="cpe:/o:centos:centos:7"
[2024-04-28 02:42:43] HOME_URL="https://www.centos.org/"
[2024-04-28 02:42:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-04-28 02:42:43] 
[2024-04-28 02:42:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-04-28 02:42:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-04-28 02:42:43] REDHAT_SUPPORT_PRODUCT="centos"
[2024-04-28 02:42:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-04-28 02:42:43] 
[2024-04-28 02:42:43] 2024-04-28 00:42:24,512 | INFO     | *************************************
[2024-04-28 02:42:43] 2024-04-28 00:42:25,014 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-04-28 02:42:43] 2024-04-28 00:42:25,033 | INFO     | sufficient remaining disk space (1635355983872 B)
[2024-04-28 02:42:43] 2024-04-28 00:42:25,034 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-04-28 02:42:43] 2024-04-28 00:42:25,034 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-04-28 02:42:43] 2024-04-28 00:42:25,034 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-04-28 02:42:43] 2024-04-28 00:42:25,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-04-28 02:42:43] 2024-04-28 00:42:25,035 | INFO     | found 0 job(s) in 20 queues
[2024-04-28 02:42:43] 2024-04-28 00:42:25,035 | INFO     | aborting loop
[2024-04-28 02:42:43] 2024-04-28 00:42:25,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-04-28 02:42:43] 2024-04-28 00:42:25,036 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-04-28 02:42:43] 2024-04-28 00:42:25,395 | INFO     | all data control threads have been joined
[2024-04-28 02:42:43] 2024-04-28 00:42:25,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-04-28 02:42:43] 2024-04-28 00:42:25,677 | INFO     | all payload control threads have been joined
[2024-04-28 02:42:43] 2024-04-28 00:42:25,790 | INFO     | all job control threads have been joined
[2024-04-28 02:42:43] 2024-04-28 00:42:26,039 | INFO     | [job] retrieve thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:26,040 | INFO     | [job] job monitor thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:26,391 | INFO     | [data] copytool_in thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:26,398 | INFO     | [data] control thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:26,555 | INFO     | [job] create_data_payload thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:26,682 | INFO     | [payload] control thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:26,699 | INFO     | [job] validate thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:26,795 | INFO     | [job] control thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:27,004 | INFO     | [payload] validate_post thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:27,017 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-04-28 02:42:43] 2024-04-28 00:42:27,043 | INFO     | [payload] validate_pre thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:27,486 | INFO     | [payload] execute_payloads thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:27,502 | INFO     | [payload] failed_post thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:27,548 | INFO     | [data] copytool_out thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:28,022 | INFO     | [job] queue monitor thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:28,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-04-28 02:42:43] 2024-04-28 00:42:32,209 | INFO     | [data] queue_monitor thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:35,773 | INFO     | job.realtimelogging is not enabled
[2024-04-28 02:42:43] 2024-04-28 00:42:36,778 | INFO     | [payload] run_realtimelog thread has finished
[2024-04-28 02:42:43] 2024-04-28 00:42:37,870 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47036873253952)>', '<ExcThread(monitor, started 47037044487936)>']
[2024-04-28 02:42:43] 2024-04-28 00:42:38,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-04-28 02:42:43] 2024-04-28 00:42:38,098 | INFO     | [monitor] control thread has ended
[2024-04-28 02:42:43] 2024-04-28 00:42:42,894 | INFO     | all workflow threads have been joined
[2024-04-28 02:42:43] 2024-04-28 00:42:42,894 | INFO     | end of generic workflow (traces error code: 0)
[2024-04-28 02:42:43] 2024-04-28 00:42:42,894 | INFO     | traces error code: 0
[2024-04-28 02:42:43] 2024-04-28 00:42:42,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-04-28 02:42:43] 2024-04-28 00:42:42,961 [wrapper] ==== pilot stdout END ====
[2024-04-28 02:42:43] 2024-04-28 00:42:42,963 [wrapper] ==== wrapper stdout RESUME ====
[2024-04-28 02:42:43] 2024-04-28 00:42:42,965 [wrapper] pilotpid: 3135149
[2024-04-28 02:42:43] 2024-04-28 00:42:42,967 [wrapper] Pilot exit status: 0
[2024-04-28 02:42:43] 2024-04-28 00:42:42,975 [wrapper] pandaids: 6186189811
[2024-04-28 02:42:43] 2024-04-28 00:42:43,034 [wrapper] cleanup: SIGTERM to supervisor_pilot 3571807 3135150
[2024-04-28 02:42:43] 2024-04-28 00:42:43,036 [wrapper] Test setup, not cleaning
[2024-04-28 02:42:43] 2024-04-28 00:42:43,038 [wrapper] ==== wrapper stdout END ====
[2024-04-28 02:42:43] 2024-04-28 00:42:43,040 [wrapper] ==== wrapper stderr END ====
[2024-04-28 02:42:43] 2024-04-28 00:42:43,044 [wrapper] apfmon messages muted
[2024-04-28 02:42:43]  *** Error codes and diagnostics ***
[2024-04-28 02:42:43]     "exeErrorCode": 0,
[2024-04-28 02:42:43]     "exeErrorDiag": "",
[2024-04-28 02:42:43]     "pilotErrorCode": 0,
[2024-04-28 02:42:43]     "pilotErrorDiag": "",
[2024-04-28 02:42:43]  *** Listing of results directory ***
[2024-04-28 02:42:43] total 618648
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc    462745 Apr 25 11:48 pilot3.tar.gz
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc      6173 Apr 25 11:49 queuedata.json
[2024-04-28 02:42:43] -rwx------ 1 boinc boinc     32211 Apr 25 11:49 runpilot2-wrapper.sh
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc       100 Apr 27 22:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-04-28 02:42:43] -rwxr-xr-x 1 boinc boinc      7986 Apr 27 22:28 run_atlas
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc       105 Apr 27 22:28 job.xml
[2024-04-28 02:42:43] -rw-r--r-- 2 boinc boinc 453076041 Apr 27 22:28 EVNT.38204309._000224.pool.root.1
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc      6455 Apr 27 22:28 init_data.xml
[2024-04-28 02:42:43] -rw-r--r-- 2 boinc boinc     17537 Apr 27 22:28 start_atlas.sh
[2024-04-28 02:42:43] drwxrwx--x 2 boinc boinc      4096 Apr 27 22:28 shared
[2024-04-28 02:42:43] -rw-r--r-- 2 boinc boinc    474781 Apr 27 22:28 input.tar.gz
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc         0 Apr 27 22:28 boinc_lockfile
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc      2607 Apr 27 22:28 pandaJob.out
[2024-04-28 02:42:43] -rw------- 1 boinc boinc       424 Apr 27 22:28 setup.sh.local
[2024-04-28 02:42:43] -rw------- 1 boinc boinc    997146 Apr 27 22:28 agis_schedconf.cvmfs.json
[2024-04-28 02:42:43] -rw------- 1 boinc boinc   1315307 Apr 27 22:28 cric_ddmendpoints.json
[2024-04-28 02:42:43] drwx------ 4 boinc boinc      4096 Apr 27 22:28 pilot3
[2024-04-28 02:42:43] -rw------- 1 boinc boinc        95 Apr 28 02:41 pilot_heartbeat.json
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc       532 Apr 28 02:41 boinc_task_state.xml
[2024-04-28 02:42:43] -rw------- 1 boinc boinc 173390419 Apr 28 02:41 HITS.38204311._004845.pool.root.1
[2024-04-28 02:42:43] -rw------- 1 boinc boinc      1062 Apr 28 02:42 memory_monitor_summary.json
[2024-04-28 02:42:43] -rw------- 1 boinc boinc         0 Apr 28 02:42 agis_ddmendpoints.agis.ALL.json
[2024-04-28 02:42:43] -rw------- 1 boinc boinc    338906 Apr 28 02:42 log.38204311._004845.job.log.tgz.1
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc        28 Apr 28 02:42 wrapper_checkpoint.txt
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc      8192 Apr 28 02:42 boinc_mmap_file
[2024-04-28 02:42:43] -rw------- 1 boinc boinc      7742 Apr 28 02:42 heartbeat.json
[2024-04-28 02:42:43] -rw------- 1 boinc boinc      4417 Apr 28 02:42 pilotlog.txt
[2024-04-28 02:42:43] -rw------- 1 boinc boinc   1429274 Apr 28 02:42 log.38204311._004845.job.log.1
[2024-04-28 02:42:43] -rw------- 1 boinc boinc       357 Apr 28 02:42 output.list
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc       620 Apr 28 02:42 runtime_log
[2024-04-28 02:42:43] -rw------- 1 boinc boinc   1792000 Apr 28 02:42 result.tar.gz
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc     11410 Apr 28 02:42 runtime_log.err
[2024-04-28 02:42:43] -rw------- 1 boinc boinc       659 Apr 28 02:42 WkJMDmVuAK5n9Rq4apoT9bVoABFKDmABFKDmtztZDmy9NKDmpLAEZn.diag
[2024-04-28 02:42:43] -rw-r--r-- 1 boinc boinc     21580 Apr 28 02:42 stderr.txt
[2024-04-28 02:42:43] HITS file was successfully produced:
[2024-04-28 02:42:43] -rw------- 1 boinc boinc 173390419 Apr 28 02:41 shared/HITS.pool.root.1
[2024-04-28 02:42:43]  *** Contents of shared directory: ***
[2024-04-28 02:42:43] total 614032
[2024-04-28 02:42:43] -rw-r--r-- 2 boinc boinc 453076041 Apr 27 22:28 ATLAS.root_0
[2024-04-28 02:42:43] -rw-r--r-- 2 boinc boinc     17537 Apr 27 22:28 start_atlas.sh
[2024-04-28 02:42:43] -rw-r--r-- 2 boinc boinc    474781 Apr 27 22:28 input.tar.gz
[2024-04-28 02:42:43] -rw------- 1 boinc boinc 173390419 Apr 28 02:41 HITS.pool.root.1
[2024-04-28 02:42:43] -rw------- 1 boinc boinc   1792000 Apr 28 02:42 result.tar.gz
02:42:45 (3130868): run_atlas exited; CPU time 57672.270916
02:42:45 (3130868): called boinc_finish(0)

</stderr_txt>
]]>

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